[1] "ofn"        "-oTSTES-TP"
[1] "opt"       "-OPMUTSIG"
[1] "tl" ""  
[1] "dx" ""  
[1] "opt"    "MUTSIG"
[1] "dx" ""  
[1] "cfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/STES-TP/22555833/STES-TP.transferedmergedcluster.txt"
[1] "dfn:"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/STES-TP/22815584/transformed.cor.cli.txt"

nPatients in clinical file=628, in cluster file=578, common to both=578
[1] "Reduce the number of clustering variables from 1268 to 1267."
[1] 1267  578
[1] "TP53 MUTATION ANALYSIS"
[1] 3
  TP53 MUTATED TP53 WILD-TYPE 
           341            237 
  TP53 MUTATED TP53 WILD-TYPE 
           341            237 
[1] "ARID1A MUTATION ANALYSIS"
[1] 3
  ARID1A MUTATED ARID1A WILD-TYPE 
             114              464 
  ARID1A MUTATED ARID1A WILD-TYPE 
             114              464 
[1] "MLL2 MUTATION ANALYSIS"
[1] 3
  MLL2 MUTATED MLL2 WILD-TYPE 
            99            479 
  MLL2 MUTATED MLL2 WILD-TYPE 
            99            479 
[1] "RNF43 MUTATION ANALYSIS"
[1] 3
  RNF43 MUTATED RNF43 WILD-TYPE 
             47             531 
  RNF43 MUTATED RNF43 WILD-TYPE 
             47             531 
[1] "SMAD4 MUTATION ANALYSIS"
[1] 3
  SMAD4 MUTATED SMAD4 WILD-TYPE 
             41             537 
  SMAD4 MUTATED SMAD4 WILD-TYPE 
             41             537 
[1] "KRAS MUTATION ANALYSIS"
[1] 3
  KRAS MUTATED KRAS WILD-TYPE 
            40            538 
  KRAS MUTATED KRAS WILD-TYPE 
            40            538 
[1] "XYLT2 MUTATION ANALYSIS"
[1] 3
  XYLT2 MUTATED XYLT2 WILD-TYPE 
             40             538 
  XYLT2 MUTATED XYLT2 WILD-TYPE 
             40             538 
[1] "PTEN MUTATION ANALYSIS"
[1] 3
  PTEN MUTATED PTEN WILD-TYPE 
            37            541 
  PTEN MUTATED PTEN WILD-TYPE 
            37            541 
[1] "LARP4B MUTATION ANALYSIS"
[1] 3
  LARP4B MUTATED LARP4B WILD-TYPE 
              34              544 
  LARP4B MUTATED LARP4B WILD-TYPE 
              34              544 
[1] "FBXW7 MUTATION ANALYSIS"
[1] 3
  FBXW7 MUTATED FBXW7 WILD-TYPE 
             45             533 
  FBXW7 MUTATED FBXW7 WILD-TYPE 
             45             533 
[1] "RHOA MUTATION ANALYSIS"
[1] 3
  RHOA MUTATED RHOA WILD-TYPE 
            22            556 
  RHOA MUTATED RHOA WILD-TYPE 
            22            556 
[1] "B2M MUTATION ANALYSIS"
[1] 3
  B2M MUTATED B2M WILD-TYPE 
           20           558 
  B2M MUTATED B2M WILD-TYPE 
           20           558 
[1] "HLA-B MUTATION ANALYSIS"
[1] 3
  HLA-B MUTATED HLA-B WILD-TYPE 
             35             543 
  HLA-B MUTATED HLA-B WILD-TYPE 
             35             543 
[1] "C7ORF50 MUTATION ANALYSIS"
[1] 3
  C7ORF50 MUTATED C7ORF50 WILD-TYPE 
               13               565 
  C7ORF50 MUTATED C7ORF50 WILD-TYPE 
               13               565 
[1] "GNG12 MUTATION ANALYSIS"
[1] 3
  GNG12 MUTATED GNG12 WILD-TYPE 
             12             566 
  GNG12 MUTATED GNG12 WILD-TYPE 
             12             566 
[1] "PLEKHA6 MUTATION ANALYSIS"
[1] 3
  PLEKHA6 MUTATED PLEKHA6 WILD-TYPE 
               28               550 
  PLEKHA6 MUTATED PLEKHA6 WILD-TYPE 
               28               550 
[1] "PGM5 MUTATION ANALYSIS"
[1] 3
  PGM5 MUTATED PGM5 WILD-TYPE 
            43            535 
  PGM5 MUTATED PGM5 WILD-TYPE 
            43            535 
[1] "MLL4 MUTATION ANALYSIS"
[1] 3
  MLL4 MUTATED MLL4 WILD-TYPE 
            53            525 
  MLL4 MUTATED MLL4 WILD-TYPE 
            53            525 
[1] "KLF3 MUTATION ANALYSIS"
[1] 3
  KLF3 MUTATED KLF3 WILD-TYPE 
            22            556 
  KLF3 MUTATED KLF3 WILD-TYPE 
            22            556 
[1] "ZBTB20 MUTATION ANALYSIS"
[1] 3
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
              42              536 
  ZBTB20 MUTATED ZBTB20 WILD-TYPE 
              42              536 
[1] "MBD6 MUTATION ANALYSIS"
[1] 3
  MBD6 MUTATED MBD6 WILD-TYPE 
            25            553 
  MBD6 MUTATED MBD6 WILD-TYPE 
            25            553 
[1] "MUC6 MUTATION ANALYSIS"
[1] 3
  MUC6 MUTATED MUC6 WILD-TYPE 
            59            519 
  MUC6 MUTATED MUC6 WILD-TYPE 
            59            519 
[1] "CBWD1 MUTATION ANALYSIS"
[1] 3
  CBWD1 MUTATED CBWD1 WILD-TYPE 
             22             556 
  CBWD1 MUTATED CBWD1 WILD-TYPE 
             22             556 
[1] "CTNND1 MUTATION ANALYSIS"
[1] 3
  CTNND1 MUTATED CTNND1 WILD-TYPE 
              33              545 
  CTNND1 MUTATED CTNND1 WILD-TYPE 
              33              545 
[1] "APC MUTATION ANALYSIS"
[1] 3
  APC MUTATED APC WILD-TYPE 
           62           516 
  APC MUTATED APC WILD-TYPE 
           62           516 
[1] "LARP7 MUTATION ANALYSIS"
[1] 3
  LARP7 MUTATED LARP7 WILD-TYPE 
             22             556 
  LARP7 MUTATED LARP7 WILD-TYPE 
             22             556 
[1] "DDX17 MUTATION ANALYSIS"
[1] 3
  DDX17 MUTATED DDX17 WILD-TYPE 
             17             561 
  DDX17 MUTATED DDX17 WILD-TYPE 
             17             561 
[1] "CIC MUTATION ANALYSIS"
[1] 3
  CIC MUTATED CIC WILD-TYPE 
           54           524 
  CIC MUTATED CIC WILD-TYPE 
           54           524 
[1] "TENC1 MUTATION ANALYSIS"
[1] 3
  TENC1 MUTATED TENC1 WILD-TYPE 
             23             555 
  TENC1 MUTATED TENC1 WILD-TYPE 
             23             555 
[1] "ARID4A MUTATION ANALYSIS"
[1] 3
  ARID4A MUTATED ARID4A WILD-TYPE 
              24              554 
  ARID4A MUTATED ARID4A WILD-TYPE 
              24              554 
[1] "CDH1 MUTATION ANALYSIS"
[1] 3
  CDH1 MUTATED CDH1 WILD-TYPE 
            33            545 
  CDH1 MUTATED CDH1 WILD-TYPE 
            33            545 
[1] "BCOR MUTATION ANALYSIS"
[1] 3
  BCOR MUTATED BCOR WILD-TYPE 
            31            547 
  BCOR MUTATED BCOR WILD-TYPE 
            31            547 
[1] "C14ORF43 MUTATION ANALYSIS"
[1] 3
  C14ORF43 MUTATED C14ORF43 WILD-TYPE 
                32                546 
  C14ORF43 MUTATED C14ORF43 WILD-TYPE 
                32                546 
[1] "ZBTB7C MUTATION ANALYSIS"
[1] 3
  ZBTB7C MUTATED ZBTB7C WILD-TYPE 
              17              561 
  ZBTB7C MUTATED ZBTB7C WILD-TYPE 
              17              561 
[1] "FRMD4A MUTATION ANALYSIS"
[1] 3
  FRMD4A MUTATED FRMD4A WILD-TYPE 
              28              550 
  FRMD4A MUTATED FRMD4A WILD-TYPE 
              28              550 
[1] "PAX6 MUTATION ANALYSIS"
[1] 3
  PAX6 MUTATED PAX6 WILD-TYPE 
            22            556 
  PAX6 MUTATED PAX6 WILD-TYPE 
            22            556 
[1] "PRSS36 MUTATION ANALYSIS"
[1] 3
  PRSS36 MUTATED PRSS36 WILD-TYPE 
              22              556 
  PRSS36 MUTATED PRSS36 WILD-TYPE 
              22              556 
[1] "CDKN2A MUTATION ANALYSIS"
[1] 3
  CDKN2A MUTATED CDKN2A WILD-TYPE 
              35              543 
  CDKN2A MUTATED CDKN2A WILD-TYPE 
              35              543 
[1] "MVK MUTATION ANALYSIS"
[1] 3
  MVK MUTATED MVK WILD-TYPE 
           16           562 
  MVK MUTATED MVK WILD-TYPE 
           16           562 
[1] "KIAA0406 MUTATION ANALYSIS"
[1] 3
  KIAA0406 MUTATED KIAA0406 WILD-TYPE 
                26                552 
  KIAA0406 MUTATED KIAA0406 WILD-TYPE 
                26                552 
[1] "KIAA1967 MUTATION ANALYSIS"
[1] 3
  KIAA1967 MUTATED KIAA1967 WILD-TYPE 
                26                552 
  KIAA1967 MUTATED KIAA1967 WILD-TYPE 
                26                552 
[1] "ZMYM4 MUTATION ANALYSIS"
[1] 3
  ZMYM4 MUTATED ZMYM4 WILD-TYPE 
             24             554 
  ZMYM4 MUTATED ZMYM4 WILD-TYPE 
             24             554 
[1] "LMAN1 MUTATION ANALYSIS"
[1] 3
  LMAN1 MUTATED LMAN1 WILD-TYPE 
             17             561 
  LMAN1 MUTATED LMAN1 WILD-TYPE 
             17             561 
[1] "TGFBR2 MUTATION ANALYSIS"
[1] 3
  TGFBR2 MUTATED TGFBR2 WILD-TYPE 
              31              547 
  TGFBR2 MUTATED TGFBR2 WILD-TYPE 
              31              547 
[1] "SNAPC1 MUTATION ANALYSIS"
[1] 3
  SNAPC1 MUTATED SNAPC1 WILD-TYPE 
              11              567 
  SNAPC1 MUTATED SNAPC1 WILD-TYPE 
              11              567 
[1] "FZD3 MUTATION ANALYSIS"
[1] 3
  FZD3 MUTATED FZD3 WILD-TYPE 
            12            566 
  FZD3 MUTATED FZD3 WILD-TYPE 
            12            566 
[1] "SCLT1 MUTATION ANALYSIS"
[1] 3
  SCLT1 MUTATED SCLT1 WILD-TYPE 
             20             558 
  SCLT1 MUTATED SCLT1 WILD-TYPE 
             20             558 
[1] "NWD1 MUTATION ANALYSIS"
[1] 3
  NWD1 MUTATED NWD1 WILD-TYPE 
            36            542 
  NWD1 MUTATED NWD1 WILD-TYPE 
            36            542 
[1] "CYP27B1 MUTATION ANALYSIS"
[1] 3
  CYP27B1 MUTATED CYP27B1 WILD-TYPE 
               11               567 
  CYP27B1 MUTATED CYP27B1 WILD-TYPE 
               11               567 
[1] "MTG1 MUTATION ANALYSIS"
[1] 3
  MTG1 MUTATED MTG1 WILD-TYPE 
            12            566 
  MTG1 MUTATED MTG1 WILD-TYPE 
            12            566 
[1] "PRRG1 MUTATION ANALYSIS"
[1] 3
  PRRG1 MUTATED PRRG1 WILD-TYPE 
             11             567 
  PRRG1 MUTATED PRRG1 WILD-TYPE 
             11             567 
[1] "KIAA1267 MUTATION ANALYSIS"
[1] 3
  KIAA1267 MUTATED KIAA1267 WILD-TYPE 
                23                555 
  KIAA1267 MUTATED KIAA1267 WILD-TYPE 
                23                555 
[1] "P4HTM MUTATION ANALYSIS"
[1] 3
  P4HTM MUTATED P4HTM WILD-TYPE 
             27             551 
  P4HTM MUTATED P4HTM WILD-TYPE 
             27             551 
[1] "CEP57 MUTATION ANALYSIS"
[1] 3
  CEP57 MUTATED CEP57 WILD-TYPE 
             13             565 
  CEP57 MUTATED CEP57 WILD-TYPE 
             13             565 
[1] "KRT75 MUTATION ANALYSIS"
[1] 3
  KRT75 MUTATED KRT75 WILD-TYPE 
             37             541 
  KRT75 MUTATED KRT75 WILD-TYPE 
             37             541 
[1] "FAHD2B MUTATION ANALYSIS"
[1] 3
  FAHD2B MUTATED FAHD2B WILD-TYPE 
              12              566 
  FAHD2B MUTATED FAHD2B WILD-TYPE 
              12              566 
[1] "DSTN MUTATION ANALYSIS"
[1] 3
  DSTN MUTATED DSTN WILD-TYPE 
             7            571 
  DSTN MUTATED DSTN WILD-TYPE 
             7            571 
[1] "ZFP36L2 MUTATION ANALYSIS"
[1] 3
  ZFP36L2 MUTATED ZFP36L2 WILD-TYPE 
               15               563 
  ZFP36L2 MUTATED ZFP36L2 WILD-TYPE 
               15               563 
[1] "RNF128 MUTATION ANALYSIS"
[1] 3
  RNF128 MUTATED RNF128 WILD-TYPE 
              15              563 
  RNF128 MUTATED RNF128 WILD-TYPE 
              15              563 
[1] "FHOD3 MUTATION ANALYSIS"
[1] 3
  FHOD3 MUTATED FHOD3 WILD-TYPE 
             36             542 
  FHOD3 MUTATED FHOD3 WILD-TYPE 
             36             542 
[1] "OSBP2 MUTATION ANALYSIS"
[1] 3
  OSBP2 MUTATED OSBP2 WILD-TYPE 
             15             563 
  OSBP2 MUTATED OSBP2 WILD-TYPE 
             15             563 
[1] "NFASC MUTATION ANALYSIS"
[1] 3
  NFASC MUTATED NFASC WILD-TYPE 
             37             541 
  NFASC MUTATED NFASC WILD-TYPE 
             37             541 
[1] "EPB49 MUTATION ANALYSIS"
[1] 3
  EPB49 MUTATED EPB49 WILD-TYPE 
             17             561 
  EPB49 MUTATED EPB49 WILD-TYPE 
             17             561 
[1] "WNT1 MUTATION ANALYSIS"
[1] 3
  WNT1 MUTATED WNT1 WILD-TYPE 
            11            567 
  WNT1 MUTATED WNT1 WILD-TYPE 
            11            567 
[1] "ATXN2L MUTATION ANALYSIS"
[1] 3
  ATXN2L MUTATED ATXN2L WILD-TYPE 
              25              553 
  ATXN2L MUTATED ATXN2L WILD-TYPE 
              25              553 
[1] "C9ORF131 MUTATION ANALYSIS"
[1] 3
  C9ORF131 MUTATED C9ORF131 WILD-TYPE 
                24                554 
  C9ORF131 MUTATED C9ORF131 WILD-TYPE 
                24                554 
[1] "MFRP MUTATION ANALYSIS"
[1] 3
  MFRP MUTATED MFRP WILD-TYPE 
            18            560 
  MFRP MUTATED MFRP WILD-TYPE 
            18            560 
[1] "WASF3 MUTATION ANALYSIS"
[1] 3
  WASF3 MUTATED WASF3 WILD-TYPE 
             22             556 
  WASF3 MUTATED WASF3 WILD-TYPE 
             22             556 
[1] "ADAM30 MUTATION ANALYSIS"
[1] 3
  ADAM30 MUTATED ADAM30 WILD-TYPE 
              19              559 
  ADAM30 MUTATED ADAM30 WILD-TYPE 
              19              559 
[1] "HOXD8 MUTATION ANALYSIS"
[1] 3
  HOXD8 MUTATED HOXD8 WILD-TYPE 
             14             564 
  HOXD8 MUTATED HOXD8 WILD-TYPE 
             14             564 
[1] "PAFAH1B1 MUTATION ANALYSIS"
[1] 3
  PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE 
                16                562 
  PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE 
                16                562 
[1] "PAX2 MUTATION ANALYSIS"
[1] 3
  PAX2 MUTATED PAX2 WILD-TYPE 
            12            566 
  PAX2 MUTATED PAX2 WILD-TYPE 
            12            566 
[1] "INPPL1 MUTATION ANALYSIS"
[1] 3
  INPPL1 MUTATED INPPL1 WILD-TYPE 
              26              552 
  INPPL1 MUTATED INPPL1 WILD-TYPE 
              26              552 
[1] "MCM8 MUTATION ANALYSIS"
[1] 3
  MCM8 MUTATED MCM8 WILD-TYPE 
            26            552 
  MCM8 MUTATED MCM8 WILD-TYPE 
            26            552 
[1] "NLK MUTATION ANALYSIS"
[1] 3
  NLK MUTATED NLK WILD-TYPE 
           18           560 
  NLK MUTATED NLK WILD-TYPE 
           18           560 
[1] "NFE2L2 MUTATION ANALYSIS"
[1] 3
  NFE2L2 MUTATED NFE2L2 WILD-TYPE 
              18              560 
  NFE2L2 MUTATED NFE2L2 WILD-TYPE 
              18              560 
[1] "NBN MUTATION ANALYSIS"
[1] 3
  NBN MUTATED NBN WILD-TYPE 
           20           558 
  NBN MUTATED NBN WILD-TYPE 
           20           558 
[1] "GLI1 MUTATION ANALYSIS"
[1] 3
  GLI1 MUTATED GLI1 WILD-TYPE 
            25            553 
  GLI1 MUTATED GLI1 WILD-TYPE 
            25            553 
[1] "FAM9A MUTATION ANALYSIS"
[1] 3
  FAM9A MUTATED FAM9A WILD-TYPE 
             13             565 
  FAM9A MUTATED FAM9A WILD-TYPE 
             13             565 
[1] "HDAC4 MUTATION ANALYSIS"
[1] 3
  HDAC4 MUTATED HDAC4 WILD-TYPE 
             37             541 
  HDAC4 MUTATED HDAC4 WILD-TYPE 
             37             541 
[1] "MOBKL1A MUTATION ANALYSIS"
[1] 3
  MOBKL1A MUTATED MOBKL1A WILD-TYPE 
                7               571 
  MOBKL1A MUTATED MOBKL1A WILD-TYPE 
                7               571 
[1] "KIAA0664 MUTATION ANALYSIS"
[1] 3
  KIAA0664 MUTATED KIAA0664 WILD-TYPE 
                27                551 
  KIAA0664 MUTATED KIAA0664 WILD-TYPE 
                27                551 
[1] "CR2 MUTATION ANALYSIS"
[1] 3
  CR2 MUTATED CR2 WILD-TYPE 
           27           551 
  CR2 MUTATED CR2 WILD-TYPE 
           27           551 
[1] "RTN2 MUTATION ANALYSIS"
[1] 3
  RTN2 MUTATED RTN2 WILD-TYPE 
            18            560 
  RTN2 MUTATED RTN2 WILD-TYPE 
            18            560 
[1] "ABCC4 MUTATION ANALYSIS"
[1] 3
  ABCC4 MUTATED ABCC4 WILD-TYPE 
             25             553 
  ABCC4 MUTATED ABCC4 WILD-TYPE 
             25             553 
[1] "ALDH2 MUTATION ANALYSIS"
[1] 3
  ALDH2 MUTATED ALDH2 WILD-TYPE 
             15             563 
  ALDH2 MUTATED ALDH2 WILD-TYPE 
             15             563 
[1] "IWS1 MUTATION ANALYSIS"
[1] 3
  IWS1 MUTATED IWS1 WILD-TYPE 
            16            562 
  IWS1 MUTATED IWS1 WILD-TYPE 
            16            562 
[1] "SLC12A9 MUTATION ANALYSIS"
[1] 3
  SLC12A9 MUTATED SLC12A9 WILD-TYPE 
               21               557 
  SLC12A9 MUTATED SLC12A9 WILD-TYPE 
               21               557 
[1] "IL2RG MUTATION ANALYSIS"
[1] 3
  IL2RG MUTATED IL2RG WILD-TYPE 
             13             565 
  IL2RG MUTATED IL2RG WILD-TYPE 
             13             565 
[1] "YY1 MUTATION ANALYSIS"
[1] 3
  YY1 MUTATED YY1 WILD-TYPE 
           12           566 
  YY1 MUTATED YY1 WILD-TYPE 
           12           566 
[1] "OPTN MUTATION ANALYSIS"
[1] 3
  OPTN MUTATED OPTN WILD-TYPE 
            16            562 
  OPTN MUTATED OPTN WILD-TYPE 
            16            562 
[1] "GRK4 MUTATION ANALYSIS"
[1] 3
  GRK4 MUTATED GRK4 WILD-TYPE 
            13            565 
  GRK4 MUTATED GRK4 WILD-TYPE 
            13            565 
[1] "CTCF MUTATION ANALYSIS"
[1] 3
  CTCF MUTATED CTCF WILD-TYPE 
            16            562 
  CTCF MUTATED CTCF WILD-TYPE 
            16            562 
[1] "EIF5B MUTATION ANALYSIS"
[1] 3
  EIF5B MUTATED EIF5B WILD-TYPE 
             31             547 
  EIF5B MUTATED EIF5B WILD-TYPE 
             31             547 
[1] "RTKN2 MUTATION ANALYSIS"
[1] 3
  RTKN2 MUTATED RTKN2 WILD-TYPE 
             14             564 
  RTKN2 MUTATED RTKN2 WILD-TYPE 
             14             564 
[1] "ZNF48 MUTATION ANALYSIS"
[1] 3
  ZNF48 MUTATED ZNF48 WILD-TYPE 
             13             565 
  ZNF48 MUTATED ZNF48 WILD-TYPE 
             13             565 
[1] "INF2 MUTATION ANALYSIS"
[1] 3
  INF2 MUTATED INF2 WILD-TYPE 
            26            552 
  INF2 MUTATED INF2 WILD-TYPE 
            26            552 
[1] "NAPEPLD MUTATION ANALYSIS"
[1] 3
  NAPEPLD MUTATED NAPEPLD WILD-TYPE 
               12               566 
  NAPEPLD MUTATED NAPEPLD WILD-TYPE 
               12               566 
[1] "ELF3 MUTATION ANALYSIS"
[1] 3
  ELF3 MUTATED ELF3 WILD-TYPE 
            14            564 
  ELF3 MUTATED ELF3 WILD-TYPE 
            14            564 
[1] "TTF1 MUTATION ANALYSIS"
[1] 3
  TTF1 MUTATED TTF1 WILD-TYPE 
            20            558 
  TTF1 MUTATED TTF1 WILD-TYPE 
            20            558 
[1] "DDC MUTATION ANALYSIS"
[1] 3
  DDC MUTATED DDC WILD-TYPE 
           12           566 
  DDC MUTATED DDC WILD-TYPE 
           12           566 
[1] "KLHDC5 MUTATION ANALYSIS"
[1] 3
  KLHDC5 MUTATED KLHDC5 WILD-TYPE 
              13              565 
  KLHDC5 MUTATED KLHDC5 WILD-TYPE 
              13              565 
[1] "FBXO21 MUTATION ANALYSIS"
[1] 3
  FBXO21 MUTATED FBXO21 WILD-TYPE 
              17              561 
  FBXO21 MUTATED FBXO21 WILD-TYPE 
              17              561 
[1] "IRF2 MUTATION ANALYSIS"
[1] 3
  IRF2 MUTATED IRF2 WILD-TYPE 
            19            559 
  IRF2 MUTATED IRF2 WILD-TYPE 
            19            559 
[1] "RHOQ MUTATION ANALYSIS"
[1] 3
  RHOQ MUTATED RHOQ WILD-TYPE 
             5            573 
  RHOQ MUTATED RHOQ WILD-TYPE 
             5            573 
[1] "GRINA MUTATION ANALYSIS"
[1] 3
  GRINA MUTATED GRINA WILD-TYPE 
             10             568 
  GRINA MUTATED GRINA WILD-TYPE 
             10             568 
[1] "EPHX1 MUTATION ANALYSIS"
[1] 3
  EPHX1 MUTATED EPHX1 WILD-TYPE 
             12             566 
  EPHX1 MUTATED EPHX1 WILD-TYPE 
             12             566 
[1] "C13ORF33 MUTATION ANALYSIS"
[1] 3
  C13ORF33 MUTATED C13ORF33 WILD-TYPE 
                 8                570 
  C13ORF33 MUTATED C13ORF33 WILD-TYPE 
                 8                570 
[1] "C19ORF40 MUTATION ANALYSIS"
[1] 3
  C19ORF40 MUTATED C19ORF40 WILD-TYPE 
                 7                571 
  C19ORF40 MUTATED C19ORF40 WILD-TYPE 
                 7                571 
[1] "MRE11A MUTATION ANALYSIS"
[1] 3
  MRE11A MUTATED MRE11A WILD-TYPE 
               9              569 
  MRE11A MUTATED MRE11A WILD-TYPE 
               9              569 
[1] "ERF MUTATION ANALYSIS"
[1] 3
  ERF MUTATED ERF WILD-TYPE 
           18           560 
  ERF MUTATED ERF WILD-TYPE 
           18           560 
[1] "GYLTL1B MUTATION ANALYSIS"
[1] 3
  GYLTL1B MUTATED GYLTL1B WILD-TYPE 
               19               559 
  GYLTL1B MUTATED GYLTL1B WILD-TYPE 
               19               559 
[1] "POLM MUTATION ANALYSIS"
[1] 3
  POLM MUTATED POLM WILD-TYPE 
            14            564 
  POLM MUTATED POLM WILD-TYPE 
            14            564 
[1] "HLA-A MUTATION ANALYSIS"
[1] 3
  HLA-A MUTATED HLA-A WILD-TYPE 
             20             558 
  HLA-A MUTATED HLA-A WILD-TYPE 
             20             558 
[1] "EIF4G3 MUTATION ANALYSIS"
[1] 3
  EIF4G3 MUTATED EIF4G3 WILD-TYPE 
              24              554 
  EIF4G3 MUTATED EIF4G3 WILD-TYPE 
              24              554 
[1] "CTNNB1 MUTATION ANALYSIS"
[1] 3
  CTNNB1 MUTATED CTNNB1 WILD-TYPE 
              33              545 
  CTNNB1 MUTATED CTNNB1 WILD-TYPE 
              33              545 
[1] "TMEM41A MUTATION ANALYSIS"
[1] 3
  TMEM41A MUTATED TMEM41A WILD-TYPE 
                9               569 
  TMEM41A MUTATED TMEM41A WILD-TYPE 
                9               569 
[1] "VPS13B MUTATION ANALYSIS"
[1] 3
  VPS13B MUTATED VPS13B WILD-TYPE 
              62              516 
  VPS13B MUTATED VPS13B WILD-TYPE 
              62              516 
[1] "PBRM1 MUTATION ANALYSIS"
[1] 3
  PBRM1 MUTATED PBRM1 WILD-TYPE 
             34             544 
  PBRM1 MUTATED PBRM1 WILD-TYPE 
             34             544 
[1] "ALPK2 MUTATION ANALYSIS"
[1] 3
  ALPK2 MUTATED ALPK2 WILD-TYPE 
             29             549 
  ALPK2 MUTATED ALPK2 WILD-TYPE 
             29             549 
[1] "MED15 MUTATION ANALYSIS"
[1] 3
  MED15 MUTATED MED15 WILD-TYPE 
             22             556 
  MED15 MUTATED MED15 WILD-TYPE 
             22             556 
[1] "TBC1D10C MUTATION ANALYSIS"
[1] 3
  TBC1D10C MUTATED TBC1D10C WILD-TYPE 
                10                568 
  TBC1D10C MUTATED TBC1D10C WILD-TYPE 
                10                568 
[1] "CDH16 MUTATION ANALYSIS"
[1] 3
  CDH16 MUTATED CDH16 WILD-TYPE 
             17             561 
  CDH16 MUTATED CDH16 WILD-TYPE 
             17             561 
[1] "ANAPC1 MUTATION ANALYSIS"
[1] 3
  ANAPC1 MUTATED ANAPC1 WILD-TYPE 
              21              557 
  ANAPC1 MUTATED ANAPC1 WILD-TYPE 
              21              557 
[1] "SLC9A11 MUTATION ANALYSIS"
[1] 3
  SLC9A11 MUTATED SLC9A11 WILD-TYPE 
               30               548 
  SLC9A11 MUTATED SLC9A11 WILD-TYPE 
               30               548 
[1] "C22ORF30 MUTATION ANALYSIS"
[1] 3
  C22ORF30 MUTATED C22ORF30 WILD-TYPE 
                11                567 
  C22ORF30 MUTATED C22ORF30 WILD-TYPE 
                11                567 
[1] "ANKRD34A MUTATION ANALYSIS"
[1] 3
  ANKRD34A MUTATED ANKRD34A WILD-TYPE 
                11                567 
  ANKRD34A MUTATED ANKRD34A WILD-TYPE 
                11                567 
[1] "WNK4 MUTATION ANALYSIS"
[1] 3
  WNK4 MUTATED WNK4 WILD-TYPE 
            26            552 
  WNK4 MUTATED WNK4 WILD-TYPE 
            26            552 
[1] "PLA2G1B MUTATION ANALYSIS"
[1] 3
  PLA2G1B MUTATED PLA2G1B WILD-TYPE 
                6               572 
  PLA2G1B MUTATED PLA2G1B WILD-TYPE 
                6               572 
[1] "ORC3L MUTATION ANALYSIS"
[1] 3
  ORC3L MUTATED ORC3L WILD-TYPE 
             14             564 
  ORC3L MUTATED ORC3L WILD-TYPE 
             14             564 
[1] "SLC9A10 MUTATION ANALYSIS"
[1] 3
  SLC9A10 MUTATED SLC9A10 WILD-TYPE 
               20               558 
  SLC9A10 MUTATED SLC9A10 WILD-TYPE 
               20               558 
[1] "ADAMDEC1 MUTATION ANALYSIS"
[1] 3
  ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE 
                15                563 
  ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE 
                15                563 
[1] "ASAP2 MUTATION ANALYSIS"
[1] 3
  ASAP2 MUTATED ASAP2 WILD-TYPE 
             21             557 
  ASAP2 MUTATED ASAP2 WILD-TYPE 
             21             557 
[1] "BCORL1 MUTATION ANALYSIS"
[1] 3
  BCORL1 MUTATED BCORL1 WILD-TYPE 
              27              551 
  BCORL1 MUTATED BCORL1 WILD-TYPE 
              27              551 
[1] "KCNJ10 MUTATION ANALYSIS"
[1] 3
  KCNJ10 MUTATED KCNJ10 WILD-TYPE 
              15              563 
  KCNJ10 MUTATED KCNJ10 WILD-TYPE 
              15              563 
[1] "WNT16 MUTATION ANALYSIS"
[1] 3
  WNT16 MUTATED WNT16 WILD-TYPE 
             14             564 
  WNT16 MUTATED WNT16 WILD-TYPE 
             14             564 
[1] "JARID2 MUTATION ANALYSIS"
[1] 3
  JARID2 MUTATED JARID2 WILD-TYPE 
              44              534 
  JARID2 MUTATED JARID2 WILD-TYPE 
              44              534 
[1] "SLC27A3 MUTATION ANALYSIS"
[1] 3
  SLC27A3 MUTATED SLC27A3 WILD-TYPE 
               11               567 
  SLC27A3 MUTATED SLC27A3 WILD-TYPE 
               11               567 
[1] "MICALCL MUTATION ANALYSIS"
[1] 3
  MICALCL MUTATED MICALCL WILD-TYPE 
               19               559 
  MICALCL MUTATED MICALCL WILD-TYPE 
               19               559 
[1] "KLHDC8B MUTATION ANALYSIS"
[1] 3
  KLHDC8B MUTATED KLHDC8B WILD-TYPE 
               11               567 
  KLHDC8B MUTATED KLHDC8B WILD-TYPE 
               11               567 
[1] "B3GNT5 MUTATION ANALYSIS"
[1] 3
  B3GNT5 MUTATED B3GNT5 WILD-TYPE 
              12              566 
  B3GNT5 MUTATED B3GNT5 WILD-TYPE 
              12              566 
[1] "SPTY2D1 MUTATION ANALYSIS"
[1] 3
  SPTY2D1 MUTATED SPTY2D1 WILD-TYPE 
               21               557 
  SPTY2D1 MUTATED SPTY2D1 WILD-TYPE 
               21               557 
[1] "TP53BP2 MUTATION ANALYSIS"
[1] 3
  TP53BP2 MUTATED TP53BP2 WILD-TYPE 
               18               560 
  TP53BP2 MUTATED TP53BP2 WILD-TYPE 
               18               560 
[1] "HDLBP MUTATION ANALYSIS"
[1] 3
  HDLBP MUTATED HDLBP WILD-TYPE 
             40             538 
  HDLBP MUTATED HDLBP WILD-TYPE 
             40             538 
[1] "SYNJ1 MUTATION ANALYSIS"
[1] 3
  SYNJ1 MUTATED SYNJ1 WILD-TYPE 
             18             560 
  SYNJ1 MUTATED SYNJ1 WILD-TYPE 
             18             560 
[1] "PIGT MUTATION ANALYSIS"
[1] 3
  PIGT MUTATED PIGT WILD-TYPE 
            15            563 
  PIGT MUTATED PIGT WILD-TYPE 
            15            563 
[1] "TRIP4 MUTATION ANALYSIS"
[1] 3
  TRIP4 MUTATED TRIP4 WILD-TYPE 
             14             564 
  TRIP4 MUTATED TRIP4 WILD-TYPE 
             14             564 
[1] "SGOL2 MUTATION ANALYSIS"
[1] 3
  SGOL2 MUTATED SGOL2 WILD-TYPE 
             17             561 
  SGOL2 MUTATED SGOL2 WILD-TYPE 
             17             561 
[1] "ARID2 MUTATION ANALYSIS"
[1] 3
  ARID2 MUTATED ARID2 WILD-TYPE 
             33             545 
  ARID2 MUTATED ARID2 WILD-TYPE 
             33             545 
[1] "MTMR9 MUTATION ANALYSIS"
[1] 3
  MTMR9 MUTATED MTMR9 WILD-TYPE 
             18             560 
  MTMR9 MUTATED MTMR9 WILD-TYPE 
             18             560 
[1] "CR1L MUTATION ANALYSIS"
[1] 3
  CR1L MUTATED CR1L WILD-TYPE 
            17            561 
  CR1L MUTATED CR1L WILD-TYPE 
            17            561 
[1] "YIPF2 MUTATION ANALYSIS"
[1] 3
  YIPF2 MUTATED YIPF2 WILD-TYPE 
             10             568 
  YIPF2 MUTATED YIPF2 WILD-TYPE 
             10             568 
[1] "ITGA6 MUTATION ANALYSIS"
[1] 3
  ITGA6 MUTATED ITGA6 WILD-TYPE 
             16             562 
  ITGA6 MUTATED ITGA6 WILD-TYPE 
             16             562 
[1] "ATP6V1B1 MUTATION ANALYSIS"
[1] 3
  ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE 
                22                556 
  ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE 
                22                556 
[1] "GXYLT1 MUTATION ANALYSIS"
[1] 3
  GXYLT1 MUTATED GXYLT1 WILD-TYPE 
              15              563 
  GXYLT1 MUTATED GXYLT1 WILD-TYPE 
              15              563 
[1] "DOCK5 MUTATION ANALYSIS"
[1] 3
  DOCK5 MUTATED DOCK5 WILD-TYPE 
             32             546 
  DOCK5 MUTATED DOCK5 WILD-TYPE 
             32             546 
[1] "ARHGAP5 MUTATION ANALYSIS"
[1] 3
  ARHGAP5 MUTATED ARHGAP5 WILD-TYPE 
               30               548 
  ARHGAP5 MUTATED ARHGAP5 WILD-TYPE 
               30               548 
[1] "BTBD7 MUTATION ANALYSIS"
[1] 3
  BTBD7 MUTATED BTBD7 WILD-TYPE 
             22             556 
  BTBD7 MUTATED BTBD7 WILD-TYPE 
             22             556 
[1] "GANAB MUTATION ANALYSIS"
[1] 3
  GANAB MUTATED GANAB WILD-TYPE 
             20             558 
  GANAB MUTATED GANAB WILD-TYPE 
             20             558 
[1] "MLL3 MUTATION ANALYSIS"
[1] 3
  MLL3 MUTATED MLL3 WILD-TYPE 
            69            509 
  MLL3 MUTATED MLL3 WILD-TYPE 
            69            509 
[1] "CLDN6 MUTATION ANALYSIS"
[1] 3
  CLDN6 MUTATED CLDN6 WILD-TYPE 
             10             568 
  CLDN6 MUTATED CLDN6 WILD-TYPE 
             10             568 
[1] "SAMD9L MUTATION ANALYSIS"
[1] 3
  SAMD9L MUTATED SAMD9L WILD-TYPE 
              34              544 
  SAMD9L MUTATED SAMD9L WILD-TYPE 
              34              544 
[1] "FAM133A MUTATION ANALYSIS"
[1] 3
  FAM133A MUTATED FAM133A WILD-TYPE 
               12               566 
  FAM133A MUTATED FAM133A WILD-TYPE 
               12               566 
[1] "MTIF2 MUTATION ANALYSIS"
[1] 3
  MTIF2 MUTATED MTIF2 WILD-TYPE 
             25             553 
  MTIF2 MUTATED MTIF2 WILD-TYPE 
             25             553 
[1] "CR1 MUTATION ANALYSIS"
[1] 3
  CR1 MUTATED CR1 WILD-TYPE 
           32           546 
  CR1 MUTATED CR1 WILD-TYPE 
           32           546 
[1] "SERPINI1 MUTATION ANALYSIS"
[1] 3
  SERPINI1 MUTATED SERPINI1 WILD-TYPE 
                 9                569 
  SERPINI1 MUTATED SERPINI1 WILD-TYPE 
                 9                569 
[1] "KIAA0195 MUTATION ANALYSIS"
[1] 3
  KIAA0195 MUTATED KIAA0195 WILD-TYPE 
                22                556 
  KIAA0195 MUTATED KIAA0195 WILD-TYPE 
                22                556 
[1] "PPIG MUTATION ANALYSIS"
[1] 3
  PPIG MUTATED PPIG WILD-TYPE 
            20            558 
  PPIG MUTATED PPIG WILD-TYPE 
            20            558 
[1] "HTR7 MUTATION ANALYSIS"
[1] 3
  HTR7 MUTATED HTR7 WILD-TYPE 
            17            561 
  HTR7 MUTATED HTR7 WILD-TYPE 
            17            561 
[1] "PIGB MUTATION ANALYSIS"
[1] 3
  PIGB MUTATED PIGB WILD-TYPE 
            11            567 
  PIGB MUTATED PIGB WILD-TYPE 
            11            567 
[1] "EEF2K MUTATION ANALYSIS"
[1] 3
  EEF2K MUTATED EEF2K WILD-TYPE 
             14             564 
  EEF2K MUTATED EEF2K WILD-TYPE 
             14             564 
[1] "SNRNP35 MUTATION ANALYSIS"
[1] 3
  SNRNP35 MUTATED SNRNP35 WILD-TYPE 
                7               571 
  SNRNP35 MUTATED SNRNP35 WILD-TYPE 
                7               571 
[1] "ZKSCAN5 MUTATION ANALYSIS"
[1] 3
  ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE 
               13               565 
  ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE 
               13               565 
[1] "CELSR1 MUTATION ANALYSIS"
[1] 3
  CELSR1 MUTATED CELSR1 WILD-TYPE 
              45              533 
  CELSR1 MUTATED CELSR1 WILD-TYPE 
              45              533 
[1] "CBLL1 MUTATION ANALYSIS"
[1] 3
  CBLL1 MUTATED CBLL1 WILD-TYPE 
              8             570 
  CBLL1 MUTATED CBLL1 WILD-TYPE 
              8             570 
[1] "NPHP1 MUTATION ANALYSIS"
[1] 3
  NPHP1 MUTATED NPHP1 WILD-TYPE 
             12             566 
  NPHP1 MUTATED NPHP1 WILD-TYPE 
             12             566 
[1] "CCDC88A MUTATION ANALYSIS"
[1] 3
  CCDC88A MUTATED CCDC88A WILD-TYPE 
               31               547 
  CCDC88A MUTATED CCDC88A WILD-TYPE 
               31               547 
[1] "DTX3 MUTATION ANALYSIS"
[1] 3
  DTX3 MUTATED DTX3 WILD-TYPE 
             7            571 
  DTX3 MUTATED DTX3 WILD-TYPE 
             7            571 
[1] "ZNF43 MUTATION ANALYSIS"
[1] 3
  ZNF43 MUTATED ZNF43 WILD-TYPE 
             31             547 
  ZNF43 MUTATED ZNF43 WILD-TYPE 
             31             547 
[1] "GLT6D1 MUTATION ANALYSIS"
[1] 3
  GLT6D1 MUTATED GLT6D1 WILD-TYPE 
              15              563 
  GLT6D1 MUTATED GLT6D1 WILD-TYPE 
              15              563 
[1] "TAC4 MUTATION ANALYSIS"
[1] 3
  TAC4 MUTATED TAC4 WILD-TYPE 
             4            574 
  TAC4 MUTATED TAC4 WILD-TYPE 
             4            574 
[1] "CCDC108 MUTATION ANALYSIS"
[1] 3
  CCDC108 MUTATED CCDC108 WILD-TYPE 
               29               549 
  CCDC108 MUTATED CCDC108 WILD-TYPE 
               29               549 
[1] "TNRC6C MUTATION ANALYSIS"
[1] 3
  TNRC6C MUTATED TNRC6C WILD-TYPE 
              21              557 
  TNRC6C MUTATED TNRC6C WILD-TYPE 
              21              557 
[1] "TATDN1 MUTATION ANALYSIS"
[1] 3
  TATDN1 MUTATED TATDN1 WILD-TYPE 
               6              572 
  TATDN1 MUTATED TATDN1 WILD-TYPE 
               6              572 
[1] "INO80D MUTATION ANALYSIS"
[1] 3
  INO80D MUTATED INO80D WILD-TYPE 
              23              555 
  INO80D MUTATED INO80D WILD-TYPE 
              23              555 
[1] "WDR7 MUTATION ANALYSIS"
[1] 3
  WDR7 MUTATED WDR7 WILD-TYPE 
            29            549 
  WDR7 MUTATED WDR7 WILD-TYPE 
            29            549 
[1] "FAAH MUTATION ANALYSIS"
[1] 3
  FAAH MUTATED FAAH WILD-TYPE 
             5            573 
  FAAH MUTATED FAAH WILD-TYPE 
             5            573 
[1] "EFNB3 MUTATION ANALYSIS"
[1] 3
  EFNB3 MUTATED EFNB3 WILD-TYPE 
             15             563 
  EFNB3 MUTATED EFNB3 WILD-TYPE 
             15             563 
[1] "MAP3K1 MUTATION ANALYSIS"
[1] 3
  MAP3K1 MUTATED MAP3K1 WILD-TYPE 
              23              555 
  MAP3K1 MUTATED MAP3K1 WILD-TYPE 
              23              555 
[1] "ZNF124 MUTATION ANALYSIS"
[1] 3
  ZNF124 MUTATED ZNF124 WILD-TYPE 
              10              568 
  ZNF124 MUTATED ZNF124 WILD-TYPE 
              10              568 
[1] "SVIL MUTATION ANALYSIS"
[1] 3
  SVIL MUTATED SVIL WILD-TYPE 
            34            544 
  SVIL MUTATED SVIL WILD-TYPE 
            34            544 
[1] "TRMT6 MUTATION ANALYSIS"
[1] 3
  TRMT6 MUTATED TRMT6 WILD-TYPE 
             10             568 
  TRMT6 MUTATED TRMT6 WILD-TYPE 
             10             568 
[1] "ATM MUTATION ANALYSIS"
[1] 3
  ATM MUTATED ATM WILD-TYPE 
           59           519 
  ATM MUTATED ATM WILD-TYPE 
           59           519 
[1] "LEMD1 MUTATION ANALYSIS"
[1] 3
  LEMD1 MUTATED LEMD1 WILD-TYPE 
              4             574 
  LEMD1 MUTATED LEMD1 WILD-TYPE 
              4             574 
[1] "RASA1 MUTATION ANALYSIS"
[1] 3
  RASA1 MUTATED RASA1 WILD-TYPE 
             26             552 
  RASA1 MUTATED RASA1 WILD-TYPE 
             26             552 
[1] "CABP5 MUTATION ANALYSIS"
[1] 3
  CABP5 MUTATED CABP5 WILD-TYPE 
              8             570 
  CABP5 MUTATED CABP5 WILD-TYPE 
              8             570 
[1] "PALB2 MUTATION ANALYSIS"
[1] 3
  PALB2 MUTATED PALB2 WILD-TYPE 
             12             566 
  PALB2 MUTATED PALB2 WILD-TYPE 
             12             566 
[1] "RB1CC1 MUTATION ANALYSIS"
[1] 3
  RB1CC1 MUTATED RB1CC1 WILD-TYPE 
              17              561 
  RB1CC1 MUTATED RB1CC1 WILD-TYPE 
              17              561 
[1] "C16ORF63 MUTATION ANALYSIS"
[1] 3
  C16ORF63 MUTATED C16ORF63 WILD-TYPE 
                10                568 
  C16ORF63 MUTATED C16ORF63 WILD-TYPE 
                10                568 
[1] "ZNF878 MUTATION ANALYSIS"
[1] 3
  ZNF878 MUTATED ZNF878 WILD-TYPE 
              16              562 
  ZNF878 MUTATED ZNF878 WILD-TYPE 
              16              562 
[1] "PIK3CA MUTATION ANALYSIS"
[1] 3
  PIK3CA MUTATED PIK3CA WILD-TYPE 
              84              494 
  PIK3CA MUTATED PIK3CA WILD-TYPE 
              84              494 
[1] "SH3KBP1 MUTATION ANALYSIS"
[1] 3
  SH3KBP1 MUTATED SH3KBP1 WILD-TYPE 
               19               559 
  SH3KBP1 MUTATED SH3KBP1 WILD-TYPE 
               19               559 
[1] "C2ORF76 MUTATION ANALYSIS"
[1] 3
  C2ORF76 MUTATED C2ORF76 WILD-TYPE 
                5               573 
  C2ORF76 MUTATED C2ORF76 WILD-TYPE 
                5               573 
[1] "CCDC150 MUTATION ANALYSIS"
[1] 3
  CCDC150 MUTATED CCDC150 WILD-TYPE 
               14               564 
  CCDC150 MUTATED CCDC150 WILD-TYPE 
               14               564 
[1] "ANKRD20A4 MUTATION ANALYSIS"
[1] 3
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
                 10                 568 
  ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE 
                 10                 568 
[1] "RABGAP1 MUTATION ANALYSIS"
[1] 3
  RABGAP1 MUTATED RABGAP1 WILD-TYPE 
               25               553 
  RABGAP1 MUTATED RABGAP1 WILD-TYPE 
               25               553 
[1] "PPARG MUTATION ANALYSIS"
[1] 3
  PPARG MUTATED PPARG WILD-TYPE 
              6             572 
  PPARG MUTATED PPARG WILD-TYPE 
              6             572 
[1] "TOP2A MUTATION ANALYSIS"
[1] 3
  TOP2A MUTATED TOP2A WILD-TYPE 
             20             558 
  TOP2A MUTATED TOP2A WILD-TYPE 
             20             558 
[1] "U2AF2 MUTATION ANALYSIS"
[1] 3
  U2AF2 MUTATED U2AF2 WILD-TYPE 
             15             563 
  U2AF2 MUTATED U2AF2 WILD-TYPE 
             15             563 
[1] "CCDC153 MUTATION ANALYSIS"
[1] 3
  CCDC153 MUTATED CCDC153 WILD-TYPE 
                7               571 
  CCDC153 MUTATED CCDC153 WILD-TYPE 
                7               571 
[1] "C5ORF42 MUTATION ANALYSIS"
[1] 3
  C5ORF42 MUTATED C5ORF42 WILD-TYPE 
               39               539 
  C5ORF42 MUTATED C5ORF42 WILD-TYPE 
               39               539 
[1] "JAK1 MUTATION ANALYSIS"
[1] 3
  JAK1 MUTATED JAK1 WILD-TYPE 
            20            558 
  JAK1 MUTATED JAK1 WILD-TYPE 
            20            558 
[1] "COIL MUTATION ANALYSIS"
[1] 3
  COIL MUTATED COIL WILD-TYPE 
            11            567 
  COIL MUTATED COIL WILD-TYPE 
            11            567 
[1] "TCF20 MUTATION ANALYSIS"
[1] 3
  TCF20 MUTATED TCF20 WILD-TYPE 
             22             556 
  TCF20 MUTATED TCF20 WILD-TYPE 
             22             556 
[1] "TBX4 MUTATION ANALYSIS"
[1] 3
  TBX4 MUTATED TBX4 WILD-TYPE 
            15            563 
  TBX4 MUTATED TBX4 WILD-TYPE 
            15            563 
[1] "PRKAB1 MUTATION ANALYSIS"
[1] 3
  PRKAB1 MUTATED PRKAB1 WILD-TYPE 
              12              566 
  PRKAB1 MUTATED PRKAB1 WILD-TYPE 
              12              566 
[1] "CETN3 MUTATION ANALYSIS"
[1] 3
  CETN3 MUTATED CETN3 WILD-TYPE 
             11             567 
  CETN3 MUTATED CETN3 WILD-TYPE 
             11             567 
[1] "DDX26B MUTATION ANALYSIS"
[1] 3
  DDX26B MUTATED DDX26B WILD-TYPE 
              13              565 
  DDX26B MUTATED DDX26B WILD-TYPE 
              13              565 
[1] "DLAT MUTATION ANALYSIS"
[1] 3
  DLAT MUTATED DLAT WILD-TYPE 
             9            569 
  DLAT MUTATED DLAT WILD-TYPE 
             9            569 
[1] "MPRIP MUTATION ANALYSIS"
[1] 3
  MPRIP MUTATED MPRIP WILD-TYPE 
             18             560 
  MPRIP MUTATED MPRIP WILD-TYPE 
             18             560 
[1] "NCAPD3 MUTATION ANALYSIS"
[1] 3
  NCAPD3 MUTATED NCAPD3 WILD-TYPE 
              30              548 
  NCAPD3 MUTATED NCAPD3 WILD-TYPE 
              30              548 
[1] "CASP8 MUTATION ANALYSIS"
[1] 3
  CASP8 MUTATED CASP8 WILD-TYPE 
             23             555 
  CASP8 MUTATED CASP8 WILD-TYPE 
             23             555 
[1] "BRD8 MUTATION ANALYSIS"
[1] 3
  BRD8 MUTATED BRD8 WILD-TYPE 
            35            543 
  BRD8 MUTATED BRD8 WILD-TYPE 
            35            543 
[1] "PET112L MUTATION ANALYSIS"
[1] 3
  PET112L MUTATED PET112L WILD-TYPE 
               11               567 
  PET112L MUTATED PET112L WILD-TYPE 
               11               567 
[1] "RGS9BP MUTATION ANALYSIS"
[1] 3
  RGS9BP MUTATED RGS9BP WILD-TYPE 
               9              569 
  RGS9BP MUTATED RGS9BP WILD-TYPE 
               9              569 
[1] "OR5M3 MUTATION ANALYSIS"
[1] 3
  OR5M3 MUTATED OR5M3 WILD-TYPE 
             25             553 
  OR5M3 MUTATED OR5M3 WILD-TYPE 
             25             553 
[1] "FERMT2 MUTATION ANALYSIS"
[1] 3
  FERMT2 MUTATED FERMT2 WILD-TYPE 
              14              564 
  FERMT2 MUTATED FERMT2 WILD-TYPE 
              14              564 
[1] "STX2 MUTATION ANALYSIS"
[1] 3
  STX2 MUTATED STX2 WILD-TYPE 
             7            571 
  STX2 MUTATED STX2 WILD-TYPE 
             7            571 
[1] "ABCA6 MUTATION ANALYSIS"
[1] 3
  ABCA6 MUTATED ABCA6 WILD-TYPE 
             23             555 
  ABCA6 MUTATED ABCA6 WILD-TYPE 
             23             555 
[1] "PIAS1 MUTATION ANALYSIS"
[1] 3
  PIAS1 MUTATED PIAS1 WILD-TYPE 
             14             564 
  PIAS1 MUTATED PIAS1 WILD-TYPE 
             14             564 
[1] "USP26 MUTATION ANALYSIS"
[1] 3
  USP26 MUTATED USP26 WILD-TYPE 
             25             553 
  USP26 MUTATED USP26 WILD-TYPE 
             25             553 
[1] "MLH1 MUTATION ANALYSIS"
[1] 3
  MLH1 MUTATED MLH1 WILD-TYPE 
            10            568 
  MLH1 MUTATED MLH1 WILD-TYPE 
            10            568 
[1] "SLC22A6 MUTATION ANALYSIS"
[1] 3
  SLC22A6 MUTATED SLC22A6 WILD-TYPE 
               16               562 
  SLC22A6 MUTATED SLC22A6 WILD-TYPE 
               16               562 
[1] "EPHA2 MUTATION ANALYSIS"
[1] 3
  EPHA2 MUTATED EPHA2 WILD-TYPE 
             33             545 
  EPHA2 MUTATED EPHA2 WILD-TYPE 
             33             545 
[1] "DAO MUTATION ANALYSIS"
[1] 3
  DAO MUTATED DAO WILD-TYPE 
           15           563 
  DAO MUTATED DAO WILD-TYPE 
           15           563 
[1] "CD79A MUTATION ANALYSIS"
[1] 3
  CD79A MUTATED CD79A WILD-TYPE 
              9             569 
  CD79A MUTATED CD79A WILD-TYPE 
              9             569 
[1] "RAD51AP2 MUTATION ANALYSIS"
[1] 3
  RAD51AP2 MUTATED RAD51AP2 WILD-TYPE 
                20                558 
  RAD51AP2 MUTATED RAD51AP2 WILD-TYPE 
                20                558 
[1] "IPO5 MUTATION ANALYSIS"
[1] 3
  IPO5 MUTATED IPO5 WILD-TYPE 
            25            553 
  IPO5 MUTATED IPO5 WILD-TYPE 
            25            553 
[1] "MYEOV MUTATION ANALYSIS"
[1] 3
  MYEOV MUTATED MYEOV WILD-TYPE 
             13             565 
  MYEOV MUTATED MYEOV WILD-TYPE 
             13             565 
[1] "BCKDHA MUTATION ANALYSIS"
[1] 3
  BCKDHA MUTATED BCKDHA WILD-TYPE 
              11              567 
  BCKDHA MUTATED BCKDHA WILD-TYPE 
              11              567 
[1] "TRAM1L1 MUTATION ANALYSIS"
[1] 3
  TRAM1L1 MUTATED TRAM1L1 WILD-TYPE 
               21               557 
  TRAM1L1 MUTATED TRAM1L1 WILD-TYPE 
               21               557 
[1] "KIAA1704 MUTATION ANALYSIS"
[1] 3
  KIAA1704 MUTATED KIAA1704 WILD-TYPE 
                 6                572 
  KIAA1704 MUTATED KIAA1704 WILD-TYPE 
                 6                572 
[1] "GPC2 MUTATION ANALYSIS"
[1] 3
  GPC2 MUTATED GPC2 WILD-TYPE 
             9            569 
  GPC2 MUTATED GPC2 WILD-TYPE 
             9            569 
[1] "FILIP1L MUTATION ANALYSIS"
[1] 3
  FILIP1L MUTATED FILIP1L WILD-TYPE 
               23               555 
  FILIP1L MUTATED FILIP1L WILD-TYPE 
               23               555 
[1] "GPSM3 MUTATION ANALYSIS"
[1] 3
  GPSM3 MUTATED GPSM3 WILD-TYPE 
             12             566 
  GPSM3 MUTATED GPSM3 WILD-TYPE 
             12             566 
[1] "FAM82A1 MUTATION ANALYSIS"
[1] 3
  FAM82A1 MUTATED FAM82A1 WILD-TYPE 
                7               571 
  FAM82A1 MUTATED FAM82A1 WILD-TYPE 
                7               571 
[1] "KNTC1 MUTATION ANALYSIS"
[1] 3
  KNTC1 MUTATED KNTC1 WILD-TYPE 
             26             552 
  KNTC1 MUTATED KNTC1 WILD-TYPE 
             26             552 
[1] "ERBB4 MUTATION ANALYSIS"
[1] 3
  ERBB4 MUTATED ERBB4 WILD-TYPE 
             66             512 
  ERBB4 MUTATED ERBB4 WILD-TYPE 
             66             512 
[1] "NCAPH MUTATION ANALYSIS"
[1] 3
  NCAPH MUTATED NCAPH WILD-TYPE 
             13             565 
  NCAPH MUTATED NCAPH WILD-TYPE 
             13             565 
[1] "ERBB2 MUTATION ANALYSIS"
[1] 3
  ERBB2 MUTATED ERBB2 WILD-TYPE 
             30             548 
  ERBB2 MUTATED ERBB2 WILD-TYPE 
             30             548 
[1] "ART1 MUTATION ANALYSIS"
[1] 3
  ART1 MUTATED ART1 WILD-TYPE 
             9            569 
  ART1 MUTATED ART1 WILD-TYPE 
             9            569 
[1] "RALGAPB MUTATION ANALYSIS"
[1] 3
  RALGAPB MUTATED RALGAPB WILD-TYPE 
               22               556 
  RALGAPB MUTATED RALGAPB WILD-TYPE 
               22               556 
[1] "CDC14A MUTATION ANALYSIS"
[1] 3
  CDC14A MUTATED CDC14A WILD-TYPE 
              17              561 
  CDC14A MUTATED CDC14A WILD-TYPE 
              17              561 
[1] "RIF1 MUTATION ANALYSIS"
[1] 3
  RIF1 MUTATED RIF1 WILD-TYPE 
            26            552 
  RIF1 MUTATED RIF1 WILD-TYPE 
            26            552 
[1] "STK38 MUTATION ANALYSIS"
[1] 3
  STK38 MUTATED STK38 WILD-TYPE 
              8             570 
  STK38 MUTATED STK38 WILD-TYPE 
              8             570 
[1] "PAPD4 MUTATION ANALYSIS"
[1] 3
  PAPD4 MUTATED PAPD4 WILD-TYPE 
             13             565 
  PAPD4 MUTATED PAPD4 WILD-TYPE 
             13             565 
[1] "ABCB4 MUTATION ANALYSIS"
[1] 3
  ABCB4 MUTATED ABCB4 WILD-TYPE 
             30             548 
  ABCB4 MUTATED ABCB4 WILD-TYPE 
             30             548 
[1] "DIDO1 MUTATION ANALYSIS"
[1] 3
  DIDO1 MUTATED DIDO1 WILD-TYPE 
             50             528 
  DIDO1 MUTATED DIDO1 WILD-TYPE 
             50             528 
[1] "ADNP MUTATION ANALYSIS"
[1] 3
  ADNP MUTATED ADNP WILD-TYPE 
            20            558 
  ADNP MUTATED ADNP WILD-TYPE 
            20            558 
[1] "AQP8 MUTATION ANALYSIS"
[1] 3
  AQP8 MUTATED AQP8 WILD-TYPE 
            14            564 
  AQP8 MUTATED AQP8 WILD-TYPE 
            14            564 
[1] "ZC3H13 MUTATION ANALYSIS"
[1] 3
  ZC3H13 MUTATED ZC3H13 WILD-TYPE 
              41              537 
  ZC3H13 MUTATED ZC3H13 WILD-TYPE 
              41              537 
[1] "C10ORF76 MUTATION ANALYSIS"
[1] 3
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                13                565 
  C10ORF76 MUTATED C10ORF76 WILD-TYPE 
                13                565 
[1] "SYCP1 MUTATION ANALYSIS"
[1] 3
  SYCP1 MUTATED SYCP1 WILD-TYPE 
             28             550 
  SYCP1 MUTATED SYCP1 WILD-TYPE 
             28             550 
[1] "SNRK MUTATION ANALYSIS"
[1] 3
  SNRK MUTATED SNRK WILD-TYPE 
            17            561 
  SNRK MUTATED SNRK WILD-TYPE 
            17            561 
[1] "EAF2 MUTATION ANALYSIS"
[1] 3
  EAF2 MUTATED EAF2 WILD-TYPE 
            11            567 
  EAF2 MUTATED EAF2 WILD-TYPE 
            11            567 
[1] "HSPG2 MUTATION ANALYSIS"
[1] 3
  HSPG2 MUTATED HSPG2 WILD-TYPE 
             75             503 
  HSPG2 MUTATED HSPG2 WILD-TYPE 
             75             503 
[1] "TP53BP1 MUTATION ANALYSIS"
[1] 3
  TP53BP1 MUTATED TP53BP1 WILD-TYPE 
               27               551 
  TP53BP1 MUTATED TP53BP1 WILD-TYPE 
               27               551 
[1] "KLC2 MUTATION ANALYSIS"
[1] 3
  KLC2 MUTATED KLC2 WILD-TYPE 
            16            562 
  KLC2 MUTATED KLC2 WILD-TYPE 
            16            562 
[1] "SRCIN1 MUTATION ANALYSIS"
[1] 3
  SRCIN1 MUTATED SRCIN1 WILD-TYPE 
              18              560 
  SRCIN1 MUTATED SRCIN1 WILD-TYPE 
              18              560 
[1] "FAM98C MUTATION ANALYSIS"
[1] 3
  FAM98C MUTATED FAM98C WILD-TYPE 
              10              568 
  FAM98C MUTATED FAM98C WILD-TYPE 
              10              568 
[1] "PDCD1 MUTATION ANALYSIS"
[1] 3
  PDCD1 MUTATED PDCD1 WILD-TYPE 
              6             572 
  PDCD1 MUTATED PDCD1 WILD-TYPE 
              6             572 
[1] "TMC4 MUTATION ANALYSIS"
[1] 3
  TMC4 MUTATED TMC4 WILD-TYPE 
            20            558 
  TMC4 MUTATED TMC4 WILD-TYPE 
            20            558 
[1] "ACP1 MUTATION ANALYSIS"
[1] 3
  ACP1 MUTATED ACP1 WILD-TYPE 
             9            569 
  ACP1 MUTATED ACP1 WILD-TYPE 
             9            569 
[1] "PLOD3 MUTATION ANALYSIS"
[1] 3
  PLOD3 MUTATED PLOD3 WILD-TYPE 
             20             558 
  PLOD3 MUTATED PLOD3 WILD-TYPE 
             20             558 
[1] "TMEM41B MUTATION ANALYSIS"
[1] 3
  TMEM41B MUTATED TMEM41B WILD-TYPE 
                6               572 
  TMEM41B MUTATED TMEM41B WILD-TYPE 
                6               572 
[1] "ATP2B4 MUTATION ANALYSIS"
[1] 3
  ATP2B4 MUTATED ATP2B4 WILD-TYPE 
              22              556 
  ATP2B4 MUTATED ATP2B4 WILD-TYPE 
              22              556 
[1] "LRRN2 MUTATION ANALYSIS"
[1] 3
  LRRN2 MUTATED LRRN2 WILD-TYPE 
             35             543 
  LRRN2 MUTATED LRRN2 WILD-TYPE 
             35             543 
[1] "OBSCN MUTATION ANALYSIS"
[1] 3
  OBSCN MUTATED OBSCN WILD-TYPE 
            114             464 
  OBSCN MUTATED OBSCN WILD-TYPE 
            114             464 
[1] "KIDINS220 MUTATION ANALYSIS"
[1] 3
  KIDINS220 MUTATED KIDINS220 WILD-TYPE 
                 28                 550 
  KIDINS220 MUTATED KIDINS220 WILD-TYPE 
                 28                 550 
[1] "NID2 MUTATION ANALYSIS"
[1] 3
  NID2 MUTATED NID2 WILD-TYPE 
            22            556 
  NID2 MUTATED NID2 WILD-TYPE 
            22            556 
[1] "KIRREL MUTATION ANALYSIS"
[1] 3
  KIRREL MUTATED KIRREL WILD-TYPE 
              24              554 
  KIRREL MUTATED KIRREL WILD-TYPE 
              24              554 
[1] "PTCH1 MUTATION ANALYSIS"
[1] 3
  PTCH1 MUTATED PTCH1 WILD-TYPE 
             35             543 
  PTCH1 MUTATED PTCH1 WILD-TYPE 
             35             543 
[1] "NUP35 MUTATION ANALYSIS"
[1] 3
  NUP35 MUTATED NUP35 WILD-TYPE 
              7             571 
  NUP35 MUTATED NUP35 WILD-TYPE 
              7             571 
[1] "ZC3H18 MUTATION ANALYSIS"
[1] 3
  ZC3H18 MUTATED ZC3H18 WILD-TYPE 
              25              553 
  ZC3H18 MUTATED ZC3H18 WILD-TYPE 
              25              553 
[1] "GLYR1 MUTATION ANALYSIS"
[1] 3
  GLYR1 MUTATED GLYR1 WILD-TYPE 
             17             561 
  GLYR1 MUTATED GLYR1 WILD-TYPE 
             17             561 
[1] "FRYL MUTATION ANALYSIS"
[1] 3
  FRYL MUTATED FRYL WILD-TYPE 
            35            543 
  FRYL MUTATED FRYL WILD-TYPE 
            35            543 
[1] "CNBD1 MUTATION ANALYSIS"
[1] 3
  CNBD1 MUTATED CNBD1 WILD-TYPE 
             22             556 
  CNBD1 MUTATED CNBD1 WILD-TYPE 
             22             556 
[1] "PANK1 MUTATION ANALYSIS"
[1] 3
  PANK1 MUTATED PANK1 WILD-TYPE 
             13             565 
  PANK1 MUTATED PANK1 WILD-TYPE 
             13             565 
[1] "UGP2 MUTATION ANALYSIS"
[1] 3
  UGP2 MUTATED UGP2 WILD-TYPE 
             9            569 
  UGP2 MUTATED UGP2 WILD-TYPE 
             9            569 
[1] "CASD1 MUTATION ANALYSIS"
[1] 3
  CASD1 MUTATED CASD1 WILD-TYPE 
             15             563 
  CASD1 MUTATED CASD1 WILD-TYPE 
             15             563 
[1] "NT5M MUTATION ANALYSIS"
[1] 3
  NT5M MUTATED NT5M WILD-TYPE 
             7            571 
  NT5M MUTATED NT5M WILD-TYPE 
             7            571 
[1] "AZGP1 MUTATION ANALYSIS"
[1] 3
  AZGP1 MUTATED AZGP1 WILD-TYPE 
              4             574 
  AZGP1 MUTATED AZGP1 WILD-TYPE 
              4             574 
[1] "RAB42 MUTATION ANALYSIS"
[1] 3
  RAB42 MUTATED RAB42 WILD-TYPE 
              5             573 
  RAB42 MUTATED RAB42 WILD-TYPE 
              5             573 
[1] "C11ORF80 MUTATION ANALYSIS"
[1] 3
  C11ORF80 MUTATED C11ORF80 WILD-TYPE 
                 9                569 
  C11ORF80 MUTATED C11ORF80 WILD-TYPE 
                 9                569 
[1] "OXNAD1 MUTATION ANALYSIS"
[1] 3
  OXNAD1 MUTATED OXNAD1 WILD-TYPE 
               9              569 
  OXNAD1 MUTATED OXNAD1 WILD-TYPE 
               9              569 
[1] "KLRK1 MUTATION ANALYSIS"
[1] 3
  KLRK1 MUTATED KLRK1 WILD-TYPE 
              8             570 
  KLRK1 MUTATED KLRK1 WILD-TYPE 
              8             570 
[1] "IPO11 MUTATION ANALYSIS"
[1] 3
  IPO11 MUTATED IPO11 WILD-TYPE 
             13             565 
  IPO11 MUTATED IPO11 WILD-TYPE 
             13             565 
[1] "GAS6 MUTATION ANALYSIS"
[1] 3
  GAS6 MUTATED GAS6 WILD-TYPE 
            18            560 
  GAS6 MUTATED GAS6 WILD-TYPE 
            18            560 
[1] "DMXL2 MUTATION ANALYSIS"
[1] 3
  DMXL2 MUTATED DMXL2 WILD-TYPE 
             50             528 
  DMXL2 MUTATED DMXL2 WILD-TYPE 
             50             528 
[1] "IRS1 MUTATION ANALYSIS"
[1] 3
  IRS1 MUTATED IRS1 WILD-TYPE 
            26            552 
  IRS1 MUTATED IRS1 WILD-TYPE 
            26            552 
[1] "HIST1H1A MUTATION ANALYSIS"
[1] 3
  HIST1H1A MUTATED HIST1H1A WILD-TYPE 
                11                567 
  HIST1H1A MUTATED HIST1H1A WILD-TYPE 
                11                567 
[1] "CTSO MUTATION ANALYSIS"
[1] 3
  CTSO MUTATED CTSO WILD-TYPE 
             7            571 
  CTSO MUTATED CTSO WILD-TYPE 
             7            571 
[1] "CASC3 MUTATION ANALYSIS"
[1] 3
  CASC3 MUTATED CASC3 WILD-TYPE 
             11             567 
  CASC3 MUTATED CASC3 WILD-TYPE 
             11             567 
[1] "TNFSF10 MUTATION ANALYSIS"
[1] 3
  TNFSF10 MUTATED TNFSF10 WILD-TYPE 
                9               569 
  TNFSF10 MUTATED TNFSF10 WILD-TYPE 
                9               569 
[1] "RIC3 MUTATION ANALYSIS"
[1] 3
  RIC3 MUTATED RIC3 WILD-TYPE 
             9            569 
  RIC3 MUTATED RIC3 WILD-TYPE 
             9            569 
[1] "FAM108A1 MUTATION ANALYSIS"
[1] 3
  FAM108A1 MUTATED FAM108A1 WILD-TYPE 
                 6                572 
  FAM108A1 MUTATED FAM108A1 WILD-TYPE 
                 6                572 
[1] "GAB2 MUTATION ANALYSIS"
[1] 3
  GAB2 MUTATED GAB2 WILD-TYPE 
            13            565 
  GAB2 MUTATED GAB2 WILD-TYPE 
            13            565 
[1] "BAHCC1 MUTATION ANALYSIS"
[1] 3
  BAHCC1 MUTATED BAHCC1 WILD-TYPE 
              17              561 
  BAHCC1 MUTATED BAHCC1 WILD-TYPE 
              17              561 
[1] "ARHGAP18 MUTATION ANALYSIS"
[1] 3
  ARHGAP18 MUTATED ARHGAP18 WILD-TYPE 
                10                568 
  ARHGAP18 MUTATED ARHGAP18 WILD-TYPE 
                10                568 
[1] "FHDC1 MUTATION ANALYSIS"
[1] 3
  FHDC1 MUTATED FHDC1 WILD-TYPE 
             19             559 
  FHDC1 MUTATED FHDC1 WILD-TYPE 
             19             559 
[1] "CCDC148 MUTATION ANALYSIS"
[1] 3
  CCDC148 MUTATED CCDC148 WILD-TYPE 
               10               568 
  CCDC148 MUTATED CCDC148 WILD-TYPE 
               10               568 
[1] "SF3B3 MUTATION ANALYSIS"
[1] 3
  SF3B3 MUTATED SF3B3 WILD-TYPE 
             24             554 
  SF3B3 MUTATED SF3B3 WILD-TYPE 
             24             554 
[1] "PPIP5K2 MUTATION ANALYSIS"
[1] 3
  PPIP5K2 MUTATED PPIP5K2 WILD-TYPE 
               16               562 
  PPIP5K2 MUTATED PPIP5K2 WILD-TYPE 
               16               562 
[1] "PTCHD3 MUTATION ANALYSIS"
[1] 3
  PTCHD3 MUTATED PTCHD3 WILD-TYPE 
              26              552 
  PTCHD3 MUTATED PTCHD3 WILD-TYPE 
              26              552 
[1] "DLGAP3 MUTATION ANALYSIS"
[1] 3
  DLGAP3 MUTATED DLGAP3 WILD-TYPE 
              23              555 
  DLGAP3 MUTATED DLGAP3 WILD-TYPE 
              23              555 
[1] "KIN MUTATION ANALYSIS"
[1] 3
  KIN MUTATED KIN WILD-TYPE 
            8           570 
  KIN MUTATED KIN WILD-TYPE 
            8           570 
[1] "KPNA1 MUTATION ANALYSIS"
[1] 3
  KPNA1 MUTATED KPNA1 WILD-TYPE 
              6             572 
  KPNA1 MUTATED KPNA1 WILD-TYPE 
              6             572 
[1] "KIAA0649 MUTATION ANALYSIS"
[1] 3
  KIAA0649 MUTATED KIAA0649 WILD-TYPE 
                22                556 
  KIAA0649 MUTATED KIAA0649 WILD-TYPE 
                22                556 
[1] "NIN MUTATION ANALYSIS"
[1] 3
  NIN MUTATED NIN WILD-TYPE 
           33           545 
  NIN MUTATED NIN WILD-TYPE 
           33           545 
[1] "CTSC MUTATION ANALYSIS"
[1] 3
  CTSC MUTATED CTSC WILD-TYPE 
            11            567 
  CTSC MUTATED CTSC WILD-TYPE 
            11            567 
[1] "TYRO3 MUTATION ANALYSIS"
[1] 3
  TYRO3 MUTATED TYRO3 WILD-TYPE 
             17             561 
  TYRO3 MUTATED TYRO3 WILD-TYPE 
             17             561 
[1] "C2ORF42 MUTATION ANALYSIS"
[1] 3
  C2ORF42 MUTATED C2ORF42 WILD-TYPE 
               15               563 
  C2ORF42 MUTATED C2ORF42 WILD-TYPE 
               15               563 
[1] "COL12A1 MUTATION ANALYSIS"
[1] 3
  COL12A1 MUTATED COL12A1 WILD-TYPE 
               65               513 
  COL12A1 MUTATED COL12A1 WILD-TYPE 
               65               513 
[1] "FAM60A MUTATION ANALYSIS"
[1] 3
  FAM60A MUTATED FAM60A WILD-TYPE 
               4              574 
  FAM60A MUTATED FAM60A WILD-TYPE 
               4              574 
[1] "CBWD6 MUTATION ANALYSIS"
[1] 3
  CBWD6 MUTATED CBWD6 WILD-TYPE 
              7             571 
  CBWD6 MUTATED CBWD6 WILD-TYPE 
              7             571 
[1] "SPG20 MUTATION ANALYSIS"
[1] 3
  SPG20 MUTATED SPG20 WILD-TYPE 
             25             553 
  SPG20 MUTATED SPG20 WILD-TYPE 
             25             553 
[1] "BPTF MUTATION ANALYSIS"
[1] 3
  BPTF MUTATED BPTF WILD-TYPE 
            39            539 
  BPTF MUTATED BPTF WILD-TYPE 
            39            539 
[1] "MAP2K1 MUTATION ANALYSIS"
[1] 3
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
               9              569 
  MAP2K1 MUTATED MAP2K1 WILD-TYPE 
               9              569 
[1] "RAI1 MUTATION ANALYSIS"
[1] 3
  RAI1 MUTATED RAI1 WILD-TYPE 
            32            546 
  RAI1 MUTATED RAI1 WILD-TYPE 
            32            546 
[1] "TRUB1 MUTATION ANALYSIS"
[1] 3
  TRUB1 MUTATED TRUB1 WILD-TYPE 
             12             566 
  TRUB1 MUTATED TRUB1 WILD-TYPE 
             12             566 
[1] "SPATA20 MUTATION ANALYSIS"
[1] 3
  SPATA20 MUTATED SPATA20 WILD-TYPE 
               18               560 
  SPATA20 MUTATED SPATA20 WILD-TYPE 
               18               560 
[1] "NOS3 MUTATION ANALYSIS"
[1] 3
  NOS3 MUTATED NOS3 WILD-TYPE 
            20            558 
  NOS3 MUTATED NOS3 WILD-TYPE 
            20            558 
[1] "FAM155B MUTATION ANALYSIS"
[1] 3
  FAM155B MUTATED FAM155B WILD-TYPE 
               14               564 
  FAM155B MUTATED FAM155B WILD-TYPE 
               14               564 
[1] "MDM2 MUTATION ANALYSIS"
[1] 3
  MDM2 MUTATED MDM2 WILD-TYPE 
             9            569 
  MDM2 MUTATED MDM2 WILD-TYPE 
             9            569 
[1] "ASB11 MUTATION ANALYSIS"
[1] 3
  ASB11 MUTATED ASB11 WILD-TYPE 
             11             567 
  ASB11 MUTATED ASB11 WILD-TYPE 
             11             567 
[1] "TAS2R10 MUTATION ANALYSIS"
[1] 3
  TAS2R10 MUTATED TAS2R10 WILD-TYPE 
                5               573 
  TAS2R10 MUTATED TAS2R10 WILD-TYPE 
                5               573 
[1] "B4GALT6 MUTATION ANALYSIS"
[1] 3
  B4GALT6 MUTATED B4GALT6 WILD-TYPE 
                9               569 
  B4GALT6 MUTATED B4GALT6 WILD-TYPE 
                9               569 
[1] "SNAPC2 MUTATION ANALYSIS"
[1] 3
  SNAPC2 MUTATED SNAPC2 WILD-TYPE 
               9              569 
  SNAPC2 MUTATED SNAPC2 WILD-TYPE 
               9              569 
[1] "TCHP MUTATION ANALYSIS"
[1] 3
  TCHP MUTATED TCHP WILD-TYPE 
            13            565 
  TCHP MUTATED TCHP WILD-TYPE 
            13            565 
[1] "ADNP2 MUTATION ANALYSIS"
[1] 3
  ADNP2 MUTATED ADNP2 WILD-TYPE 
             21             557 
  ADNP2 MUTATED ADNP2 WILD-TYPE 
             21             557 
[1] "PUS7L MUTATION ANALYSIS"
[1] 3
  PUS7L MUTATED PUS7L WILD-TYPE 
             10             568 
  PUS7L MUTATED PUS7L WILD-TYPE 
             10             568 
[1] "NCOA7 MUTATION ANALYSIS"
[1] 3
  NCOA7 MUTATED NCOA7 WILD-TYPE 
             18             560 
  NCOA7 MUTATED NCOA7 WILD-TYPE 
             18             560 
[1] "RAD50 MUTATION ANALYSIS"
[1] 3
  RAD50 MUTATED RAD50 WILD-TYPE 
             15             563 
  RAD50 MUTATED RAD50 WILD-TYPE 
             15             563 
[1] "KIAA1009 MUTATION ANALYSIS"
[1] 3
  KIAA1009 MUTATED KIAA1009 WILD-TYPE 
                18                560 
  KIAA1009 MUTATED KIAA1009 WILD-TYPE 
                18                560 
[1] "PFKP MUTATION ANALYSIS"
[1] 3
  PFKP MUTATED PFKP WILD-TYPE 
            20            558 
  PFKP MUTATED PFKP WILD-TYPE 
            20            558 
[1] "NT5DC1 MUTATION ANALYSIS"
[1] 3
  NT5DC1 MUTATED NT5DC1 WILD-TYPE 
               8              570 
  NT5DC1 MUTATED NT5DC1 WILD-TYPE 
               8              570 
[1] "TM7SF4 MUTATION ANALYSIS"
[1] 3
  TM7SF4 MUTATED TM7SF4 WILD-TYPE 
              24              554 
  TM7SF4 MUTATED TM7SF4 WILD-TYPE 
              24              554 
[1] "PKN2 MUTATION ANALYSIS"
[1] 3
  PKN2 MUTATED PKN2 WILD-TYPE 
            18            560 
  PKN2 MUTATED PKN2 WILD-TYPE 
            18            560 
[1] "THEMIS MUTATION ANALYSIS"
[1] 3
  THEMIS MUTATED THEMIS WILD-TYPE 
              14              564 
  THEMIS MUTATED THEMIS WILD-TYPE 
              14              564 
[1] "GCC2 MUTATION ANALYSIS"
[1] 3
  GCC2 MUTATED GCC2 WILD-TYPE 
            20            558 
  GCC2 MUTATED GCC2 WILD-TYPE 
            20            558 
[1] "FAM70B MUTATION ANALYSIS"
[1] 3
  FAM70B MUTATED FAM70B WILD-TYPE 
              14              564 
  FAM70B MUTATED FAM70B WILD-TYPE 
              14              564 
[1] "C16ORF74 MUTATION ANALYSIS"
[1] 3
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 3                575 
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 3                575 
[1] "ACVR1B MUTATION ANALYSIS"
[1] 3
  ACVR1B MUTATED ACVR1B WILD-TYPE 
              15              563 
  ACVR1B MUTATED ACVR1B WILD-TYPE 
              15              563 
[1] "C2CD3 MUTATION ANALYSIS"
[1] 3
  C2CD3 MUTATED C2CD3 WILD-TYPE 
             30             548 
  C2CD3 MUTATED C2CD3 WILD-TYPE 
             30             548 
[1] "MASTL MUTATION ANALYSIS"
[1] 3
  MASTL MUTATED MASTL WILD-TYPE 
             17             561 
  MASTL MUTATED MASTL WILD-TYPE 
             17             561 
[1] "CASP7 MUTATION ANALYSIS"
[1] 3
  CASP7 MUTATED CASP7 WILD-TYPE 
              5             573 
  CASP7 MUTATED CASP7 WILD-TYPE 
              5             573 
[1] "HIAT1 MUTATION ANALYSIS"
[1] 3
  HIAT1 MUTATED HIAT1 WILD-TYPE 
             11             567 
  HIAT1 MUTATED HIAT1 WILD-TYPE 
             11             567 
[1] "FAM116A MUTATION ANALYSIS"
[1] 3
  FAM116A MUTATED FAM116A WILD-TYPE 
               10               568 
  FAM116A MUTATED FAM116A WILD-TYPE 
               10               568 
[1] "ERBB3 MUTATION ANALYSIS"
[1] 3
  ERBB3 MUTATED ERBB3 WILD-TYPE 
             41             537 
  ERBB3 MUTATED ERBB3 WILD-TYPE 
             41             537 
[1] "NDST2 MUTATION ANALYSIS"
[1] 3
  NDST2 MUTATED NDST2 WILD-TYPE 
             16             562 
  NDST2 MUTATED NDST2 WILD-TYPE 
             16             562 
[1] "RB1 MUTATION ANALYSIS"
[1] 3
  RB1 MUTATED RB1 WILD-TYPE 
           21           557 
  RB1 MUTATED RB1 WILD-TYPE 
           21           557 
[1] "GNAS MUTATION ANALYSIS"
[1] 3
  GNAS MUTATED GNAS WILD-TYPE 
            49            529 
  GNAS MUTATED GNAS WILD-TYPE 
            49            529 
[1] "SPG11 MUTATION ANALYSIS"
[1] 3
  SPG11 MUTATED SPG11 WILD-TYPE 
             22             556 
  SPG11 MUTATED SPG11 WILD-TYPE 
             22             556 
[1] "FAH MUTATION ANALYSIS"
[1] 3
  FAH MUTATED FAH WILD-TYPE 
            9           569 
  FAH MUTATED FAH WILD-TYPE 
            9           569 
[1] "CNTLN MUTATION ANALYSIS"
[1] 3
  CNTLN MUTATED CNTLN WILD-TYPE 
             45             533 
  CNTLN MUTATED CNTLN WILD-TYPE 
             45             533 
[1] "KIAA0748 MUTATION ANALYSIS"
[1] 3
  KIAA0748 MUTATED KIAA0748 WILD-TYPE 
                21                557 
  KIAA0748 MUTATED KIAA0748 WILD-TYPE 
                21                557 
[1] "ZMYM3 MUTATION ANALYSIS"
[1] 3
  ZMYM3 MUTATED ZMYM3 WILD-TYPE 
             22             556 
  ZMYM3 MUTATED ZMYM3 WILD-TYPE 
             22             556 
[1] "C4ORF6 MUTATION ANALYSIS"
[1] 3
  C4ORF6 MUTATED C4ORF6 WILD-TYPE 
              12              566 
  C4ORF6 MUTATED C4ORF6 WILD-TYPE 
              12              566 
[1] "DPP7 MUTATION ANALYSIS"
[1] 3
  DPP7 MUTATED DPP7 WILD-TYPE 
            11            567 
  DPP7 MUTATED DPP7 WILD-TYPE 
            11            567 
[1] "DUSP9 MUTATION ANALYSIS"
[1] 3
  DUSP9 MUTATED DUSP9 WILD-TYPE 
             10             568 
  DUSP9 MUTATED DUSP9 WILD-TYPE 
             10             568 
[1] "BCL9L MUTATION ANALYSIS"
[1] 3
  BCL9L MUTATED BCL9L WILD-TYPE 
             31             547 
  BCL9L MUTATED BCL9L WILD-TYPE 
             31             547 
[1] "SENP3 MUTATION ANALYSIS"
[1] 3
  SENP3 MUTATED SENP3 WILD-TYPE 
             14             564 
  SENP3 MUTATED SENP3 WILD-TYPE 
             14             564 
[1] "MMP3 MUTATION ANALYSIS"
[1] 3
  MMP3 MUTATED MMP3 WILD-TYPE 
            13            565 
  MMP3 MUTATED MMP3 WILD-TYPE 
            13            565 
[1] "RCOR3 MUTATION ANALYSIS"
[1] 3
  RCOR3 MUTATED RCOR3 WILD-TYPE 
             17             561 
  RCOR3 MUTATED RCOR3 WILD-TYPE 
             17             561 
[1] "MBD2 MUTATION ANALYSIS"
[1] 3
  MBD2 MUTATED MBD2 WILD-TYPE 
            12            566 
  MBD2 MUTATED MBD2 WILD-TYPE 
            12            566 
[1] "ABCB6 MUTATION ANALYSIS"
[1] 3
  ABCB6 MUTATED ABCB6 WILD-TYPE 
             18             560 
  ABCB6 MUTATED ABCB6 WILD-TYPE 
             18             560 
[1] "BTBD11 MUTATION ANALYSIS"
[1] 3
  BTBD11 MUTATED BTBD11 WILD-TYPE 
              31              547 
  BTBD11 MUTATED BTBD11 WILD-TYPE 
              31              547 
[1] "SOX7 MUTATION ANALYSIS"
[1] 3
  SOX7 MUTATED SOX7 WILD-TYPE 
            20            558 
  SOX7 MUTATED SOX7 WILD-TYPE 
            20            558 
[1] "HCRTR2 MUTATION ANALYSIS"
[1] 3
  HCRTR2 MUTATED HCRTR2 WILD-TYPE 
              14              564 
  HCRTR2 MUTATED HCRTR2 WILD-TYPE 
              14              564 
[1] "LARP1B MUTATION ANALYSIS"
[1] 3
  LARP1B MUTATED LARP1B WILD-TYPE 
              14              564 
  LARP1B MUTATED LARP1B WILD-TYPE 
              14              564 
[1] "C17ORF57 MUTATION ANALYSIS"
[1] 3
  C17ORF57 MUTATED C17ORF57 WILD-TYPE 
                16                562 
  C17ORF57 MUTATED C17ORF57 WILD-TYPE 
                16                562 
[1] "HAUS3 MUTATION ANALYSIS"
[1] 3
  HAUS3 MUTATED HAUS3 WILD-TYPE 
             13             565 
  HAUS3 MUTATED HAUS3 WILD-TYPE 
             13             565 
[1] "EHMT2 MUTATION ANALYSIS"
[1] 3
  EHMT2 MUTATED EHMT2 WILD-TYPE 
             23             555 
  EHMT2 MUTATED EHMT2 WILD-TYPE 
             23             555 
[1] "PLEKHA5 MUTATION ANALYSIS"
[1] 3
  PLEKHA5 MUTATED PLEKHA5 WILD-TYPE 
               23               555 
  PLEKHA5 MUTATED PLEKHA5 WILD-TYPE 
               23               555 
[1] "ALG10 MUTATION ANALYSIS"
[1] 3
  ALG10 MUTATED ALG10 WILD-TYPE 
             17             561 
  ALG10 MUTATED ALG10 WILD-TYPE 
             17             561 
[1] "NAA16 MUTATION ANALYSIS"
[1] 3
  NAA16 MUTATED NAA16 WILD-TYPE 
             15             563 
  NAA16 MUTATED NAA16 WILD-TYPE 
             15             563 
[1] "C6ORF150 MUTATION ANALYSIS"
[1] 3
  C6ORF150 MUTATED C6ORF150 WILD-TYPE 
                 8                570 
  C6ORF150 MUTATED C6ORF150 WILD-TYPE 
                 8                570 
[1] "SLC7A10 MUTATION ANALYSIS"
[1] 3
  SLC7A10 MUTATED SLC7A10 WILD-TYPE 
                6               572 
  SLC7A10 MUTATED SLC7A10 WILD-TYPE 
                6               572 
[1] "KIF21A MUTATION ANALYSIS"
[1] 3
  KIF21A MUTATED KIF21A WILD-TYPE 
              24              554 
  KIF21A MUTATED KIF21A WILD-TYPE 
              24              554 
[1] "GPR82 MUTATION ANALYSIS"
[1] 3
  GPR82 MUTATED GPR82 WILD-TYPE 
              9             569 
  GPR82 MUTATED GPR82 WILD-TYPE 
              9             569 
[1] "C14ORF50 MUTATION ANALYSIS"
[1] 3
  C14ORF50 MUTATED C14ORF50 WILD-TYPE 
                 8                570 
  C14ORF50 MUTATED C14ORF50 WILD-TYPE 
                 8                570 
[1] "ELOVL2 MUTATION ANALYSIS"
[1] 3
  ELOVL2 MUTATED ELOVL2 WILD-TYPE 
               9              569 
  ELOVL2 MUTATED ELOVL2 WILD-TYPE 
               9              569 
[1] "GPC4 MUTATION ANALYSIS"
[1] 3
  GPC4 MUTATED GPC4 WILD-TYPE 
             9            569 
  GPC4 MUTATED GPC4 WILD-TYPE 
             9            569 
[1] "FOXN3 MUTATION ANALYSIS"
[1] 3
  FOXN3 MUTATED FOXN3 WILD-TYPE 
             15             563 
  FOXN3 MUTATED FOXN3 WILD-TYPE 
             15             563 
[1] "SETDB2 MUTATION ANALYSIS"
[1] 3
  SETDB2 MUTATED SETDB2 WILD-TYPE 
              17              561 
  SETDB2 MUTATED SETDB2 WILD-TYPE 
              17              561 
[1] "CTNNA1 MUTATION ANALYSIS"
[1] 3
  CTNNA1 MUTATED CTNNA1 WILD-TYPE 
              22              556 
  CTNNA1 MUTATED CTNNA1 WILD-TYPE 
              22              556 
[1] "UBE2Q1 MUTATION ANALYSIS"
[1] 3
  UBE2Q1 MUTATED UBE2Q1 WILD-TYPE 
               7              571 
  UBE2Q1 MUTATED UBE2Q1 WILD-TYPE 
               7              571 
[1] "MAP2K7 MUTATION ANALYSIS"
[1] 3
  MAP2K7 MUTATED MAP2K7 WILD-TYPE 
              27              551 
  MAP2K7 MUTATED MAP2K7 WILD-TYPE 
              27              551 
[1] "SH3RF1 MUTATION ANALYSIS"
[1] 3
  SH3RF1 MUTATED SH3RF1 WILD-TYPE 
              15              563 
  SH3RF1 MUTATED SH3RF1 WILD-TYPE 
              15              563 
[1] "GPR161 MUTATION ANALYSIS"
[1] 3
  GPR161 MUTATED GPR161 WILD-TYPE 
              18              560 
  GPR161 MUTATED GPR161 WILD-TYPE 
              18              560 
[1] "KANK4 MUTATION ANALYSIS"
[1] 3
  KANK4 MUTATED KANK4 WILD-TYPE 
             19             559 
  KANK4 MUTATED KANK4 WILD-TYPE 
             19             559 
[1] "ZC3H4 MUTATION ANALYSIS"
[1] 3
  ZC3H4 MUTATED ZC3H4 WILD-TYPE 
             22             556 
  ZC3H4 MUTATED ZC3H4 WILD-TYPE 
             22             556 
[1] "KYNU MUTATION ANALYSIS"
[1] 3
  KYNU MUTATED KYNU WILD-TYPE 
            14            564 
  KYNU MUTATED KYNU WILD-TYPE 
            14            564 
[1] "MIA2 MUTATION ANALYSIS"
[1] 3
  MIA2 MUTATED MIA2 WILD-TYPE 
            11            567 
  MIA2 MUTATED MIA2 WILD-TYPE 
            11            567 
[1] "PHF1 MUTATION ANALYSIS"
[1] 3
  PHF1 MUTATED PHF1 WILD-TYPE 
             9            569 
  PHF1 MUTATED PHF1 WILD-TYPE 
             9            569 
[1] "TMEFF2 MUTATION ANALYSIS"
[1] 3
  TMEFF2 MUTATED TMEFF2 WILD-TYPE 
              13              565 
  TMEFF2 MUTATED TMEFF2 WILD-TYPE 
              13              565 
[1] "FAM83E MUTATION ANALYSIS"
[1] 3
  FAM83E MUTATED FAM83E WILD-TYPE 
              15              563 
  FAM83E MUTATED FAM83E WILD-TYPE 
              15              563 
[1] "PPP3CA MUTATION ANALYSIS"
[1] 3
  PPP3CA MUTATED PPP3CA WILD-TYPE 
              13              565 
  PPP3CA MUTATED PPP3CA WILD-TYPE 
              13              565 
[1] "RASAL2 MUTATION ANALYSIS"
[1] 3
  RASAL2 MUTATED RASAL2 WILD-TYPE 
              23              555 
  RASAL2 MUTATED RASAL2 WILD-TYPE 
              23              555 
[1] "RRS1 MUTATION ANALYSIS"
[1] 3
  RRS1 MUTATED RRS1 WILD-TYPE 
            10            568 
  RRS1 MUTATED RRS1 WILD-TYPE 
            10            568 
[1] "RBM6 MUTATION ANALYSIS"
[1] 3
  RBM6 MUTATED RBM6 WILD-TYPE 
            26            552 
  RBM6 MUTATED RBM6 WILD-TYPE 
            26            552 
[1] "AXIN2 MUTATION ANALYSIS"
[1] 3
  AXIN2 MUTATED AXIN2 WILD-TYPE 
             22             556 
  AXIN2 MUTATED AXIN2 WILD-TYPE 
             22             556 
[1] "TFE3 MUTATION ANALYSIS"
[1] 3
  TFE3 MUTATED TFE3 WILD-TYPE 
            10            568 
  TFE3 MUTATED TFE3 WILD-TYPE 
            10            568 
[1] "RPL22 MUTATION ANALYSIS"
[1] 3
  RPL22 MUTATED RPL22 WILD-TYPE 
              9             569 
  RPL22 MUTATED RPL22 WILD-TYPE 
              9             569 
[1] "CDC5L MUTATION ANALYSIS"
[1] 3
  CDC5L MUTATED CDC5L WILD-TYPE 
             17             561 
  CDC5L MUTATED CDC5L WILD-TYPE 
             17             561 
[1] "SYNCRIP MUTATION ANALYSIS"
[1] 3
  SYNCRIP MUTATED SYNCRIP WILD-TYPE 
               17               561 
  SYNCRIP MUTATED SYNCRIP WILD-TYPE 
               17               561 
[1] "CRYGA MUTATION ANALYSIS"
[1] 3
  CRYGA MUTATED CRYGA WILD-TYPE 
             11             567 
  CRYGA MUTATED CRYGA WILD-TYPE 
             11             567 
[1] "SF3B2 MUTATION ANALYSIS"
[1] 3
  SF3B2 MUTATED SF3B2 WILD-TYPE 
             20             558 
  SF3B2 MUTATED SF3B2 WILD-TYPE 
             20             558 
[1] "FAM113B MUTATION ANALYSIS"
[1] 3
  FAM113B MUTATED FAM113B WILD-TYPE 
               17               561 
  FAM113B MUTATED FAM113B WILD-TYPE 
               17               561 
[1] "PTPN4 MUTATION ANALYSIS"
[1] 3
  PTPN4 MUTATED PTPN4 WILD-TYPE 
             17             561 
  PTPN4 MUTATED PTPN4 WILD-TYPE 
             17             561 
[1] "RNF111 MUTATION ANALYSIS"
[1] 3
  RNF111 MUTATED RNF111 WILD-TYPE 
              18              560 
  RNF111 MUTATED RNF111 WILD-TYPE 
              18              560 
[1] "LAT2 MUTATION ANALYSIS"
[1] 3
  LAT2 MUTATED LAT2 WILD-TYPE 
            11            567 
  LAT2 MUTATED LAT2 WILD-TYPE 
            11            567 
[1] "ENTPD2 MUTATION ANALYSIS"
[1] 3
  ENTPD2 MUTATED ENTPD2 WILD-TYPE 
               7              571 
  ENTPD2 MUTATED ENTPD2 WILD-TYPE 
               7              571 
[1] "CUL2 MUTATION ANALYSIS"
[1] 3
  CUL2 MUTATED CUL2 WILD-TYPE 
            10            568 
  CUL2 MUTATED CUL2 WILD-TYPE 
            10            568 
[1] "CROT MUTATION ANALYSIS"
[1] 3
  CROT MUTATED CROT WILD-TYPE 
            17            561 
  CROT MUTATED CROT WILD-TYPE 
            17            561 
[1] "PDS5B MUTATION ANALYSIS"
[1] 3
  PDS5B MUTATED PDS5B WILD-TYPE 
             27             551 
  PDS5B MUTATED PDS5B WILD-TYPE 
             27             551 
[1] "MTMR6 MUTATION ANALYSIS"
[1] 3
  MTMR6 MUTATED MTMR6 WILD-TYPE 
             13             565 
  MTMR6 MUTATED MTMR6 WILD-TYPE 
             13             565 
[1] "SYCP2L MUTATION ANALYSIS"
[1] 3
  SYCP2L MUTATED SYCP2L WILD-TYPE 
              17              561 
  SYCP2L MUTATED SYCP2L WILD-TYPE 
              17              561 
[1] "NUB1 MUTATION ANALYSIS"
[1] 3
  NUB1 MUTATED NUB1 WILD-TYPE 
            12            566 
  NUB1 MUTATED NUB1 WILD-TYPE 
            12            566 
[1] "ZFHX3 MUTATION ANALYSIS"
[1] 3
  ZFHX3 MUTATED ZFHX3 WILD-TYPE 
             46             532 
  ZFHX3 MUTATED ZFHX3 WILD-TYPE 
             46             532 
[1] "EVI5 MUTATION ANALYSIS"
[1] 3
  EVI5 MUTATED EVI5 WILD-TYPE 
            13            565 
  EVI5 MUTATED EVI5 WILD-TYPE 
            13            565 
[1] "TIMP3 MUTATION ANALYSIS"
[1] 3
  TIMP3 MUTATED TIMP3 WILD-TYPE 
             11             567 
  TIMP3 MUTATED TIMP3 WILD-TYPE 
             11             567 
[1] "EIF4EBP2 MUTATION ANALYSIS"
[1] 3
  EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE 
                 7                571 
  EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE 
                 7                571 
[1] "HOXB7 MUTATION ANALYSIS"
[1] 3
  HOXB7 MUTATED HOXB7 WILD-TYPE 
              9             569 
  HOXB7 MUTATED HOXB7 WILD-TYPE 
              9             569 
[1] "CYP4B1 MUTATION ANALYSIS"
[1] 3
  CYP4B1 MUTATED CYP4B1 WILD-TYPE 
              11              567 
  CYP4B1 MUTATED CYP4B1 WILD-TYPE 
              11              567 
[1] "PTOV1 MUTATION ANALYSIS"
[1] 3
  PTOV1 MUTATED PTOV1 WILD-TYPE 
             13             565 
  PTOV1 MUTATED PTOV1 WILD-TYPE 
             13             565 
[1] "NOBOX MUTATION ANALYSIS"
[1] 3
  NOBOX MUTATED NOBOX WILD-TYPE 
             12             566 
  NOBOX MUTATED NOBOX WILD-TYPE 
             12             566 
[1] "SORBS2 MUTATION ANALYSIS"
[1] 3
  SORBS2 MUTATED SORBS2 WILD-TYPE 
              27              551 
  SORBS2 MUTATED SORBS2 WILD-TYPE 
              27              551 
[1] "DNAH5 MUTATION ANALYSIS"
[1] 3
  DNAH5 MUTATED DNAH5 WILD-TYPE 
            106             472 
  DNAH5 MUTATED DNAH5 WILD-TYPE 
            106             472 
[1] "CLMN MUTATION ANALYSIS"
[1] 3
  CLMN MUTATED CLMN WILD-TYPE 
            17            561 
  CLMN MUTATED CLMN WILD-TYPE 
            17            561 
[1] "CBLN3 MUTATION ANALYSIS"
[1] 3
  CBLN3 MUTATED CBLN3 WILD-TYPE 
              7             571 
  CBLN3 MUTATED CBLN3 WILD-TYPE 
              7             571 
[1] "JHDM1D MUTATION ANALYSIS"
[1] 3
  JHDM1D MUTATED JHDM1D WILD-TYPE 
              11              567 
  JHDM1D MUTATED JHDM1D WILD-TYPE 
              11              567 
[1] "FAM123C MUTATION ANALYSIS"
[1] 3
  FAM123C MUTATED FAM123C WILD-TYPE 
               17               561 
  FAM123C MUTATED FAM123C WILD-TYPE 
               17               561 
[1] "GLIPR1L2 MUTATION ANALYSIS"
[1] 3
  GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE 
                15                563 
  GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE 
                15                563 
[1] "TBC1D26 MUTATION ANALYSIS"
[1] 3
  TBC1D26 MUTATED TBC1D26 WILD-TYPE 
                8               570 
  TBC1D26 MUTATED TBC1D26 WILD-TYPE 
                8               570 
[1] "BTNL3 MUTATION ANALYSIS"
[1] 3
  BTNL3 MUTATED BTNL3 WILD-TYPE 
              6             572 
  BTNL3 MUTATED BTNL3 WILD-TYPE 
              6             572 
[1] "MYO9B MUTATION ANALYSIS"
[1] 3
  MYO9B MUTATED MYO9B WILD-TYPE 
             28             550 
  MYO9B MUTATED MYO9B WILD-TYPE 
             28             550 
[1] "KDM3B MUTATION ANALYSIS"
[1] 3
  KDM3B MUTATED KDM3B WILD-TYPE 
             28             550 
  KDM3B MUTATED KDM3B WILD-TYPE 
             28             550 
[1] "USP35 MUTATION ANALYSIS"
[1] 3
  USP35 MUTATED USP35 WILD-TYPE 
             12             566 
  USP35 MUTATED USP35 WILD-TYPE 
             12             566 
[1] "ARAF MUTATION ANALYSIS"
[1] 3
  ARAF MUTATED ARAF WILD-TYPE 
            15            563 
  ARAF MUTATED ARAF WILD-TYPE 
            15            563 
[1] "YLPM1 MUTATION ANALYSIS"
[1] 3
  YLPM1 MUTATED YLPM1 WILD-TYPE 
             31             547 
  YLPM1 MUTATED YLPM1 WILD-TYPE 
             31             547 
[1] "TXLNG MUTATION ANALYSIS"
[1] 3
  TXLNG MUTATED TXLNG WILD-TYPE 
              9             569 
  TXLNG MUTATED TXLNG WILD-TYPE 
              9             569 
[1] "PIK3R3 MUTATION ANALYSIS"
[1] 3
  PIK3R3 MUTATED PIK3R3 WILD-TYPE 
              10              568 
  PIK3R3 MUTATED PIK3R3 WILD-TYPE 
              10              568 
[1] "UBR3 MUTATION ANALYSIS"
[1] 3
  UBR3 MUTATED UBR3 WILD-TYPE 
            14            564 
  UBR3 MUTATED UBR3 WILD-TYPE 
            14            564 
[1] "RELT MUTATION ANALYSIS"
[1] 3
  RELT MUTATED RELT WILD-TYPE 
             8            570 
  RELT MUTATED RELT WILD-TYPE 
             8            570 
[1] "TUBE1 MUTATION ANALYSIS"
[1] 3
  TUBE1 MUTATED TUBE1 WILD-TYPE 
             10             568 
  TUBE1 MUTATED TUBE1 WILD-TYPE 
             10             568 
[1] "TRIP11 MUTATION ANALYSIS"
[1] 3
  TRIP11 MUTATED TRIP11 WILD-TYPE 
              18              560 
  TRIP11 MUTATED TRIP11 WILD-TYPE 
              18              560 
[1] "ADCY10 MUTATION ANALYSIS"
[1] 3
  ADCY10 MUTATED ADCY10 WILD-TYPE 
              27              551 
  ADCY10 MUTATED ADCY10 WILD-TYPE 
              27              551 
[1] "INTS12 MUTATION ANALYSIS"
[1] 3
  INTS12 MUTATED INTS12 WILD-TYPE 
               6              572 
  INTS12 MUTATED INTS12 WILD-TYPE 
               6              572 
[1] "TNFRSF9 MUTATION ANALYSIS"
[1] 3
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
               11               567 
  TNFRSF9 MUTATED TNFRSF9 WILD-TYPE 
               11               567 
[1] "DYX1C1 MUTATION ANALYSIS"
[1] 3
  DYX1C1 MUTATED DYX1C1 WILD-TYPE 
              13              565 
  DYX1C1 MUTATED DYX1C1 WILD-TYPE 
              13              565 
[1] "KIAA1522 MUTATION ANALYSIS"
[1] 3
  KIAA1522 MUTATED KIAA1522 WILD-TYPE 
                13                565 
  KIAA1522 MUTATED KIAA1522 WILD-TYPE 
                13                565 
[1] "WDR5 MUTATION ANALYSIS"
[1] 3
  WDR5 MUTATED WDR5 WILD-TYPE 
             6            572 
  WDR5 MUTATED WDR5 WILD-TYPE 
             6            572 
[1] "GCDH MUTATION ANALYSIS"
[1] 3
  GCDH MUTATED GCDH WILD-TYPE 
             8            570 
  GCDH MUTATED GCDH WILD-TYPE 
             8            570 
[1] "CREBBP MUTATION ANALYSIS"
[1] 3
  CREBBP MUTATED CREBBP WILD-TYPE 
              48              530 
  CREBBP MUTATED CREBBP WILD-TYPE 
              48              530 
[1] "IDH2 MUTATION ANALYSIS"
[1] 3
  IDH2 MUTATED IDH2 WILD-TYPE 
             8            570 
  IDH2 MUTATED IDH2 WILD-TYPE 
             8            570 
[1] "POP1 MUTATION ANALYSIS"
[1] 3
  POP1 MUTATED POP1 WILD-TYPE 
            22            556 
  POP1 MUTATED POP1 WILD-TYPE 
            22            556 
[1] "NTAN1 MUTATION ANALYSIS"
[1] 3
  NTAN1 MUTATED NTAN1 WILD-TYPE 
              7             571 
  NTAN1 MUTATED NTAN1 WILD-TYPE 
              7             571 
[1] "ZNF776 MUTATION ANALYSIS"
[1] 3
  ZNF776 MUTATED ZNF776 WILD-TYPE 
              10              568 
  ZNF776 MUTATED ZNF776 WILD-TYPE 
              10              568 
[1] "USP15 MUTATION ANALYSIS"
[1] 3
  USP15 MUTATED USP15 WILD-TYPE 
              9             569 
  USP15 MUTATED USP15 WILD-TYPE 
              9             569 
[1] "IGFBP1 MUTATION ANALYSIS"
[1] 3
  IGFBP1 MUTATED IGFBP1 WILD-TYPE 
              11              567 
  IGFBP1 MUTATED IGFBP1 WILD-TYPE 
              11              567 
[1] "GON4L MUTATION ANALYSIS"
[1] 3
  GON4L MUTATED GON4L WILD-TYPE 
             20             558 
  GON4L MUTATED GON4L WILD-TYPE 
             20             558 
[1] "C19ORF26 MUTATION ANALYSIS"
[1] 3
  C19ORF26 MUTATED C19ORF26 WILD-TYPE 
                10                568 
  C19ORF26 MUTATED C19ORF26 WILD-TYPE 
                10                568 
[1] "PPP1R13B MUTATION ANALYSIS"
[1] 3
  PPP1R13B MUTATED PPP1R13B WILD-TYPE 
                18                560 
  PPP1R13B MUTATED PPP1R13B WILD-TYPE 
                18                560 
[1] "CDC25C MUTATION ANALYSIS"
[1] 3
  CDC25C MUTATED CDC25C WILD-TYPE 
              11              567 
  CDC25C MUTATED CDC25C WILD-TYPE 
              11              567 
[1] "IFRD1 MUTATION ANALYSIS"
[1] 3
  IFRD1 MUTATED IFRD1 WILD-TYPE 
             10             568 
  IFRD1 MUTATED IFRD1 WILD-TYPE 
             10             568 
[1] "TM6SF1 MUTATION ANALYSIS"
[1] 3
  TM6SF1 MUTATED TM6SF1 WILD-TYPE 
               9              569 
  TM6SF1 MUTATED TM6SF1 WILD-TYPE 
               9              569 
[1] "CUBN MUTATION ANALYSIS"
[1] 3
  CUBN MUTATED CUBN WILD-TYPE 
            72            506 
  CUBN MUTATED CUBN WILD-TYPE 
            72            506 
[1] "EIF5A2 MUTATION ANALYSIS"
[1] 3
  EIF5A2 MUTATED EIF5A2 WILD-TYPE 
               6              572 
  EIF5A2 MUTATED EIF5A2 WILD-TYPE 
               6              572 
[1] "HSPA14 MUTATION ANALYSIS"
[1] 3
  HSPA14 MUTATED HSPA14 WILD-TYPE 
               7              571 
  HSPA14 MUTATED HSPA14 WILD-TYPE 
               7              571 
[1] "CHPF2 MUTATION ANALYSIS"
[1] 3
  CHPF2 MUTATED CHPF2 WILD-TYPE 
             21             557 
  CHPF2 MUTATED CHPF2 WILD-TYPE 
             21             557 
[1] "FCN2 MUTATION ANALYSIS"
[1] 3
  FCN2 MUTATED FCN2 WILD-TYPE 
            14            564 
  FCN2 MUTATED FCN2 WILD-TYPE 
            14            564 
[1] "FGF7 MUTATION ANALYSIS"
[1] 3
  FGF7 MUTATED FGF7 WILD-TYPE 
             7            571 
  FGF7 MUTATED FGF7 WILD-TYPE 
             7            571 
[1] "KIAA0240 MUTATION ANALYSIS"
[1] 3
  KIAA0240 MUTATED KIAA0240 WILD-TYPE 
                15                563 
  KIAA0240 MUTATED KIAA0240 WILD-TYPE 
                15                563 
[1] "LRP12 MUTATION ANALYSIS"
[1] 3
  LRP12 MUTATED LRP12 WILD-TYPE 
             39             539 
  LRP12 MUTATED LRP12 WILD-TYPE 
             39             539 
[1] "EFHA1 MUTATION ANALYSIS"
[1] 3
  EFHA1 MUTATED EFHA1 WILD-TYPE 
             16             562 
  EFHA1 MUTATED EFHA1 WILD-TYPE 
             16             562 
[1] "GTF3C1 MUTATION ANALYSIS"
[1] 3
  GTF3C1 MUTATED GTF3C1 WILD-TYPE 
              39              539 
  GTF3C1 MUTATED GTF3C1 WILD-TYPE 
              39              539 
[1] "KIAA0100 MUTATION ANALYSIS"
[1] 3
  KIAA0100 MUTATED KIAA0100 WILD-TYPE 
                29                549 
  KIAA0100 MUTATED KIAA0100 WILD-TYPE 
                29                549 
[1] "RPS20 MUTATION ANALYSIS"
[1] 3
  RPS20 MUTATED RPS20 WILD-TYPE 
              4             574 
  RPS20 MUTATED RPS20 WILD-TYPE 
              4             574 
[1] "FASTKD1 MUTATION ANALYSIS"
[1] 3
  FASTKD1 MUTATED FASTKD1 WILD-TYPE 
               14               564 
  FASTKD1 MUTATED FASTKD1 WILD-TYPE 
               14               564 
[1] "EOMES MUTATION ANALYSIS"
[1] 3
  EOMES MUTATED EOMES WILD-TYPE 
             11             567 
  EOMES MUTATED EOMES WILD-TYPE 
             11             567 
[1] "ULK2 MUTATION ANALYSIS"
[1] 3
  ULK2 MUTATED ULK2 WILD-TYPE 
            13            565 
  ULK2 MUTATED ULK2 WILD-TYPE 
            13            565 
[1] "INSIG2 MUTATION ANALYSIS"
[1] 3
  INSIG2 MUTATED INSIG2 WILD-TYPE 
               8              570 
  INSIG2 MUTATED INSIG2 WILD-TYPE 
               8              570 
[1] "DPAGT1 MUTATION ANALYSIS"
[1] 3
  DPAGT1 MUTATED DPAGT1 WILD-TYPE 
               6              572 
  DPAGT1 MUTATED DPAGT1 WILD-TYPE 
               6              572 
[1] "C6ORF165 MUTATION ANALYSIS"
[1] 3
  C6ORF165 MUTATED C6ORF165 WILD-TYPE 
                18                560 
  C6ORF165 MUTATED C6ORF165 WILD-TYPE 
                18                560 
[1] "YBX2 MUTATION ANALYSIS"
[1] 3
  YBX2 MUTATED YBX2 WILD-TYPE 
             8            570 
  YBX2 MUTATED YBX2 WILD-TYPE 
             8            570 
[1] "CCDC138 MUTATION ANALYSIS"
[1] 3
  CCDC138 MUTATED CCDC138 WILD-TYPE 
               11               567 
  CCDC138 MUTATED CCDC138 WILD-TYPE 
               11               567 
[1] "METTL6 MUTATION ANALYSIS"
[1] 3
  METTL6 MUTATED METTL6 WILD-TYPE 
               5              573 
  METTL6 MUTATED METTL6 WILD-TYPE 
               5              573 
[1] "TRIP10 MUTATION ANALYSIS"
[1] 3
  TRIP10 MUTATED TRIP10 WILD-TYPE 
              15              563 
  TRIP10 MUTATED TRIP10 WILD-TYPE 
              15              563 
[1] "C19ORF70 MUTATION ANALYSIS"
[1] 3
  C19ORF70 MUTATED C19ORF70 WILD-TYPE 
                 7                571 
  C19ORF70 MUTATED C19ORF70 WILD-TYPE 
                 7                571 
[1] "C16ORF70 MUTATION ANALYSIS"
[1] 3
  C16ORF70 MUTATED C16ORF70 WILD-TYPE 
                 7                571 
  C16ORF70 MUTATED C16ORF70 WILD-TYPE 
                 7                571 
[1] "MARCH7 MUTATION ANALYSIS"
[1] 3
  MARCH7 MUTATED MARCH7 WILD-TYPE 
               9              569 
  MARCH7 MUTATED MARCH7 WILD-TYPE 
               9              569 
[1] "PPP1R15A MUTATION ANALYSIS"
[1] 3
  PPP1R15A MUTATED PPP1R15A WILD-TYPE 
                 7                571 
  PPP1R15A MUTATED PPP1R15A WILD-TYPE 
                 7                571 
[1] "USP13 MUTATION ANALYSIS"
[1] 3
  USP13 MUTATED USP13 WILD-TYPE 
             13             565 
  USP13 MUTATED USP13 WILD-TYPE 
             13             565 
[1] "DOK1 MUTATION ANALYSIS"
[1] 3
  DOK1 MUTATED DOK1 WILD-TYPE 
             7            571 
  DOK1 MUTATED DOK1 WILD-TYPE 
             7            571 
[1] "CD33 MUTATION ANALYSIS"
[1] 3
  CD33 MUTATED CD33 WILD-TYPE 
            11            567 
  CD33 MUTATED CD33 WILD-TYPE 
            11            567 
[1] "MYLK3 MUTATION ANALYSIS"
[1] 3
  MYLK3 MUTATED MYLK3 WILD-TYPE 
             12             566 
  MYLK3 MUTATED MYLK3 WILD-TYPE 
             12             566 
[1] "GPATCH4 MUTATION ANALYSIS"
[1] 3
  GPATCH4 MUTATED GPATCH4 WILD-TYPE 
               13               565 
  GPATCH4 MUTATED GPATCH4 WILD-TYPE 
               13               565 
[1] "CADPS2 MUTATION ANALYSIS"
[1] 3
  CADPS2 MUTATED CADPS2 WILD-TYPE 
              12              566 
  CADPS2 MUTATED CADPS2 WILD-TYPE 
              12              566 
[1] "LTBP3 MUTATION ANALYSIS"
[1] 3
  LTBP3 MUTATED LTBP3 WILD-TYPE 
             22             556 
  LTBP3 MUTATED LTBP3 WILD-TYPE 
             22             556 
[1] "GALNTL1 MUTATION ANALYSIS"
[1] 3
  GALNTL1 MUTATED GALNTL1 WILD-TYPE 
               13               565 
  GALNTL1 MUTATED GALNTL1 WILD-TYPE 
               13               565 
[1] "RGS12 MUTATION ANALYSIS"
[1] 3
  RGS12 MUTATED RGS12 WILD-TYPE 
             38             540 
  RGS12 MUTATED RGS12 WILD-TYPE 
             38             540 
[1] "PLA2G15 MUTATION ANALYSIS"
[1] 3
  PLA2G15 MUTATED PLA2G15 WILD-TYPE 
               13               565 
  PLA2G15 MUTATED PLA2G15 WILD-TYPE 
               13               565 
[1] "SPTA1 MUTATION ANALYSIS"
[1] 3
  SPTA1 MUTATED SPTA1 WILD-TYPE 
             94             484 
  SPTA1 MUTATED SPTA1 WILD-TYPE 
             94             484 
[1] "ZNF292 MUTATION ANALYSIS"
[1] 3
  ZNF292 MUTATED ZNF292 WILD-TYPE 
              40              538 
  ZNF292 MUTATED ZNF292 WILD-TYPE 
              40              538 
[1] "ART5 MUTATION ANALYSIS"
[1] 3
  ART5 MUTATED ART5 WILD-TYPE 
             6            572 
  ART5 MUTATED ART5 WILD-TYPE 
             6            572 
[1] "CCDC80 MUTATION ANALYSIS"
[1] 3
  CCDC80 MUTATED CCDC80 WILD-TYPE 
              23              555 
  CCDC80 MUTATED CCDC80 WILD-TYPE 
              23              555 
[1] "ACAT1 MUTATION ANALYSIS"
[1] 3
  ACAT1 MUTATED ACAT1 WILD-TYPE 
              9             569 
  ACAT1 MUTATED ACAT1 WILD-TYPE 
              9             569 
[1] "ZCRB1 MUTATION ANALYSIS"
[1] 3
  ZCRB1 MUTATED ZCRB1 WILD-TYPE 
              7             571 
  ZCRB1 MUTATED ZCRB1 WILD-TYPE 
              7             571 
[1] "PLA2G7 MUTATION ANALYSIS"
[1] 3
  PLA2G7 MUTATED PLA2G7 WILD-TYPE 
               8              570 
  PLA2G7 MUTATED PLA2G7 WILD-TYPE 
               8              570 
[1] "FBN3 MUTATION ANALYSIS"
[1] 3
  FBN3 MUTATED FBN3 WILD-TYPE 
            43            535 
  FBN3 MUTATED FBN3 WILD-TYPE 
            43            535 
[1] "CA2 MUTATION ANALYSIS"
[1] 3
  CA2 MUTATED CA2 WILD-TYPE 
            7           571 
  CA2 MUTATED CA2 WILD-TYPE 
            7           571 
[1] "GTF3C4 MUTATION ANALYSIS"
[1] 3
  GTF3C4 MUTATED GTF3C4 WILD-TYPE 
              14              564 
  GTF3C4 MUTATED GTF3C4 WILD-TYPE 
              14              564 
[1] "TERF1 MUTATION ANALYSIS"
[1] 3
  TERF1 MUTATED TERF1 WILD-TYPE 
             10             568 
  TERF1 MUTATED TERF1 WILD-TYPE 
             10             568 
[1] "PLEKHO1 MUTATION ANALYSIS"
[1] 3
  PLEKHO1 MUTATED PLEKHO1 WILD-TYPE 
                8               570 
  PLEKHO1 MUTATED PLEKHO1 WILD-TYPE 
                8               570 
[1] "FAM109B MUTATION ANALYSIS"
[1] 3
  FAM109B MUTATED FAM109B WILD-TYPE 
                8               570 
  FAM109B MUTATED FAM109B WILD-TYPE 
                8               570 
[1] "DNAH7 MUTATION ANALYSIS"
[1] 3
  DNAH7 MUTATED DNAH7 WILD-TYPE 
             69             509 
  DNAH7 MUTATED DNAH7 WILD-TYPE 
             69             509 
[1] "MAP7D3 MUTATION ANALYSIS"
[1] 3
  MAP7D3 MUTATED MAP7D3 WILD-TYPE 
              18              560 
  MAP7D3 MUTATED MAP7D3 WILD-TYPE 
              18              560 
[1] "SFRS18 MUTATION ANALYSIS"
[1] 3
  SFRS18 MUTATED SFRS18 WILD-TYPE 
              20              558 
  SFRS18 MUTATED SFRS18 WILD-TYPE 
              20              558 
[1] "PRPF4B MUTATION ANALYSIS"
[1] 3
  PRPF4B MUTATED PRPF4B WILD-TYPE 
              12              566 
  PRPF4B MUTATED PRPF4B WILD-TYPE 
              12              566 
[1] "SP100 MUTATION ANALYSIS"
[1] 3
  SP100 MUTATED SP100 WILD-TYPE 
             25             553 
  SP100 MUTATED SP100 WILD-TYPE 
             25             553 
[1] "UHRF1BP1 MUTATION ANALYSIS"
[1] 3
  UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE 
                21                557 
  UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE 
                21                557 
[1] "MRGPRF MUTATION ANALYSIS"
[1] 3
  MRGPRF MUTATED MRGPRF WILD-TYPE 
               7              571 
  MRGPRF MUTATED MRGPRF WILD-TYPE 
               7              571 
[1] "ELL2 MUTATION ANALYSIS"
[1] 3
  ELL2 MUTATED ELL2 WILD-TYPE 
            17            561 
  ELL2 MUTATED ELL2 WILD-TYPE 
            17            561 
[1] "PCGF3 MUTATION ANALYSIS"
[1] 3
  PCGF3 MUTATED PCGF3 WILD-TYPE 
              7             571 
  PCGF3 MUTATED PCGF3 WILD-TYPE 
              7             571 
[1] "RSF1 MUTATION ANALYSIS"
[1] 3
  RSF1 MUTATED RSF1 WILD-TYPE 
            16            562 
  RSF1 MUTATED RSF1 WILD-TYPE 
            16            562 
[1] "ARID1B MUTATION ANALYSIS"
[1] 3
  ARID1B MUTATED ARID1B WILD-TYPE 
              37              541 
  ARID1B MUTATED ARID1B WILD-TYPE 
              37              541 
[1] "TNK2 MUTATION ANALYSIS"
[1] 3
  TNK2 MUTATED TNK2 WILD-TYPE 
            22            556 
  TNK2 MUTATED TNK2 WILD-TYPE 
            22            556 
[1] "ABCE1 MUTATION ANALYSIS"
[1] 3
  ABCE1 MUTATED ABCE1 WILD-TYPE 
             12             566 
  ABCE1 MUTATED ABCE1 WILD-TYPE 
             12             566 
[1] "PNMT MUTATION ANALYSIS"
[1] 3
  PNMT MUTATED PNMT WILD-TYPE 
            11            567 
  PNMT MUTATED PNMT WILD-TYPE 
            11            567 
[1] "C8ORF46 MUTATION ANALYSIS"
[1] 3
  C8ORF46 MUTATED C8ORF46 WILD-TYPE 
                9               569 
  C8ORF46 MUTATED C8ORF46 WILD-TYPE 
                9               569 
[1] "NOX5 MUTATION ANALYSIS"
[1] 3
  NOX5 MUTATED NOX5 WILD-TYPE 
            17            561 
  NOX5 MUTATED NOX5 WILD-TYPE 
            17            561 
[1] "SGK3 MUTATION ANALYSIS"
[1] 3
  SGK3 MUTATED SGK3 WILD-TYPE 
             9            569 
  SGK3 MUTATED SGK3 WILD-TYPE 
             9            569 
[1] "ZFC3H1 MUTATION ANALYSIS"
[1] 3
  ZFC3H1 MUTATED ZFC3H1 WILD-TYPE 
              22              556 
  ZFC3H1 MUTATED ZFC3H1 WILD-TYPE 
              22              556 
[1] "TAS2R42 MUTATION ANALYSIS"
[1] 3
  TAS2R42 MUTATED TAS2R42 WILD-TYPE 
                6               572 
  TAS2R42 MUTATED TAS2R42 WILD-TYPE 
                6               572 
[1] "CDKL3 MUTATION ANALYSIS"
[1] 3
  CDKL3 MUTATED CDKL3 WILD-TYPE 
              8             570 
  CDKL3 MUTATED CDKL3 WILD-TYPE 
              8             570 
[1] "USP21 MUTATION ANALYSIS"
[1] 3
  USP21 MUTATED USP21 WILD-TYPE 
             15             563 
  USP21 MUTATED USP21 WILD-TYPE 
             15             563 
[1] "SERPINB12 MUTATION ANALYSIS"
[1] 3
  SERPINB12 MUTATED SERPINB12 WILD-TYPE 
                  9                 569 
  SERPINB12 MUTATED SERPINB12 WILD-TYPE 
                  9                 569 
[1] "GCG MUTATION ANALYSIS"
[1] 3
  GCG MUTATED GCG WILD-TYPE 
           10           568 
  GCG MUTATED GCG WILD-TYPE 
           10           568 
[1] "DYRK4 MUTATION ANALYSIS"
[1] 3
  DYRK4 MUTATED DYRK4 WILD-TYPE 
             11             567 
  DYRK4 MUTATED DYRK4 WILD-TYPE 
             11             567 
[1] "LINGO4 MUTATION ANALYSIS"
[1] 3
  LINGO4 MUTATED LINGO4 WILD-TYPE 
              12              566 
  LINGO4 MUTATED LINGO4 WILD-TYPE 
              12              566 
[1] "ZDHHC7 MUTATION ANALYSIS"
[1] 3
  ZDHHC7 MUTATED ZDHHC7 WILD-TYPE 
               9              569 
  ZDHHC7 MUTATED ZDHHC7 WILD-TYPE 
               9              569 
[1] "CNNM2 MUTATION ANALYSIS"
[1] 3
  CNNM2 MUTATED CNNM2 WILD-TYPE 
             18             560 
  CNNM2 MUTATED CNNM2 WILD-TYPE 
             18             560 
[1] "CNNM1 MUTATION ANALYSIS"
[1] 3
  CNNM1 MUTATED CNNM1 WILD-TYPE 
             13             565 
  CNNM1 MUTATED CNNM1 WILD-TYPE 
             13             565 
[1] "AFF3 MUTATION ANALYSIS"
[1] 3
  AFF3 MUTATED AFF3 WILD-TYPE 
            34            544 
  AFF3 MUTATED AFF3 WILD-TYPE 
            34            544 
[1] "PPIAL4A MUTATION ANALYSIS"
[1] 3
  PPIAL4A MUTATED PPIAL4A WILD-TYPE 
                3               575 
  PPIAL4A MUTATED PPIAL4A WILD-TYPE 
                3               575 
[1] "MKL2 MUTATION ANALYSIS"
[1] 3
  MKL2 MUTATED MKL2 WILD-TYPE 
            18            560 
  MKL2 MUTATED MKL2 WILD-TYPE 
            18            560 
[1] "PLAG1 MUTATION ANALYSIS"
[1] 3
  PLAG1 MUTATED PLAG1 WILD-TYPE 
             14             564 
  PLAG1 MUTATED PLAG1 WILD-TYPE 
             14             564 
[1] "EXPH5 MUTATION ANALYSIS"
[1] 3
  EXPH5 MUTATED EXPH5 WILD-TYPE 
             17             561 
  EXPH5 MUTATED EXPH5 WILD-TYPE 
             17             561 
[1] "ARMC4 MUTATION ANALYSIS"
[1] 3
  ARMC4 MUTATED ARMC4 WILD-TYPE 
             26             552 
  ARMC4 MUTATED ARMC4 WILD-TYPE 
             26             552 
[1] "MAGEE2 MUTATION ANALYSIS"
[1] 3
  MAGEE2 MUTATED MAGEE2 WILD-TYPE 
              17              561 
  MAGEE2 MUTATED MAGEE2 WILD-TYPE 
              17              561 
[1] "FGF1 MUTATION ANALYSIS"
[1] 3
  FGF1 MUTATED FGF1 WILD-TYPE 
             5            573 
  FGF1 MUTATED FGF1 WILD-TYPE 
             5            573 
[1] "KIF13A MUTATION ANALYSIS"
[1] 3
  KIF13A MUTATED KIF13A WILD-TYPE 
              25              553 
  KIF13A MUTATED KIF13A WILD-TYPE 
              25              553 
[1] "GLT8D1 MUTATION ANALYSIS"
[1] 3
  GLT8D1 MUTATED GLT8D1 WILD-TYPE 
               7              571 
  GLT8D1 MUTATED GLT8D1 WILD-TYPE 
               7              571 
[1] "SMARCB1 MUTATION ANALYSIS"
[1] 3
  SMARCB1 MUTATED SMARCB1 WILD-TYPE 
               16               562 
  SMARCB1 MUTATED SMARCB1 WILD-TYPE 
               16               562 
[1] "PRRG3 MUTATION ANALYSIS"
[1] 3
  PRRG3 MUTATED PRRG3 WILD-TYPE 
             10             568 
  PRRG3 MUTATED PRRG3 WILD-TYPE 
             10             568 
[1] "CSGALNACT1 MUTATION ANALYSIS"
[1] 3
  CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE 
                  19                  559 
  CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE 
                  19                  559 
[1] "BEND3 MUTATION ANALYSIS"
[1] 3
  BEND3 MUTATED BEND3 WILD-TYPE 
             14             564 
  BEND3 MUTATED BEND3 WILD-TYPE 
             14             564 
[1] "TPD52L1 MUTATION ANALYSIS"
[1] 3
  TPD52L1 MUTATED TPD52L1 WILD-TYPE 
               13               565 
  TPD52L1 MUTATED TPD52L1 WILD-TYPE 
               13               565 
[1] "R3HDM2 MUTATION ANALYSIS"
[1] 3
  R3HDM2 MUTATED R3HDM2 WILD-TYPE 
              15              563 
  R3HDM2 MUTATED R3HDM2 WILD-TYPE 
              15              563 
[1] "INPP5F MUTATION ANALYSIS"
[1] 3
  INPP5F MUTATED INPP5F WILD-TYPE 
              21              557 
  INPP5F MUTATED INPP5F WILD-TYPE 
              21              557 
[1] "KIAA1632 MUTATION ANALYSIS"
[1] 3
  KIAA1632 MUTATED KIAA1632 WILD-TYPE 
                33                545 
  KIAA1632 MUTATED KIAA1632 WILD-TYPE 
                33                545 
[1] "PHACTR1 MUTATION ANALYSIS"
[1] 3
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
               11               567 
  PHACTR1 MUTATED PHACTR1 WILD-TYPE 
               11               567 
[1] "PHACTR4 MUTATION ANALYSIS"
[1] 3
  PHACTR4 MUTATED PHACTR4 WILD-TYPE 
               12               566 
  PHACTR4 MUTATED PHACTR4 WILD-TYPE 
               12               566 
[1] "MRPS5 MUTATION ANALYSIS"
[1] 3
  MRPS5 MUTATED MRPS5 WILD-TYPE 
              9             569 
  MRPS5 MUTATED MRPS5 WILD-TYPE 
              9             569 
[1] "SLC38A6 MUTATION ANALYSIS"
[1] 3
  SLC38A6 MUTATED SLC38A6 WILD-TYPE 
               10               568 
  SLC38A6 MUTATED SLC38A6 WILD-TYPE 
               10               568 
[1] "PDS5A MUTATION ANALYSIS"
[1] 3
  PDS5A MUTATED PDS5A WILD-TYPE 
             24             554 
  PDS5A MUTATED PDS5A WILD-TYPE 
             24             554 
[1] "KLHL14 MUTATION ANALYSIS"
[1] 3
  KLHL14 MUTATED KLHL14 WILD-TYPE 
              20              558 
  KLHL14 MUTATED KLHL14 WILD-TYPE 
              20              558 
[1] "F8 MUTATION ANALYSIS"
[1] 3
  F8 MUTATED F8 WILD-TYPE 
          38          540 
  F8 MUTATED F8 WILD-TYPE 
          38          540 
[1] "PLAGL2 MUTATION ANALYSIS"
[1] 3
  PLAGL2 MUTATED PLAGL2 WILD-TYPE 
               9              569 
  PLAGL2 MUTATED PLAGL2 WILD-TYPE 
               9              569 
[1] "C8ORF38 MUTATION ANALYSIS"
[1] 3
  C8ORF38 MUTATED C8ORF38 WILD-TYPE 
                9               569 
  C8ORF38 MUTATED C8ORF38 WILD-TYPE 
                9               569 
[1] "SIX3 MUTATION ANALYSIS"
[1] 3
  SIX3 MUTATED SIX3 WILD-TYPE 
            12            566 
  SIX3 MUTATED SIX3 WILD-TYPE 
            12            566 
[1] "ACAA2 MUTATION ANALYSIS"
[1] 3
  ACAA2 MUTATED ACAA2 WILD-TYPE 
             12             566 
  ACAA2 MUTATED ACAA2 WILD-TYPE 
             12             566 
[1] "DDX43 MUTATION ANALYSIS"
[1] 3
  DDX43 MUTATED DDX43 WILD-TYPE 
             14             564 
  DDX43 MUTATED DDX43 WILD-TYPE 
             14             564 
[1] "ASTE1 MUTATION ANALYSIS"
[1] 3
  ASTE1 MUTATED ASTE1 WILD-TYPE 
             19             559 
  ASTE1 MUTATED ASTE1 WILD-TYPE 
             19             559 
[1] "CDC42EP1 MUTATION ANALYSIS"
[1] 3
  CDC42EP1 MUTATED CDC42EP1 WILD-TYPE 
                 4                574 
  CDC42EP1 MUTATED CDC42EP1 WILD-TYPE 
                 4                574 
[1] "KCTD3 MUTATION ANALYSIS"
[1] 3
  KCTD3 MUTATED KCTD3 WILD-TYPE 
             15             563 
  KCTD3 MUTATED KCTD3 WILD-TYPE 
             15             563 
[1] "NHLRC1 MUTATION ANALYSIS"
[1] 3
  NHLRC1 MUTATED NHLRC1 WILD-TYPE 
              12              566 
  NHLRC1 MUTATED NHLRC1 WILD-TYPE 
              12              566 
[1] "RNASEH2B MUTATION ANALYSIS"
[1] 3
  RNASEH2B MUTATED RNASEH2B WILD-TYPE 
                 4                574 
  RNASEH2B MUTATED RNASEH2B WILD-TYPE 
                 4                574 
[1] "HRNR MUTATION ANALYSIS"
[1] 3
  HRNR MUTATED HRNR WILD-TYPE 
            50            528 
  HRNR MUTATED HRNR WILD-TYPE 
            50            528 
[1] "RDBP MUTATION ANALYSIS"
[1] 3
  RDBP MUTATED RDBP WILD-TYPE 
            13            565 
  RDBP MUTATED RDBP WILD-TYPE 
            13            565 
[1] "TNFSF13 MUTATION ANALYSIS"
[1] 3
  TNFSF13 MUTATED TNFSF13 WILD-TYPE 
                3               575 
  TNFSF13 MUTATED TNFSF13 WILD-TYPE 
                3               575 
[1] "MCEE MUTATION ANALYSIS"
[1] 3
  MCEE MUTATED MCEE WILD-TYPE 
             6            572 
  MCEE MUTATED MCEE WILD-TYPE 
             6            572 
[1] "OTX2 MUTATION ANALYSIS"
[1] 3
  OTX2 MUTATED OTX2 WILD-TYPE 
            11            567 
  OTX2 MUTATED OTX2 WILD-TYPE 
            11            567 
[1] "HAND2 MUTATION ANALYSIS"
[1] 3
  HAND2 MUTATED HAND2 WILD-TYPE 
              7             571 
  HAND2 MUTATED HAND2 WILD-TYPE 
              7             571 
[1] "SLC12A7 MUTATION ANALYSIS"
[1] 3
  SLC12A7 MUTATED SLC12A7 WILD-TYPE 
               30               548 
  SLC12A7 MUTATED SLC12A7 WILD-TYPE 
               30               548 
[1] "CD1E MUTATION ANALYSIS"
[1] 3
  CD1E MUTATED CD1E WILD-TYPE 
            17            561 
  CD1E MUTATED CD1E WILD-TYPE 
            17            561 
[1] "HEXDC MUTATION ANALYSIS"
[1] 3
  HEXDC MUTATED HEXDC WILD-TYPE 
              9             569 
  HEXDC MUTATED HEXDC WILD-TYPE 
              9             569 
[1] "C11ORF70 MUTATION ANALYSIS"
[1] 3
  C11ORF70 MUTATED C11ORF70 WILD-TYPE 
                 5                573 
  C11ORF70 MUTATED C11ORF70 WILD-TYPE 
                 5                573 
[1] "GRXCR1 MUTATION ANALYSIS"
[1] 3
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              18              560 
  GRXCR1 MUTATED GRXCR1 WILD-TYPE 
              18              560 
[1] "GPR141 MUTATION ANALYSIS"
[1] 3
  GPR141 MUTATED GPR141 WILD-TYPE 
              13              565 
  GPR141 MUTATED GPR141 WILD-TYPE 
              13              565 
[1] "NEK8 MUTATION ANALYSIS"
[1] 3
  NEK8 MUTATED NEK8 WILD-TYPE 
            14            564 
  NEK8 MUTATED NEK8 WILD-TYPE 
            14            564 
[1] "KRT222 MUTATION ANALYSIS"
[1] 3
  KRT222 MUTATED KRT222 WILD-TYPE 
               9              569 
  KRT222 MUTATED KRT222 WILD-TYPE 
               9              569 
[1] "GIMAP7 MUTATION ANALYSIS"
[1] 3
  GIMAP7 MUTATED GIMAP7 WILD-TYPE 
               6              572 
  GIMAP7 MUTATED GIMAP7 WILD-TYPE 
               6              572 
[1] "PRMT3 MUTATION ANALYSIS"
[1] 3
  PRMT3 MUTATED PRMT3 WILD-TYPE 
             11             567 
  PRMT3 MUTATED PRMT3 WILD-TYPE 
             11             567 
[1] "C20ORF160 MUTATION ANALYSIS"
[1] 3
  C20ORF160 MUTATED C20ORF160 WILD-TYPE 
                  8                 570 
  C20ORF160 MUTATED C20ORF160 WILD-TYPE 
                  8                 570 
[1] "ACTL6A MUTATION ANALYSIS"
[1] 3
  ACTL6A MUTATED ACTL6A WILD-TYPE 
               8              570 
  ACTL6A MUTATED ACTL6A WILD-TYPE 
               8              570 
[1] "PMEPA1 MUTATION ANALYSIS"
[1] 3
  PMEPA1 MUTATED PMEPA1 WILD-TYPE 
               7              571 
  PMEPA1 MUTATED PMEPA1 WILD-TYPE 
               7              571 
[1] "PTPLA MUTATION ANALYSIS"
[1] 3
  PTPLA MUTATED PTPLA WILD-TYPE 
              7             571 
  PTPLA MUTATED PTPLA WILD-TYPE 
              7             571 
[1] "PNLIPRP3 MUTATION ANALYSIS"
[1] 3
  PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE 
                17                561 
  PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE 
                17                561 
[1] "KIAA1797 MUTATION ANALYSIS"
[1] 3
  KIAA1797 MUTATED KIAA1797 WILD-TYPE 
                25                553 
  KIAA1797 MUTATED KIAA1797 WILD-TYPE 
                25                553 
[1] "UBQLN2 MUTATION ANALYSIS"
[1] 3
  UBQLN2 MUTATED UBQLN2 WILD-TYPE 
              11              567 
  UBQLN2 MUTATED UBQLN2 WILD-TYPE 
              11              567 
[1] "CYP51A1 MUTATION ANALYSIS"
[1] 3
  CYP51A1 MUTATED CYP51A1 WILD-TYPE 
               13               565 
  CYP51A1 MUTATED CYP51A1 WILD-TYPE 
               13               565 
[1] "AMZ2 MUTATION ANALYSIS"
[1] 3
  AMZ2 MUTATED AMZ2 WILD-TYPE 
             5            573 
  AMZ2 MUTATED AMZ2 WILD-TYPE 
             5            573 
[1] "CD58 MUTATION ANALYSIS"
[1] 3
  CD58 MUTATED CD58 WILD-TYPE 
             8            570 
  CD58 MUTATED CD58 WILD-TYPE 
             8            570 
[1] "SDAD1 MUTATION ANALYSIS"
[1] 3
  SDAD1 MUTATED SDAD1 WILD-TYPE 
              9             569 
  SDAD1 MUTATED SDAD1 WILD-TYPE 
              9             569 
[1] "ANKRD23 MUTATION ANALYSIS"
[1] 3
  ANKRD23 MUTATED ANKRD23 WILD-TYPE 
                8               570 
  ANKRD23 MUTATED ANKRD23 WILD-TYPE 
                8               570 
[1] "ACTR8 MUTATION ANALYSIS"
[1] 3
  ACTR8 MUTATED ACTR8 WILD-TYPE 
             12             566 
  ACTR8 MUTATED ACTR8 WILD-TYPE 
             12             566 
[1] "IFT140 MUTATION ANALYSIS"
[1] 3
  IFT140 MUTATED IFT140 WILD-TYPE 
              23              555 
  IFT140 MUTATED IFT140 WILD-TYPE 
              23              555 
[1] "GSDMC MUTATION ANALYSIS"
[1] 3
  GSDMC MUTATED GSDMC WILD-TYPE 
             19             559 
  GSDMC MUTATED GSDMC WILD-TYPE 
             19             559 
[1] "ANK3 MUTATION ANALYSIS"
[1] 3
  ANK3 MUTATED ANK3 WILD-TYPE 
            63            515 
  ANK3 MUTATED ANK3 WILD-TYPE 
            63            515 
[1] "TMEM87B MUTATION ANALYSIS"
[1] 3
  TMEM87B MUTATED TMEM87B WILD-TYPE 
                6               572 
  TMEM87B MUTATED TMEM87B WILD-TYPE 
                6               572 
[1] "CCDC103 MUTATION ANALYSIS"
[1] 3
  CCDC103 MUTATED CCDC103 WILD-TYPE 
                5               573 
  CCDC103 MUTATED CCDC103 WILD-TYPE 
                5               573 
[1] "AXIN1 MUTATION ANALYSIS"
[1] 3
  AXIN1 MUTATED AXIN1 WILD-TYPE 
             16             562 
  AXIN1 MUTATED AXIN1 WILD-TYPE 
             16             562 
[1] "CTSD MUTATION ANALYSIS"
[1] 3
  CTSD MUTATED CTSD WILD-TYPE 
            11            567 
  CTSD MUTATED CTSD WILD-TYPE 
            11            567 
[1] "BAT4 MUTATION ANALYSIS"
[1] 3
  BAT4 MUTATED BAT4 WILD-TYPE 
             6            572 
  BAT4 MUTATED BAT4 WILD-TYPE 
             6            572 
[1] "OSTALPHA MUTATION ANALYSIS"
[1] 3
  OSTALPHA MUTATED OSTALPHA WILD-TYPE 
                 5                573 
  OSTALPHA MUTATED OSTALPHA WILD-TYPE 
                 5                573 
[1] "FNDC4 MUTATION ANALYSIS"
[1] 3
  FNDC4 MUTATED FNDC4 WILD-TYPE 
              6             572 
  FNDC4 MUTATED FNDC4 WILD-TYPE 
              6             572 
[1] "FBXO48 MUTATION ANALYSIS"
[1] 3
  FBXO48 MUTATED FBXO48 WILD-TYPE 
               5              573 
  FBXO48 MUTATED FBXO48 WILD-TYPE 
               5              573 
[1] "UGT1A4 MUTATION ANALYSIS"
[1] 3
  UGT1A4 MUTATED UGT1A4 WILD-TYPE 
              12              566 
  UGT1A4 MUTATED UGT1A4 WILD-TYPE 
              12              566 
[1] "FAM113A MUTATION ANALYSIS"
[1] 3
  FAM113A MUTATED FAM113A WILD-TYPE 
               10               568 
  FAM113A MUTATED FAM113A WILD-TYPE 
               10               568 
[1] "BAT3 MUTATION ANALYSIS"
[1] 3
  BAT3 MUTATED BAT3 WILD-TYPE 
            15            563 
  BAT3 MUTATED BAT3 WILD-TYPE 
            15            563 
[1] "TRIML2 MUTATION ANALYSIS"
[1] 3
  TRIML2 MUTATED TRIML2 WILD-TYPE 
              24              554 
  TRIML2 MUTATED TRIML2 WILD-TYPE 
              24              554 
[1] "CTSA MUTATION ANALYSIS"
[1] 3
  CTSA MUTATED CTSA WILD-TYPE 
             5            573 
  CTSA MUTATED CTSA WILD-TYPE 
             5            573 
[1] "ATP6V1C2 MUTATION ANALYSIS"
[1] 3
  ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE 
                16                562 
  ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE 
                16                562 
[1] "AKAP11 MUTATION ANALYSIS"
[1] 3
  AKAP11 MUTATED AKAP11 WILD-TYPE 
              19              559 
  AKAP11 MUTATED AKAP11 WILD-TYPE 
              19              559 
[1] "RBMX MUTATION ANALYSIS"
[1] 3
  RBMX MUTATED RBMX WILD-TYPE 
            10            568 
  RBMX MUTATED RBMX WILD-TYPE 
            10            568 
[1] "GNPNAT1 MUTATION ANALYSIS"
[1] 3
  GNPNAT1 MUTATED GNPNAT1 WILD-TYPE 
                6               572 
  GNPNAT1 MUTATED GNPNAT1 WILD-TYPE 
                6               572 
[1] "PTPN23 MUTATION ANALYSIS"
[1] 3
  PTPN23 MUTATED PTPN23 WILD-TYPE 
              26              552 
  PTPN23 MUTATED PTPN23 WILD-TYPE 
              26              552 
[1] "AGAP6 MUTATION ANALYSIS"
[1] 3
  AGAP6 MUTATED AGAP6 WILD-TYPE 
             11             567 
  AGAP6 MUTATED AGAP6 WILD-TYPE 
             11             567 
[1] "PPARGC1B MUTATION ANALYSIS"
[1] 3
  PPARGC1B MUTATED PPARGC1B WILD-TYPE 
                11                567 
  PPARGC1B MUTATED PPARGC1B WILD-TYPE 
                11                567 
[1] "ACTG2 MUTATION ANALYSIS"
[1] 3
  ACTG2 MUTATED ACTG2 WILD-TYPE 
             12             566 
  ACTG2 MUTATED ACTG2 WILD-TYPE 
             12             566 
[1] "SMTN MUTATION ANALYSIS"
[1] 3
  SMTN MUTATED SMTN WILD-TYPE 
            21            557 
  SMTN MUTATED SMTN WILD-TYPE 
            21            557 
[1] "C9ORF46 MUTATION ANALYSIS"
[1] 3
  C9ORF46 MUTATED C9ORF46 WILD-TYPE 
                5               573 
  C9ORF46 MUTATED C9ORF46 WILD-TYPE 
                5               573 
[1] "KCNMB2 MUTATION ANALYSIS"
[1] 3
  KCNMB2 MUTATED KCNMB2 WILD-TYPE 
              10              568 
  KCNMB2 MUTATED KCNMB2 WILD-TYPE 
              10              568 
[1] "C9ORF152 MUTATION ANALYSIS"
[1] 3
  C9ORF152 MUTATED C9ORF152 WILD-TYPE 
                 4                574 
  C9ORF152 MUTATED C9ORF152 WILD-TYPE 
                 4                574 
[1] "ZFP36L1 MUTATION ANALYSIS"
[1] 3
  ZFP36L1 MUTATED ZFP36L1 WILD-TYPE 
                5               573 
  ZFP36L1 MUTATED ZFP36L1 WILD-TYPE 
                5               573 
[1] "HTR1F MUTATION ANALYSIS"
[1] 3
  HTR1F MUTATED HTR1F WILD-TYPE 
              9             569 
  HTR1F MUTATED HTR1F WILD-TYPE 
              9             569 
[1] "CDH24 MUTATION ANALYSIS"
[1] 3
  CDH24 MUTATED CDH24 WILD-TYPE 
             14             564 
  CDH24 MUTATED CDH24 WILD-TYPE 
             14             564 
[1] "HERC1 MUTATION ANALYSIS"
[1] 3
  HERC1 MUTATED HERC1 WILD-TYPE 
             49             529 
  HERC1 MUTATED HERC1 WILD-TYPE 
             49             529 
[1] "C1ORF14 MUTATION ANALYSIS"
[1] 3
  C1ORF14 MUTATED C1ORF14 WILD-TYPE 
               16               562 
  C1ORF14 MUTATED C1ORF14 WILD-TYPE 
               16               562 
[1] "PRPF40B MUTATION ANALYSIS"
[1] 3
  PRPF40B MUTATED PRPF40B WILD-TYPE 
               21               557 
  PRPF40B MUTATED PRPF40B WILD-TYPE 
               21               557 
[1] "SERPINA1 MUTATION ANALYSIS"
[1] 3
  SERPINA1 MUTATED SERPINA1 WILD-TYPE 
                 9                569 
  SERPINA1 MUTATED SERPINA1 WILD-TYPE 
                 9                569 
[1] "FZR1 MUTATION ANALYSIS"
[1] 3
  FZR1 MUTATED FZR1 WILD-TYPE 
            12            566 
  FZR1 MUTATED FZR1 WILD-TYPE 
            12            566 
[1] "BRF1 MUTATION ANALYSIS"
[1] 3
  BRF1 MUTATED BRF1 WILD-TYPE 
            11            567 
  BRF1 MUTATED BRF1 WILD-TYPE 
            11            567 
[1] "ESRP1 MUTATION ANALYSIS"
[1] 3
  ESRP1 MUTATED ESRP1 WILD-TYPE 
             11             567 
  ESRP1 MUTATED ESRP1 WILD-TYPE 
             11             567 
[1] "P2RY4 MUTATION ANALYSIS"
[1] 3
  P2RY4 MUTATED P2RY4 WILD-TYPE 
             13             565 
  P2RY4 MUTATED P2RY4 WILD-TYPE 
             13             565 
[1] "EPHA3 MUTATION ANALYSIS"
[1] 3
  EPHA3 MUTATED EPHA3 WILD-TYPE 
             36             542 
  EPHA3 MUTATED EPHA3 WILD-TYPE 
             36             542 
[1] "IDE MUTATION ANALYSIS"
[1] 3
  IDE MUTATED IDE WILD-TYPE 
           15           563 
  IDE MUTATED IDE WILD-TYPE 
           15           563 
[1] "C15ORF52 MUTATION ANALYSIS"
[1] 3
  C15ORF52 MUTATED C15ORF52 WILD-TYPE 
                 7                571 
  C15ORF52 MUTATED C15ORF52 WILD-TYPE 
                 7                571 
[1] "MARVELD3 MUTATION ANALYSIS"
[1] 3
  MARVELD3 MUTATED MARVELD3 WILD-TYPE 
                14                564 
  MARVELD3 MUTATED MARVELD3 WILD-TYPE 
                14                564 
[1] "C1ORF141 MUTATION ANALYSIS"
[1] 3
  C1ORF141 MUTATED C1ORF141 WILD-TYPE 
                12                566 
  C1ORF141 MUTATED C1ORF141 WILD-TYPE 
                12                566 
[1] "PKN1 MUTATION ANALYSIS"
[1] 3
  PKN1 MUTATED PKN1 WILD-TYPE 
            11            567 
  PKN1 MUTATED PKN1 WILD-TYPE 
            11            567 
[1] "PCF11 MUTATION ANALYSIS"
[1] 3
  PCF11 MUTATED PCF11 WILD-TYPE 
             23             555 
  PCF11 MUTATED PCF11 WILD-TYPE 
             23             555 
[1] "RASSF5 MUTATION ANALYSIS"
[1] 3
  RASSF5 MUTATED RASSF5 WILD-TYPE 
               6              572 
  RASSF5 MUTATED RASSF5 WILD-TYPE 
               6              572 
[1] "SLC10A6 MUTATION ANALYSIS"
[1] 3
  SLC10A6 MUTATED SLC10A6 WILD-TYPE 
               10               568 
  SLC10A6 MUTATED SLC10A6 WILD-TYPE 
               10               568 
[1] "OSGEPL1 MUTATION ANALYSIS"
[1] 3
  OSGEPL1 MUTATED OSGEPL1 WILD-TYPE 
                4               574 
  OSGEPL1 MUTATED OSGEPL1 WILD-TYPE 
                4               574 
[1] "TSSK2 MUTATION ANALYSIS"
[1] 3
  TSSK2 MUTATED TSSK2 WILD-TYPE 
             10             568 
  TSSK2 MUTATED TSSK2 WILD-TYPE 
             10             568 
[1] "DNAJC1 MUTATION ANALYSIS"
[1] 3
  DNAJC1 MUTATED DNAJC1 WILD-TYPE 
              14              564 
  DNAJC1 MUTATED DNAJC1 WILD-TYPE 
              14              564 
[1] "KPNA3 MUTATION ANALYSIS"
[1] 3
  KPNA3 MUTATED KPNA3 WILD-TYPE 
             10             568 
  KPNA3 MUTATED KPNA3 WILD-TYPE 
             10             568 
[1] "RRH MUTATION ANALYSIS"
[1] 3
  RRH MUTATED RRH WILD-TYPE 
            5           573 
  RRH MUTATED RRH WILD-TYPE 
            5           573 
[1] "SRP14 MUTATION ANALYSIS"
[1] 3
  SRP14 MUTATED SRP14 WILD-TYPE 
              3             575 
  SRP14 MUTATED SRP14 WILD-TYPE 
              3             575 
[1] "PDE8A MUTATION ANALYSIS"
[1] 3
  PDE8A MUTATED PDE8A WILD-TYPE 
             14             564 
  PDE8A MUTATED PDE8A WILD-TYPE 
             14             564 
[1] "ARPC5L MUTATION ANALYSIS"
[1] 3
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               3              575 
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               3              575 
[1] "UPK2 MUTATION ANALYSIS"
[1] 3
  UPK2 MUTATED UPK2 WILD-TYPE 
             5            573 
  UPK2 MUTATED UPK2 WILD-TYPE 
             5            573 
[1] "NEUROD6 MUTATION ANALYSIS"
[1] 3
  NEUROD6 MUTATED NEUROD6 WILD-TYPE 
                7               571 
  NEUROD6 MUTATED NEUROD6 WILD-TYPE 
                7               571 
[1] "KIF20B MUTATION ANALYSIS"
[1] 3
  KIF20B MUTATED KIF20B WILD-TYPE 
              22              556 
  KIF20B MUTATED KIF20B WILD-TYPE 
              22              556 
[1] "NPHS1 MUTATION ANALYSIS"
[1] 3
  NPHS1 MUTATED NPHS1 WILD-TYPE 
             21             557 
  NPHS1 MUTATED NPHS1 WILD-TYPE 
             21             557 
[1] "NUFIP2 MUTATION ANALYSIS"
[1] 3
  NUFIP2 MUTATED NUFIP2 WILD-TYPE 
               8              570 
  NUFIP2 MUTATED NUFIP2 WILD-TYPE 
               8              570 
[1] "MED23 MUTATION ANALYSIS"
[1] 3
  MED23 MUTATED MED23 WILD-TYPE 
             23             555 
  MED23 MUTATED MED23 WILD-TYPE 
             23             555 
[1] "FBXO34 MUTATION ANALYSIS"
[1] 3
  FBXO34 MUTATED FBXO34 WILD-TYPE 
              13              565 
  FBXO34 MUTATED FBXO34 WILD-TYPE 
              13              565 
[1] "SH2B1 MUTATION ANALYSIS"
[1] 3
  SH2B1 MUTATED SH2B1 WILD-TYPE 
             13             565 
  SH2B1 MUTATED SH2B1 WILD-TYPE 
             13             565 
[1] "P2RX1 MUTATION ANALYSIS"
[1] 3
  P2RX1 MUTATED P2RX1 WILD-TYPE 
              5             573 
  P2RX1 MUTATED P2RX1 WILD-TYPE 
              5             573 
[1] "SAP30BP MUTATION ANALYSIS"
[1] 3
  SAP30BP MUTATED SAP30BP WILD-TYPE 
                7               571 
  SAP30BP MUTATED SAP30BP WILD-TYPE 
                7               571 
[1] "NCEH1 MUTATION ANALYSIS"
[1] 3
  NCEH1 MUTATED NCEH1 WILD-TYPE 
              8             570 
  NCEH1 MUTATED NCEH1 WILD-TYPE 
              8             570 
[1] "ANTXR1 MUTATION ANALYSIS"
[1] 3
  ANTXR1 MUTATED ANTXR1 WILD-TYPE 
              12              566 
  ANTXR1 MUTATED ANTXR1 WILD-TYPE 
              12              566 
[1] "BLMH MUTATION ANALYSIS"
[1] 3
  BLMH MUTATED BLMH WILD-TYPE 
             5            573 
  BLMH MUTATED BLMH WILD-TYPE 
             5            573 
[1] "ZNF207 MUTATION ANALYSIS"
[1] 3
  ZNF207 MUTATED ZNF207 WILD-TYPE 
              10              568 
  ZNF207 MUTATED ZNF207 WILD-TYPE 
              10              568 
[1] "SIGLEC10 MUTATION ANALYSIS"
[1] 3
  SIGLEC10 MUTATED SIGLEC10 WILD-TYPE 
                16                562 
  SIGLEC10 MUTATED SIGLEC10 WILD-TYPE 
                16                562 
[1] "FAHD2A MUTATION ANALYSIS"
[1] 3
  FAHD2A MUTATED FAHD2A WILD-TYPE 
               9              569 
  FAHD2A MUTATED FAHD2A WILD-TYPE 
               9              569 
[1] "NUFIP1 MUTATION ANALYSIS"
[1] 3
  NUFIP1 MUTATED NUFIP1 WILD-TYPE 
              13              565 
  NUFIP1 MUTATED NUFIP1 WILD-TYPE 
              13              565 
[1] "PYHIN1 MUTATION ANALYSIS"
[1] 3
  PYHIN1 MUTATED PYHIN1 WILD-TYPE 
              14              564 
  PYHIN1 MUTATED PYHIN1 WILD-TYPE 
              14              564 
[1] "KIAA1462 MUTATION ANALYSIS"
[1] 3
  KIAA1462 MUTATED KIAA1462 WILD-TYPE 
                26                552 
  KIAA1462 MUTATED KIAA1462 WILD-TYPE 
                26                552 
[1] "MGST2 MUTATION ANALYSIS"
[1] 3
  MGST2 MUTATED MGST2 WILD-TYPE 
              3             575 
  MGST2 MUTATED MGST2 WILD-TYPE 
              3             575 
[1] "ZNF285 MUTATION ANALYSIS"
[1] 3
  ZNF285 MUTATED ZNF285 WILD-TYPE 
              14              564 
  ZNF285 MUTATED ZNF285 WILD-TYPE 
              14              564 
[1] "OPLAH MUTATION ANALYSIS"
[1] 3
  OPLAH MUTATED OPLAH WILD-TYPE 
             26             552 
  OPLAH MUTATED OPLAH WILD-TYPE 
             26             552 
[1] "NRK MUTATION ANALYSIS"
[1] 3
  NRK MUTATED NRK WILD-TYPE 
           31           547 
  NRK MUTATED NRK WILD-TYPE 
           31           547 
[1] "AP3M2 MUTATION ANALYSIS"
[1] 3
  AP3M2 MUTATED AP3M2 WILD-TYPE 
             13             565 
  AP3M2 MUTATED AP3M2 WILD-TYPE 
             13             565 
[1] "CD93 MUTATION ANALYSIS"
[1] 3
  CD93 MUTATED CD93 WILD-TYPE 
            24            554 
  CD93 MUTATED CD93 WILD-TYPE 
            24            554 
[1] "ZBTB38 MUTATION ANALYSIS"
[1] 3
  ZBTB38 MUTATED ZBTB38 WILD-TYPE 
              22              556 
  ZBTB38 MUTATED ZBTB38 WILD-TYPE 
              22              556 
[1] "PRAMEF14 MUTATION ANALYSIS"
[1] 3
  PRAMEF14 MUTATED PRAMEF14 WILD-TYPE 
                 6                572 
  PRAMEF14 MUTATED PRAMEF14 WILD-TYPE 
                 6                572 
[1] "ANKRD28 MUTATION ANALYSIS"
[1] 3
  ANKRD28 MUTATED ANKRD28 WILD-TYPE 
               17               561 
  ANKRD28 MUTATED ANKRD28 WILD-TYPE 
               17               561 
[1] "MKRN3 MUTATION ANALYSIS"
[1] 3
  MKRN3 MUTATED MKRN3 WILD-TYPE 
             24             554 
  MKRN3 MUTATED MKRN3 WILD-TYPE 
             24             554 
[1] "MAN1C1 MUTATION ANALYSIS"
[1] 3
  MAN1C1 MUTATED MAN1C1 WILD-TYPE 
              11              567 
  MAN1C1 MUTATED MAN1C1 WILD-TYPE 
              11              567 
[1] "STK11 MUTATION ANALYSIS"
[1] 3
  STK11 MUTATED STK11 WILD-TYPE 
             11             567 
  STK11 MUTATED STK11 WILD-TYPE 
             11             567 
[1] "VPS13A MUTATION ANALYSIS"
[1] 3
  VPS13A MUTATED VPS13A WILD-TYPE 
              42              536 
  VPS13A MUTATED VPS13A WILD-TYPE 
              42              536 
[1] "BEND5 MUTATION ANALYSIS"
[1] 3
  BEND5 MUTATED BEND5 WILD-TYPE 
              9             569 
  BEND5 MUTATED BEND5 WILD-TYPE 
              9             569 
[1] "TPTE2 MUTATION ANALYSIS"
[1] 3
  TPTE2 MUTATED TPTE2 WILD-TYPE 
             22             556 
  TPTE2 MUTATED TPTE2 WILD-TYPE 
             22             556 
[1] "NFE2L1 MUTATION ANALYSIS"
[1] 3
  NFE2L1 MUTATED NFE2L1 WILD-TYPE 
              15              563 
  NFE2L1 MUTATED NFE2L1 WILD-TYPE 
              15              563 
[1] "ITGAV MUTATION ANALYSIS"
[1] 3
  ITGAV MUTATED ITGAV WILD-TYPE 
             23             555 
  ITGAV MUTATED ITGAV WILD-TYPE 
             23             555 
[1] "BRCA2 MUTATION ANALYSIS"
[1] 3
  BRCA2 MUTATED BRCA2 WILD-TYPE 
             42             536 
  BRCA2 MUTATED BRCA2 WILD-TYPE 
             42             536 
[1] "CWF19L2 MUTATION ANALYSIS"
[1] 3
  CWF19L2 MUTATED CWF19L2 WILD-TYPE 
               20               558 
  CWF19L2 MUTATED CWF19L2 WILD-TYPE 
               20               558 
[1] "GBP3 MUTATION ANALYSIS"
[1] 3
  GBP3 MUTATED GBP3 WILD-TYPE 
             6            572 
  GBP3 MUTATED GBP3 WILD-TYPE 
             6            572 
[1] "FAM186B MUTATION ANALYSIS"
[1] 3
  FAM186B MUTATED FAM186B WILD-TYPE 
               13               565 
  FAM186B MUTATED FAM186B WILD-TYPE 
               13               565 
[1] "DOCK9 MUTATION ANALYSIS"
[1] 3
  DOCK9 MUTATED DOCK9 WILD-TYPE 
             22             556 
  DOCK9 MUTATED DOCK9 WILD-TYPE 
             22             556 
[1] "TMPRSS5 MUTATION ANALYSIS"
[1] 3
  TMPRSS5 MUTATED TMPRSS5 WILD-TYPE 
                4               574 
  TMPRSS5 MUTATED TMPRSS5 WILD-TYPE 
                4               574 
[1] "FAM104A MUTATION ANALYSIS"
[1] 3
  FAM104A MUTATED FAM104A WILD-TYPE 
                5               573 
  FAM104A MUTATED FAM104A WILD-TYPE 
                5               573 
[1] "EFHD1 MUTATION ANALYSIS"
[1] 3
  EFHD1 MUTATED EFHD1 WILD-TYPE 
              7             571 
  EFHD1 MUTATED EFHD1 WILD-TYPE 
              7             571 
[1] "CD4 MUTATION ANALYSIS"
[1] 3
  CD4 MUTATED CD4 WILD-TYPE 
           11           567 
  CD4 MUTATED CD4 WILD-TYPE 
           11           567 
[1] "OR6C65 MUTATION ANALYSIS"
[1] 3
  OR6C65 MUTATED OR6C65 WILD-TYPE 
               5              573 
  OR6C65 MUTATED OR6C65 WILD-TYPE 
               5              573 
[1] "SPATA2L MUTATION ANALYSIS"
[1] 3
  SPATA2L MUTATED SPATA2L WILD-TYPE 
                8               570 
  SPATA2L MUTATED SPATA2L WILD-TYPE 
                8               570 
[1] "GPR115 MUTATION ANALYSIS"
[1] 3
  GPR115 MUTATED GPR115 WILD-TYPE 
               6              572 
  GPR115 MUTATED GPR115 WILD-TYPE 
               6              572 
[1] "TRPM6 MUTATION ANALYSIS"
[1] 3
  TRPM6 MUTATED TRPM6 WILD-TYPE 
             29             549 
  TRPM6 MUTATED TRPM6 WILD-TYPE 
             29             549 
[1] "MKL1 MUTATION ANALYSIS"
[1] 3
  MKL1 MUTATED MKL1 WILD-TYPE 
            17            561 
  MKL1 MUTATED MKL1 WILD-TYPE 
            17            561 
[1] "ZNF185 MUTATION ANALYSIS"
[1] 3
  ZNF185 MUTATED ZNF185 WILD-TYPE 
              15              563 
  ZNF185 MUTATED ZNF185 WILD-TYPE 
              15              563 
[1] "SOAT1 MUTATION ANALYSIS"
[1] 3
  SOAT1 MUTATED SOAT1 WILD-TYPE 
             11             567 
  SOAT1 MUTATED SOAT1 WILD-TYPE 
             11             567 
[1] "TNKS1BP1 MUTATION ANALYSIS"
[1] 3
  TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE 
                30                548 
  TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE 
                30                548 
[1] "NOB1 MUTATION ANALYSIS"
[1] 3
  NOB1 MUTATED NOB1 WILD-TYPE 
             8            570 
  NOB1 MUTATED NOB1 WILD-TYPE 
             8            570 
[1] "DENND4C MUTATION ANALYSIS"
[1] 3
  DENND4C MUTATED DENND4C WILD-TYPE 
               20               558 
  DENND4C MUTATED DENND4C WILD-TYPE 
               20               558 
[1] "EFNA4 MUTATION ANALYSIS"
[1] 3
  EFNA4 MUTATED EFNA4 WILD-TYPE 
              6             572 
  EFNA4 MUTATED EFNA4 WILD-TYPE 
              6             572 
[1] "TAF7L MUTATION ANALYSIS"
[1] 3
  TAF7L MUTATED TAF7L WILD-TYPE 
             11             567 
  TAF7L MUTATED TAF7L WILD-TYPE 
             11             567 
[1] "SLC25A17 MUTATION ANALYSIS"
[1] 3
  SLC25A17 MUTATED SLC25A17 WILD-TYPE 
                 4                574 
  SLC25A17 MUTATED SLC25A17 WILD-TYPE 
                 4                574 
[1] "C9ORF41 MUTATION ANALYSIS"
[1] 3
  C9ORF41 MUTATED C9ORF41 WILD-TYPE 
                7               571 
  C9ORF41 MUTATED C9ORF41 WILD-TYPE 
                7               571 
[1] "EPB41 MUTATION ANALYSIS"
[1] 3
  EPB41 MUTATED EPB41 WILD-TYPE 
             14             564 
  EPB41 MUTATED EPB41 WILD-TYPE 
             14             564 
[1] "DENND2A MUTATION ANALYSIS"
[1] 3
  DENND2A MUTATED DENND2A WILD-TYPE 
               21               557 
  DENND2A MUTATED DENND2A WILD-TYPE 
               21               557 
[1] "SLC45A4 MUTATION ANALYSIS"
[1] 3
  SLC45A4 MUTATED SLC45A4 WILD-TYPE 
               24               554 
  SLC45A4 MUTATED SLC45A4 WILD-TYPE 
               24               554 
[1] "ALDH3A1 MUTATION ANALYSIS"
[1] 3
  ALDH3A1 MUTATED ALDH3A1 WILD-TYPE 
               14               564 
  ALDH3A1 MUTATED ALDH3A1 WILD-TYPE 
               14               564 
[1] "PAXIP1 MUTATION ANALYSIS"
[1] 3
  PAXIP1 MUTATED PAXIP1 WILD-TYPE 
              17              561 
  PAXIP1 MUTATED PAXIP1 WILD-TYPE 
              17              561 
[1] "PCCA MUTATION ANALYSIS"
[1] 3
  PCCA MUTATED PCCA WILD-TYPE 
            15            563 
  PCCA MUTATED PCCA WILD-TYPE 
            15            563 
[1] "WDR11 MUTATION ANALYSIS"
[1] 3
  WDR11 MUTATED WDR11 WILD-TYPE 
             12             566 
  WDR11 MUTATED WDR11 WILD-TYPE 
             12             566 
[1] "PSMC3 MUTATION ANALYSIS"
[1] 3
  PSMC3 MUTATED PSMC3 WILD-TYPE 
             10             568 
  PSMC3 MUTATED PSMC3 WILD-TYPE 
             10             568 
[1] "STEAP2 MUTATION ANALYSIS"
[1] 3
  STEAP2 MUTATED STEAP2 WILD-TYPE 
               7              571 
  STEAP2 MUTATED STEAP2 WILD-TYPE 
               7              571 
[1] "CUL1 MUTATION ANALYSIS"
[1] 3
  CUL1 MUTATED CUL1 WILD-TYPE 
            24            554 
  CUL1 MUTATED CUL1 WILD-TYPE 
            24            554 
[1] "TH1L MUTATION ANALYSIS"
[1] 3
  TH1L MUTATED TH1L WILD-TYPE 
            14            564 
  TH1L MUTATED TH1L WILD-TYPE 
            14            564 
[1] "FARSA MUTATION ANALYSIS"
[1] 3
  FARSA MUTATED FARSA WILD-TYPE 
              8             570 
  FARSA MUTATED FARSA WILD-TYPE 
              8             570 
[1] "EDNRB MUTATION ANALYSIS"
[1] 3
  EDNRB MUTATED EDNRB WILD-TYPE 
             31             547 
  EDNRB MUTATED EDNRB WILD-TYPE 
             31             547 
[1] "SMAD7 MUTATION ANALYSIS"
[1] 3
  SMAD7 MUTATED SMAD7 WILD-TYPE 
              7             571 
  SMAD7 MUTATED SMAD7 WILD-TYPE 
              7             571 
[1] "PABPC4 MUTATION ANALYSIS"
[1] 3
  PABPC4 MUTATED PABPC4 WILD-TYPE 
              11              567 
  PABPC4 MUTATED PABPC4 WILD-TYPE 
              11              567 
[1] "SLC16A1 MUTATION ANALYSIS"
[1] 3
  SLC16A1 MUTATED SLC16A1 WILD-TYPE 
               10               568 
  SLC16A1 MUTATED SLC16A1 WILD-TYPE 
               10               568 
[1] "KIAA1539 MUTATION ANALYSIS"
[1] 3
  KIAA1539 MUTATED KIAA1539 WILD-TYPE 
                14                564 
  KIAA1539 MUTATED KIAA1539 WILD-TYPE 
                14                564 
[1] "DNAJB13 MUTATION ANALYSIS"
[1] 3
  DNAJB13 MUTATED DNAJB13 WILD-TYPE 
                6               572 
  DNAJB13 MUTATED DNAJB13 WILD-TYPE 
                6               572 
[1] "ZCCHC11 MUTATION ANALYSIS"
[1] 3
  ZCCHC11 MUTATED ZCCHC11 WILD-TYPE 
               24               554 
  ZCCHC11 MUTATED ZCCHC11 WILD-TYPE 
               24               554 
[1] "DDX60 MUTATION ANALYSIS"
[1] 3
  DDX60 MUTATED DDX60 WILD-TYPE 
             23             555 
  DDX60 MUTATED DDX60 WILD-TYPE 
             23             555 
[1] "SCN10A MUTATION ANALYSIS"
[1] 3
  SCN10A MUTATED SCN10A WILD-TYPE 
              47              531 
  SCN10A MUTATED SCN10A WILD-TYPE 
              47              531 
[1] "BRDT MUTATION ANALYSIS"
[1] 3
  BRDT MUTATED BRDT WILD-TYPE 
            14            564 
  BRDT MUTATED BRDT WILD-TYPE 
            14            564 
[1] "CCAR1 MUTATION ANALYSIS"
[1] 3
  CCAR1 MUTATED CCAR1 WILD-TYPE 
             22             556 
  CCAR1 MUTATED CCAR1 WILD-TYPE 
             22             556 
[1] "MCCC2 MUTATION ANALYSIS"
[1] 3
  MCCC2 MUTATED MCCC2 WILD-TYPE 
              9             569 
  MCCC2 MUTATED MCCC2 WILD-TYPE 
              9             569 
[1] "AKAP13 MUTATION ANALYSIS"
[1] 3
  AKAP13 MUTATED AKAP13 WILD-TYPE 
              44              534 
  AKAP13 MUTATED AKAP13 WILD-TYPE 
              44              534 
[1] "CEP250 MUTATION ANALYSIS"
[1] 3
  CEP250 MUTATED CEP250 WILD-TYPE 
              28              550 
  CEP250 MUTATED CEP250 WILD-TYPE 
              28              550 
[1] "AGAP5 MUTATION ANALYSIS"
[1] 3
  AGAP5 MUTATED AGAP5 WILD-TYPE 
              8             570 
  AGAP5 MUTATED AGAP5 WILD-TYPE 
              8             570 
[1] "SCLY MUTATION ANALYSIS"
[1] 3
  SCLY MUTATED SCLY WILD-TYPE 
             6            572 
  SCLY MUTATED SCLY WILD-TYPE 
             6            572 
[1] "KRT23 MUTATION ANALYSIS"
[1] 3
  KRT23 MUTATED KRT23 WILD-TYPE 
             17             561 
  KRT23 MUTATED KRT23 WILD-TYPE 
             17             561 
[1] "KIRREL2 MUTATION ANALYSIS"
[1] 3
  KIRREL2 MUTATED KIRREL2 WILD-TYPE 
               17               561 
  KIRREL2 MUTATED KIRREL2 WILD-TYPE 
               17               561 
[1] "GTF3C3 MUTATION ANALYSIS"
[1] 3
  GTF3C3 MUTATED GTF3C3 WILD-TYPE 
              20              558 
  GTF3C3 MUTATED GTF3C3 WILD-TYPE 
              20              558 
[1] "CCDC27 MUTATION ANALYSIS"
[1] 3
  CCDC27 MUTATED CCDC27 WILD-TYPE 
              12              566 
  CCDC27 MUTATED CCDC27 WILD-TYPE 
              12              566 
[1] "SH3BP2 MUTATION ANALYSIS"
[1] 3
  SH3BP2 MUTATED SH3BP2 WILD-TYPE 
               7              571 
  SH3BP2 MUTATED SH3BP2 WILD-TYPE 
               7              571 
[1] "TIGD7 MUTATION ANALYSIS"
[1] 3
  TIGD7 MUTATED TIGD7 WILD-TYPE 
             12             566 
  TIGD7 MUTATED TIGD7 WILD-TYPE 
             12             566 
[1] "B4GALNT4 MUTATION ANALYSIS"
[1] 3
  B4GALNT4 MUTATED B4GALNT4 WILD-TYPE 
                19                559 
  B4GALNT4 MUTATED B4GALNT4 WILD-TYPE 
                19                559 
[1] "ARHGEF11 MUTATION ANALYSIS"
[1] 3
  ARHGEF11 MUTATED ARHGEF11 WILD-TYPE 
                22                556 
  ARHGEF11 MUTATED ARHGEF11 WILD-TYPE 
                22                556 
[1] "SHMT2 MUTATION ANALYSIS"
[1] 3
  SHMT2 MUTATED SHMT2 WILD-TYPE 
             12             566 
  SHMT2 MUTATED SHMT2 WILD-TYPE 
             12             566 
[1] "USP30 MUTATION ANALYSIS"
[1] 3
  USP30 MUTATED USP30 WILD-TYPE 
             10             568 
  USP30 MUTATED USP30 WILD-TYPE 
             10             568 
[1] "ASPN MUTATION ANALYSIS"
[1] 3
  ASPN MUTATED ASPN WILD-TYPE 
             7            571 
  ASPN MUTATED ASPN WILD-TYPE 
             7            571 
[1] "LZTR1 MUTATION ANALYSIS"
[1] 3
  LZTR1 MUTATED LZTR1 WILD-TYPE 
             24             554 
  LZTR1 MUTATED LZTR1 WILD-TYPE 
             24             554 
[1] "CNOT6 MUTATION ANALYSIS"
[1] 3
  CNOT6 MUTATED CNOT6 WILD-TYPE 
             10             568 
  CNOT6 MUTATED CNOT6 WILD-TYPE 
             10             568 
[1] "KIFAP3 MUTATION ANALYSIS"
[1] 3
  KIFAP3 MUTATED KIFAP3 WILD-TYPE 
              15              563 
  KIFAP3 MUTATED KIFAP3 WILD-TYPE 
              15              563 
[1] "MFN1 MUTATION ANALYSIS"
[1] 3
  MFN1 MUTATED MFN1 WILD-TYPE 
            12            566 
  MFN1 MUTATED MFN1 WILD-TYPE 
            12            566 
[1] "MZF1 MUTATION ANALYSIS"
[1] 3
  MZF1 MUTATED MZF1 WILD-TYPE 
            15            563 
  MZF1 MUTATED MZF1 WILD-TYPE 
            15            563 
[1] "SCAMP2 MUTATION ANALYSIS"
[1] 3
  SCAMP2 MUTATED SCAMP2 WILD-TYPE 
               8              570 
  SCAMP2 MUTATED SCAMP2 WILD-TYPE 
               8              570 
[1] "LCE1A MUTATION ANALYSIS"
[1] 3
  LCE1A MUTATED LCE1A WILD-TYPE 
              4             574 
  LCE1A MUTATED LCE1A WILD-TYPE 
              4             574 
[1] "TMEM55A MUTATION ANALYSIS"
[1] 3
  TMEM55A MUTATED TMEM55A WILD-TYPE 
                5               573 
  TMEM55A MUTATED TMEM55A WILD-TYPE 
                5               573 
[1] "PNPLA7 MUTATION ANALYSIS"
[1] 3
  PNPLA7 MUTATED PNPLA7 WILD-TYPE 
              26              552 
  PNPLA7 MUTATED PNPLA7 WILD-TYPE 
              26              552 
[1] "STAT6 MUTATION ANALYSIS"
[1] 3
  STAT6 MUTATED STAT6 WILD-TYPE 
              9             569 
  STAT6 MUTATED STAT6 WILD-TYPE 
              9             569 
[1] "STK33 MUTATION ANALYSIS"
[1] 3
  STK33 MUTATED STK33 WILD-TYPE 
             13             565 
  STK33 MUTATED STK33 WILD-TYPE 
             13             565 
[1] "DNAJA1 MUTATION ANALYSIS"
[1] 3
  DNAJA1 MUTATED DNAJA1 WILD-TYPE 
              12              566 
  DNAJA1 MUTATED DNAJA1 WILD-TYPE 
              12              566 
[1] "IFITM1 MUTATION ANALYSIS"
[1] 3
  IFITM1 MUTATED IFITM1 WILD-TYPE 
               5              573 
  IFITM1 MUTATED IFITM1 WILD-TYPE 
               5              573 
[1] "FAM151A MUTATION ANALYSIS"
[1] 3
  FAM151A MUTATED FAM151A WILD-TYPE 
                8               570 
  FAM151A MUTATED FAM151A WILD-TYPE 
                8               570 
[1] "HMGCLL1 MUTATION ANALYSIS"
[1] 3
  HMGCLL1 MUTATED HMGCLL1 WILD-TYPE 
               10               568 
  HMGCLL1 MUTATED HMGCLL1 WILD-TYPE 
               10               568 
[1] "GIPC3 MUTATION ANALYSIS"
[1] 3
  GIPC3 MUTATED GIPC3 WILD-TYPE 
              9             569 
  GIPC3 MUTATED GIPC3 WILD-TYPE 
              9             569 
[1] "EFHA2 MUTATION ANALYSIS"
[1] 3
  EFHA2 MUTATED EFHA2 WILD-TYPE 
             15             563 
  EFHA2 MUTATED EFHA2 WILD-TYPE 
             15             563 
[1] "PSD3 MUTATION ANALYSIS"
[1] 3
  PSD3 MUTATED PSD3 WILD-TYPE 
            20            558 
  PSD3 MUTATED PSD3 WILD-TYPE 
            20            558 
[1] "HSPB8 MUTATION ANALYSIS"
[1] 3
  HSPB8 MUTATED HSPB8 WILD-TYPE 
              6             572 
  HSPB8 MUTATED HSPB8 WILD-TYPE 
              6             572 
[1] "CASKIN2 MUTATION ANALYSIS"
[1] 3
  CASKIN2 MUTATED CASKIN2 WILD-TYPE 
               16               562 
  CASKIN2 MUTATED CASKIN2 WILD-TYPE 
               16               562 
[1] "IFI27L2 MUTATION ANALYSIS"
[1] 3
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                3               575 
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                3               575 
[1] "PKN3 MUTATION ANALYSIS"
[1] 3
  PKN3 MUTATED PKN3 WILD-TYPE 
            17            561 
  PKN3 MUTATED PKN3 WILD-TYPE 
            17            561 
[1] "GPR160 MUTATION ANALYSIS"
[1] 3
  GPR160 MUTATED GPR160 WILD-TYPE 
               8              570 
  GPR160 MUTATED GPR160 WILD-TYPE 
               8              570 
[1] "OTUD7B MUTATION ANALYSIS"
[1] 3
  OTUD7B MUTATED OTUD7B WILD-TYPE 
              17              561 
  OTUD7B MUTATED OTUD7B WILD-TYPE 
              17              561 
[1] "ICAM4 MUTATION ANALYSIS"
[1] 3
  ICAM4 MUTATED ICAM4 WILD-TYPE 
              8             570 
  ICAM4 MUTATED ICAM4 WILD-TYPE 
              8             570 
[1] "ZNF174 MUTATION ANALYSIS"
[1] 3
  ZNF174 MUTATED ZNF174 WILD-TYPE 
               8              570 
  ZNF174 MUTATED ZNF174 WILD-TYPE 
               8              570 
[1] "POMGNT1 MUTATION ANALYSIS"
[1] 3
  POMGNT1 MUTATED POMGNT1 WILD-TYPE 
               12               566 
  POMGNT1 MUTATED POMGNT1 WILD-TYPE 
               12               566 
[1] "MEN1 MUTATION ANALYSIS"
[1] 3
  MEN1 MUTATED MEN1 WILD-TYPE 
            10            568 
  MEN1 MUTATED MEN1 WILD-TYPE 
            10            568 
[1] "MIA3 MUTATION ANALYSIS"
[1] 3
  MIA3 MUTATED MIA3 WILD-TYPE 
            29            549 
  MIA3 MUTATED MIA3 WILD-TYPE 
            29            549 
[1] "SRP72 MUTATION ANALYSIS"
[1] 3
  SRP72 MUTATED SRP72 WILD-TYPE 
             16             562 
  SRP72 MUTATED SRP72 WILD-TYPE 
             16             562 
[1] "UVRAG MUTATION ANALYSIS"
[1] 3
  UVRAG MUTATED UVRAG WILD-TYPE 
             13             565 
  UVRAG MUTATED UVRAG WILD-TYPE 
             13             565 
[1] "PLXNB2 MUTATION ANALYSIS"
[1] 3
  PLXNB2 MUTATED PLXNB2 WILD-TYPE 
              31              547 
  PLXNB2 MUTATED PLXNB2 WILD-TYPE 
              31              547 
[1] "KIF2B MUTATION ANALYSIS"
[1] 3
  KIF2B MUTATED KIF2B WILD-TYPE 
             35             543 
  KIF2B MUTATED KIF2B WILD-TYPE 
             35             543 
[1] "HNF1B MUTATION ANALYSIS"
[1] 3
  HNF1B MUTATED HNF1B WILD-TYPE 
              5             573 
  HNF1B MUTATED HNF1B WILD-TYPE 
              5             573 
[1] "CEP290 MUTATION ANALYSIS"
[1] 3
  CEP290 MUTATED CEP290 WILD-TYPE 
              23              555 
  CEP290 MUTATED CEP290 WILD-TYPE 
              23              555 
[1] "COL20A1 MUTATION ANALYSIS"
[1] 3
  COL20A1 MUTATED COL20A1 WILD-TYPE 
               22               556 
  COL20A1 MUTATED COL20A1 WILD-TYPE 
               22               556 
[1] "THSD1 MUTATION ANALYSIS"
[1] 3
  THSD1 MUTATED THSD1 WILD-TYPE 
             26             552 
  THSD1 MUTATED THSD1 WILD-TYPE 
             26             552 
[1] "TADA2B MUTATION ANALYSIS"
[1] 3
  TADA2B MUTATED TADA2B WILD-TYPE 
              15              563 
  TADA2B MUTATED TADA2B WILD-TYPE 
              15              563 
[1] "HSP90AA1 MUTATION ANALYSIS"
[1] 3
  HSP90AA1 MUTATED HSP90AA1 WILD-TYPE 
                14                564 
  HSP90AA1 MUTATED HSP90AA1 WILD-TYPE 
                14                564 
[1] "CRAT MUTATION ANALYSIS"
[1] 3
  CRAT MUTATED CRAT WILD-TYPE 
            14            564 
  CRAT MUTATED CRAT WILD-TYPE 
            14            564 
[1] "MON2 MUTATION ANALYSIS"
[1] 3
  MON2 MUTATED MON2 WILD-TYPE 
            21            557 
  MON2 MUTATED MON2 WILD-TYPE 
            21            557 
[1] "ZKSCAN1 MUTATION ANALYSIS"
[1] 3
  ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE 
               12               566 
  ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE 
               12               566 
[1] "HAUS6 MUTATION ANALYSIS"
[1] 3
  HAUS6 MUTATED HAUS6 WILD-TYPE 
             14             564 
  HAUS6 MUTATED HAUS6 WILD-TYPE 
             14             564 
[1] "CHRNA4 MUTATION ANALYSIS"
[1] 3
  CHRNA4 MUTATED CHRNA4 WILD-TYPE 
              18              560 
  CHRNA4 MUTATED CHRNA4 WILD-TYPE 
              18              560 
[1] "FBXO43 MUTATION ANALYSIS"
[1] 3
  FBXO43 MUTATED FBXO43 WILD-TYPE 
              14              564 
  FBXO43 MUTATED FBXO43 WILD-TYPE 
              14              564 
[1] "PIK3R1 MUTATION ANALYSIS"
[1] 3
  PIK3R1 MUTATED PIK3R1 WILD-TYPE 
              16              562 
  PIK3R1 MUTATED PIK3R1 WILD-TYPE 
              16              562 
[1] "ZMYND19 MUTATION ANALYSIS"
[1] 3
  ZMYND19 MUTATED ZMYND19 WILD-TYPE 
               10               568 
  ZMYND19 MUTATED ZMYND19 WILD-TYPE 
               10               568 
[1] "DYRK1A MUTATION ANALYSIS"
[1] 3
  DYRK1A MUTATED DYRK1A WILD-TYPE 
              17              561 
  DYRK1A MUTATED DYRK1A WILD-TYPE 
              17              561 
[1] "KIF6 MUTATION ANALYSIS"
[1] 3
  KIF6 MUTATED KIF6 WILD-TYPE 
            18            560 
  KIF6 MUTATED KIF6 WILD-TYPE 
            18            560 
[1] "XPO1 MUTATION ANALYSIS"
[1] 3
  XPO1 MUTATED XPO1 WILD-TYPE 
            14            564 
  XPO1 MUTATED XPO1 WILD-TYPE 
            14            564 
[1] "WHSC1L1 MUTATION ANALYSIS"
[1] 3
  WHSC1L1 MUTATED WHSC1L1 WILD-TYPE 
               23               555 
  WHSC1L1 MUTATED WHSC1L1 WILD-TYPE 
               23               555 
[1] "NAA25 MUTATION ANALYSIS"
[1] 3
  NAA25 MUTATED NAA25 WILD-TYPE 
             20             558 
  NAA25 MUTATED NAA25 WILD-TYPE 
             20             558 
[1] "MANEA MUTATION ANALYSIS"
[1] 3
  MANEA MUTATED MANEA WILD-TYPE 
             15             563 
  MANEA MUTATED MANEA WILD-TYPE 
             15             563 
[1] "CCR3 MUTATION ANALYSIS"
[1] 3
  CCR3 MUTATED CCR3 WILD-TYPE 
            13            565 
  CCR3 MUTATED CCR3 WILD-TYPE 
            13            565 
[1] "HAX1 MUTATION ANALYSIS"
[1] 3
  HAX1 MUTATED HAX1 WILD-TYPE 
             7            571 
  HAX1 MUTATED HAX1 WILD-TYPE 
             7            571 
[1] "TAF1D MUTATION ANALYSIS"
[1] 3
  TAF1D MUTATED TAF1D WILD-TYPE 
              8             570 
  TAF1D MUTATED TAF1D WILD-TYPE 
              8             570 
[1] "KLRF1 MUTATION ANALYSIS"
[1] 3
  KLRF1 MUTATED KLRF1 WILD-TYPE 
              6             572 
  KLRF1 MUTATED KLRF1 WILD-TYPE 
              6             572 
[1] "SPOCD1 MUTATION ANALYSIS"
[1] 3
  SPOCD1 MUTATED SPOCD1 WILD-TYPE 
              17              561 
  SPOCD1 MUTATED SPOCD1 WILD-TYPE 
              17              561 
[1] "DAPK1 MUTATION ANALYSIS"
[1] 3
  DAPK1 MUTATED DAPK1 WILD-TYPE 
             30             548 
  DAPK1 MUTATED DAPK1 WILD-TYPE 
             30             548 
[1] "SERPING1 MUTATION ANALYSIS"
[1] 3
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                10                568 
  SERPING1 MUTATED SERPING1 WILD-TYPE 
                10                568 
[1] "TMEM165 MUTATION ANALYSIS"
[1] 3
  TMEM165 MUTATED TMEM165 WILD-TYPE 
                5               573 
  TMEM165 MUTATED TMEM165 WILD-TYPE 
                5               573 
[1] "SDC4 MUTATION ANALYSIS"
[1] 3
  SDC4 MUTATED SDC4 WILD-TYPE 
             6            572 
  SDC4 MUTATED SDC4 WILD-TYPE 
             6            572 
[1] "TAF1B MUTATION ANALYSIS"
[1] 3
  TAF1B MUTATED TAF1B WILD-TYPE 
             15             563 
  TAF1B MUTATED TAF1B WILD-TYPE 
             15             563 
[1] "ITGAE MUTATION ANALYSIS"
[1] 3
  ITGAE MUTATED ITGAE WILD-TYPE 
             18             560 
  ITGAE MUTATED ITGAE WILD-TYPE 
             18             560 
[1] "BIN3 MUTATION ANALYSIS"
[1] 3
  BIN3 MUTATED BIN3 WILD-TYPE 
             5            573 
  BIN3 MUTATED BIN3 WILD-TYPE 
             5            573 
[1] "TRIOBP MUTATION ANALYSIS"
[1] 3
  TRIOBP MUTATED TRIOBP WILD-TYPE 
              38              540 
  TRIOBP MUTATED TRIOBP WILD-TYPE 
              38              540 
[1] "BRD1 MUTATION ANALYSIS"
[1] 3
  BRD1 MUTATED BRD1 WILD-TYPE 
            22            556 
  BRD1 MUTATED BRD1 WILD-TYPE 
            22            556 
[1] "ITPR2 MUTATION ANALYSIS"
[1] 3
  ITPR2 MUTATED ITPR2 WILD-TYPE 
             35             543 
  ITPR2 MUTATED ITPR2 WILD-TYPE 
             35             543 
[1] "DDO MUTATION ANALYSIS"
[1] 3
  DDO MUTATED DDO WILD-TYPE 
            7           571 
  DDO MUTATED DDO WILD-TYPE 
            7           571 
[1] "ZNF295 MUTATION ANALYSIS"
[1] 3
  ZNF295 MUTATED ZNF295 WILD-TYPE 
              19              559 
  ZNF295 MUTATED ZNF295 WILD-TYPE 
              19              559 
[1] "FOXQ1 MUTATION ANALYSIS"
[1] 3
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              3             575 
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              3             575 
[1] "HMMR MUTATION ANALYSIS"
[1] 3
  HMMR MUTATED HMMR WILD-TYPE 
            11            567 
  HMMR MUTATED HMMR WILD-TYPE 
            11            567 
[1] "KIAA1609 MUTATION ANALYSIS"
[1] 3
  KIAA1609 MUTATED KIAA1609 WILD-TYPE 
                 8                570 
  KIAA1609 MUTATED KIAA1609 WILD-TYPE 
                 8                570 
[1] "RAB14 MUTATION ANALYSIS"
[1] 3
  RAB14 MUTATED RAB14 WILD-TYPE 
              6             572 
  RAB14 MUTATED RAB14 WILD-TYPE 
              6             572 
[1] "AP2A2 MUTATION ANALYSIS"
[1] 3
  AP2A2 MUTATED AP2A2 WILD-TYPE 
             16             562 
  AP2A2 MUTATED AP2A2 WILD-TYPE 
             16             562 
[1] "KIAA0427 MUTATION ANALYSIS"
[1] 3
  KIAA0427 MUTATED KIAA0427 WILD-TYPE 
                17                561 
  KIAA0427 MUTATED KIAA0427 WILD-TYPE 
                17                561 
[1] "CACNA1A MUTATION ANALYSIS"
[1] 3
  CACNA1A MUTATED CACNA1A WILD-TYPE 
               39               539 
  CACNA1A MUTATED CACNA1A WILD-TYPE 
               39               539 
[1] "DCLRE1A MUTATION ANALYSIS"
[1] 3
  DCLRE1A MUTATED DCLRE1A WILD-TYPE 
               16               562 
  DCLRE1A MUTATED DCLRE1A WILD-TYPE 
               16               562 
[1] "ZNF570 MUTATION ANALYSIS"
[1] 3
  ZNF570 MUTATED ZNF570 WILD-TYPE 
              19              559 
  ZNF570 MUTATED ZNF570 WILD-TYPE 
              19              559 
[1] "HAPLN1 MUTATION ANALYSIS"
[1] 3
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
               9              569 
  HAPLN1 MUTATED HAPLN1 WILD-TYPE 
               9              569 
[1] "N4BP2 MUTATION ANALYSIS"
[1] 3
  N4BP2 MUTATED N4BP2 WILD-TYPE 
             20             558 
  N4BP2 MUTATED N4BP2 WILD-TYPE 
             20             558 
[1] "IPP MUTATION ANALYSIS"
[1] 3
  IPP MUTATED IPP WILD-TYPE 
            9           569 
  IPP MUTATED IPP WILD-TYPE 
            9           569 
[1] "CD6 MUTATION ANALYSIS"
[1] 3
  CD6 MUTATED CD6 WILD-TYPE 
           12           566 
  CD6 MUTATED CD6 WILD-TYPE 
           12           566 
[1] "ATP6V1H MUTATION ANALYSIS"
[1] 3
  ATP6V1H MUTATED ATP6V1H WILD-TYPE 
               16               562 
  ATP6V1H MUTATED ATP6V1H WILD-TYPE 
               16               562 
[1] "PAMR1 MUTATION ANALYSIS"
[1] 3
  PAMR1 MUTATED PAMR1 WILD-TYPE 
             19             559 
  PAMR1 MUTATED PAMR1 WILD-TYPE 
             19             559 
[1] "NLRC5 MUTATION ANALYSIS"
[1] 3
  NLRC5 MUTATED NLRC5 WILD-TYPE 
             29             549 
  NLRC5 MUTATED NLRC5 WILD-TYPE 
             29             549 
[1] "CST1 MUTATION ANALYSIS"
[1] 3
  CST1 MUTATED CST1 WILD-TYPE 
             8            570 
  CST1 MUTATED CST1 WILD-TYPE 
             8            570 
[1] "TMEM132D MUTATION ANALYSIS"
[1] 3
  TMEM132D MUTATED TMEM132D WILD-TYPE 
                44                534 
  TMEM132D MUTATED TMEM132D WILD-TYPE 
                44                534 
[1] "XRN1 MUTATION ANALYSIS"
[1] 3
  XRN1 MUTATED XRN1 WILD-TYPE 
            27            551 
  XRN1 MUTATED XRN1 WILD-TYPE 
            27            551 
[1] "OSBPL9 MUTATION ANALYSIS"
[1] 3
  OSBPL9 MUTATED OSBPL9 WILD-TYPE 
              12              566 
  OSBPL9 MUTATED OSBPL9 WILD-TYPE 
              12              566 
[1] "SYT4 MUTATION ANALYSIS"
[1] 3
  SYT4 MUTATED SYT4 WILD-TYPE 
            18            560 
  SYT4 MUTATED SYT4 WILD-TYPE 
            18            560 
[1] "PHF13 MUTATION ANALYSIS"
[1] 3
  PHF13 MUTATED PHF13 WILD-TYPE 
              7             571 
  PHF13 MUTATED PHF13 WILD-TYPE 
              7             571 
[1] "SMAP2 MUTATION ANALYSIS"
[1] 3
  SMAP2 MUTATED SMAP2 WILD-TYPE 
              5             573 
  SMAP2 MUTATED SMAP2 WILD-TYPE 
              5             573 
[1] "GLYATL2 MUTATION ANALYSIS"
[1] 3
  GLYATL2 MUTATED GLYATL2 WILD-TYPE 
               10               568 
  GLYATL2 MUTATED GLYATL2 WILD-TYPE 
               10               568 
[1] "C9ORF98 MUTATION ANALYSIS"
[1] 3
  C9ORF98 MUTATED C9ORF98 WILD-TYPE 
               12               566 
  C9ORF98 MUTATED C9ORF98 WILD-TYPE 
               12               566 
[1] "ZNF341 MUTATION ANALYSIS"
[1] 3
  ZNF341 MUTATED ZNF341 WILD-TYPE 
              20              558 
  ZNF341 MUTATED ZNF341 WILD-TYPE 
              20              558 
[1] "MRPL24 MUTATION ANALYSIS"
[1] 3
  MRPL24 MUTATED MRPL24 WILD-TYPE 
               6              572 
  MRPL24 MUTATED MRPL24 WILD-TYPE 
               6              572 
[1] "NRAS MUTATION ANALYSIS"
[1] 3
  NRAS MUTATED NRAS WILD-TYPE 
             5            573 
  NRAS MUTATED NRAS WILD-TYPE 
             5            573 
[1] "RSPH4A MUTATION ANALYSIS"
[1] 3
  RSPH4A MUTATED RSPH4A WILD-TYPE 
              10              568 
  RSPH4A MUTATED RSPH4A WILD-TYPE 
              10              568 
[1] "RING1 MUTATION ANALYSIS"
[1] 3
  RING1 MUTATED RING1 WILD-TYPE 
              9             569 
  RING1 MUTATED RING1 WILD-TYPE 
              9             569 
[1] "KCNH4 MUTATION ANALYSIS"
[1] 3
  KCNH4 MUTATED KCNH4 WILD-TYPE 
             15             563 
  KCNH4 MUTATED KCNH4 WILD-TYPE 
             15             563 
[1] "ZNF23 MUTATION ANALYSIS"
[1] 3
  ZNF23 MUTATED ZNF23 WILD-TYPE 
              5             573 
  ZNF23 MUTATED ZNF23 WILD-TYPE 
              5             573 
[1] "MYO3A MUTATION ANALYSIS"
[1] 3
  MYO3A MUTATED MYO3A WILD-TYPE 
             39             539 
  MYO3A MUTATED MYO3A WILD-TYPE 
             39             539 
[1] "C7ORF49 MUTATION ANALYSIS"
[1] 3
  C7ORF49 MUTATED C7ORF49 WILD-TYPE 
                8               570 
  C7ORF49 MUTATED C7ORF49 WILD-TYPE 
                8               570 
[1] "C1RL MUTATION ANALYSIS"
[1] 3
  C1RL MUTATED C1RL WILD-TYPE 
             8            570 
  C1RL MUTATED C1RL WILD-TYPE 
             8            570 
[1] "C9ORF25 MUTATION ANALYSIS"
[1] 3
  C9ORF25 MUTATED C9ORF25 WILD-TYPE 
                5               573 
  C9ORF25 MUTATED C9ORF25 WILD-TYPE 
                5               573 
[1] "LRFN3 MUTATION ANALYSIS"
[1] 3
  LRFN3 MUTATED LRFN3 WILD-TYPE 
             22             556 
  LRFN3 MUTATED LRFN3 WILD-TYPE 
             22             556 
[1] "ING1 MUTATION ANALYSIS"
[1] 3
  ING1 MUTATED ING1 WILD-TYPE 
             8            570 
  ING1 MUTATED ING1 WILD-TYPE 
             8            570 
[1] "FAM26E MUTATION ANALYSIS"
[1] 3
  FAM26E MUTATED FAM26E WILD-TYPE 
               3              575 
  FAM26E MUTATED FAM26E WILD-TYPE 
               3              575 
[1] "USP1 MUTATION ANALYSIS"
[1] 3
  USP1 MUTATED USP1 WILD-TYPE 
             7            571 
  USP1 MUTATED USP1 WILD-TYPE 
             7            571 
[1] "CRYBG3 MUTATION ANALYSIS"
[1] 3
  CRYBG3 MUTATED CRYBG3 WILD-TYPE 
              18              560 
  CRYBG3 MUTATED CRYBG3 WILD-TYPE 
              18              560 
[1] "HCFC1R1 MUTATION ANALYSIS"
[1] 3
  HCFC1R1 MUTATED HCFC1R1 WILD-TYPE 
                6               572 
  HCFC1R1 MUTATED HCFC1R1 WILD-TYPE 
                6               572 
[1] "ZNF142 MUTATION ANALYSIS"
[1] 3
  ZNF142 MUTATED ZNF142 WILD-TYPE 
              25              553 
  ZNF142 MUTATED ZNF142 WILD-TYPE 
              25              553 
[1] "POLE3 MUTATION ANALYSIS"
[1] 3
  POLE3 MUTATED POLE3 WILD-TYPE 
              3             575 
  POLE3 MUTATED POLE3 WILD-TYPE 
              3             575 
[1] "HGF MUTATION ANALYSIS"
[1] 3
  HGF MUTATED HGF WILD-TYPE 
           20           558 
  HGF MUTATED HGF WILD-TYPE 
           20           558 
[1] "PAM MUTATION ANALYSIS"
[1] 3
  PAM MUTATED PAM WILD-TYPE 
           10           568 
  PAM MUTATED PAM WILD-TYPE 
           10           568 
[1] "TMEM116 MUTATION ANALYSIS"
[1] 3
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                3               575 
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                3               575 
[1] "DNER MUTATION ANALYSIS"
[1] 3
  DNER MUTATED DNER WILD-TYPE 
            18            560 
  DNER MUTATED DNER WILD-TYPE 
            18            560 
[1] "TEX15 MUTATION ANALYSIS"
[1] 3
  TEX15 MUTATED TEX15 WILD-TYPE 
             34             544 
  TEX15 MUTATED TEX15 WILD-TYPE 
             34             544 
[1] "C1ORF63 MUTATION ANALYSIS"
[1] 3
  C1ORF63 MUTATED C1ORF63 WILD-TYPE 
                3               575 
  C1ORF63 MUTATED C1ORF63 WILD-TYPE 
                3               575 
[1] "FOLH1 MUTATION ANALYSIS"
[1] 3
  FOLH1 MUTATED FOLH1 WILD-TYPE 
             24             554 
  FOLH1 MUTATED FOLH1 WILD-TYPE 
             24             554 
[1] "MOCS2 MUTATION ANALYSIS"
[1] 3
  MOCS2 MUTATED MOCS2 WILD-TYPE 
              8             570 
  MOCS2 MUTATED MOCS2 WILD-TYPE 
              8             570 
[1] "MICALL1 MUTATION ANALYSIS"
[1] 3
  MICALL1 MUTATED MICALL1 WILD-TYPE 
               10               568 
  MICALL1 MUTATED MICALL1 WILD-TYPE 
               10               568 
[1] "CLCA4 MUTATION ANALYSIS"
[1] 3
  CLCA4 MUTATED CLCA4 WILD-TYPE 
             19             559 
  CLCA4 MUTATED CLCA4 WILD-TYPE 
             19             559 
[1] "SMO MUTATION ANALYSIS"
[1] 3
  SMO MUTATED SMO WILD-TYPE 
           18           560 
  SMO MUTATED SMO WILD-TYPE 
           18           560 
[1] "MSL1 MUTATION ANALYSIS"
[1] 3
  MSL1 MUTATED MSL1 WILD-TYPE 
             7            571 
  MSL1 MUTATED MSL1 WILD-TYPE 
             7            571 
[1] "IRS4 MUTATION ANALYSIS"
[1] 3
  IRS4 MUTATED IRS4 WILD-TYPE 
            28            550 
  IRS4 MUTATED IRS4 WILD-TYPE 
            28            550 
[1] "AARS2 MUTATION ANALYSIS"
[1] 3
  AARS2 MUTATED AARS2 WILD-TYPE 
             21             557 
  AARS2 MUTATED AARS2 WILD-TYPE 
             21             557 
[1] "DDHD1 MUTATION ANALYSIS"
[1] 3
  DDHD1 MUTATED DDHD1 WILD-TYPE 
             17             561 
  DDHD1 MUTATED DDHD1 WILD-TYPE 
             17             561 
[1] "PSD MUTATION ANALYSIS"
[1] 3
  PSD MUTATED PSD WILD-TYPE 
           19           559 
  PSD MUTATED PSD WILD-TYPE 
           19           559 
[1] "NOP2 MUTATION ANALYSIS"
[1] 3
  NOP2 MUTATED NOP2 WILD-TYPE 
             9            569 
  NOP2 MUTATED NOP2 WILD-TYPE 
             9            569 
[1] "GPR45 MUTATION ANALYSIS"
[1] 3
  GPR45 MUTATED GPR45 WILD-TYPE 
             17             561 
  GPR45 MUTATED GPR45 WILD-TYPE 
             17             561 
[1] "IFI44 MUTATION ANALYSIS"
[1] 3
  IFI44 MUTATED IFI44 WILD-TYPE 
              6             572 
  IFI44 MUTATED IFI44 WILD-TYPE 
              6             572 
[1] "BEST3 MUTATION ANALYSIS"
[1] 3
  BEST3 MUTATED BEST3 WILD-TYPE 
             14             564 
  BEST3 MUTATED BEST3 WILD-TYPE 
             14             564 
[1] "FLNB MUTATION ANALYSIS"
[1] 3
  FLNB MUTATED FLNB WILD-TYPE 
            32            546 
  FLNB MUTATED FLNB WILD-TYPE 
            32            546 
[1] "KCTD9 MUTATION ANALYSIS"
[1] 3
  KCTD9 MUTATED KCTD9 WILD-TYPE 
             11             567 
  KCTD9 MUTATED KCTD9 WILD-TYPE 
             11             567 
[1] "ERN2 MUTATION ANALYSIS"
[1] 3
  ERN2 MUTATED ERN2 WILD-TYPE 
            19            559 
  ERN2 MUTATED ERN2 WILD-TYPE 
            19            559 
[1] "PTGER4 MUTATION ANALYSIS"
[1] 3
  PTGER4 MUTATED PTGER4 WILD-TYPE 
              15              563 
  PTGER4 MUTATED PTGER4 WILD-TYPE 
              15              563 
[1] "RUSC2 MUTATION ANALYSIS"
[1] 3
  RUSC2 MUTATED RUSC2 WILD-TYPE 
             23             555 
  RUSC2 MUTATED RUSC2 WILD-TYPE 
             23             555 
[1] "IGF2BP3 MUTATION ANALYSIS"
[1] 3
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                9               569 
  IGF2BP3 MUTATED IGF2BP3 WILD-TYPE 
                9               569 
[1] "QRFPR MUTATION ANALYSIS"
[1] 3
  QRFPR MUTATED QRFPR WILD-TYPE 
             17             561 
  QRFPR MUTATED QRFPR WILD-TYPE 
             17             561 
[1] "GGT6 MUTATION ANALYSIS"
[1] 3
  GGT6 MUTATED GGT6 WILD-TYPE 
             6            572 
  GGT6 MUTATED GGT6 WILD-TYPE 
             6            572 
[1] "SCIN MUTATION ANALYSIS"
[1] 3
  SCIN MUTATED SCIN WILD-TYPE 
            14            564 
  SCIN MUTATED SCIN WILD-TYPE 
            14            564 
[1] "SLC6A11 MUTATION ANALYSIS"
[1] 3
  SLC6A11 MUTATED SLC6A11 WILD-TYPE 
               13               565 
  SLC6A11 MUTATED SLC6A11 WILD-TYPE 
               13               565 
[1] "SMCHD1 MUTATION ANALYSIS"
[1] 3
  SMCHD1 MUTATED SMCHD1 WILD-TYPE 
              17              561 
  SMCHD1 MUTATED SMCHD1 WILD-TYPE 
              17              561 
[1] "PGCP MUTATION ANALYSIS"
[1] 3
  PGCP MUTATED PGCP WILD-TYPE 
            10            568 
  PGCP MUTATED PGCP WILD-TYPE 
            10            568 
[1] "TBL1XR1 MUTATION ANALYSIS"
[1] 3
  TBL1XR1 MUTATED TBL1XR1 WILD-TYPE 
               11               567 
  TBL1XR1 MUTATED TBL1XR1 WILD-TYPE 
               11               567 
[1] "TMEM127 MUTATION ANALYSIS"
[1] 3
  TMEM127 MUTATED TMEM127 WILD-TYPE 
                6               572 
  TMEM127 MUTATED TMEM127 WILD-TYPE 
                6               572 
[1] "APITD1 MUTATION ANALYSIS"
[1] 3
  APITD1 MUTATED APITD1 WILD-TYPE 
               6              572 
  APITD1 MUTATED APITD1 WILD-TYPE 
               6              572 
[1] "UGT2A3 MUTATION ANALYSIS"
[1] 3
  UGT2A3 MUTATED UGT2A3 WILD-TYPE 
               8              570 
  UGT2A3 MUTATED UGT2A3 WILD-TYPE 
               8              570 
[1] "ATP8B1 MUTATION ANALYSIS"
[1] 3
  ATP8B1 MUTATED ATP8B1 WILD-TYPE 
              21              557 
  ATP8B1 MUTATED ATP8B1 WILD-TYPE 
              21              557 
[1] "HIVEP1 MUTATION ANALYSIS"
[1] 3
  HIVEP1 MUTATED HIVEP1 WILD-TYPE 
              30              548 
  HIVEP1 MUTATED HIVEP1 WILD-TYPE 
              30              548 
[1] "RINT1 MUTATION ANALYSIS"
[1] 3
  RINT1 MUTATED RINT1 WILD-TYPE 
             10             568 
  RINT1 MUTATED RINT1 WILD-TYPE 
             10             568 
[1] "H2AFY MUTATION ANALYSIS"
[1] 3
  H2AFY MUTATED H2AFY WILD-TYPE 
              9             569 
  H2AFY MUTATED H2AFY WILD-TYPE 
              9             569 
[1] "TAF1L MUTATION ANALYSIS"
[1] 3
  TAF1L MUTATED TAF1L WILD-TYPE 
             38             540 
  TAF1L MUTATED TAF1L WILD-TYPE 
             38             540 
[1] "C1ORF177 MUTATION ANALYSIS"
[1] 3
  C1ORF177 MUTATED C1ORF177 WILD-TYPE 
                12                566 
  C1ORF177 MUTATED C1ORF177 WILD-TYPE 
                12                566 
[1] "DGKD MUTATION ANALYSIS"
[1] 3
  DGKD MUTATED DGKD WILD-TYPE 
             8            570 
  DGKD MUTATED DGKD WILD-TYPE 
             8            570 
[1] "TNFRSF25 MUTATION ANALYSIS"
[1] 3
  TNFRSF25 MUTATED TNFRSF25 WILD-TYPE 
                 8                570 
  TNFRSF25 MUTATED TNFRSF25 WILD-TYPE 
                 8                570 
[1] "CFI MUTATION ANALYSIS"
[1] 3
  CFI MUTATED CFI WILD-TYPE 
           14           564 
  CFI MUTATED CFI WILD-TYPE 
           14           564 
[1] "EMILIN3 MUTATION ANALYSIS"
[1] 3
  EMILIN3 MUTATED EMILIN3 WILD-TYPE 
               15               563 
  EMILIN3 MUTATED EMILIN3 WILD-TYPE 
               15               563 
[1] "EHBP1 MUTATION ANALYSIS"
[1] 3
  EHBP1 MUTATED EHBP1 WILD-TYPE 
             19             559 
  EHBP1 MUTATED EHBP1 WILD-TYPE 
             19             559 
[1] "HIC2 MUTATION ANALYSIS"
[1] 3
  HIC2 MUTATED HIC2 WILD-TYPE 
            19            559 
  HIC2 MUTATED HIC2 WILD-TYPE 
            19            559 
[1] "C9ORF86 MUTATION ANALYSIS"
[1] 3
  C9ORF86 MUTATED C9ORF86 WILD-TYPE 
               13               565 
  C9ORF86 MUTATED C9ORF86 WILD-TYPE 
               13               565 
[1] "ABCC1 MUTATION ANALYSIS"
[1] 3
  ABCC1 MUTATED ABCC1 WILD-TYPE 
             17             561 
  ABCC1 MUTATED ABCC1 WILD-TYPE 
             17             561 
[1] "ZNF750 MUTATION ANALYSIS"
[1] 3
  ZNF750 MUTATED ZNF750 WILD-TYPE 
              17              561 
  ZNF750 MUTATED ZNF750 WILD-TYPE 
              17              561 
[1] "ZNF7 MUTATION ANALYSIS"
[1] 3
  ZNF7 MUTATED ZNF7 WILD-TYPE 
             9            569 
  ZNF7 MUTATED ZNF7 WILD-TYPE 
             9            569 
[1] "TMEM64 MUTATION ANALYSIS"
[1] 3
  TMEM64 MUTATED TMEM64 WILD-TYPE 
               8              570 
  TMEM64 MUTATED TMEM64 WILD-TYPE 
               8              570 
[1] "HSP90B1 MUTATION ANALYSIS"
[1] 3
  HSP90B1 MUTATED HSP90B1 WILD-TYPE 
               11               567 
  HSP90B1 MUTATED HSP90B1 WILD-TYPE 
               11               567 
[1] "OR10J1 MUTATION ANALYSIS"
[1] 3
  OR10J1 MUTATED OR10J1 WILD-TYPE 
              14              564 
  OR10J1 MUTATED OR10J1 WILD-TYPE 
              14              564 
[1] "CPSF2 MUTATION ANALYSIS"
[1] 3
  CPSF2 MUTATED CPSF2 WILD-TYPE 
             10             568 
  CPSF2 MUTATED CPSF2 WILD-TYPE 
             10             568 
[1] "ZBTB40 MUTATION ANALYSIS"
[1] 3
  ZBTB40 MUTATED ZBTB40 WILD-TYPE 
              13              565 
  ZBTB40 MUTATED ZBTB40 WILD-TYPE 
              13              565 
[1] "RPS6KA6 MUTATION ANALYSIS"
[1] 3
  RPS6KA6 MUTATED RPS6KA6 WILD-TYPE 
               22               556 
  RPS6KA6 MUTATED RPS6KA6 WILD-TYPE 
               22               556 
[1] "ICAM3 MUTATION ANALYSIS"
[1] 3
  ICAM3 MUTATED ICAM3 WILD-TYPE 
              6             572 
  ICAM3 MUTATED ICAM3 WILD-TYPE 
              6             572 
[1] "PAX4 MUTATION ANALYSIS"
[1] 3
  PAX4 MUTATED PAX4 WILD-TYPE 
            14            564 
  PAX4 MUTATED PAX4 WILD-TYPE 
            14            564 
[1] "ZNF514 MUTATION ANALYSIS"
[1] 3
  ZNF514 MUTATED ZNF514 WILD-TYPE 
               9              569 
  ZNF514 MUTATED ZNF514 WILD-TYPE 
               9              569 
[1] "MSN MUTATION ANALYSIS"
[1] 3
  MSN MUTATED MSN WILD-TYPE 
           16           562 
  MSN MUTATED MSN WILD-TYPE 
           16           562 
[1] "ANKRD36 MUTATION ANALYSIS"
[1] 3
  ANKRD36 MUTATED ANKRD36 WILD-TYPE 
               23               555 
  ANKRD36 MUTATED ANKRD36 WILD-TYPE 
               23               555 
[1] "SIGLEC1 MUTATION ANALYSIS"
[1] 3
  SIGLEC1 MUTATED SIGLEC1 WILD-TYPE 
               29               549 
  SIGLEC1 MUTATED SIGLEC1 WILD-TYPE 
               29               549 
[1] "CLGN MUTATION ANALYSIS"
[1] 3
  CLGN MUTATED CLGN WILD-TYPE 
            10            568 
  CLGN MUTATED CLGN WILD-TYPE 
            10            568 
[1] "IL7R MUTATION ANALYSIS"
[1] 3
  IL7R MUTATED IL7R WILD-TYPE 
            17            561 
  IL7R MUTATED IL7R WILD-TYPE 
            17            561 
[1] "AVEN MUTATION ANALYSIS"
[1] 3
  AVEN MUTATED AVEN WILD-TYPE 
             7            571 
  AVEN MUTATED AVEN WILD-TYPE 
             7            571 
[1] "CCDC37 MUTATION ANALYSIS"
[1] 3
  CCDC37 MUTATED CCDC37 WILD-TYPE 
              17              561 
  CCDC37 MUTATED CCDC37 WILD-TYPE 
              17              561 
[1] "SPATA5L1 MUTATION ANALYSIS"
[1] 3
  SPATA5L1 MUTATED SPATA5L1 WILD-TYPE 
                 8                570 
  SPATA5L1 MUTATED SPATA5L1 WILD-TYPE 
                 8                570 
[1] "SERPINB10 MUTATION ANALYSIS"
[1] 3
  SERPINB10 MUTATED SERPINB10 WILD-TYPE 
                 10                 568 
  SERPINB10 MUTATED SERPINB10 WILD-TYPE 
                 10                 568 
[1] "PIWIL2 MUTATION ANALYSIS"
[1] 3
  PIWIL2 MUTATED PIWIL2 WILD-TYPE 
              12              566 
  PIWIL2 MUTATED PIWIL2 WILD-TYPE 
              12              566 
[1] "FAM46D MUTATION ANALYSIS"
[1] 3
  FAM46D MUTATED FAM46D WILD-TYPE 
              13              565 
  FAM46D MUTATED FAM46D WILD-TYPE 
              13              565 
[1] "LIPH MUTATION ANALYSIS"
[1] 3
  LIPH MUTATED LIPH WILD-TYPE 
             9            569 
  LIPH MUTATED LIPH WILD-TYPE 
             9            569 
[1] "GOLT1B MUTATION ANALYSIS"
[1] 3
  GOLT1B MUTATED GOLT1B WILD-TYPE 
               5              573 
  GOLT1B MUTATED GOLT1B WILD-TYPE 
               5              573 
[1] "HMCN1 MUTATION ANALYSIS"
[1] 3
  HMCN1 MUTATED HMCN1 WILD-TYPE 
            105             473 
  HMCN1 MUTATED HMCN1 WILD-TYPE 
            105             473 
[1] "SERPINB7 MUTATION ANALYSIS"
[1] 3
  SERPINB7 MUTATED SERPINB7 WILD-TYPE 
                 6                572 
  SERPINB7 MUTATED SERPINB7 WILD-TYPE 
                 6                572 
[1] "TLE1 MUTATION ANALYSIS"
[1] 3
  TLE1 MUTATED TLE1 WILD-TYPE 
            14            564 
  TLE1 MUTATED TLE1 WILD-TYPE 
            14            564 
[1] "BRMS1 MUTATION ANALYSIS"
[1] 3
  BRMS1 MUTATED BRMS1 WILD-TYPE 
              6             572 
  BRMS1 MUTATED BRMS1 WILD-TYPE 
              6             572 
[1] "GATA3 MUTATION ANALYSIS"
[1] 3
  GATA3 MUTATED GATA3 WILD-TYPE 
             21             557 
  GATA3 MUTATED GATA3 WILD-TYPE 
             21             557 
[1] "FAM18A MUTATION ANALYSIS"
[1] 3
  FAM18A MUTATED FAM18A WILD-TYPE 
               4              574 
  FAM18A MUTATED FAM18A WILD-TYPE 
               4              574 
[1] "GPATCH2 MUTATION ANALYSIS"
[1] 3
  GPATCH2 MUTATED GPATCH2 WILD-TYPE 
               10               568 
  GPATCH2 MUTATED GPATCH2 WILD-TYPE 
               10               568 
[1] "OR6C70 MUTATION ANALYSIS"
[1] 3
  OR6C70 MUTATED OR6C70 WILD-TYPE 
               6              572 
  OR6C70 MUTATED OR6C70 WILD-TYPE 
               6              572 
[1] "SPIB MUTATION ANALYSIS"
[1] 3
  SPIB MUTATED SPIB WILD-TYPE 
             9            569 
  SPIB MUTATED SPIB WILD-TYPE 
             9            569 
[1] "SULF1 MUTATION ANALYSIS"
[1] 3
  SULF1 MUTATED SULF1 WILD-TYPE 
             31             547 
  SULF1 MUTATED SULF1 WILD-TYPE 
             31             547 
[1] "LPHN2 MUTATION ANALYSIS"
[1] 3
  LPHN2 MUTATED LPHN2 WILD-TYPE 
             26             552 
  LPHN2 MUTATED LPHN2 WILD-TYPE 
             26             552 
[1] "TMEM161A MUTATION ANALYSIS"
[1] 3
  TMEM161A MUTATED TMEM161A WILD-TYPE 
                10                568 
  TMEM161A MUTATED TMEM161A WILD-TYPE 
                10                568 
[1] "PLXNB1 MUTATION ANALYSIS"
[1] 3
  PLXNB1 MUTATED PLXNB1 WILD-TYPE 
              31              547 
  PLXNB1 MUTATED PLXNB1 WILD-TYPE 
              31              547 
[1] "MYOCD MUTATION ANALYSIS"
[1] 3
  MYOCD MUTATED MYOCD WILD-TYPE 
             18             560 
  MYOCD MUTATED MYOCD WILD-TYPE 
             18             560 
[1] "EIF4E1B MUTATION ANALYSIS"
[1] 3
  EIF4E1B MUTATED EIF4E1B WILD-TYPE 
                9               569 
  EIF4E1B MUTATED EIF4E1B WILD-TYPE 
                9               569 
[1] "PKD2 MUTATION ANALYSIS"
[1] 3
  PKD2 MUTATED PKD2 WILD-TYPE 
            13            565 
  PKD2 MUTATED PKD2 WILD-TYPE 
            13            565 
[1] "APOA1BP MUTATION ANALYSIS"
[1] 3
  APOA1BP MUTATED APOA1BP WILD-TYPE 
                6               572 
  APOA1BP MUTATED APOA1BP WILD-TYPE 
                6               572 
[1] "ATP2C1 MUTATION ANALYSIS"
[1] 3
  ATP2C1 MUTATED ATP2C1 WILD-TYPE 
              20              558 
  ATP2C1 MUTATED ATP2C1 WILD-TYPE 
              20              558 
[1] "FER1L6 MUTATION ANALYSIS"
[1] 3
  FER1L6 MUTATED FER1L6 WILD-TYPE 
              31              547 
  FER1L6 MUTATED FER1L6 WILD-TYPE 
              31              547 
[1] "MGA MUTATION ANALYSIS"
[1] 3
  MGA MUTATED MGA WILD-TYPE 
           41           537 
  MGA MUTATED MGA WILD-TYPE 
           41           537 
[1] "MYCT1 MUTATION ANALYSIS"
[1] 3
  MYCT1 MUTATED MYCT1 WILD-TYPE 
             11             567 
  MYCT1 MUTATED MYCT1 WILD-TYPE 
             11             567 
[1] "KCNQ1 MUTATION ANALYSIS"
[1] 3
  KCNQ1 MUTATED KCNQ1 WILD-TYPE 
              6             572 
  KCNQ1 MUTATED KCNQ1 WILD-TYPE 
              6             572 
[1] "LIMCH1 MUTATION ANALYSIS"
[1] 3
  LIMCH1 MUTATED LIMCH1 WILD-TYPE 
              16              562 
  LIMCH1 MUTATED LIMCH1 WILD-TYPE 
              16              562 
[1] "KRTAP5-1 MUTATION ANALYSIS"
[1] 3
  KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE 
                10                568 
  KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE 
                10                568 
[1] "C20ORF7 MUTATION ANALYSIS"
[1] 3
  C20ORF7 MUTATED C20ORF7 WILD-TYPE 
                6               572 
  C20ORF7 MUTATED C20ORF7 WILD-TYPE 
                6               572 
[1] "KCNH2 MUTATION ANALYSIS"
[1] 3
  KCNH2 MUTATED KCNH2 WILD-TYPE 
             15             563 
  KCNH2 MUTATED KCNH2 WILD-TYPE 
             15             563 
[1] "XRCC2 MUTATION ANALYSIS"
[1] 3
  XRCC2 MUTATED XRCC2 WILD-TYPE 
              7             571 
  XRCC2 MUTATED XRCC2 WILD-TYPE 
              7             571 
[1] "EIF4G1 MUTATION ANALYSIS"
[1] 3
  EIF4G1 MUTATED EIF4G1 WILD-TYPE 
              26              552 
  EIF4G1 MUTATED EIF4G1 WILD-TYPE 
              26              552 
[1] "PTPN3 MUTATION ANALYSIS"
[1] 3
  PTPN3 MUTATED PTPN3 WILD-TYPE 
             20             558 
  PTPN3 MUTATED PTPN3 WILD-TYPE 
             20             558 
[1] "CRYBB1 MUTATION ANALYSIS"
[1] 3
  CRYBB1 MUTATED CRYBB1 WILD-TYPE 
              13              565 
  CRYBB1 MUTATED CRYBB1 WILD-TYPE 
              13              565 
[1] "DHX9 MUTATION ANALYSIS"
[1] 3
  DHX9 MUTATED DHX9 WILD-TYPE 
            20            558 
  DHX9 MUTATED DHX9 WILD-TYPE 
            20            558 
[1] "RELB MUTATION ANALYSIS"
[1] 3
  RELB MUTATED RELB WILD-TYPE 
            14            564 
  RELB MUTATED RELB WILD-TYPE 
            14            564 
[1] "GPATCH8 MUTATION ANALYSIS"
[1] 3
  GPATCH8 MUTATED GPATCH8 WILD-TYPE 
               32               546 
  GPATCH8 MUTATED GPATCH8 WILD-TYPE 
               32               546 
[1] "ZCCHC7 MUTATION ANALYSIS"
[1] 3
  ZCCHC7 MUTATED ZCCHC7 WILD-TYPE 
               7              571 
  ZCCHC7 MUTATED ZCCHC7 WILD-TYPE 
               7              571 
[1] "VWA3A MUTATION ANALYSIS"
[1] 3
  VWA3A MUTATED VWA3A WILD-TYPE 
             15             563 
  VWA3A MUTATED VWA3A WILD-TYPE 
             15             563 
[1] "SET MUTATION ANALYSIS"
[1] 3
  SET MUTATED SET WILD-TYPE 
           10           568 
  SET MUTATED SET WILD-TYPE 
           10           568 
[1] "RAVER1 MUTATION ANALYSIS"
[1] 3
  RAVER1 MUTATED RAVER1 WILD-TYPE 
               9              569 
  RAVER1 MUTATED RAVER1 WILD-TYPE 
               9              569 
[1] "PTPRU MUTATION ANALYSIS"
[1] 3
  PTPRU MUTATED PTPRU WILD-TYPE 
             30             548 
  PTPRU MUTATED PTPRU WILD-TYPE 
             30             548 
[1] "SOS2 MUTATION ANALYSIS"
[1] 3
  SOS2 MUTATED SOS2 WILD-TYPE 
            19            559 
  SOS2 MUTATED SOS2 WILD-TYPE 
            19            559 
[1] "HSF4 MUTATION ANALYSIS"
[1] 3
  HSF4 MUTATED HSF4 WILD-TYPE 
            10            568 
  HSF4 MUTATED HSF4 WILD-TYPE 
            10            568 
[1] "OR51F1 MUTATION ANALYSIS"
[1] 3
  OR51F1 MUTATED OR51F1 WILD-TYPE 
              12              566 
  OR51F1 MUTATED OR51F1 WILD-TYPE 
              12              566 
[1] "DNAH10 MUTATION ANALYSIS"
[1] 3
  DNAH10 MUTATED DNAH10 WILD-TYPE 
              63              515 
  DNAH10 MUTATED DNAH10 WILD-TYPE 
              63              515 
[1] "PTX4 MUTATION ANALYSIS"
[1] 3
  PTX4 MUTATED PTX4 WILD-TYPE 
            16            562 
  PTX4 MUTATED PTX4 WILD-TYPE 
            16            562 
[1] "AMELX MUTATION ANALYSIS"
[1] 3
  AMELX MUTATED AMELX WILD-TYPE 
              6             572 
  AMELX MUTATED AMELX WILD-TYPE 
              6             572 
[1] "CHD3 MUTATION ANALYSIS"
[1] 3
  CHD3 MUTATED CHD3 WILD-TYPE 
            38            540 
  CHD3 MUTATED CHD3 WILD-TYPE 
            38            540 
[1] "PCDH15 MUTATION ANALYSIS"
[1] 3
  PCDH15 MUTATED PCDH15 WILD-TYPE 
              81              497 
  PCDH15 MUTATED PCDH15 WILD-TYPE 
              81              497 
[1] "NKD2 MUTATION ANALYSIS"
[1] 3
  NKD2 MUTATED NKD2 WILD-TYPE 
             6            572 
  NKD2 MUTATED NKD2 WILD-TYPE 
             6            572 
[1] "BUB1B MUTATION ANALYSIS"
[1] 3
  BUB1B MUTATED BUB1B WILD-TYPE 
             15             563 
  BUB1B MUTATED BUB1B WILD-TYPE 
             15             563 
[1] "EXOSC10 MUTATION ANALYSIS"
[1] 3
  EXOSC10 MUTATED EXOSC10 WILD-TYPE 
               15               563 
  EXOSC10 MUTATED EXOSC10 WILD-TYPE 
               15               563 
[1] "KCNN3 MUTATION ANALYSIS"
[1] 3
  KCNN3 MUTATED KCNN3 WILD-TYPE 
             15             563 
  KCNN3 MUTATED KCNN3 WILD-TYPE 
             15             563 
[1] "TIE1 MUTATION ANALYSIS"
[1] 3
  TIE1 MUTATED TIE1 WILD-TYPE 
            28            550 
  TIE1 MUTATED TIE1 WILD-TYPE 
            28            550 
[1] "MBOAT2 MUTATION ANALYSIS"
[1] 3
  MBOAT2 MUTATED MBOAT2 WILD-TYPE 
               4              574 
  MBOAT2 MUTATED MBOAT2 WILD-TYPE 
               4              574 
[1] "HORMAD1 MUTATION ANALYSIS"
[1] 3
  HORMAD1 MUTATED HORMAD1 WILD-TYPE 
                9               569 
  HORMAD1 MUTATED HORMAD1 WILD-TYPE 
                9               569 
[1] "KIAA1549 MUTATION ANALYSIS"
[1] 3
  KIAA1549 MUTATED KIAA1549 WILD-TYPE 
                33                545 
  KIAA1549 MUTATED KIAA1549 WILD-TYPE 
                33                545 
[1] "COL4A3BP MUTATION ANALYSIS"
[1] 3
  COL4A3BP MUTATED COL4A3BP WILD-TYPE 
                 6                572 
  COL4A3BP MUTATED COL4A3BP WILD-TYPE 
                 6                572 
[1] "HCRTR1 MUTATION ANALYSIS"
[1] 3
  HCRTR1 MUTATED HCRTR1 WILD-TYPE 
               6              572 
  HCRTR1 MUTATED HCRTR1 WILD-TYPE 
               6              572 
[1] "DHRS9 MUTATION ANALYSIS"
[1] 3
  DHRS9 MUTATED DHRS9 WILD-TYPE 
             10             568 
  DHRS9 MUTATED DHRS9 WILD-TYPE 
             10             568 
[1] "MBD3 MUTATION ANALYSIS"
[1] 3
  MBD3 MUTATED MBD3 WILD-TYPE 
            14            564 
  MBD3 MUTATED MBD3 WILD-TYPE 
            14            564 
[1] "ERI1 MUTATION ANALYSIS"
[1] 3
  ERI1 MUTATED ERI1 WILD-TYPE 
             4            574 
  ERI1 MUTATED ERI1 WILD-TYPE 
             4            574 
[1] "POU5F1B MUTATION ANALYSIS"
[1] 3
  POU5F1B MUTATED POU5F1B WILD-TYPE 
                9               569 
  POU5F1B MUTATED POU5F1B WILD-TYPE 
                9               569 
[1] "MYCN MUTATION ANALYSIS"
[1] 3
  MYCN MUTATED MYCN WILD-TYPE 
             8            570 
  MYCN MUTATED MYCN WILD-TYPE 
             8            570 
[1] "TCN2 MUTATION ANALYSIS"
[1] 3
  TCN2 MUTATED TCN2 WILD-TYPE 
            12            566 
  TCN2 MUTATED TCN2 WILD-TYPE 
            12            566 
[1] "IFT74 MUTATION ANALYSIS"
[1] 3
  IFT74 MUTATED IFT74 WILD-TYPE 
             12             566 
  IFT74 MUTATED IFT74 WILD-TYPE 
             12             566 
[1] "EVI2B MUTATION ANALYSIS"
[1] 3
  EVI2B MUTATED EVI2B WILD-TYPE 
              9             569 
  EVI2B MUTATED EVI2B WILD-TYPE 
              9             569 
[1] "PTPRJ MUTATION ANALYSIS"
[1] 3
  PTPRJ MUTATED PTPRJ WILD-TYPE 
             34             544 
  PTPRJ MUTATED PTPRJ WILD-TYPE 
             34             544 
[1] "GPR114 MUTATION ANALYSIS"
[1] 3
  GPR114 MUTATED GPR114 WILD-TYPE 
              10              568 
  GPR114 MUTATED GPR114 WILD-TYPE 
              10              568 
[1] "TUBGCP4 MUTATION ANALYSIS"
[1] 3
  TUBGCP4 MUTATED TUBGCP4 WILD-TYPE 
                8               570 
  TUBGCP4 MUTATED TUBGCP4 WILD-TYPE 
                8               570 
[1] "F13A1 MUTATION ANALYSIS"
[1] 3
  F13A1 MUTATED F13A1 WILD-TYPE 
             19             559 
  F13A1 MUTATED F13A1 WILD-TYPE 
             19             559 
[1] "ZBTB49 MUTATION ANALYSIS"
[1] 3
  ZBTB49 MUTATED ZBTB49 WILD-TYPE 
              11              567 
  ZBTB49 MUTATED ZBTB49 WILD-TYPE 
              11              567 
[1] "NUPL2 MUTATION ANALYSIS"
[1] 3
  NUPL2 MUTATED NUPL2 WILD-TYPE 
              9             569 
  NUPL2 MUTATED NUPL2 WILD-TYPE 
              9             569 
[1] "RAI2 MUTATION ANALYSIS"
[1] 3
  RAI2 MUTATED RAI2 WILD-TYPE 
             9            569 
  RAI2 MUTATED RAI2 WILD-TYPE 
             9            569 
[1] "LEFTY1 MUTATION ANALYSIS"
[1] 3
  LEFTY1 MUTATED LEFTY1 WILD-TYPE 
               3              575 
  LEFTY1 MUTATED LEFTY1 WILD-TYPE 
               3              575 
[1] "IKBIP MUTATION ANALYSIS"
[1] 3
  IKBIP MUTATED IKBIP WILD-TYPE 
              3             575 
  IKBIP MUTATED IKBIP WILD-TYPE 
              3             575 
[1] "SLC12A1 MUTATION ANALYSIS"
[1] 3
  SLC12A1 MUTATED SLC12A1 WILD-TYPE 
               29               549 
  SLC12A1 MUTATED SLC12A1 WILD-TYPE 
               29               549 
[1] "CARD11 MUTATION ANALYSIS"
[1] 3
  CARD11 MUTATED CARD11 WILD-TYPE 
              29              549 
  CARD11 MUTATED CARD11 WILD-TYPE 
              29              549 
[1] "OLFM1 MUTATION ANALYSIS"
[1] 3
  OLFM1 MUTATED OLFM1 WILD-TYPE 
             15             563 
  OLFM1 MUTATED OLFM1 WILD-TYPE 
             15             563 
[1] "KIF27 MUTATION ANALYSIS"
[1] 3
  KIF27 MUTATED KIF27 WILD-TYPE 
             20             558 
  KIF27 MUTATED KIF27 WILD-TYPE 
             20             558 
[1] "ARSJ MUTATION ANALYSIS"
[1] 3
  ARSJ MUTATED ARSJ WILD-TYPE 
            10            568 
  ARSJ MUTATED ARSJ WILD-TYPE 
            10            568 
[1] "PRICKLE4 MUTATION ANALYSIS"
[1] 3
  PRICKLE4 MUTATED PRICKLE4 WILD-TYPE 
                 7                571 
  PRICKLE4 MUTATED PRICKLE4 WILD-TYPE 
                 7                571 
[1] "PIGO MUTATION ANALYSIS"
[1] 3
  PIGO MUTATED PIGO WILD-TYPE 
            12            566 
  PIGO MUTATED PIGO WILD-TYPE 
            12            566 
[1] "EFHC1 MUTATION ANALYSIS"
[1] 3
  EFHC1 MUTATED EFHC1 WILD-TYPE 
             10             568 
  EFHC1 MUTATED EFHC1 WILD-TYPE 
             10             568 
[1] "EPB41L5 MUTATION ANALYSIS"
[1] 3
  EPB41L5 MUTATED EPB41L5 WILD-TYPE 
               11               567 
  EPB41L5 MUTATED EPB41L5 WILD-TYPE 
               11               567 
[1] "OR52A5 MUTATION ANALYSIS"
[1] 3
  OR52A5 MUTATED OR52A5 WILD-TYPE 
              11              567 
  OR52A5 MUTATED OR52A5 WILD-TYPE 
              11              567 
[1] "ASB5 MUTATION ANALYSIS"
[1] 3
  ASB5 MUTATED ASB5 WILD-TYPE 
            11            567 
  ASB5 MUTATED ASB5 WILD-TYPE 
            11            567 
[1] "MMP10 MUTATION ANALYSIS"
[1] 3
  MMP10 MUTATED MMP10 WILD-TYPE 
             10             568 
  MMP10 MUTATED MMP10 WILD-TYPE 
             10             568 
[1] "FGF5 MUTATION ANALYSIS"
[1] 3
  FGF5 MUTATED FGF5 WILD-TYPE 
             8            570 
  FGF5 MUTATED FGF5 WILD-TYPE 
             8            570 
[1] "CWH43 MUTATION ANALYSIS"
[1] 3
  CWH43 MUTATED CWH43 WILD-TYPE 
             12             566 
  CWH43 MUTATED CWH43 WILD-TYPE 
             12             566 
[1] "MTSS1 MUTATION ANALYSIS"
[1] 3
  MTSS1 MUTATED MTSS1 WILD-TYPE 
             15             563 
  MTSS1 MUTATED MTSS1 WILD-TYPE 
             15             563 
[1] "KIAA2018 MUTATION ANALYSIS"
[1] 3
  KIAA2018 MUTATED KIAA2018 WILD-TYPE 
                32                546 
  KIAA2018 MUTATED KIAA2018 WILD-TYPE 
                32                546 
[1] "SMC5 MUTATION ANALYSIS"
[1] 3
  SMC5 MUTATED SMC5 WILD-TYPE 
            13            565 
  SMC5 MUTATED SMC5 WILD-TYPE 
            13            565 
[1] "BAG4 MUTATION ANALYSIS"
[1] 3
  BAG4 MUTATED BAG4 WILD-TYPE 
             5            573 
  BAG4 MUTATED BAG4 WILD-TYPE 
             5            573 
[1] "ZMYND8 MUTATION ANALYSIS"
[1] 3
  ZMYND8 MUTATED ZMYND8 WILD-TYPE 
              21              557 
  ZMYND8 MUTATED ZMYND8 WILD-TYPE 
              21              557 
[1] "MPP5 MUTATION ANALYSIS"
[1] 3
  MPP5 MUTATED MPP5 WILD-TYPE 
             9            569 
  MPP5 MUTATED MPP5 WILD-TYPE 
             9            569 
[1] "ECSIT MUTATION ANALYSIS"
[1] 3
  ECSIT MUTATED ECSIT WILD-TYPE 
              8             570 
  ECSIT MUTATED ECSIT WILD-TYPE 
              8             570 
[1] "CSNK2A2 MUTATION ANALYSIS"
[1] 3
  CSNK2A2 MUTATED CSNK2A2 WILD-TYPE 
                9               569 
  CSNK2A2 MUTATED CSNK2A2 WILD-TYPE 
                9               569 
[1] "CCR9 MUTATION ANALYSIS"
[1] 3
  CCR9 MUTATED CCR9 WILD-TYPE 
             8            570 
  CCR9 MUTATED CCR9 WILD-TYPE 
             8            570 
[1] "PODN MUTATION ANALYSIS"
[1] 3
  PODN MUTATED PODN WILD-TYPE 
            15            563 
  PODN MUTATED PODN WILD-TYPE 
            15            563 
[1] "VWA1 MUTATION ANALYSIS"
[1] 3
  VWA1 MUTATED VWA1 WILD-TYPE 
             8            570 
  VWA1 MUTATED VWA1 WILD-TYPE 
             8            570 
[1] "PADI3 MUTATION ANALYSIS"
[1] 3
  PADI3 MUTATED PADI3 WILD-TYPE 
             15             563 
  PADI3 MUTATED PADI3 WILD-TYPE 
             15             563 
[1] "BMPR2 MUTATION ANALYSIS"
[1] 3
  BMPR2 MUTATED BMPR2 WILD-TYPE 
             22             556 
  BMPR2 MUTATED BMPR2 WILD-TYPE 
             22             556 
[1] "SETD6 MUTATION ANALYSIS"
[1] 3
  SETD6 MUTATED SETD6 WILD-TYPE 
              8             570 
  SETD6 MUTATED SETD6 WILD-TYPE 
              8             570 
[1] "GPR84 MUTATION ANALYSIS"
[1] 3
  GPR84 MUTATED GPR84 WILD-TYPE 
              5             573 
  GPR84 MUTATED GPR84 WILD-TYPE 
              5             573 
[1] "TTC3 MUTATION ANALYSIS"
[1] 3
  TTC3 MUTATED TTC3 WILD-TYPE 
            32            546 
  TTC3 MUTATED TTC3 WILD-TYPE 
            32            546 
[1] "PLK2 MUTATION ANALYSIS"
[1] 3
  PLK2 MUTATED PLK2 WILD-TYPE 
             8            570 
  PLK2 MUTATED PLK2 WILD-TYPE 
             8            570 
[1] "ABCC2 MUTATION ANALYSIS"
[1] 3
  ABCC2 MUTATED ABCC2 WILD-TYPE 
             22             556 
  ABCC2 MUTATED ABCC2 WILD-TYPE 
             22             556 
[1] "CXXC1 MUTATION ANALYSIS"
[1] 3
  CXXC1 MUTATED CXXC1 WILD-TYPE 
             16             562 
  CXXC1 MUTATED CXXC1 WILD-TYPE 
             16             562 
[1] "DGAT1 MUTATION ANALYSIS"
[1] 3
  DGAT1 MUTATED DGAT1 WILD-TYPE 
              9             569 
  DGAT1 MUTATED DGAT1 WILD-TYPE 
              9             569 
[1] "ZNF506 MUTATION ANALYSIS"
[1] 3
  ZNF506 MUTATED ZNF506 WILD-TYPE 
               9              569 
  ZNF506 MUTATED ZNF506 WILD-TYPE 
               9              569 
[1] "ATP2B1 MUTATION ANALYSIS"
[1] 3
  ATP2B1 MUTATED ATP2B1 WILD-TYPE 
              19              559 
  ATP2B1 MUTATED ATP2B1 WILD-TYPE 
              19              559 
[1] "PI16 MUTATION ANALYSIS"
[1] 3
  PI16 MUTATED PI16 WILD-TYPE 
             6            572 
  PI16 MUTATED PI16 WILD-TYPE 
             6            572 
[1] "TOPBP1 MUTATION ANALYSIS"
[1] 3
  TOPBP1 MUTATED TOPBP1 WILD-TYPE 
              22              556 
  TOPBP1 MUTATED TOPBP1 WILD-TYPE 
              22              556 
[1] "CSF3R MUTATION ANALYSIS"
[1] 3
  CSF3R MUTATED CSF3R WILD-TYPE 
             17             561 
  CSF3R MUTATED CSF3R WILD-TYPE 
             17             561 
[1] "LRP4 MUTATION ANALYSIS"
[1] 3
  LRP4 MUTATED LRP4 WILD-TYPE 
            25            553 
  LRP4 MUTATED LRP4 WILD-TYPE 
            25            553 
[1] "UGDH MUTATION ANALYSIS"
[1] 3
  UGDH MUTATED UGDH WILD-TYPE 
            11            567 
  UGDH MUTATED UGDH WILD-TYPE 
            11            567 
[1] "C1QA MUTATION ANALYSIS"
[1] 3
  C1QA MUTATED C1QA WILD-TYPE 
             5            573 
  C1QA MUTATED C1QA WILD-TYPE 
             5            573 
[1] "ZC3H3 MUTATION ANALYSIS"
[1] 3
  ZC3H3 MUTATED ZC3H3 WILD-TYPE 
             22             556 
  ZC3H3 MUTATED ZC3H3 WILD-TYPE 
             22             556 
[1] "CHMP7 MUTATION ANALYSIS"
[1] 3
  CHMP7 MUTATED CHMP7 WILD-TYPE 
              6             572 
  CHMP7 MUTATED CHMP7 WILD-TYPE 
              6             572 
[1] "PTPRT MUTATION ANALYSIS"
[1] 3
  PTPRT MUTATED PTPRT WILD-TYPE 
             57             521 
  PTPRT MUTATED PTPRT WILD-TYPE 
             57             521 
[1] "ZNF687 MUTATION ANALYSIS"
[1] 3
  ZNF687 MUTATED ZNF687 WILD-TYPE 
              14              564 
  ZNF687 MUTATED ZNF687 WILD-TYPE 
              14              564 
[1] "FAM111A MUTATION ANALYSIS"
[1] 3
  FAM111A MUTATED FAM111A WILD-TYPE 
               13               565 
  FAM111A MUTATED FAM111A WILD-TYPE 
               13               565 
[1] "INTS8 MUTATION ANALYSIS"
[1] 3
  INTS8 MUTATED INTS8 WILD-TYPE 
             20             558 
  INTS8 MUTATED INTS8 WILD-TYPE 
             20             558 
[1] "IL1R2 MUTATION ANALYSIS"
[1] 3
  IL1R2 MUTATED IL1R2 WILD-TYPE 
             12             566 
  IL1R2 MUTATED IL1R2 WILD-TYPE 
             12             566 
[1] "ALCAM MUTATION ANALYSIS"
[1] 3
  ALCAM MUTATED ALCAM WILD-TYPE 
             14             564 
  ALCAM MUTATED ALCAM WILD-TYPE 
             14             564 
[1] "TIA1 MUTATION ANALYSIS"
[1] 3
  TIA1 MUTATED TIA1 WILD-TYPE 
             6            572 
  TIA1 MUTATED TIA1 WILD-TYPE 
             6            572 
[1] "C6ORF72 MUTATION ANALYSIS"
[1] 3
  C6ORF72 MUTATED C6ORF72 WILD-TYPE 
                8               570 
  C6ORF72 MUTATED C6ORF72 WILD-TYPE 
                8               570 
[1] "DEK MUTATION ANALYSIS"
[1] 3
  DEK MUTATED DEK WILD-TYPE 
            9           569 
  DEK MUTATED DEK WILD-TYPE 
            9           569 
[1] "UBXN6 MUTATION ANALYSIS"
[1] 3
  UBXN6 MUTATED UBXN6 WILD-TYPE 
             14             564 
  UBXN6 MUTATED UBXN6 WILD-TYPE 
             14             564 
[1] "FGF13 MUTATION ANALYSIS"
[1] 3
  FGF13 MUTATED FGF13 WILD-TYPE 
             19             559 
  FGF13 MUTATED FGF13 WILD-TYPE 
             19             559 
[1] "CHD1 MUTATION ANALYSIS"
[1] 3
  CHD1 MUTATED CHD1 WILD-TYPE 
            20            558 
  CHD1 MUTATED CHD1 WILD-TYPE 
            20            558 
[1] "SLC30A5 MUTATION ANALYSIS"
[1] 3
  SLC30A5 MUTATED SLC30A5 WILD-TYPE 
                8               570 
  SLC30A5 MUTATED SLC30A5 WILD-TYPE 
                8               570 
[1] "PHACTR2 MUTATION ANALYSIS"
[1] 3
  PHACTR2 MUTATED PHACTR2 WILD-TYPE 
               18               560 
  PHACTR2 MUTATED PHACTR2 WILD-TYPE 
               18               560 
[1] "YIF1A MUTATION ANALYSIS"
[1] 3
  YIF1A MUTATED YIF1A WILD-TYPE 
              5             573 
  YIF1A MUTATED YIF1A WILD-TYPE 
              5             573 
[1] "ARID3A MUTATION ANALYSIS"
[1] 3
  ARID3A MUTATED ARID3A WILD-TYPE 
               6              572 
  ARID3A MUTATED ARID3A WILD-TYPE 
               6              572 
[1] "IRF2BP2 MUTATION ANALYSIS"
[1] 3
  IRF2BP2 MUTATED IRF2BP2 WILD-TYPE 
                7               571 
  IRF2BP2 MUTATED IRF2BP2 WILD-TYPE 
                7               571 
[1] "ABCF3 MUTATION ANALYSIS"
[1] 3
  ABCF3 MUTATED ABCF3 WILD-TYPE 
             13             565 
  ABCF3 MUTATED ABCF3 WILD-TYPE 
             13             565 
[1] "DTNBP1 MUTATION ANALYSIS"
[1] 3
  DTNBP1 MUTATED DTNBP1 WILD-TYPE 
               7              571 
  DTNBP1 MUTATED DTNBP1 WILD-TYPE 
               7              571 
[1] "CHST15 MUTATION ANALYSIS"
[1] 3
  CHST15 MUTATED CHST15 WILD-TYPE 
              17              561 
  CHST15 MUTATED CHST15 WILD-TYPE 
              17              561 
[1] "SI MUTATION ANALYSIS"
[1] 3
  SI MUTATED SI WILD-TYPE 
          48          530 
  SI MUTATED SI WILD-TYPE 
          48          530 
[1] "RP1L1 MUTATION ANALYSIS"
[1] 3
  RP1L1 MUTATED RP1L1 WILD-TYPE 
             40             538 
  RP1L1 MUTATED RP1L1 WILD-TYPE 
             40             538 
[1] "ITGAL MUTATION ANALYSIS"
[1] 3
  ITGAL MUTATED ITGAL WILD-TYPE 
             26             552 
  ITGAL MUTATED ITGAL WILD-TYPE 
             26             552 
[1] "PCLO MUTATION ANALYSIS"
[1] 3
  PCLO MUTATED PCLO WILD-TYPE 
           109            469 
  PCLO MUTATED PCLO WILD-TYPE 
           109            469 
[1] "NPR3 MUTATION ANALYSIS"
[1] 3
  NPR3 MUTATED NPR3 WILD-TYPE 
            11            567 
  NPR3 MUTATED NPR3 WILD-TYPE 
            11            567 
[1] "PTPN12 MUTATION ANALYSIS"
[1] 3
  PTPN12 MUTATED PTPN12 WILD-TYPE 
              13              565 
  PTPN12 MUTATED PTPN12 WILD-TYPE 
              13              565 
[1] "MTSS1L MUTATION ANALYSIS"
[1] 3
  MTSS1L MUTATED MTSS1L WILD-TYPE 
              12              566 
  MTSS1L MUTATED MTSS1L WILD-TYPE 
              12              566 
[1] "ABCA7 MUTATION ANALYSIS"
[1] 3
  ABCA7 MUTATED ABCA7 WILD-TYPE 
             25             553 
  ABCA7 MUTATED ABCA7 WILD-TYPE 
             25             553 
[1] "OR1L3 MUTATION ANALYSIS"
[1] 3
  OR1L3 MUTATED OR1L3 WILD-TYPE 
              8             570 
  OR1L3 MUTATED OR1L3 WILD-TYPE 
              8             570 
[1] "HOOK1 MUTATION ANALYSIS"
[1] 3
  HOOK1 MUTATED HOOK1 WILD-TYPE 
             11             567 
  HOOK1 MUTATED HOOK1 WILD-TYPE 
             11             567 
[1] "MAP7D1 MUTATION ANALYSIS"
[1] 3
  MAP7D1 MUTATED MAP7D1 WILD-TYPE 
              17              561 
  MAP7D1 MUTATED MAP7D1 WILD-TYPE 
              17              561 
[1] "VPRBP MUTATION ANALYSIS"
[1] 3
  VPRBP MUTATED VPRBP WILD-TYPE 
             11             567 
  VPRBP MUTATED VPRBP WILD-TYPE 
             11             567 
[1] "OR2M5 MUTATION ANALYSIS"
[1] 3
  OR2M5 MUTATED OR2M5 WILD-TYPE 
             16             562 
  OR2M5 MUTATED OR2M5 WILD-TYPE 
             16             562 
[1] "RANBP3 MUTATION ANALYSIS"
[1] 3
  RANBP3 MUTATED RANBP3 WILD-TYPE 
              14              564 
  RANBP3 MUTATED RANBP3 WILD-TYPE 
              14              564 
[1] "PLK1 MUTATION ANALYSIS"
[1] 3
  PLK1 MUTATED PLK1 WILD-TYPE 
            18            560 
  PLK1 MUTATED PLK1 WILD-TYPE 
            18            560 
[1] "BRPF3 MUTATION ANALYSIS"
[1] 3
  BRPF3 MUTATED BRPF3 WILD-TYPE 
             13             565 
  BRPF3 MUTATED BRPF3 WILD-TYPE 
             13             565 
[1] "CSNK1G3 MUTATION ANALYSIS"
[1] 3
  CSNK1G3 MUTATED CSNK1G3 WILD-TYPE 
                9               569 
  CSNK1G3 MUTATED CSNK1G3 WILD-TYPE 
                9               569 
[1] "STX12 MUTATION ANALYSIS"
[1] 3
  STX12 MUTATED STX12 WILD-TYPE 
              4             574 
  STX12 MUTATED STX12 WILD-TYPE 
              4             574 
[1] "KRTAP10-9 MUTATION ANALYSIS"
[1] 3
  KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE 
                  9                 569 
  KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE 
                  9                 569 
[1] "LOXL2 MUTATION ANALYSIS"
[1] 3
  LOXL2 MUTATED LOXL2 WILD-TYPE 
             18             560 
  LOXL2 MUTATED LOXL2 WILD-TYPE 
             18             560 
[1] "SLC25A41 MUTATION ANALYSIS"
[1] 3
  SLC25A41 MUTATED SLC25A41 WILD-TYPE 
                 6                572 
  SLC25A41 MUTATED SLC25A41 WILD-TYPE 
                 6                572 
[1] "MAP9 MUTATION ANALYSIS"
[1] 3
  MAP9 MUTATED MAP9 WILD-TYPE 
            14            564 
  MAP9 MUTATED MAP9 WILD-TYPE 
            14            564 
[1] "SLC9A2 MUTATION ANALYSIS"
[1] 3
  SLC9A2 MUTATED SLC9A2 WILD-TYPE 
              15              563 
  SLC9A2 MUTATED SLC9A2 WILD-TYPE 
              15              563 
[1] "SEC31B MUTATION ANALYSIS"
[1] 3
  SEC31B MUTATED SEC31B WILD-TYPE 
              22              556 
  SEC31B MUTATED SEC31B WILD-TYPE 
              22              556 
[1] "MINA MUTATION ANALYSIS"
[1] 3
  MINA MUTATED MINA WILD-TYPE 
             8            570 
  MINA MUTATED MINA WILD-TYPE 
             8            570 
[1] "CAB39L MUTATION ANALYSIS"
[1] 3
  CAB39L MUTATED CAB39L WILD-TYPE 
               8              570 
  CAB39L MUTATED CAB39L WILD-TYPE 
               8              570 
[1] "GPR137B MUTATION ANALYSIS"
[1] 3
  GPR137B MUTATED GPR137B WILD-TYPE 
                8               570 
  GPR137B MUTATED GPR137B WILD-TYPE 
                8               570 
[1] "IL1F7 MUTATION ANALYSIS"
[1] 3
  IL1F7 MUTATED IL1F7 WILD-TYPE 
              4             574 
  IL1F7 MUTATED IL1F7 WILD-TYPE 
              4             574 
[1] "TM7SF3 MUTATION ANALYSIS"
[1] 3
  TM7SF3 MUTATED TM7SF3 WILD-TYPE 
               7              571 
  TM7SF3 MUTATED TM7SF3 WILD-TYPE 
               7              571 
[1] "TTK MUTATION ANALYSIS"
[1] 3
  TTK MUTATED TTK WILD-TYPE 
           22           556 
  TTK MUTATED TTK WILD-TYPE 
           22           556 
[1] "SLFN13 MUTATION ANALYSIS"
[1] 3
  SLFN13 MUTATED SLFN13 WILD-TYPE 
              10              568 
  SLFN13 MUTATED SLFN13 WILD-TYPE 
              10              568 
[1] "RBBP8 MUTATION ANALYSIS"
[1] 3
  RBBP8 MUTATED RBBP8 WILD-TYPE 
              8             570 
  RBBP8 MUTATED RBBP8 WILD-TYPE 
              8             570 
[1] "SPANXC MUTATION ANALYSIS"
[1] 3
  SPANXC MUTATED SPANXC WILD-TYPE 
              11              567 
  SPANXC MUTATED SPANXC WILD-TYPE 
              11              567 
[1] "MSL3 MUTATION ANALYSIS"
[1] 3
  MSL3 MUTATED MSL3 WILD-TYPE 
             9            569 
  MSL3 MUTATED MSL3 WILD-TYPE 
             9            569 
[1] "EGLN1 MUTATION ANALYSIS"
[1] 3
  EGLN1 MUTATED EGLN1 WILD-TYPE 
              6             572 
  EGLN1 MUTATED EGLN1 WILD-TYPE 
              6             572 
[1] "ARNT MUTATION ANALYSIS"
[1] 3
  ARNT MUTATED ARNT WILD-TYPE 
             8            570 
  ARNT MUTATED ARNT WILD-TYPE 
             8            570 
[1] "SCN9A MUTATION ANALYSIS"
[1] 3
  SCN9A MUTATED SCN9A WILD-TYPE 
             43             535 
  SCN9A MUTATED SCN9A WILD-TYPE 
             43             535 
[1] "AMHR2 MUTATION ANALYSIS"
[1] 3
  AMHR2 MUTATED AMHR2 WILD-TYPE 
             10             568 
  AMHR2 MUTATED AMHR2 WILD-TYPE 
             10             568 
[1] "BRCA1 MUTATION ANALYSIS"
[1] 3
  BRCA1 MUTATED BRCA1 WILD-TYPE 
             21             557 
  BRCA1 MUTATED BRCA1 WILD-TYPE 
             21             557 
[1] "AMICA1 MUTATION ANALYSIS"
[1] 3
  AMICA1 MUTATED AMICA1 WILD-TYPE 
               8              570 
  AMICA1 MUTATED AMICA1 WILD-TYPE 
               8              570 
[1] "OXCT2 MUTATION ANALYSIS"
[1] 3
  OXCT2 MUTATED OXCT2 WILD-TYPE 
              6             572 
  OXCT2 MUTATED OXCT2 WILD-TYPE 
              6             572 
[1] "WWC1 MUTATION ANALYSIS"
[1] 3
  WWC1 MUTATED WWC1 WILD-TYPE 
            20            558 
  WWC1 MUTATED WWC1 WILD-TYPE 
            20            558 
[1] "ATF5 MUTATION ANALYSIS"
[1] 3
  ATF5 MUTATED ATF5 WILD-TYPE 
             5            573 
  ATF5 MUTATED ATF5 WILD-TYPE 
             5            573 
[1] "EP300 MUTATION ANALYSIS"
[1] 3
  EP300 MUTATED EP300 WILD-TYPE 
             36             542 
  EP300 MUTATED EP300 WILD-TYPE 
             36             542 
[1] "DLD MUTATION ANALYSIS"
[1] 3
  DLD MUTATED DLD WILD-TYPE 
           14           564 
  DLD MUTATED DLD WILD-TYPE 
           14           564 
[1] "BIRC3 MUTATION ANALYSIS"
[1] 3
  BIRC3 MUTATED BIRC3 WILD-TYPE 
             12             566 
  BIRC3 MUTATED BIRC3 WILD-TYPE 
             12             566 
[1] "NOS1 MUTATION ANALYSIS"
[1] 3
  NOS1 MUTATED NOS1 WILD-TYPE 
            37            541 
  NOS1 MUTATED NOS1 WILD-TYPE 
            37            541 
[1] "NOTCH1 MUTATION ANALYSIS"
[1] 3
  NOTCH1 MUTATED NOTCH1 WILD-TYPE 
              45              533 
  NOTCH1 MUTATED NOTCH1 WILD-TYPE 
              45              533 
[1] "C16ORF7 MUTATION ANALYSIS"
[1] 3
  C16ORF7 MUTATED C16ORF7 WILD-TYPE 
               16               562 
  C16ORF7 MUTATED C16ORF7 WILD-TYPE 
               16               562 
[1] "HIVEP3 MUTATION ANALYSIS"
[1] 3
  HIVEP3 MUTATED HIVEP3 WILD-TYPE 
              36              542 
  HIVEP3 MUTATED HIVEP3 WILD-TYPE 
              36              542 
[1] "FBXO32 MUTATION ANALYSIS"
[1] 3
  FBXO32 MUTATED FBXO32 WILD-TYPE 
               7              571 
  FBXO32 MUTATED FBXO32 WILD-TYPE 
               7              571 
[1] "BIRC7 MUTATION ANALYSIS"
[1] 3
  BIRC7 MUTATED BIRC7 WILD-TYPE 
              6             572 
  BIRC7 MUTATED BIRC7 WILD-TYPE 
              6             572 
[1] "AFP MUTATION ANALYSIS"
[1] 3
  AFP MUTATED AFP WILD-TYPE 
            4           574 
  AFP MUTATED AFP WILD-TYPE 
            4           574 
[1] "COL11A1 MUTATION ANALYSIS"
[1] 3
  COL11A1 MUTATED COL11A1 WILD-TYPE 
               61               517 
  COL11A1 MUTATED COL11A1 WILD-TYPE 
               61               517 
[1] "FAM166B MUTATION ANALYSIS"
[1] 3
  FAM166B MUTATED FAM166B WILD-TYPE 
                9               569 
  FAM166B MUTATED FAM166B WILD-TYPE 
                9               569 
[1] "ARHGEF17 MUTATION ANALYSIS"
[1] 3
  ARHGEF17 MUTATED ARHGEF17 WILD-TYPE 
                25                553 
  ARHGEF17 MUTATED ARHGEF17 WILD-TYPE 
                25                553 
[1] "RRBP1 MUTATION ANALYSIS"
[1] 3
  RRBP1 MUTATED RRBP1 WILD-TYPE 
             20             558 
  RRBP1 MUTATED RRBP1 WILD-TYPE 
             20             558 
[1] "PROK2 MUTATION ANALYSIS"
[1] 3
  PROK2 MUTATED PROK2 WILD-TYPE 
              4             574 
  PROK2 MUTATED PROK2 WILD-TYPE 
              4             574 
[1] "GIGYF2 MUTATION ANALYSIS"
[1] 3
  GIGYF2 MUTATED GIGYF2 WILD-TYPE 
              19              559 
  GIGYF2 MUTATED GIGYF2 WILD-TYPE 
              19              559 
[1] "PSMC4 MUTATION ANALYSIS"
[1] 3
  PSMC4 MUTATED PSMC4 WILD-TYPE 
             16             562 
  PSMC4 MUTATED PSMC4 WILD-TYPE 
             16             562 
[1] "ITGB8 MUTATION ANALYSIS"
[1] 3
  ITGB8 MUTATED ITGB8 WILD-TYPE 
             15             563 
  ITGB8 MUTATED ITGB8 WILD-TYPE 
             15             563 
[1] "ARHGEF5 MUTATION ANALYSIS"
[1] 3
  ARHGEF5 MUTATED ARHGEF5 WILD-TYPE 
                8               570 
  ARHGEF5 MUTATED ARHGEF5 WILD-TYPE 
                8               570 
[1] "INVS MUTATION ANALYSIS"
[1] 3
  INVS MUTATED INVS WILD-TYPE 
            23            555 
  INVS MUTATED INVS WILD-TYPE 
            23            555 
[1] "E2F5 MUTATION ANALYSIS"
[1] 3
  E2F5 MUTATED E2F5 WILD-TYPE 
             5            573 
  E2F5 MUTATED E2F5 WILD-TYPE 
             5            573 
[1] "MKI67IP MUTATION ANALYSIS"
[1] 3
  MKI67IP MUTATED MKI67IP WILD-TYPE 
                9               569 
  MKI67IP MUTATED MKI67IP WILD-TYPE 
                9               569 
[1] "TMEM63A MUTATION ANALYSIS"
[1] 3
  TMEM63A MUTATED TMEM63A WILD-TYPE 
               15               563 
  TMEM63A MUTATED TMEM63A WILD-TYPE 
               15               563 
[1] "ZCCHC2 MUTATION ANALYSIS"
[1] 3
  ZCCHC2 MUTATED ZCCHC2 WILD-TYPE 
               8              570 
  ZCCHC2 MUTATED ZCCHC2 WILD-TYPE 
               8              570 
[1] "EPHB6 MUTATION ANALYSIS"
[1] 3
  EPHB6 MUTATED EPHB6 WILD-TYPE 
             22             556 
  EPHB6 MUTATED EPHB6 WILD-TYPE 
             22             556 
[1] "GPR1 MUTATION ANALYSIS"
[1] 3
  GPR1 MUTATED GPR1 WILD-TYPE 
             7            571 
  GPR1 MUTATED GPR1 WILD-TYPE 
             7            571 
[1] "PCDHGC3 MUTATION ANALYSIS"
[1] 3
  PCDHGC3 MUTATED PCDHGC3 WILD-TYPE 
               15               563 
  PCDHGC3 MUTATED PCDHGC3 WILD-TYPE 
               15               563 
[1] "CACNA1H MUTATION ANALYSIS"
[1] 3
  CACNA1H MUTATED CACNA1H WILD-TYPE 
               40               538 
  CACNA1H MUTATED CACNA1H WILD-TYPE 
               40               538 
[1] "RPS6KA5 MUTATION ANALYSIS"
[1] 3
  RPS6KA5 MUTATED RPS6KA5 WILD-TYPE 
                9               569 
  RPS6KA5 MUTATED RPS6KA5 WILD-TYPE 
                9               569 
[1] "NAGPA MUTATION ANALYSIS"
[1] 3
  NAGPA MUTATED NAGPA WILD-TYPE 
              9             569 
  NAGPA MUTATED NAGPA WILD-TYPE 
              9             569 
[1] "KCNJ6 MUTATION ANALYSIS"
[1] 3
  KCNJ6 MUTATED KCNJ6 WILD-TYPE 
             12             566 
  KCNJ6 MUTATED KCNJ6 WILD-TYPE 
             12             566 
[1] "PIGZ MUTATION ANALYSIS"
[1] 3
  PIGZ MUTATED PIGZ WILD-TYPE 
            10            568 
  PIGZ MUTATED PIGZ WILD-TYPE 
            10            568 
[1] "DBF4 MUTATION ANALYSIS"
[1] 3
  DBF4 MUTATED DBF4 WILD-TYPE 
             9            569 
  DBF4 MUTATED DBF4 WILD-TYPE 
             9            569 
[1] "DOK7 MUTATION ANALYSIS"
[1] 3
  DOK7 MUTATED DOK7 WILD-TYPE 
             7            571 
  DOK7 MUTATED DOK7 WILD-TYPE 
             7            571 
[1] "HECA MUTATION ANALYSIS"
[1] 3
  HECA MUTATED HECA WILD-TYPE 
            19            559 
  HECA MUTATED HECA WILD-TYPE 
            19            559 
[1] "IGBP1 MUTATION ANALYSIS"
[1] 3
  IGBP1 MUTATED IGBP1 WILD-TYPE 
              6             572 
  IGBP1 MUTATED IGBP1 WILD-TYPE 
              6             572 
[1] "INSM2 MUTATION ANALYSIS"
[1] 3
  INSM2 MUTATED INSM2 WILD-TYPE 
             13             565 
  INSM2 MUTATED INSM2 WILD-TYPE 
             13             565 
[1] "SAE1 MUTATION ANALYSIS"
[1] 3
  SAE1 MUTATED SAE1 WILD-TYPE 
             6            572 
  SAE1 MUTATED SAE1 WILD-TYPE 
             6            572 
[1] "SUCLG2 MUTATION ANALYSIS"
[1] 3
  SUCLG2 MUTATED SUCLG2 WILD-TYPE 
               8              570 
  SUCLG2 MUTATED SUCLG2 WILD-TYPE 
               8              570 
[1] "CDC6 MUTATION ANALYSIS"
[1] 3
  CDC6 MUTATED CDC6 WILD-TYPE 
            13            565 
  CDC6 MUTATED CDC6 WILD-TYPE 
            13            565 
[1] "CUL5 MUTATION ANALYSIS"
[1] 3
  CUL5 MUTATED CUL5 WILD-TYPE 
            15            563 
  CUL5 MUTATED CUL5 WILD-TYPE 
            15            563 
[1] "SERPINB8 MUTATION ANALYSIS"
[1] 3
  SERPINB8 MUTATED SERPINB8 WILD-TYPE 
                 8                570 
  SERPINB8 MUTATED SERPINB8 WILD-TYPE 
                 8                570 
[1] "HSP90AB1 MUTATION ANALYSIS"
[1] 3
  HSP90AB1 MUTATED HSP90AB1 WILD-TYPE 
                13                565 
  HSP90AB1 MUTATED HSP90AB1 WILD-TYPE 
                13                565 
[1] "SMARCA4 MUTATION ANALYSIS"
[1] 3
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
               38               540 
  SMARCA4 MUTATED SMARCA4 WILD-TYPE 
               38               540 
[1] "SETD2 MUTATION ANALYSIS"
[1] 3
  SETD2 MUTATED SETD2 WILD-TYPE 
             24             554 
  SETD2 MUTATED SETD2 WILD-TYPE 
             24             554 
[1] "ZC3H8 MUTATION ANALYSIS"
[1] 3
  ZC3H8 MUTATED ZC3H8 WILD-TYPE 
              5             573 
  ZC3H8 MUTATED ZC3H8 WILD-TYPE 
              5             573 
[1] "NARG2 MUTATION ANALYSIS"
[1] 3
  NARG2 MUTATED NARG2 WILD-TYPE 
             14             564 
  NARG2 MUTATED NARG2 WILD-TYPE 
             14             564 
[1] "C3ORF33 MUTATION ANALYSIS"
[1] 3
  C3ORF33 MUTATED C3ORF33 WILD-TYPE 
                8               570 
  C3ORF33 MUTATED C3ORF33 WILD-TYPE 
                8               570 
[1] "ZNF2 MUTATION ANALYSIS"
[1] 3
  ZNF2 MUTATED ZNF2 WILD-TYPE 
             9            569 
  ZNF2 MUTATED ZNF2 WILD-TYPE 
             9            569 
[1] "ETV1 MUTATION ANALYSIS"
[1] 3
  ETV1 MUTATED ETV1 WILD-TYPE 
             9            569 
  ETV1 MUTATED ETV1 WILD-TYPE 
             9            569 
[1] "TAF6 MUTATION ANALYSIS"
[1] 3
  TAF6 MUTATED TAF6 WILD-TYPE 
            15            563 
  TAF6 MUTATED TAF6 WILD-TYPE 
            15            563 
[1] "BCL2L2 MUTATION ANALYSIS"
[1] 3
  BCL2L2 MUTATED BCL2L2 WILD-TYPE 
               5              573 
  BCL2L2 MUTATED BCL2L2 WILD-TYPE 
               5              573 
[1] "SPTLC3 MUTATION ANALYSIS"
[1] 3
  SPTLC3 MUTATED SPTLC3 WILD-TYPE 
              15              563 
  SPTLC3 MUTATED SPTLC3 WILD-TYPE 
              15              563 
[1] "PPRC1 MUTATION ANALYSIS"
[1] 3
  PPRC1 MUTATED PPRC1 WILD-TYPE 
             20             558 
  PPRC1 MUTATED PPRC1 WILD-TYPE 
             20             558 
[1] "KCNT2 MUTATION ANALYSIS"
[1] 3
  KCNT2 MUTATED KCNT2 WILD-TYPE 
             41             537 
  KCNT2 MUTATED KCNT2 WILD-TYPE 
             41             537 
[1] "CLSTN1 MUTATION ANALYSIS"
[1] 3
  CLSTN1 MUTATED CLSTN1 WILD-TYPE 
              14              564 
  CLSTN1 MUTATED CLSTN1 WILD-TYPE 
              14              564 
[1] "PCDH19 MUTATION ANALYSIS"
[1] 3
  PCDH19 MUTATED PCDH19 WILD-TYPE 
              30              548 
  PCDH19 MUTATED PCDH19 WILD-TYPE 
              30              548 
[1] "LRRC4 MUTATION ANALYSIS"
[1] 3
  LRRC4 MUTATED LRRC4 WILD-TYPE 
             22             556 
  LRRC4 MUTATED LRRC4 WILD-TYPE 
             22             556 
[1] "THYN1 MUTATION ANALYSIS"
[1] 3
  THYN1 MUTATED THYN1 WILD-TYPE 
             10             568 
  THYN1 MUTATED THYN1 WILD-TYPE 
             10             568 
[1] "BZW1 MUTATION ANALYSIS"
[1] 3
  BZW1 MUTATED BZW1 WILD-TYPE 
             9            569 
  BZW1 MUTATED BZW1 WILD-TYPE 
             9            569 
[1] "CEP110 MUTATION ANALYSIS"
[1] 3
  CEP110 MUTATED CEP110 WILD-TYPE 
              19              559 
  CEP110 MUTATED CEP110 WILD-TYPE 
              19              559 
[1] "UACA MUTATION ANALYSIS"
[1] 3
  UACA MUTATED UACA WILD-TYPE 
            17            561 
  UACA MUTATED UACA WILD-TYPE 
            17            561 
[1] "PAPOLB MUTATION ANALYSIS"
[1] 3
  PAPOLB MUTATED PAPOLB WILD-TYPE 
              15              563 
  PAPOLB MUTATED PAPOLB WILD-TYPE 
              15              563 
[1] "TBC1D22B MUTATION ANALYSIS"
[1] 3
  TBC1D22B MUTATED TBC1D22B WILD-TYPE 
                 9                569 
  TBC1D22B MUTATED TBC1D22B WILD-TYPE 
                 9                569 
[1] "HTR1E MUTATION ANALYSIS"
[1] 3
  HTR1E MUTATED HTR1E WILD-TYPE 
             17             561 
  HTR1E MUTATED HTR1E WILD-TYPE 
             17             561 
[1] "SALL2 MUTATION ANALYSIS"
[1] 3
  SALL2 MUTATED SALL2 WILD-TYPE 
             16             562 
  SALL2 MUTATED SALL2 WILD-TYPE 
             16             562 
[1] "BTAF1 MUTATION ANALYSIS"
[1] 3
  BTAF1 MUTATED BTAF1 WILD-TYPE 
             25             553 
  BTAF1 MUTATED BTAF1 WILD-TYPE 
             25             553 
[1] "ARV1 MUTATION ANALYSIS"
[1] 3
  ARV1 MUTATED ARV1 WILD-TYPE 
             7            571 
  ARV1 MUTATED ARV1 WILD-TYPE 
             7            571 
[1] "DOPEY2 MUTATION ANALYSIS"
[1] 3
  DOPEY2 MUTATED DOPEY2 WILD-TYPE 
              35              543 
  DOPEY2 MUTATED DOPEY2 WILD-TYPE 
              35              543 
[1] "ZNF800 MUTATION ANALYSIS"
[1] 3
  ZNF800 MUTATED ZNF800 WILD-TYPE 
              14              564 
  ZNF800 MUTATED ZNF800 WILD-TYPE 
              14              564 
[1] "SRPK3 MUTATION ANALYSIS"
[1] 3
  SRPK3 MUTATED SRPK3 WILD-TYPE 
             13             565 
  SRPK3 MUTATED SRPK3 WILD-TYPE 
             13             565 
[1] "CIB3 MUTATION ANALYSIS"
[1] 3
  CIB3 MUTATED CIB3 WILD-TYPE 
             5            573 
  CIB3 MUTATED CIB3 WILD-TYPE 
             5            573 
[1] "PDK3 MUTATION ANALYSIS"
[1] 3
  PDK3 MUTATED PDK3 WILD-TYPE 
             8            570 
  PDK3 MUTATED PDK3 WILD-TYPE 
             8            570 
[1] "NRIP3 MUTATION ANALYSIS"
[1] 3
  NRIP3 MUTATED NRIP3 WILD-TYPE 
              7             571 
  NRIP3 MUTATED NRIP3 WILD-TYPE 
              7             571 
[1] "ZKSCAN3 MUTATION ANALYSIS"
[1] 3
  ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE 
               13               565 
  ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE 
               13               565 
[1] "ZNF167 MUTATION ANALYSIS"
[1] 3
  ZNF167 MUTATED ZNF167 WILD-TYPE 
              15              563 
  ZNF167 MUTATED ZNF167 WILD-TYPE 
              15              563 
[1] "ABCA5 MUTATION ANALYSIS"
[1] 3
  ABCA5 MUTATED ABCA5 WILD-TYPE 
             23             555 
  ABCA5 MUTATED ABCA5 WILD-TYPE 
             23             555 
[1] "PPM1D MUTATION ANALYSIS"
[1] 3
  PPM1D MUTATED PPM1D WILD-TYPE 
             10             568 
  PPM1D MUTATED PPM1D WILD-TYPE 
             10             568 
[1] "CSNK1G1 MUTATION ANALYSIS"
[1] 3
  CSNK1G1 MUTATED CSNK1G1 WILD-TYPE 
                7               571 
  CSNK1G1 MUTATED CSNK1G1 WILD-TYPE 
                7               571 
[1] "TMC2 MUTATION ANALYSIS"
[1] 3
  TMC2 MUTATED TMC2 WILD-TYPE 
            19            559 
  TMC2 MUTATED TMC2 WILD-TYPE 
            19            559 
[1] "XRCC5 MUTATION ANALYSIS"
[1] 3
  XRCC5 MUTATED XRCC5 WILD-TYPE 
             13             565 
  XRCC5 MUTATED XRCC5 WILD-TYPE 
             13             565 
[1] "ZNF828 MUTATION ANALYSIS"
[1] 3
  ZNF828 MUTATED ZNF828 WILD-TYPE 
              12              566 
  ZNF828 MUTATED ZNF828 WILD-TYPE 
              12              566 
[1] "CHST4 MUTATION ANALYSIS"
[1] 3
  CHST4 MUTATED CHST4 WILD-TYPE 
              7             571 
  CHST4 MUTATED CHST4 WILD-TYPE 
              7             571 
[1] "SMARCC2 MUTATION ANALYSIS"
[1] 3
  SMARCC2 MUTATED SMARCC2 WILD-TYPE 
               22               556 
  SMARCC2 MUTATED SMARCC2 WILD-TYPE 
               22               556 
[1] "ZNF98 MUTATION ANALYSIS"
[1] 3
  ZNF98 MUTATED ZNF98 WILD-TYPE 
             18             560 
  ZNF98 MUTATED ZNF98 WILD-TYPE 
             18             560 
[1] "RGS22 MUTATION ANALYSIS"
[1] 3
  RGS22 MUTATED RGS22 WILD-TYPE 
             23             555 
  RGS22 MUTATED RGS22 WILD-TYPE 
             23             555 
[1] "ATOH1 MUTATION ANALYSIS"
[1] 3
  ATOH1 MUTATED ATOH1 WILD-TYPE 
              6             572 
  ATOH1 MUTATED ATOH1 WILD-TYPE 
              6             572 
[1] "RBM33 MUTATION ANALYSIS"
[1] 3
  RBM33 MUTATED RBM33 WILD-TYPE 
             21             557 
  RBM33 MUTATED RBM33 WILD-TYPE 
             21             557 
[1] "SLC22A16 MUTATION ANALYSIS"
[1] 3
  SLC22A16 MUTATED SLC22A16 WILD-TYPE 
                12                566 
  SLC22A16 MUTATED SLC22A16 WILD-TYPE 
                12                566 
[1] "SMAD2 MUTATION ANALYSIS"
[1] 3
  SMAD2 MUTATED SMAD2 WILD-TYPE 
             11             567 
  SMAD2 MUTATED SMAD2 WILD-TYPE 
             11             567 
[1] "FIGNL1 MUTATION ANALYSIS"
[1] 3
  FIGNL1 MUTATED FIGNL1 WILD-TYPE 
              12              566 
  FIGNL1 MUTATED FIGNL1 WILD-TYPE 
              12              566 
[1] "KDELR2 MUTATION ANALYSIS"
[1] 3
  KDELR2 MUTATED KDELR2 WILD-TYPE 
               5              573 
  KDELR2 MUTATED KDELR2 WILD-TYPE 
               5              573 
[1] "NOLC1 MUTATION ANALYSIS"
[1] 3
  NOLC1 MUTATED NOLC1 WILD-TYPE 
             15             563 
  NOLC1 MUTATED NOLC1 WILD-TYPE 
             15             563 
[1] "NF1 MUTATION ANALYSIS"
[1] 3
  NF1 MUTATED NF1 WILD-TYPE 
           35           543 
  NF1 MUTATED NF1 WILD-TYPE 
           35           543 
[1] "GSDMB MUTATION ANALYSIS"
[1] 3
  GSDMB MUTATED GSDMB WILD-TYPE 
              5             573 
  GSDMB MUTATED GSDMB WILD-TYPE 
              5             573 
[1] "PPP1R12C MUTATION ANALYSIS"
[1] 3
  PPP1R12C MUTATED PPP1R12C WILD-TYPE 
                11                567 
  PPP1R12C MUTATED PPP1R12C WILD-TYPE 
                11                567 
[1] "PELI2 MUTATION ANALYSIS"
[1] 3
  PELI2 MUTATED PELI2 WILD-TYPE 
             11             567 
  PELI2 MUTATED PELI2 WILD-TYPE 
             11             567 
[1] "UNC93B1 MUTATION ANALYSIS"
[1] 3
  UNC93B1 MUTATED UNC93B1 WILD-TYPE 
                9               569 
  UNC93B1 MUTATED UNC93B1 WILD-TYPE 
                9               569 
[1] "PRKCD MUTATION ANALYSIS"
[1] 3
  PRKCD MUTATED PRKCD WILD-TYPE 
             12             566 
  PRKCD MUTATED PRKCD WILD-TYPE 
             12             566 
[1] "TESK1 MUTATION ANALYSIS"
[1] 3
  TESK1 MUTATED TESK1 WILD-TYPE 
             13             565 
  TESK1 MUTATED TESK1 WILD-TYPE 
             13             565 
[1] "GLTPD1 MUTATION ANALYSIS"
[1] 3
  GLTPD1 MUTATED GLTPD1 WILD-TYPE 
               4              574 
  GLTPD1 MUTATED GLTPD1 WILD-TYPE 
               4              574 
[1] "ST8SIA6 MUTATION ANALYSIS"
[1] 3
  ST8SIA6 MUTATED ST8SIA6 WILD-TYPE 
               10               568 
  ST8SIA6 MUTATED ST8SIA6 WILD-TYPE 
               10               568 
[1] "ATP11B MUTATION ANALYSIS"
[1] 3
  ATP11B MUTATED ATP11B WILD-TYPE 
              13              565 
  ATP11B MUTATED ATP11B WILD-TYPE 
              13              565 
[1] "SRP68 MUTATION ANALYSIS"
[1] 3
  SRP68 MUTATED SRP68 WILD-TYPE 
              8             570 
  SRP68 MUTATED SRP68 WILD-TYPE 
              8             570 
[1] "ABCD1 MUTATION ANALYSIS"
[1] 3
  ABCD1 MUTATED ABCD1 WILD-TYPE 
             10             568 
  ABCD1 MUTATED ABCD1 WILD-TYPE 
             10             568 
[1] "MCTP1 MUTATION ANALYSIS"
[1] 3
  MCTP1 MUTATED MCTP1 WILD-TYPE 
             10             568 
  MCTP1 MUTATED MCTP1 WILD-TYPE 
             10             568 
[1] "TCERG1 MUTATION ANALYSIS"
[1] 3
  TCERG1 MUTATED TCERG1 WILD-TYPE 
              12              566 
  TCERG1 MUTATED TCERG1 WILD-TYPE 
              12              566 
[1] "SETBP1 MUTATION ANALYSIS"
[1] 3
  SETBP1 MUTATED SETBP1 WILD-TYPE 
              47              531 
  SETBP1 MUTATED SETBP1 WILD-TYPE 
              47              531 
[1] "WEE1 MUTATION ANALYSIS"
[1] 3
  WEE1 MUTATED WEE1 WILD-TYPE 
             7            571 
  WEE1 MUTATED WEE1 WILD-TYPE 
             7            571 
[1] "IGSF21 MUTATION ANALYSIS"
[1] 3
  IGSF21 MUTATED IGSF21 WILD-TYPE 
               5              573 
  IGSF21 MUTATED IGSF21 WILD-TYPE 
               5              573 
[1] "IBTK MUTATION ANALYSIS"
[1] 3
  IBTK MUTATED IBTK WILD-TYPE 
            23            555 
  IBTK MUTATED IBTK WILD-TYPE 
            23            555 
[1] "EEA1 MUTATION ANALYSIS"
[1] 3
  EEA1 MUTATED EEA1 WILD-TYPE 
            16            562 
  EEA1 MUTATED EEA1 WILD-TYPE 
            16            562 
[1] "PBX2 MUTATION ANALYSIS"
[1] 3
  PBX2 MUTATED PBX2 WILD-TYPE 
            11            567 
  PBX2 MUTATED PBX2 WILD-TYPE 
            11            567 
[1] "C2ORF67 MUTATION ANALYSIS"
[1] 3
  C2ORF67 MUTATED C2ORF67 WILD-TYPE 
               18               560 
  C2ORF67 MUTATED C2ORF67 WILD-TYPE 
               18               560 
[1] "ZNF740 MUTATION ANALYSIS"
[1] 3
  ZNF740 MUTATED ZNF740 WILD-TYPE 
               3              575 
  ZNF740 MUTATED ZNF740 WILD-TYPE 
               3              575 
[1] "SLA MUTATION ANALYSIS"
[1] 3
  SLA MUTATED SLA WILD-TYPE 
            9           569 
  SLA MUTATED SLA WILD-TYPE 
            9           569 
[1] "CC2D2A MUTATION ANALYSIS"
[1] 3
  CC2D2A MUTATED CC2D2A WILD-TYPE 
              17              561 
  CC2D2A MUTATED CC2D2A WILD-TYPE 
              17              561 
[1] "GZF1 MUTATION ANALYSIS"
[1] 3
  GZF1 MUTATED GZF1 WILD-TYPE 
            21            557 
  GZF1 MUTATED GZF1 WILD-TYPE 
            21            557 
[1] "AGXT2L1 MUTATION ANALYSIS"
[1] 3
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
               10               568 
  AGXT2L1 MUTATED AGXT2L1 WILD-TYPE 
               10               568 
[1] "EPN1 MUTATION ANALYSIS"
[1] 3
  EPN1 MUTATED EPN1 WILD-TYPE 
            12            566 
  EPN1 MUTATED EPN1 WILD-TYPE 
            12            566 
[1] "CCT6A MUTATION ANALYSIS"
[1] 3
  CCT6A MUTATED CCT6A WILD-TYPE 
              9             569 
  CCT6A MUTATED CCT6A WILD-TYPE 
              9             569 
[1] "PJA1 MUTATION ANALYSIS"
[1] 3
  PJA1 MUTATED PJA1 WILD-TYPE 
            13            565 
  PJA1 MUTATED PJA1 WILD-TYPE 
            13            565 
[1] "GALK1 MUTATION ANALYSIS"
[1] 3
  GALK1 MUTATED GALK1 WILD-TYPE 
              4             574 
  GALK1 MUTATED GALK1 WILD-TYPE 
              4             574 
[1] "PEG3 MUTATION ANALYSIS"
[1] 3
  PEG3 MUTATED PEG3 WILD-TYPE 
            43            535 
  PEG3 MUTATED PEG3 WILD-TYPE 
            43            535 
[1] "GPR120 MUTATION ANALYSIS"
[1] 3
  GPR120 MUTATED GPR120 WILD-TYPE 
               7              571 
  GPR120 MUTATED GPR120 WILD-TYPE 
               7              571 
[1] "RRP7A MUTATION ANALYSIS"
[1] 3
  RRP7A MUTATED RRP7A WILD-TYPE 
              5             573 
  RRP7A MUTATED RRP7A WILD-TYPE 
              5             573 
[1] "ARID5B MUTATION ANALYSIS"
[1] 3
  ARID5B MUTATED ARID5B WILD-TYPE 
              18              560 
  ARID5B MUTATED ARID5B WILD-TYPE 
              18              560 
[1] "data2feature, selection=ALL"
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"

Input Data has 10 rows and 578 columns.

Variable 1:'CN_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 2:'METHLYATION_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 3:'RPPA_CNMF':	nDistinctValues=4,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 4:'RPPA_CHIERARCHICAL':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 5:'MRNASEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 6:'MRNASEQ_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 7:'MIRSEQ_CNMF':	nDistinctValues=3,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 8:'MIRSEQ_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 9:'MIRSEQ_MATURE_CNMF':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
Variable 10:'MIRSEQ_MATURE_CHIERARCHICAL':	nDistinctValues=5,	numeric=FALSE,	binary=FALSE,	exclude=FALSE.
[1] "## **** detect survival parameters (defined in index such as ind_OS, ind_MFS, ind_RFS, ind_RFS, ind_BCR and ind_d2ssd) *** ##"
[1] "detected survival parameters using [ind_OS, overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_OS, curated_overall_survival]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_TCGAOS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survivial parameters using [ind_MFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_RFS]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_BCR]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [ind_Progression]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using [index_additional_survival_time]"
[1] "survival parameters accumulated so far"
NULL
[1] "detected survival parameters using condition: [is.null(surv.mat)&&(selection=='SURV')]"
[1] "survival parameters accumulated so far"
NULL
[1] "************ conversion from categorical data to rank data ********** "
[1] "****** SUMMARY ***** "
Output Data has 578 columns, 0 survival variables, and 10 non-survival variables.
[1] "* survival variables: "
NULL
[1] "* non-survival variables: "
 [1] "CN_CNMF"                     "METHLYATION_CNMF"           
 [3] "RPPA_CNMF"                   "RPPA_CHIERARCHICAL"         
 [5] "MRNASEQ_CNMF"                "MRNASEQ_CHIERARCHICAL"      
 [7] "MIRSEQ_CNMF"                 "MIRSEQ_CHIERARCHICAL"       
 [9] "MIRSEQ_MATURE_CNMF"          "MIRSEQ_MATURE_CHIERARCHICAL"
CN_CNMF, nv=4, binary=FALSE, numeric=FALSE
METHLYATION_CNMF, nv=3, binary=FALSE, numeric=FALSE
RPPA_CNMF, nv=4, binary=FALSE, numeric=FALSE
RPPA_CHIERARCHICAL, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MRNASEQ_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_CNMF, nv=3, binary=FALSE, numeric=FALSE
MIRSEQ_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CNMF, nv=5, binary=FALSE, numeric=FALSE
MIRSEQ_MATURE_CHIERARCHICAL, nv=5, binary=FALSE, numeric=FALSE

Clustering(1) Variable = TP53 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       92     69    137     40
  TP53 WILD-TYPE     43     23     35    136
D1V1, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           92             43
  CLUS_2           69             23
  CLUS_3          137             35
  CLUS_4           40            136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      126    132     64
  TP53 WILD-TYPE     89     23     98
D1V2, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          126             89
  CLUS_2          132             23
  CLUS_3           64             98
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53 MUTATED       81     71     70     40
  TP53 WILD-TYPE     54     53     55     20
D1V3, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           81             54
  CLUS_2           71             53
  CLUS_3           70             55
  CLUS_4           40             20
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      159     55     48
  TP53 WILD-TYPE     94     47     41
D1V4, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          159             94
  CLUS_2           55             47
  CLUS_3           48             41
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      126    143     59
  TP53 WILD-TYPE     38    104     84
D1V5, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          126             38
  CLUS_2          143            104
  CLUS_3           59             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53 MUTATED       82     57     48    106     35
  TP53 WILD-TYPE     39     47     43     15     82
D1V6, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           82             39
  CLUS_2           57             47
  CLUS_3           48             43
  CLUS_4          106             15
  CLUS_5           35             82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TP53 MUTATED      124    141     74
  TP53 WILD-TYPE     35    110     91
D1V7, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          124             35
  CLUS_2          141            110
  CLUS_3           74             91
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53 MUTATED       87     84     54     88     26
  TP53 WILD-TYPE     31     47     97      6     55
D1V8, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           87             31
  CLUS_2           84             47
  CLUS_3           54             97
  CLUS_4           88              6
  CLUS_5           26             55
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53 MUTATED      101     87     58     23     30
  TP53 WILD-TYPE     17     49     57     17     41
D1V9, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1          101             17
  CLUS_2           87             49
  CLUS_3           58             57
  CLUS_4           23             17
  CLUS_5           30             41
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53 MUTATED       35     75     54     48     87
  TP53 WILD-TYPE     13     34     76     53      5
D1V10, multiclass
        clus
vv       TP53 MUTATED TP53 WILD-TYPE
  CLUS_1           35             13
  CLUS_2           75             34
  CLUS_3           54             76
  CLUS_4           48             53
  CLUS_5           87              5
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(2) Variable = ARID1A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED       16     10     13     74
  ARID1A WILD-TYPE    119     82    159    102
D2V1, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             16              119
  CLUS_2             10               82
  CLUS_3             13              159
  CLUS_4             74              102
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED       61     10     27
  ARID1A WILD-TYPE    154    145    135
D2V2, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             61              154
  CLUS_2             10              145
  CLUS_3             27              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1A MUTATED       34     33     17      6
  ARID1A WILD-TYPE    101     91    108     54
D2V3, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             34              101
  CLUS_2             33               91
  CLUS_3             17              108
  CLUS_4              6               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED       52     23     15
  ARID1A WILD-TYPE    201     79     74
D2V4, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             52              201
  CLUS_2             23               79
  CLUS_3             15               74
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED       10     62     37
  ARID1A WILD-TYPE    154    185    106
D2V5, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             10              154
  CLUS_2             62              185
  CLUS_3             37              106
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1A MUTATED       16     25     30      4     34
  ARID1A WILD-TYPE    105     79     61    117     83
D2V6, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             16              105
  CLUS_2             25               79
  CLUS_3             30               61
  CLUS_4              4              117
  CLUS_5             34               83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1A MUTATED       13     73     28
  ARID1A WILD-TYPE    146    178    137
D2V7, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             13              146
  CLUS_2             73              178
  CLUS_3             28              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1A MUTATED       16     32     46      3     17
  ARID1A WILD-TYPE    102     99    105     91     64
D2V8, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1             16              102
  CLUS_2             32               99
  CLUS_3             46              105
  CLUS_4              3               91
  CLUS_5             17               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1A MUTATED        7     33     19      6     20
  ARID1A WILD-TYPE    111    103     96     34     51
D2V9, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              7              111
  CLUS_2             33              103
  CLUS_3             19               96
  CLUS_4              6               34
  CLUS_5             20               51
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1A MUTATED        9     24     34     16      2
  ARID1A WILD-TYPE     39     85     96     85     90
D2V10, multiclass
        clus
vv       ARID1A MUTATED ARID1A WILD-TYPE
  CLUS_1              9               39
  CLUS_2             24               85
  CLUS_3             34               96
  CLUS_4             16               85
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(3) Variable = MLL2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLL2 MUTATED       11      9     21     58
  MLL2 WILD-TYPE    124     83    151    118
D3V1, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           11            124
  CLUS_2            9             83
  CLUS_3           21            151
  CLUS_4           58            118
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL2 MUTATED       44     23     17
  MLL2 WILD-TYPE    171    132    145
D3V2, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           44            171
  CLUS_2           23            132
  CLUS_3           17            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLL2 MUTATED       32     33      6      8
  MLL2 WILD-TYPE    103     91    119     52
D3V3, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           32            103
  CLUS_2           33             91
  CLUS_3            6            119
  CLUS_4            8             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL2 MUTATED       55     17      7
  MLL2 WILD-TYPE    198     85     82
D3V4, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           55            198
  CLUS_2           17             85
  CLUS_3            7             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL2 MUTATED       29     47     19
  MLL2 WILD-TYPE    135    200    124
D3V5, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           29            135
  CLUS_2           47            200
  CLUS_3           19            124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL2 MUTATED        8     17     29     24     17
  MLL2 WILD-TYPE    113     87     62     97    100
D3V6, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1            8            113
  CLUS_2           17             87
  CLUS_3           29             62
  CLUS_4           24             97
  CLUS_5           17            100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL2 MUTATED       27     58     14
  MLL2 WILD-TYPE    132    193    151
D3V7, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           27            132
  CLUS_2           58            193
  CLUS_3           14            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL2 MUTATED        6     34     31     21      7
  MLL2 WILD-TYPE    112     97    120     73     74
D3V8, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1            6            112
  CLUS_2           34             97
  CLUS_3           31            120
  CLUS_4           21             73
  CLUS_5            7             74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL2 MUTATED       19     27      8      2     18
  MLL2 WILD-TYPE     99    109    107     38     53
D3V9, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1           19             99
  CLUS_2           27            109
  CLUS_3            8            107
  CLUS_4            2             38
  CLUS_5           18             53
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL2 MUTATED        0     25     26      4     19
  MLL2 WILD-TYPE     48     84    104     97     73
D3V10, multiclass
        clus
vv       MLL2 MUTATED MLL2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2           25             84
  CLUS_3           26            104
  CLUS_4            4             97
  CLUS_5           19             73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(4) Variable = RNF43 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNF43 MUTATED        4      1      2     40
  RNF43 WILD-TYPE    131     91    170    136
D4V1, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            40             136
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RNF43 MUTATED       29      1      7
  RNF43 WILD-TYPE    186    154    155
D4V2, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1            29             186
  CLUS_2             1             154
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNF43 MUTATED       13     22      3      3
  RNF43 WILD-TYPE    122    102    122     57
D4V3, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1            13             122
  CLUS_2            22             102
  CLUS_3             3             122
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RNF43 MUTATED       26     12      3
  RNF43 WILD-TYPE    227     90     86
D4V4, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1            26             227
  CLUS_2            12              90
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RNF43 MUTATED        3     30     10
  RNF43 WILD-TYPE    161    217    133
D4V5, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            30             217
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF43 MUTATED        2     10     25      1      5
  RNF43 WILD-TYPE    119     94     66    120    112
D4V6, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             2             119
  CLUS_2            10              94
  CLUS_3            25              66
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RNF43 MUTATED        2     38      7
  RNF43 WILD-TYPE    157    213    158
D4V7, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            38             213
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF43 MUTATED        2     21     18      1      5
  RNF43 WILD-TYPE    116    110    133     93     76
D4V8, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            21             110
  CLUS_3            18             133
  CLUS_4             1              93
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF43 MUTATED        2     14      3      1     11
  RNF43 WILD-TYPE    116    122    112     39     60
D4V9, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            14             122
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF43 MUTATED        1     11     14      4      1
  RNF43 WILD-TYPE     47     98    116     97     91
D4V10, multiclass
        clus
vv       RNF43 MUTATED RNF43 WILD-TYPE
  CLUS_1             1              47
  CLUS_2            11              98
  CLUS_3            14             116
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(5) Variable = SMAD4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAD4 MUTATED        7      9     14     11
  SMAD4 WILD-TYPE    128     83    158    165
D5V1, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             9              83
  CLUS_3            14             158
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD4 MUTATED       20      4     13
  SMAD4 WILD-TYPE    195    151    149
D5V2, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1            20             195
  CLUS_2             4             151
  CLUS_3            13             149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAD4 MUTATED        7     11      8      2
  SMAD4 WILD-TYPE    128    113    117     58
D5V3, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             7             128
  CLUS_2            11             113
  CLUS_3             8             117
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD4 MUTATED       13      7      8
  SMAD4 WILD-TYPE    240     95     81
D5V4, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             7              95
  CLUS_3             8              81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD4 MUTATED        7     24      8
  SMAD4 WILD-TYPE    157    223    135
D5V5, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            24             223
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD4 MUTATED        6      8     11      6      8
  SMAD4 WILD-TYPE    115     96     80    115    109
D5V6, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             6             115
  CLUS_2             8              96
  CLUS_3            11              80
  CLUS_4             6             115
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD4 MUTATED        6     23     12
  SMAD4 WILD-TYPE    153    228    153
D5V7, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            23             228
  CLUS_3            12             153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD4 MUTATED        5     15     12      3      6
  SMAD4 WILD-TYPE    113    116    139     91     75
D5V8, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            15             116
  CLUS_3            12             139
  CLUS_4             3              91
  CLUS_5             6              75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD4 MUTATED        7     12      9      0      4
  SMAD4 WILD-TYPE    111    124    106     40     67
D5V9, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             7             111
  CLUS_2            12             124
  CLUS_3             9             106
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD4 MUTATED        3     13      5      8      3
  SMAD4 WILD-TYPE     45     96    125     93     89
D5V10, multiclass
        clus
vv       SMAD4 MUTATED SMAD4 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            13              96
  CLUS_3             5             125
  CLUS_4             8              93
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(6) Variable = KRAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED        8      2      5     25
  KRAS WILD-TYPE    127     90    167    151
D6V1, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            8            127
  CLUS_2            2             90
  CLUS_3            5            167
  CLUS_4           25            151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED       23      2      7
  KRAS WILD-TYPE    192    153    155
D6V2, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1           23            192
  CLUS_2            2            153
  CLUS_3            7            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRAS MUTATED       16      8      8      3
  KRAS WILD-TYPE    119    116    117     57
D6V3, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1           16            119
  CLUS_2            8            116
  CLUS_3            8            117
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED       22      7      6
  KRAS WILD-TYPE    231     95     83
D6V4, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1           22            231
  CLUS_2            7             95
  CLUS_3            6             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        7     18     11
  KRAS WILD-TYPE    157    229    132
D6V5, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            7            157
  CLUS_2           18            229
  CLUS_3           11            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRAS MUTATED        4      5     17      1      9
  KRAS WILD-TYPE    117     99     74    120    108
D6V6, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            4            117
  CLUS_2            5             99
  CLUS_3           17             74
  CLUS_4            1            120
  CLUS_5            9            108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KRAS MUTATED        5     25     10
  KRAS WILD-TYPE    154    226    155
D6V7, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            5            154
  CLUS_2           25            226
  CLUS_3           10            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRAS MUTATED        4     18     13      0      5
  KRAS WILD-TYPE    114    113    138     94     76
D6V8, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            4            114
  CLUS_2           18            113
  CLUS_3           13            138
  CLUS_4            0             94
  CLUS_5            5             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRAS MUTATED        3      8      7      5      4
  KRAS WILD-TYPE    115    128    108     35     67
D6V9, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            3            115
  CLUS_2            8            128
  CLUS_3            7            108
  CLUS_4            5             35
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRAS MUTATED        2      6     11      8      0
  KRAS WILD-TYPE     46    103    119     93     92
D6V10, multiclass
        clus
vv       KRAS MUTATED KRAS WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3           11            119
  CLUS_4            8             93
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(7) Variable = XYLT2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XYLT2 MUTATED        1      3      2     33
  XYLT2 WILD-TYPE    134     89    170    143
D7V1, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             2             170
  CLUS_4            33             143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XYLT2 MUTATED       27      3      5
  XYLT2 WILD-TYPE    188    152    157
D7V2, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1            27             188
  CLUS_2             3             152
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XYLT2 MUTATED       15     16      1      1
  XYLT2 WILD-TYPE    120    108    124     59
D7V3, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1            15             120
  CLUS_2            16             108
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XYLT2 MUTATED       23      8      2
  XYLT2 WILD-TYPE    230     94     87
D7V4, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1            23             230
  CLUS_2             8              94
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XYLT2 MUTATED        2     26      9
  XYLT2 WILD-TYPE    162    221    134
D7V5, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            26             221
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XYLT2 MUTATED        2      9     21      0      5
  XYLT2 WILD-TYPE    119     95     70    121    112
D7V6, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             9              95
  CLUS_3            21              70
  CLUS_4             0             121
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XYLT2 MUTATED        4     30      6
  XYLT2 WILD-TYPE    155    221    159
D7V7, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            30             221
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XYLT2 MUTATED        4     18     15      0      3
  XYLT2 WILD-TYPE    114    113    136     94     78
D7V8, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            18             113
  CLUS_3            15             136
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XYLT2 MUTATED        0     13      3      2     12
  XYLT2 WILD-TYPE    118    123    112     38     59
D7V9, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2            13             123
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5            12              59
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XYLT2 MUTATED        1     12     14      3      0
  XYLT2 WILD-TYPE     47     97    116     98     92
D7V10, multiclass
        clus
vv       XYLT2 MUTATED XYLT2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2            12              97
  CLUS_3            14             116
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(8) Variable = PTEN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED        4      3      9     20
  PTEN WILD-TYPE    131     89    163    156
D8V1, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3             89
  CLUS_3            9            163
  CLUS_4           20            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       15      9      7
  PTEN WILD-TYPE    200    146    155
D8V2, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           15            200
  CLUS_2            9            146
  CLUS_3            7            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTEN MUTATED       13     11      2      1
  PTEN WILD-TYPE    122    113    123     59
D8V3, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           13            122
  CLUS_2           11            113
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED       19      7      1
  PTEN WILD-TYPE    234     95     88
D8V4, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1           19            234
  CLUS_2            7             95
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED        8     18      9
  PTEN WILD-TYPE    156    229    134
D8V5, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            8            156
  CLUS_2           18            229
  CLUS_3            9            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTEN MUTATED        4      6     10      6      9
  PTEN WILD-TYPE    117     98     81    115    108
D8V6, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            4            117
  CLUS_2            6             98
  CLUS_3           10             81
  CLUS_4            6            115
  CLUS_5            9            108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTEN MUTATED        9     22      6
  PTEN WILD-TYPE    150    229    159
D8V7, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            9            150
  CLUS_2           22            229
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTEN MUTATED        2     10     17      5      3
  PTEN WILD-TYPE    116    121    134     89     78
D8V8, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            2            116
  CLUS_2           10            121
  CLUS_3           17            134
  CLUS_4            5             89
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTEN MUTATED        6     12      2      0     10
  PTEN WILD-TYPE    112    124    113     40     61
D8V9, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            6            112
  CLUS_2           12            124
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5           10             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTEN MUTATED        1      8     15      2      4
  PTEN WILD-TYPE     47    101    115     99     88
D8V10, multiclass
        clus
vv       PTEN MUTATED PTEN WILD-TYPE
  CLUS_1            1             47
  CLUS_2            8            101
  CLUS_3           15            115
  CLUS_4            2             99
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(9) Variable = LARP4B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LARP4B MUTATED        4      2      2     26
  LARP4B WILD-TYPE    131     90    170    150
D9V1, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              2              170
  CLUS_4             26              150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP4B MUTATED       20      2      5
  LARP4B WILD-TYPE    195    153    157
D9V2, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1             20              195
  CLUS_2              2              153
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LARP4B MUTATED       13     11      3      2
  LARP4B WILD-TYPE    122    113    122     58
D9V3, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1             13              122
  CLUS_2             11              113
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP4B MUTATED       20      7      2
  LARP4B WILD-TYPE    233     95     87
D9V4, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1             20              233
  CLUS_2              7               95
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP4B MUTATED        6     17      9
  LARP4B WILD-TYPE    158    230    134
D9V5, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              6              158
  CLUS_2             17              230
  CLUS_3              9              134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP4B MUTATED        5      3     17      2      5
  LARP4B WILD-TYPE    116    101     74    119    112
D9V6, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              5              116
  CLUS_2              3              101
  CLUS_3             17               74
  CLUS_4              2              119
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP4B MUTATED        4     22      8
  LARP4B WILD-TYPE    155    229    157
D9V7, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              4              155
  CLUS_2             22              229
  CLUS_3              8              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP4B MUTATED        1     16     12      2      3
  LARP4B WILD-TYPE    117    115    139     92     78
D9V8, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              1              117
  CLUS_2             16              115
  CLUS_3             12              139
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP4B MUTATED        3     12      3      2      6
  LARP4B WILD-TYPE    115    124    112     38     65
D9V9, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              3              115
  CLUS_2             12              124
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP4B MUTATED        2     12      8      2      2
  LARP4B WILD-TYPE     46     97    122     99     90
D9V10, multiclass
        clus
vv       LARP4B MUTATED LARP4B WILD-TYPE
  CLUS_1              2               46
  CLUS_2             12               97
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(10) Variable = FBXW7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXW7 MUTATED        7      5      3     30
  FBXW7 WILD-TYPE    128     87    169    146
D10V1, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             5              87
  CLUS_3             3             169
  CLUS_4            30             146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FBXW7 MUTATED       23     12      7
  FBXW7 WILD-TYPE    192    143    155
D10V2, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1            23             192
  CLUS_2            12             143
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXW7 MUTATED       11     15      4      3
  FBXW7 WILD-TYPE    124    109    121     57
D10V3, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            15             109
  CLUS_3             4             121
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FBXW7 MUTATED       20      7      6
  FBXW7 WILD-TYPE    233     95     83
D10V4, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1            20             233
  CLUS_2             7              95
  CLUS_3             6              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FBXW7 MUTATED       10     21      9
  FBXW7 WILD-TYPE    154    226    134
D10V5, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1            10             154
  CLUS_2            21             226
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXW7 MUTATED        6      3     18      5      8
  FBXW7 WILD-TYPE    115    101     73    116    109
D10V6, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1             6             115
  CLUS_2             3             101
  CLUS_3            18              73
  CLUS_4             5             116
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FBXW7 MUTATED       11     25      9
  FBXW7 WILD-TYPE    148    226    156
D10V7, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1            11             148
  CLUS_2            25             226
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXW7 MUTATED        8     19      9      4      5
  FBXW7 WILD-TYPE    110    112    142     90     76
D10V8, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1             8             110
  CLUS_2            19             112
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXW7 MUTATED        9     14      5      3      8
  FBXW7 WILD-TYPE    109    122    110     37     63
D10V9, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1             9             109
  CLUS_2            14             122
  CLUS_3             5             110
  CLUS_4             3              37
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXW7 MUTATED        7     11     14      3      4
  FBXW7 WILD-TYPE     41     98    116     98     88
D10V10, multiclass
        clus
vv       FBXW7 MUTATED FBXW7 WILD-TYPE
  CLUS_1             7              41
  CLUS_2            11              98
  CLUS_3            14             116
  CLUS_4             3              98
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(11) Variable = RHOA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RHOA MUTATED        0      3      4     15
  RHOA WILD-TYPE    135     89    168    161
D11V1, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3             89
  CLUS_3            4            168
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOA MUTATED        8      3      9
  RHOA WILD-TYPE    207    152    153
D11V2, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            9            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RHOA MUTATED        5      5      6      2
  RHOA WILD-TYPE    130    119    119     58
D11V3, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            5            130
  CLUS_2            5            119
  CLUS_3            6            119
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOA MUTATED        9      5      4
  RHOA WILD-TYPE    244     97     85
D11V4, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            9            244
  CLUS_2            5             97
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOA MUTATED        2     10      8
  RHOA WILD-TYPE    162    237    135
D11V5, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            2            162
  CLUS_2           10            237
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOA MUTATED        1      5      5      2      7
  RHOA WILD-TYPE    120     99     86    119    110
D11V6, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            1            120
  CLUS_2            5             99
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOA MUTATED        3     11      8
  RHOA WILD-TYPE    156    240    157
D11V7, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            3            156
  CLUS_2           11            240
  CLUS_3            8            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOA MUTATED        1      4     10      2      5
  RHOA WILD-TYPE    117    127    141     92     76
D11V8, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3           10            141
  CLUS_4            2             92
  CLUS_5            5             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOA MUTATED        2      6      5      1      3
  RHOA WILD-TYPE    116    130    110     39     68
D11V9, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            130
  CLUS_3            5            110
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOA MUTATED        0      3      7      5      2
  RHOA WILD-TYPE     48    106    123     96     90
D11V10, multiclass
        clus
vv       RHOA MUTATED RHOA WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            7            123
  CLUS_4            5             96
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(12) Variable = B2M MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B2M MUTATED        0      1      2     17
  B2M WILD-TYPE    135     91    170    159
D12V1, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           0           135
  CLUS_2           1            91
  CLUS_3           2           170
  CLUS_4          17           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  B2M MUTATED       13      1      5
  B2M WILD-TYPE    202    154    157
D12V2, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1          13           202
  CLUS_2           1           154
  CLUS_3           5           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B2M MUTATED        3     10      1      1
  B2M WILD-TYPE    132    114    124     59
D12V3, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           3           132
  CLUS_2          10           114
  CLUS_3           1           124
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  B2M MUTATED       11      3      1
  B2M WILD-TYPE    242     99     88
D12V4, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1          11           242
  CLUS_2           3            99
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  B2M MUTATED        0     14      5
  B2M WILD-TYPE    164    233    138
D12V5, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           0           164
  CLUS_2          14           233
  CLUS_3           5           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B2M MUTATED        0      5     10      0      4
  B2M WILD-TYPE    121     99     81    121    113
D12V6, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           0           121
  CLUS_2           5            99
  CLUS_3          10            81
  CLUS_4           0           121
  CLUS_5           4           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  B2M MUTATED        1     14      5
  B2M WILD-TYPE    158    237    160
D12V7, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           1           158
  CLUS_2          14           237
  CLUS_3           5           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B2M MUTATED        0      9      7      0      4
  B2M WILD-TYPE    118    122    144     94     77
D12V8, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           0           118
  CLUS_2           9           122
  CLUS_3           7           144
  CLUS_4           0            94
  CLUS_5           4            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B2M MUTATED        0      9      3      0      7
  B2M WILD-TYPE    118    127    112     40     64
D12V9, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           0           118
  CLUS_2           9           127
  CLUS_3           3           112
  CLUS_4           0            40
  CLUS_5           7            64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B2M MUTATED        0      8      9      2      0
  B2M WILD-TYPE     48    101    121     99     92
D12V10, multiclass
        clus
vv       B2M MUTATED B2M WILD-TYPE
  CLUS_1           0            48
  CLUS_2           8           101
  CLUS_3           9           121
  CLUS_4           2            99
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(13) Variable = HLA-B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HLA-B MUTATED        1      4      4     26
  HLA-B WILD-TYPE    134     88    168    150
D13V1, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             1             134
  CLUS_2             4              88
  CLUS_3             4             168
  CLUS_4            26             150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-B MUTATED       20      3      6
  HLA-B WILD-TYPE    195    152    156
D13V2, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1            20             195
  CLUS_2             3             152
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HLA-B MUTATED       11     14      1      4
  HLA-B WILD-TYPE    124    110    124     56
D13V3, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1            11             124
  CLUS_2            14             110
  CLUS_3             1             124
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-B MUTATED       20      9      1
  HLA-B WILD-TYPE    233     93     88
D13V4, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1            20             233
  CLUS_2             9              93
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-B MUTATED        6     19      9
  HLA-B WILD-TYPE    158    228    134
D13V5, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             6             158
  CLUS_2            19             228
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-B MUTATED        2      7     14      4      7
  HLA-B WILD-TYPE    119     97     77    117    110
D13V6, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             2             119
  CLUS_2             7              97
  CLUS_3            14              77
  CLUS_4             4             117
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-B MUTATED        7     22      6
  HLA-B WILD-TYPE    152    229    159
D13V7, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             7             152
  CLUS_2            22             229
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-B MUTATED        4     12     13      4      2
  HLA-B WILD-TYPE    114    119    138     90     79
D13V8, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             4             114
  CLUS_2            12             119
  CLUS_3            13             138
  CLUS_4             4              90
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-B MUTATED        4      5      3      2      9
  HLA-B WILD-TYPE    114    131    112     38     62
D13V9, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             131
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             9              62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-B MUTATED        0      7     10      3      3
  HLA-B WILD-TYPE     48    102    120     98     89
D13V10, multiclass
        clus
vv       HLA-B MUTATED HLA-B WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3            10             120
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(14) Variable = C7ORF50 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C7ORF50 MUTATED        0      2      1     10
  C7ORF50 WILD-TYPE    135     90    171    166
D14V1, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4              10               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF50 MUTATED       11      1      0
  C7ORF50 WILD-TYPE    204    154    162
D14V2, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C7ORF50 MUTATED        3      5      1      2
  C7ORF50 WILD-TYPE    132    119    124     58
D14V3, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               5               119
  CLUS_3               1               124
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF50 MUTATED        8      2      1
  C7ORF50 WILD-TYPE    245    100     88
D14V4, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF50 MUTATED        1      9      2
  C7ORF50 WILD-TYPE    163    238    141
D14V5, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF50 MUTATED        1      3      5      1      2
  C7ORF50 WILD-TYPE    120    101     86    120    115
D14V6, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF50 MUTATED        2      9      2
  C7ORF50 WILD-TYPE    157    242    163
D14V7, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               9               242
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF50 MUTATED        1      6      3      1      2
  C7ORF50 WILD-TYPE    117    125    148     93     79
D14V8, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               3               148
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF50 MUTATED        1      4      2      1      4
  C7ORF50 WILD-TYPE    117    132    113     39     67
D14V9, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF50 MUTATED        0      6      4      1      1
  C7ORF50 WILD-TYPE     48    103    126    100     91
D14V10, multiclass
        clus
vv       C7ORF50 MUTATED C7ORF50 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               6               103
  CLUS_3               4               126
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(15) Variable = GNG12 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GNG12 MUTATED        1      0      0     11
  GNG12 WILD-TYPE    134     92    172    165
D15V1, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GNG12 MUTATED        6      0      2
  GNG12 WILD-TYPE    209    155    160
D15V2, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GNG12 MUTATED        3      6      1      1
  GNG12 WILD-TYPE    132    118    124     59
D15V3, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GNG12 MUTATED        8      1      2
  GNG12 WILD-TYPE    245    101     87
D15V4, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GNG12 MUTATED        2      5      4
  GNG12 WILD-TYPE    162    242    139
D15V5, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNG12 MUTATED        0      2      6      0      3
  GNG12 WILD-TYPE    121    102     85    121    114
D15V6, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GNG12 MUTATED        1      9      2
  GNG12 WILD-TYPE    158    242    163
D15V7, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNG12 MUTATED        0      4      8      0      0
  GNG12 WILD-TYPE    118    127    143     94     81
D15V8, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNG12 MUTATED        0      2      0      2      4
  GNG12 WILD-TYPE    118    134    115     38     67
D15V9, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNG12 MUTATED        0      3      5      0      0
  GNG12 WILD-TYPE     48    106    125    101     92
D15V10, multiclass
        clus
vv       GNG12 MUTATED GNG12 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(16) Variable = PLEKHA6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLEKHA6 MUTATED        1      1      5     20
  PLEKHA6 WILD-TYPE    134     91    167    156
D16V1, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               5               167
  CLUS_4              20               156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA6 MUTATED       18      1      5
  PLEKHA6 WILD-TYPE    197    154    157
D16V2, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1              18               197
  CLUS_2               1               154
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLEKHA6 MUTATED        7     11      5      1
  PLEKHA6 WILD-TYPE    128    113    120     59
D16V3, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               7               128
  CLUS_2              11               113
  CLUS_3               5               120
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA6 MUTATED       15      4      5
  PLEKHA6 WILD-TYPE    238     98     84
D16V4, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1              15               238
  CLUS_2               4                98
  CLUS_3               5                84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA6 MUTATED        2     14     10
  PLEKHA6 WILD-TYPE    162    233    133
D16V5, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               2               162
  CLUS_2              14               233
  CLUS_3              10               133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA6 MUTATED        2      3     12      2      7
  PLEKHA6 WILD-TYPE    119    101     79    119    110
D16V6, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3              12                79
  CLUS_4               2               119
  CLUS_5               7               110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA6 MUTATED        3     20      5
  PLEKHA6 WILD-TYPE    156    231    160
D16V7, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              20               231
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA6 MUTATED        3     10     11      1      3
  PLEKHA6 WILD-TYPE    115    121    140     93     78
D16V8, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              10               121
  CLUS_3              11               140
  CLUS_4               1                93
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA6 MUTATED        1     11      1      3      7
  PLEKHA6 WILD-TYPE    117    125    114     37     64
D16V9, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               1               117
  CLUS_2              11               125
  CLUS_3               1               114
  CLUS_4               3                37
  CLUS_5               7                64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA6 MUTATED        0     10      9      3      1
  PLEKHA6 WILD-TYPE     48     99    121     98     91
D16V10, multiclass
        clus
vv       PLEKHA6 MUTATED PLEKHA6 WILD-TYPE
  CLUS_1               0                48
  CLUS_2              10                99
  CLUS_3               9               121
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(17) Variable = PGM5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PGM5 MUTATED        1      3      3     35
  PGM5 WILD-TYPE    134     89    169    141
D17V1, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3             89
  CLUS_3            3            169
  CLUS_4           35            141
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGM5 MUTATED       28      2      4
  PGM5 WILD-TYPE    187    153    158
D17V2, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1           28            187
  CLUS_2            2            153
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PGM5 MUTATED       16     16      1      1
  PGM5 WILD-TYPE    119    108    124     59
D17V3, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1           16            119
  CLUS_2           16            108
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGM5 MUTATED       22      9      3
  PGM5 WILD-TYPE    231     93     86
D17V4, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1           22            231
  CLUS_2            9             93
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGM5 MUTATED        6     28      8
  PGM5 WILD-TYPE    158    219    135
D17V5, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            6            158
  CLUS_2           28            219
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGM5 MUTATED        1     11     22      2      6
  PGM5 WILD-TYPE    120     93     69    119    111
D17V6, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            1            120
  CLUS_2           11             93
  CLUS_3           22             69
  CLUS_4            2            119
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGM5 MUTATED        6     33      4
  PGM5 WILD-TYPE    153    218    161
D17V7, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            6            153
  CLUS_2           33            218
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGM5 MUTATED        3     22     14      2      2
  PGM5 WILD-TYPE    115    109    137     92     79
D17V8, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           22            109
  CLUS_3           14            137
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGM5 MUTATED        2     15      2      3      8
  PGM5 WILD-TYPE    116    121    113     37     63
D17V9, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           15            121
  CLUS_3            2            113
  CLUS_4            3             37
  CLUS_5            8             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGM5 MUTATED        1     13     13      1      2
  PGM5 WILD-TYPE     47     96    117    100     90
D17V10, multiclass
        clus
vv       PGM5 MUTATED PGM5 WILD-TYPE
  CLUS_1            1             47
  CLUS_2           13             96
  CLUS_3           13            117
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(18) Variable = MLL4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLL4 MUTATED        3      3      4     42
  MLL4 WILD-TYPE    132     89    168    134
D18V1, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3             89
  CLUS_3            4            168
  CLUS_4           42            134
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL4 MUTATED       31      6      9
  MLL4 WILD-TYPE    184    149    153
D18V2, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1           31            184
  CLUS_2            6            149
  CLUS_3            9            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLL4 MUTATED       18     18      7      3
  MLL4 WILD-TYPE    117    106    118     57
D18V3, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1           18            117
  CLUS_2           18            106
  CLUS_3            7            118
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL4 MUTATED       29     11      6
  MLL4 WILD-TYPE    224     91     83
D18V4, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1           29            224
  CLUS_2           11             91
  CLUS_3            6             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL4 MUTATED        7     31     13
  MLL4 WILD-TYPE    157    216    130
D18V5, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            7            157
  CLUS_2           31            216
  CLUS_3           13            130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL4 MUTATED        1     10     28      4      8
  MLL4 WILD-TYPE    120     94     63    117    109
D18V6, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            1            120
  CLUS_2           10             94
  CLUS_3           28             63
  CLUS_4            4            117
  CLUS_5            8            109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL4 MUTATED        7     39      7
  MLL4 WILD-TYPE    152    212    158
D18V7, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            7            152
  CLUS_2           39            212
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL4 MUTATED        4     19     22      4      4
  MLL4 WILD-TYPE    114    112    129     90     77
D18V8, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            4            114
  CLUS_2           19            112
  CLUS_3           22            129
  CLUS_4            4             90
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL4 MUTATED        4     16      4      2     14
  MLL4 WILD-TYPE    114    120    111     38     57
D18V9, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            4            114
  CLUS_2           16            120
  CLUS_3            4            111
  CLUS_4            2             38
  CLUS_5           14             57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL4 MUTATED        0     16     18      3      3
  MLL4 WILD-TYPE     48     93    112     98     89
D18V10, multiclass
        clus
vv       MLL4 MUTATED MLL4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2           16             93
  CLUS_3           18            112
  CLUS_4            3             98
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(19) Variable = KLF3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLF3 MUTATED        4      3      0     15
  KLF3 WILD-TYPE    131     89    172    161
D19V1, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3             89
  CLUS_3            0            172
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLF3 MUTATED       19      0      2
  KLF3 WILD-TYPE    196    155    160
D19V2, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1           19            196
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLF3 MUTATED        8      5      3      0
  KLF3 WILD-TYPE    127    119    122     60
D19V3, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            5            119
  CLUS_3            3            122
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLF3 MUTATED       10      3      3
  KLF3 WILD-TYPE    243     99     86
D19V4, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            3             99
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLF3 MUTATED        2      9     11
  KLF3 WILD-TYPE    162    238    132
D19V5, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            9            238
  CLUS_3           11            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLF3 MUTATED        2      2     12      0      6
  KLF3 WILD-TYPE    119    102     79    121    111
D19V6, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3           12             79
  CLUS_4            0            121
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLF3 MUTATED        2     14      6
  KLF3 WILD-TYPE    157    237    159
D19V7, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           14            237
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLF3 MUTATED        5      7      8      0      2
  KLF3 WILD-TYPE    113    124    143     94     79
D19V8, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            7            124
  CLUS_3            8            143
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLF3 MUTATED        0      8      6      2      5
  KLF3 WILD-TYPE    118    128    109     38     66
D19V9, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            8            128
  CLUS_3            6            109
  CLUS_4            2             38
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLF3 MUTATED        1      6      9      5      0
  KLF3 WILD-TYPE     47    103    121     96     92
D19V10, multiclass
        clus
vv       KLF3 MUTATED KLF3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3            9            121
  CLUS_4            5             96
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(20) Variable = ZBTB20 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED        3      1      2     36
  ZBTB20 WILD-TYPE    132     91    170    140
D20V1, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4             36              140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED       28      0      5
  ZBTB20 WILD-TYPE    187    155    157
D20V2, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1             28              187
  CLUS_2              0              155
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB20 MUTATED       12     14      4      2
  ZBTB20 WILD-TYPE    123    110    121     58
D20V3, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1             12              123
  CLUS_2             14              110
  CLUS_3              4              121
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED       19      8      5
  ZBTB20 WILD-TYPE    234     94     84
D20V4, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1             19              234
  CLUS_2              8               94
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        4     29      8
  ZBTB20 WILD-TYPE    160    218    135
D20V5, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             29              218
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB20 MUTATED        2      7     24      1      7
  ZBTB20 WILD-TYPE    119     97     67    120    110
D20V6, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              7               97
  CLUS_3             24               67
  CLUS_4              1              120
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB20 MUTATED        2     32      8
  ZBTB20 WILD-TYPE    157    219    157
D20V7, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             32              219
  CLUS_3              8              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB20 MUTATED        2     21     15      0      4
  ZBTB20 WILD-TYPE    116    110    136     94     77
D20V8, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             21              110
  CLUS_3             15              136
  CLUS_4              0               94
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB20 MUTATED        0     13      5      3      8
  ZBTB20 WILD-TYPE    118    123    110     37     63
D20V9, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              0              118
  CLUS_2             13              123
  CLUS_3              5              110
  CLUS_4              3               37
  CLUS_5              8               63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB20 MUTATED        0     13     13      2      1
  ZBTB20 WILD-TYPE     48     96    117     99     91
D20V10, multiclass
        clus
vv       ZBTB20 MUTATED ZBTB20 WILD-TYPE
  CLUS_1              0               48
  CLUS_2             13               96
  CLUS_3             13              117
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(21) Variable = MBD6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBD6 MUTATED        4      0      3     17
  MBD6 WILD-TYPE    131     92    169    159
D21V1, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD6 MUTATED       14      1      4
  MBD6 WILD-TYPE    201    154    158
D21V2, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1           14            201
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBD6 MUTATED        8     11      0      1
  MBD6 WILD-TYPE    127    113    125     59
D21V3, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            8            127
  CLUS_2           11            113
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD6 MUTATED       12      8      0
  MBD6 WILD-TYPE    241     94     89
D21V4, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1           12            241
  CLUS_2            8             94
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD6 MUTATED        3     17      3
  MBD6 WILD-TYPE    161    230    140
D21V5, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            3            161
  CLUS_2           17            230
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD6 MUTATED        1      4     16      0      2
  MBD6 WILD-TYPE    120    100     75    121    115
D21V6, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            4            100
  CLUS_3           16             75
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD6 MUTATED        1     19      5
  MBD6 WILD-TYPE    158    232    160
D21V7, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           19            232
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD6 MUTATED        3     12      9      0      1
  MBD6 WILD-TYPE    115    119    142     94     80
D21V8, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           12            119
  CLUS_3            9            142
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD6 MUTATED        0      6      3      1      5
  MBD6 WILD-TYPE    118    130    112     39     66
D21V9, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD6 MUTATED        0      8      4      3      0
  MBD6 WILD-TYPE     48    101    126     98     92
D21V10, multiclass
        clus
vv       MBD6 MUTATED MBD6 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            8            101
  CLUS_3            4            126
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(22) Variable = MUC6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC6 MUTATED       15      6     15     23
  MUC6 WILD-TYPE    120     86    157    153
D22V1, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           15            120
  CLUS_2            6             86
  CLUS_3           15            157
  CLUS_4           23            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MUC6 MUTATED       28     13     12
  MUC6 WILD-TYPE    187    142    150
D22V2, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           28            187
  CLUS_2           13            142
  CLUS_3           12            150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MUC6 MUTATED       15     15      5      4
  MUC6 WILD-TYPE    120    109    120     56
D22V3, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           15            120
  CLUS_2           15            109
  CLUS_3            5            120
  CLUS_4            4             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MUC6 MUTATED       26     10      3
  MUC6 WILD-TYPE    227     92     86
D22V4, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           26            227
  CLUS_2           10             92
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MUC6 MUTATED       15     31     12
  MUC6 WILD-TYPE    149    216    131
D22V5, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           15            149
  CLUS_2           31            216
  CLUS_3           12            131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MUC6 MUTATED       15     11     18      7      7
  MUC6 WILD-TYPE    106     93     73    114    110
D22V6, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           15            106
  CLUS_2           11             93
  CLUS_3           18             73
  CLUS_4            7            114
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MUC6 MUTATED       12     29     17
  MUC6 WILD-TYPE    147    222    148
D22V7, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           12            147
  CLUS_2           29            222
  CLUS_3           17            148
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MUC6 MUTATED       12     18     21      2      5
  MUC6 WILD-TYPE    106    113    130     92     76
D22V8, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1           12            106
  CLUS_2           18            113
  CLUS_3           21            130
  CLUS_4            2             92
  CLUS_5            5             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MUC6 MUTATED        9     15     11      4      7
  MUC6 WILD-TYPE    109    121    104     36     64
D22V9, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1            9            109
  CLUS_2           15            121
  CLUS_3           11            104
  CLUS_4            4             36
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MUC6 MUTATED        7     13     14     10      2
  MUC6 WILD-TYPE     41     96    116     91     90
D22V10, multiclass
        clus
vv       MUC6 MUTATED MUC6 WILD-TYPE
  CLUS_1            7             41
  CLUS_2           13             96
  CLUS_3           14            116
  CLUS_4           10             91
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(23) Variable = CBWD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBWD1 MUTATED        1      0      1     20
  CBWD1 WILD-TYPE    134     92    171    156
D23V1, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            20             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD1 MUTATED       16      1      1
  CBWD1 WILD-TYPE    199    154    161
D23V2, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBWD1 MUTATED        8     11      1      0
  CBWD1 WILD-TYPE    127    113    124     60
D23V3, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             8             127
  CLUS_2            11             113
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD1 MUTATED       11      8      1
  CBWD1 WILD-TYPE    242     94     88
D23V4, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             8              94
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD1 MUTATED        1     15      5
  CBWD1 WILD-TYPE    163    232    138
D23V5, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            15             232
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD1 MUTATED        1      4     12      1      3
  CBWD1 WILD-TYPE    120    100     79    120    114
D23V6, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3            12              79
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD1 MUTATED        1     18      3
  CBWD1 WILD-TYPE    158    233    162
D23V7, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            18             233
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD1 MUTATED        1      5     13      1      2
  CBWD1 WILD-TYPE    117    126    138     93     79
D23V8, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3            13             138
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD1 MUTATED        1      4      2      1      8
  CBWD1 WILD-TYPE    117    132    113     39     63
D23V9, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD1 MUTATED        0      2     12      1      1
  CBWD1 WILD-TYPE     48    107    118    100     91
D23V10, multiclass
        clus
vv       CBWD1 MUTATED CBWD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3            12             118
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(24) Variable = CTNND1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTNND1 MUTATED        5      3      3     22
  CTNND1 WILD-TYPE    130     89    169    154
D24V1, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4             22              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNND1 MUTATED       19      7      5
  CTNND1 WILD-TYPE    196    148    157
D24V2, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1             19              196
  CLUS_2              7              148
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTNND1 MUTATED       14      7      5      2
  CTNND1 WILD-TYPE    121    117    120     58
D24V3, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1             14              121
  CLUS_2              7              117
  CLUS_3              5              120
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNND1 MUTATED       19      5      4
  CTNND1 WILD-TYPE    234     97     85
D24V4, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1             19              234
  CLUS_2              5               97
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNND1 MUTATED        9     17      5
  CTNND1 WILD-TYPE    155    230    138
D24V5, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1              9              155
  CLUS_2             17              230
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNND1 MUTATED        5      5     12      5      4
  CTNND1 WILD-TYPE    116     99     79    116    113
D24V6, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1              5              116
  CLUS_2              5               99
  CLUS_3             12               79
  CLUS_4              5              116
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNND1 MUTATED       10     20      3
  CTNND1 WILD-TYPE    149    231    162
D24V7, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1             10              149
  CLUS_2             20              231
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNND1 MUTATED        5     12     10      4      2
  CTNND1 WILD-TYPE    113    119    141     90     79
D24V8, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1              5              113
  CLUS_2             12              119
  CLUS_3             10              141
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNND1 MUTATED        7      7      1      4      9
  CTNND1 WILD-TYPE    111    129    114     36     62
D24V9, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              7              129
  CLUS_3              1              114
  CLUS_4              4               36
  CLUS_5              9               62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNND1 MUTATED        5      6     11      2      4
  CTNND1 WILD-TYPE     43    103    119     99     88
D24V10, multiclass
        clus
vv       CTNND1 MUTATED CTNND1 WILD-TYPE
  CLUS_1              5               43
  CLUS_2              6              103
  CLUS_3             11              119
  CLUS_4              2               99
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(25) Variable = APC MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  APC MUTATED       17      5     15     25
  APC WILD-TYPE    118     87    157    151
D25V1, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          17           118
  CLUS_2           5            87
  CLUS_3          15           157
  CLUS_4          25           151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  APC MUTATED       27     13     12
  APC WILD-TYPE    188    142    150
D25V2, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          27           188
  CLUS_2          13           142
  CLUS_3          12           150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  APC MUTATED       17     18      4      7
  APC WILD-TYPE    118    106    121     53
D25V3, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          17           118
  CLUS_2          18           106
  CLUS_3           4           121
  CLUS_4           7            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  APC MUTATED       29     12      5
  APC WILD-TYPE    224     90     84
D25V4, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          29           224
  CLUS_2          12            90
  CLUS_3           5            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  APC MUTATED       14     34     11
  APC WILD-TYPE    150    213    132
D25V5, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          14           150
  CLUS_2          34           213
  CLUS_3          11           132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APC MUTATED       18     10     19      5      7
  APC WILD-TYPE    103     94     72    116    110
D25V6, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          18           103
  CLUS_2          10            94
  CLUS_3          19            72
  CLUS_4           5           116
  CLUS_5           7           110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  APC MUTATED       15     37      9
  APC WILD-TYPE    144    214    156
D25V7, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          15           144
  CLUS_2          37           214
  CLUS_3           9           156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APC MUTATED       17     23     15      3      3
  APC WILD-TYPE    101    108    136     91     78
D25V8, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          17           101
  CLUS_2          23           108
  CLUS_3          15           136
  CLUS_4           3            91
  CLUS_5           3            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APC MUTATED       10     19      6      3      9
  APC WILD-TYPE    108    117    109     37     62
D25V9, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          10           108
  CLUS_2          19           117
  CLUS_3           6           109
  CLUS_4           3            37
  CLUS_5           9            62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APC MUTATED       11     12     18      3      3
  APC WILD-TYPE     37     97    112     98     89
D25V10, multiclass
        clus
vv       APC MUTATED APC WILD-TYPE
  CLUS_1          11            37
  CLUS_2          12            97
  CLUS_3          18           112
  CLUS_4           3            98
  CLUS_5           3            89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(26) Variable = LARP7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LARP7 MUTATED        3      0      6     13
  LARP7 WILD-TYPE    132     92    166    163
D26V1, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             6             166
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LARP7 MUTATED       10      5      4
  LARP7 WILD-TYPE    205    150    158
D26V2, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             5             150
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LARP7 MUTATED        6     10      2      0
  LARP7 WILD-TYPE    129    114    123     60
D26V3, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            10             114
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LARP7 MUTATED       12      4      2
  LARP7 WILD-TYPE    241     98     87
D26V4, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LARP7 MUTATED        7      9      5
  LARP7 WILD-TYPE    157    238    138
D26V5, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             7             157
  CLUS_2             9             238
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP7 MUTATED        4      4      8      3      2
  LARP7 WILD-TYPE    117    100     83    118    115
D26V6, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             3             118
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LARP7 MUTATED        6     12      4
  LARP7 WILD-TYPE    153    239    161
D26V7, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP7 MUTATED        5      6      6      3      2
  LARP7 WILD-TYPE    113    125    145     91     79
D26V8, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             6             125
  CLUS_3             6             145
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP7 MUTATED        4      5      5      1      4
  LARP7 WILD-TYPE    114    131    110     39     67
D26V9, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             131
  CLUS_3             5             110
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP7 MUTATED        3      5      5      3      3
  LARP7 WILD-TYPE     45    104    125     98     89
D26V10, multiclass
        clus
vv       LARP7 MUTATED LARP7 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             5             104
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(27) Variable = DDX17 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX17 MUTATED        2      1      1     13
  DDX17 WILD-TYPE    133     91    171    163
D27V1, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX17 MUTATED       11      0      3
  DDX17 WILD-TYPE    204    155    159
D27V2, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX17 MUTATED        6      7      0      2
  DDX17 WILD-TYPE    129    117    125     58
D27V3, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             7             117
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX17 MUTATED       10      4      1
  DDX17 WILD-TYPE    243     98     88
D27V4, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX17 MUTATED        0     10      6
  DDX17 WILD-TYPE    164    237    137
D27V5, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            10             237
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX17 MUTATED        1      4     10      0      1
  DDX17 WILD-TYPE    120    100     81    121    116
D27V6, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3            10              81
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX17 MUTATED        0     16      1
  DDX17 WILD-TYPE    159    235    164
D27V7, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            16             235
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX17 MUTATED        1      7      9      0      0
  DDX17 WILD-TYPE    117    124    142     94     81
D27V8, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX17 MUTATED        0      3      1      1      6
  DDX17 WILD-TYPE    118    133    114     39     65
D27V9, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX17 MUTATED        0      4      6      1      0
  DDX17 WILD-TYPE     48    105    124    100     92
D27V10, multiclass
        clus
vv       DDX17 MUTATED DDX17 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(28) Variable = CIC MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED        4     10      7     33
  CIC WILD-TYPE    131     82    165    143
D28V1, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           4           131
  CLUS_2          10            82
  CLUS_3           7           165
  CLUS_4          33           143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       26      7     16
  CIC WILD-TYPE    189    148    146
D28V2, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          26           189
  CLUS_2           7           148
  CLUS_3          16           146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIC MUTATED       10     19     12      1
  CIC WILD-TYPE    125    105    113     59
D28V3, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          10           125
  CLUS_2          19           105
  CLUS_3          12           113
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       21     15      6
  CIC WILD-TYPE    232     87     83
D28V4, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          21           232
  CLUS_2          15            87
  CLUS_3           6            83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED        7     26     18
  CIC WILD-TYPE    157    221    125
D28V5, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           7           157
  CLUS_2          26           221
  CLUS_3          18           125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIC MUTATED       10      8     16      1     16
  CIC WILD-TYPE    111     96     75    120    101
D28V6, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          10           111
  CLUS_2           8            96
  CLUS_3          16            75
  CLUS_4           1           120
  CLUS_5          16           101
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CIC MUTATED       10     29     15
  CIC WILD-TYPE    149    222    150
D28V7, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          10           149
  CLUS_2          29           222
  CLUS_3          15           150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIC MUTATED       10     17     16      2      9
  CIC WILD-TYPE    108    114    135     92     72
D28V8, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1          10           108
  CLUS_2          17           114
  CLUS_3          16           135
  CLUS_4           2            92
  CLUS_5           9            72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIC MUTATED        5     11      9      2     10
  CIC WILD-TYPE    113    125    106     38     61
D28V9, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           5           113
  CLUS_2          11           125
  CLUS_3           9           106
  CLUS_4           2            38
  CLUS_5          10            61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIC MUTATED        3     14     10      8      2
  CIC WILD-TYPE     45     95    120     93     90
D28V10, multiclass
        clus
vv       CIC MUTATED CIC WILD-TYPE
  CLUS_1           3            45
  CLUS_2          14            95
  CLUS_3          10           120
  CLUS_4           8            93
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(29) Variable = TENC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TENC1 MUTATED        3      2      2     16
  TENC1 WILD-TYPE    132     90    170    160
D29V1, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TENC1 MUTATED       12      3      4
  TENC1 WILD-TYPE    203    152    158
D29V2, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             3             152
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TENC1 MUTATED        9      7      3      2
  TENC1 WILD-TYPE    126    117    122     58
D29V3, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             7             117
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TENC1 MUTATED       12      7      2
  TENC1 WILD-TYPE    241     95     87
D29V4, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             7              95
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TENC1 MUTATED        2     14      7
  TENC1 WILD-TYPE    162    233    136
D29V5, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            14             233
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TENC1 MUTATED        3      2     10      2      6
  TENC1 WILD-TYPE    118    102     81    119    111
D29V6, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             2             102
  CLUS_3            10              81
  CLUS_4             2             119
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TENC1 MUTATED        6     12      4
  TENC1 WILD-TYPE    153    239    161
D29V7, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TENC1 MUTATED        4      8      7      2      1
  TENC1 WILD-TYPE    114    123    144     92     80
D29V8, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             123
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TENC1 MUTATED        1      4      2      2      5
  TENC1 WILD-TYPE    117    132    113     38     66
D29V9, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TENC1 MUTATED        1      4      6      2      1
  TENC1 WILD-TYPE     47    105    124     99     91
D29V10, multiclass
        clus
vv       TENC1 MUTATED TENC1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(30) Variable = ARID4A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID4A MUTATED        2      0      3     18
  ARID4A WILD-TYPE    133     92    169    158
D30V1, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              3              169
  CLUS_4             18              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID4A MUTATED       12      1      7
  ARID4A WILD-TYPE    203    154    155
D30V2, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1             12              203
  CLUS_2              1              154
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID4A MUTATED       11      7      3      1
  ARID4A WILD-TYPE    124    117    122     59
D30V3, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1             11              124
  CLUS_2              7              117
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID4A MUTATED       14      6      2
  ARID4A WILD-TYPE    239     96     87
D30V4, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1             14              239
  CLUS_2              6               96
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID4A MUTATED        4     13      6
  ARID4A WILD-TYPE    160    234    137
D30V5, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              4              160
  CLUS_2             13              234
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID4A MUTATED        2      5      8      2      6
  ARID4A WILD-TYPE    119     99     83    119    111
D30V6, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              2              119
  CLUS_2              5               99
  CLUS_3              8               83
  CLUS_4              2              119
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID4A MUTATED        2     16      6
  ARID4A WILD-TYPE    157    235    159
D30V7, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              2              157
  CLUS_2             16              235
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID4A MUTATED        2      9      7      2      4
  ARID4A WILD-TYPE    116    122    144     92     77
D30V8, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              2              116
  CLUS_2              9              122
  CLUS_3              7              144
  CLUS_4              2               92
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID4A MUTATED        1      4      3      2      7
  ARID4A WILD-TYPE    117    132    112     38     64
D30V9, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID4A MUTATED        1      3      8      3      2
  ARID4A WILD-TYPE     47    106    122     98     90
D30V10, multiclass
        clus
vv       ARID4A MUTATED ARID4A WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              8              122
  CLUS_4              3               98
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(31) Variable = CDH1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDH1 MUTATED        4      2      4     22
  CDH1 WILD-TYPE    131     90    168    154
D31V1, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2             90
  CLUS_3            4            168
  CLUS_4           22            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDH1 MUTATED       12      1     16
  CDH1 WILD-TYPE    203    154    146
D31V2, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            1            154
  CLUS_3           16            146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDH1 MUTATED        6      5     17      2
  CDH1 WILD-TYPE    129    119    108     58
D31V3, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            5            119
  CLUS_3           17            108
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDH1 MUTATED       12      6     12
  CDH1 WILD-TYPE    241     96     77
D31V4, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1           12            241
  CLUS_2            6             96
  CLUS_3           12             77
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDH1 MUTATED        1     11     18
  CDH1 WILD-TYPE    163    236    125
D31V5, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2           11            236
  CLUS_3           18            125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH1 MUTATED        2      5      6      0     17
  CDH1 WILD-TYPE    119     99     85    121    100
D31V6, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            5             99
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5           17            100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDH1 MUTATED        0     15     18
  CDH1 WILD-TYPE    159    236    147
D31V7, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           15            236
  CLUS_3           18            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH1 MUTATED        2      3     12      0     16
  CDH1 WILD-TYPE    116    128    139     94     65
D31V8, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3           12            139
  CLUS_4            0             94
  CLUS_5           16             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH1 MUTATED        0      5     14      3      5
  CDH1 WILD-TYPE    118    131    101     37     66
D31V9, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3           14            101
  CLUS_4            3             37
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH1 MUTATED        1      2     11     13      0
  CDH1 WILD-TYPE     47    107    119     88     92
D31V10, multiclass
        clus
vv       CDH1 MUTATED CDH1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3           11            119
  CLUS_4           13             88
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(32) Variable = BCOR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED        2      2      3     24
  BCOR WILD-TYPE    133     90    169    152
D32V1, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4           24            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED       14      1     10
  BCOR WILD-TYPE    201    154    152
D32V2, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1           14            201
  CLUS_2            1            154
  CLUS_3           10            152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCOR MUTATED       11     12      2      1
  BCOR WILD-TYPE    124    112    123     59
D32V3, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1           11            124
  CLUS_2           12            112
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED       18      7      1
  BCOR WILD-TYPE    235     95     88
D32V4, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1           18            235
  CLUS_2            7             95
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        6     12     10
  BCOR WILD-TYPE    158    235    133
D32V5, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            6            158
  CLUS_2           12            235
  CLUS_3           10            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCOR MUTATED        5      3     10      1      9
  BCOR WILD-TYPE    116    101     81    120    108
D32V6, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            5            116
  CLUS_2            3            101
  CLUS_3           10             81
  CLUS_4            1            120
  CLUS_5            9            108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BCOR MUTATED        3     21      7
  BCOR WILD-TYPE    156    230    158
D32V7, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            3            156
  CLUS_2           21            230
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCOR MUTATED        3      8     15      1      4
  BCOR WILD-TYPE    115    123    136     93     77
D32V8, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            3            115
  CLUS_2            8            123
  CLUS_3           15            136
  CLUS_4            1             93
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCOR MUTATED        2      9      5      1      6
  BCOR WILD-TYPE    116    127    110     39     65
D32V9, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            2            116
  CLUS_2            9            127
  CLUS_3            5            110
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCOR MUTATED        2      5     11      4      1
  BCOR WILD-TYPE     46    104    119     97     91
D32V10, multiclass
        clus
vv       BCOR MUTATED BCOR WILD-TYPE
  CLUS_1            2             46
  CLUS_2            5            104
  CLUS_3           11            119
  CLUS_4            4             97
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(33) Variable = C14ORF43 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C14ORF43 MUTATED        2      2      4     24
  C14ORF43 WILD-TYPE    133     90    168    152
D33V1, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                 90
  CLUS_3                4                168
  CLUS_4               24                152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF43 MUTATED       20      3      5
  C14ORF43 WILD-TYPE    195    152    157
D33V2, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1               20                195
  CLUS_2                3                152
  CLUS_3                5                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C14ORF43 MUTATED       10     11      4      1
  C14ORF43 WILD-TYPE    125    113    121     59
D33V3, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1               10                125
  CLUS_2               11                113
  CLUS_3                4                121
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF43 MUTATED       19      3      4
  C14ORF43 WILD-TYPE    234     99     85
D33V4, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1               19                234
  CLUS_2                3                 99
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF43 MUTATED        6     17      7
  C14ORF43 WILD-TYPE    158    230    136
D33V5, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                6                158
  CLUS_2               17                230
  CLUS_3                7                136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF43 MUTATED        4      5     12      4      5
  C14ORF43 WILD-TYPE    117     99     79    117    112
D33V6, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                4                117
  CLUS_2                5                 99
  CLUS_3               12                 79
  CLUS_4                4                117
  CLUS_5                5                112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF43 MUTATED        5     21      6
  C14ORF43 WILD-TYPE    154    230    159
D33V7, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                5                154
  CLUS_2               21                230
  CLUS_3                6                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF43 MUTATED        2     16      8      2      4
  C14ORF43 WILD-TYPE    116    115    143     92     77
D33V8, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                2                116
  CLUS_2               16                115
  CLUS_3                8                143
  CLUS_4                2                 92
  CLUS_5                4                 77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF43 MUTATED        3     12      3      1      6
  C14ORF43 WILD-TYPE    115    124    112     39     65
D33V9, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                3                115
  CLUS_2               12                124
  CLUS_3                3                112
  CLUS_4                1                 39
  CLUS_5                6                 65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF43 MUTATED        1     13      6      3      2
  C14ORF43 WILD-TYPE     47     96    124     98     90
D33V10, multiclass
        clus
vv       C14ORF43 MUTATED C14ORF43 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2               13                 96
  CLUS_3                6                124
  CLUS_4                3                 98
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(34) Variable = ZBTB7C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB7C MUTATED        1      0      1     15
  ZBTB7C WILD-TYPE    134     92    171    161
D34V1, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB7C MUTATED       15      0      1
  ZBTB7C WILD-TYPE    200    155    161
D34V2, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1             15              200
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB7C MUTATED        7      4      0      1
  ZBTB7C WILD-TYPE    128    120    125     59
D34V3, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              7              128
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB7C MUTATED       10      1      1
  ZBTB7C WILD-TYPE    243    101     88
D34V4, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1             10              243
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB7C MUTATED        0     12      3
  ZBTB7C WILD-TYPE    164    235    140
D34V5, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              0              164
  CLUS_2             12              235
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB7C MUTATED        0      6      8      0      1
  ZBTB7C WILD-TYPE    121     98     83    121    116
D34V6, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              0              121
  CLUS_2              6               98
  CLUS_3              8               83
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB7C MUTATED        1     14      2
  ZBTB7C WILD-TYPE    158    237    163
D34V7, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              1              158
  CLUS_2             14              237
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB7C MUTATED        2      9      5      0      1
  ZBTB7C WILD-TYPE    116    122    146     94     80
D34V8, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              2              116
  CLUS_2              9              122
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB7C MUTATED        0      7      1      1      7
  ZBTB7C WILD-TYPE    118    129    114     39     64
D34V9, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              129
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB7C MUTATED        0      9      5      2      0
  ZBTB7C WILD-TYPE     48    100    125     99     92
D34V10, multiclass
        clus
vv       ZBTB7C MUTATED ZBTB7C WILD-TYPE
  CLUS_1              0               48
  CLUS_2              9              100
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(35) Variable = FRMD4A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FRMD4A MUTATED        3      2      6     16
  FRMD4A WILD-TYPE    132     90    166    160
D35V1, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2               90
  CLUS_3              6              166
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FRMD4A MUTATED       22      3      1
  FRMD4A WILD-TYPE    193    152    161
D35V2, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1             22              193
  CLUS_2              3              152
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FRMD4A MUTATED        7      9      2      3
  FRMD4A WILD-TYPE    128    115    123     57
D35V3, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              7              128
  CLUS_2              9              115
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FRMD4A MUTATED       13      6      2
  FRMD4A WILD-TYPE    240     96     87
D35V4, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1             13              240
  CLUS_2              6               96
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FRMD4A MUTATED        6     18      4
  FRMD4A WILD-TYPE    158    229    139
D35V5, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              6              158
  CLUS_2             18              229
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRMD4A MUTATED        2      6     13      3      4
  FRMD4A WILD-TYPE    119     98     78    118    113
D35V6, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              2              119
  CLUS_2              6               98
  CLUS_3             13               78
  CLUS_4              3              118
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FRMD4A MUTATED        4     20      4
  FRMD4A WILD-TYPE    155    231    161
D35V7, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              4              155
  CLUS_2             20              231
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRMD4A MUTATED        1     16      7      2      2
  FRMD4A WILD-TYPE    117    115    144     92     79
D35V8, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              1              117
  CLUS_2             16              115
  CLUS_3              7              144
  CLUS_4              2               92
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRMD4A MUTATED        3     12      2      2      5
  FRMD4A WILD-TYPE    115    124    113     38     66
D35V9, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              3              115
  CLUS_2             12              124
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRMD4A MUTATED        2     11      8      1      2
  FRMD4A WILD-TYPE     46     98    122    100     90
D35V10, multiclass
        clus
vv       FRMD4A MUTATED FRMD4A WILD-TYPE
  CLUS_1              2               46
  CLUS_2             11               98
  CLUS_3              8              122
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(36) Variable = PAX6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAX6 MUTATED        4      2      3     13
  PAX6 WILD-TYPE    131     90    169    163
D36V1, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX6 MUTATED       15      0      4
  PAX6 WILD-TYPE    200    155    158
D36V2, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1           15            200
  CLUS_2            0            155
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAX6 MUTATED        6      7      2      3
  PAX6 WILD-TYPE    129    117    123     57
D36V3, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX6 MUTATED       13      4      1
  PAX6 WILD-TYPE    240     98     88
D36V4, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX6 MUTATED        1     14      5
  PAX6 WILD-TYPE    163    233    138
D36V5, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            1            163
  CLUS_2           14            233
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX6 MUTATED        3      3     12      0      2
  PAX6 WILD-TYPE    118    101     79    121    115
D36V6, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3           12             79
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX6 MUTATED        0     17      4
  PAX6 WILD-TYPE    159    234    161
D36V7, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           17            234
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX6 MUTATED        1      9      8      0      3
  PAX6 WILD-TYPE    117    122    143     94     78
D36V8, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            9            122
  CLUS_3            8            143
  CLUS_4            0             94
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX6 MUTATED        0      6      2      1      6
  PAX6 WILD-TYPE    118    130    113     39     65
D36V9, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX6 MUTATED        0      5      9      1      0
  PAX6 WILD-TYPE     48    104    121    100     92
D36V10, multiclass
        clus
vv       PAX6 MUTATED PAX6 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            9            121
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(37) Variable = PRSS36 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRSS36 MUTATED        0      2      5     15
  PRSS36 WILD-TYPE    135     90    167    161
D37V1, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              5              167
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRSS36 MUTATED       12      3      2
  PRSS36 WILD-TYPE    203    152    160
D37V2, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRSS36 MUTATED        6     10      4      1
  PRSS36 WILD-TYPE    129    114    121     59
D37V3, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              6              129
  CLUS_2             10              114
  CLUS_3              4              121
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRSS36 MUTATED       12      4      5
  PRSS36 WILD-TYPE    241     98     84
D37V4, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              4               98
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRSS36 MUTATED        4      9      8
  PRSS36 WILD-TYPE    160    238    135
D37V5, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              9              238
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRSS36 MUTATED        1      5      7      3      5
  PRSS36 WILD-TYPE    120     99     84    118    112
D37V6, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              7               84
  CLUS_4              3              118
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRSS36 MUTATED        4     13      5
  PRSS36 WILD-TYPE    155    238    160
D37V7, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             13              238
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRSS36 MUTATED        3      6      5      3      5
  PRSS36 WILD-TYPE    115    125    146     91     76
D37V8, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              125
  CLUS_3              5              146
  CLUS_4              3               91
  CLUS_5              5               76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRSS36 MUTATED        3      6      3      0      5
  PRSS36 WILD-TYPE    115    130    112     40     66
D37V9, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              130
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRSS36 MUTATED        0      4      8      2      3
  PRSS36 WILD-TYPE     48    105    122     99     89
D37V10, multiclass
        clus
vv       PRSS36 MUTATED PRSS36 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(38) Variable = CDKN2A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        6      7     15      7
  CDKN2A WILD-TYPE    129     85    157    169
D38V1, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              6              129
  CLUS_2              7               85
  CLUS_3             15              157
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED       17     10      6
  CDKN2A WILD-TYPE    198    145    156
D38V2, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1             17              198
  CLUS_2             10              145
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKN2A MUTATED        6      9      4      2
  CDKN2A WILD-TYPE    129    115    121     58
D38V3, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              6              129
  CLUS_2              9              115
  CLUS_3              4              121
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED       15      3      3
  CDKN2A WILD-TYPE    238     99     86
D38V4, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1             15              238
  CLUS_2              3               99
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        6     20      8
  CDKN2A WILD-TYPE    158    227    135
D38V5, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              6              158
  CLUS_2             20              227
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKN2A MUTATED       11      7      6      6      4
  CDKN2A WILD-TYPE    110     97     85    115    113
D38V6, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1             11              110
  CLUS_2              7               97
  CLUS_3              6               85
  CLUS_4              6              115
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDKN2A MUTATED        8     19      8
  CDKN2A WILD-TYPE    151    232    157
D38V7, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              8              151
  CLUS_2             19              232
  CLUS_3              8              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKN2A MUTATED        8     11      7      6      3
  CDKN2A WILD-TYPE    110    120    144     88     78
D38V8, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              8              110
  CLUS_2             11              120
  CLUS_3              7              144
  CLUS_4              6               88
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKN2A MUTATED        9     14      8      1      1
  CDKN2A WILD-TYPE    109    122    107     39     70
D38V9, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              9              109
  CLUS_2             14              122
  CLUS_3              8              107
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKN2A MUTATED        4     13      5      5      6
  CDKN2A WILD-TYPE     44     96    125     96     86
D38V10, multiclass
        clus
vv       CDKN2A MUTATED CDKN2A WILD-TYPE
  CLUS_1              4               44
  CLUS_2             13               96
  CLUS_3              5              125
  CLUS_4              5               96
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(39) Variable = MVK MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MVK MUTATED        1      1      1     13
  MVK WILD-TYPE    134     91    171    163
D39V1, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           1           134
  CLUS_2           1            91
  CLUS_3           1           171
  CLUS_4          13           163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MVK MUTATED       11      0      1
  MVK WILD-TYPE    204    155    161
D39V2, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1          11           204
  CLUS_2           0           155
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MVK MUTATED        6      7      0      0
  MVK WILD-TYPE    129    117    125     60
D39V3, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           6           129
  CLUS_2           7           117
  CLUS_3           0           125
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MVK MUTATED       11      2      0
  MVK WILD-TYPE    242    100     89
D39V4, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1          11           242
  CLUS_2           2           100
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MVK MUTATED        1     12      1
  MVK WILD-TYPE    163    235    142
D39V5, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           1           163
  CLUS_2          12           235
  CLUS_3           1           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MVK MUTATED        0      3      9      0      2
  MVK WILD-TYPE    121    101     82    121    115
D39V6, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           0           121
  CLUS_2           3           101
  CLUS_3           9            82
  CLUS_4           0           121
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MVK MUTATED        1     13      2
  MVK WILD-TYPE    158    238    163
D39V7, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           1           158
  CLUS_2          13           238
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MVK MUTATED        1     11      3      0      1
  MVK WILD-TYPE    117    120    148     94     80
D39V8, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           1           117
  CLUS_2          11           120
  CLUS_3           3           148
  CLUS_4           0            94
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MVK MUTATED        0      4      2      1      1
  MVK WILD-TYPE    118    132    113     39     70
D39V9, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           0           118
  CLUS_2           4           132
  CLUS_3           2           113
  CLUS_4           1            39
  CLUS_5           1            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MVK MUTATED        0      4      2      2      0
  MVK WILD-TYPE     48    105    128     99     92
D39V10, multiclass
        clus
vv       MVK MUTATED MVK WILD-TYPE
  CLUS_1           0            48
  CLUS_2           4           105
  CLUS_3           2           128
  CLUS_4           2            99
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(40) Variable = KIAA0406 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0406 MUTATED        2      1      3     20
  KIAA0406 WILD-TYPE    133     91    169    156
D40V1, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4               20                156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0406 MUTATED       14      3      5
  KIAA0406 WILD-TYPE    201    152    157
D40V2, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1               14                201
  CLUS_2                3                152
  CLUS_3                5                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0406 MUTATED        7     11      4      1
  KIAA0406 WILD-TYPE    128    113    121     59
D40V3, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                7                128
  CLUS_2               11                113
  CLUS_3                4                121
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0406 MUTATED       14      5      4
  KIAA0406 WILD-TYPE    239     97     85
D40V4, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1               14                239
  CLUS_2                5                 97
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0406 MUTATED        3     14      8
  KIAA0406 WILD-TYPE    161    233    135
D40V5, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               14                233
  CLUS_3                8                135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0406 MUTATED        4      5     10      1      5
  KIAA0406 WILD-TYPE    117     99     81    120    112
D40V6, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                4                117
  CLUS_2                5                 99
  CLUS_3               10                 81
  CLUS_4                1                120
  CLUS_5                5                112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0406 MUTATED        1     17      8
  KIAA0406 WILD-TYPE    158    234    157
D40V7, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                1                158
  CLUS_2               17                234
  CLUS_3                8                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0406 MUTATED        3      9      9      1      4
  KIAA0406 WILD-TYPE    115    122    142     93     77
D40V8, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                9                122
  CLUS_3                9                142
  CLUS_4                1                 93
  CLUS_5                4                 77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0406 MUTATED        1      7      5      2      5
  KIAA0406 WILD-TYPE    117    129    110     38     66
D40V9, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                129
  CLUS_3                5                110
  CLUS_4                2                 38
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0406 MUTATED        3      7      7      2      1
  KIAA0406 WILD-TYPE     45    102    123     99     91
D40V10, multiclass
        clus
vv       KIAA0406 MUTATED KIAA0406 WILD-TYPE
  CLUS_1                3                 45
  CLUS_2                7                102
  CLUS_3                7                123
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(41) Variable = KIAA1967 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1967 MUTATED        1      1      3     21
  KIAA1967 WILD-TYPE    134     91    169    155
D41V1, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4               21                155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1967 MUTATED       16      1      4
  KIAA1967 WILD-TYPE    199    154    158
D41V2, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1               16                199
  CLUS_2                1                154
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1967 MUTATED        6     11      4      2
  KIAA1967 WILD-TYPE    129    113    121     58
D41V3, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                6                129
  CLUS_2               11                113
  CLUS_3                4                121
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1967 MUTATED       12      8      3
  KIAA1967 WILD-TYPE    241     94     86
D41V4, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                8                 94
  CLUS_3                3                 86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1967 MUTATED        3     13      8
  KIAA1967 WILD-TYPE    161    234    135
D41V5, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               13                234
  CLUS_3                8                135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1967 MUTATED        1      3     14      1      5
  KIAA1967 WILD-TYPE    120    101     77    120    112
D41V6, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                3                101
  CLUS_3               14                 77
  CLUS_4                1                120
  CLUS_5                5                112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1967 MUTATED        3     19      4
  KIAA1967 WILD-TYPE    156    232    161
D41V7, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               19                232
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1967 MUTATED        1     10     11      1      3
  KIAA1967 WILD-TYPE    117    121    140     93     78
D41V8, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                1                117
  CLUS_2               10                121
  CLUS_3               11                140
  CLUS_4                1                 93
  CLUS_5                3                 78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1967 MUTATED        1      7      3      3      4
  KIAA1967 WILD-TYPE    117    129    112     37     67
D41V9, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                129
  CLUS_3                3                112
  CLUS_4                3                 37
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1967 MUTATED        0      5      9      3      1
  KIAA1967 WILD-TYPE     48    104    121     98     91
D41V10, multiclass
        clus
vv       KIAA1967 MUTATED KIAA1967 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                9                121
  CLUS_4                3                 98
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(42) Variable = ZMYM4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYM4 MUTATED        3      3      3     15
  ZMYM4 WILD-TYPE    132     89    169    161
D42V1, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM4 MUTATED       11      6      1
  ZMYM4 WILD-TYPE    204    149    161
D42V2, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             6             149
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYM4 MUTATED       11      7      1      2
  ZMYM4 WILD-TYPE    124    117    124     58
D42V3, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM4 MUTATED       15      5      1
  ZMYM4 WILD-TYPE    238     97     88
D42V4, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1            15             238
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM4 MUTATED        5     12      6
  ZMYM4 WILD-TYPE    159    235    137
D42V5, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            12             235
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM4 MUTATED        5      2      9      2      5
  ZMYM4 WILD-TYPE    116    102     82    119    112
D42V6, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             2             102
  CLUS_3             9              82
  CLUS_4             2             119
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM4 MUTATED        5     15      4
  ZMYM4 WILD-TYPE    154    236    161
D42V7, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            15             236
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM4 MUTATED        4      7      9      2      2
  ZMYM4 WILD-TYPE    114    124    142     92     79
D42V8, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM4 MUTATED        3      5      2      3      4
  ZMYM4 WILD-TYPE    115    131    113     37     67
D42V9, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM4 MUTATED        2      4      8      1      2
  ZMYM4 WILD-TYPE     46    105    122    100     90
D42V10, multiclass
        clus
vv       ZMYM4 MUTATED ZMYM4 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             4             105
  CLUS_3             8             122
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(43) Variable = LMAN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LMAN1 MUTATED        0      0      2     15
  LMAN1 WILD-TYPE    135     92    170    161
D43V1, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LMAN1 MUTATED        9      2      3
  LMAN1 WILD-TYPE    206    153    159
D43V2, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LMAN1 MUTATED        5      6      1      0
  LMAN1 WILD-TYPE    130    118    124     60
D43V3, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LMAN1 MUTATED        8      3      1
  LMAN1 WILD-TYPE    245     99     88
D43V4, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LMAN1 MUTATED        4      9      3
  LMAN1 WILD-TYPE    160    238    140
D43V5, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LMAN1 MUTATED        1      2     10      2      1
  LMAN1 WILD-TYPE    120    102     81    119    116
D43V6, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3            10              81
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LMAN1 MUTATED        2     12      3
  LMAN1 WILD-TYPE    157    239    162
D43V7, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LMAN1 MUTATED        0      8      6      2      1
  LMAN1 WILD-TYPE    118    123    145     92     80
D43V8, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             123
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LMAN1 MUTATED        1      8      1      1      2
  LMAN1 WILD-TYPE    117    128    114     39     69
D43V9, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LMAN1 MUTATED        1      7      2      1      2
  LMAN1 WILD-TYPE     47    102    128    100     90
D43V10, multiclass
        clus
vv       LMAN1 MUTATED LMAN1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(44) Variable = TGFBR2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TGFBR2 MUTATED        4      2      9     16
  TGFBR2 WILD-TYPE    131     90    163    160
D44V1, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              9              163
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TGFBR2 MUTATED       12     10      6
  TGFBR2 WILD-TYPE    203    145    156
D44V2, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1             12              203
  CLUS_2             10              145
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TGFBR2 MUTATED        7      6      3      6
  TGFBR2 WILD-TYPE    128    118    122     54
D44V3, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              6              118
  CLUS_3              3              122
  CLUS_4              6               54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TGFBR2 MUTATED       17      3      2
  TGFBR2 WILD-TYPE    236     99     87
D44V4, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1             17              236
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TGFBR2 MUTATED       10     13      7
  TGFBR2 WILD-TYPE    154    234    136
D44V5, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1             10              154
  CLUS_2             13              234
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TGFBR2 MUTATED        4      7      5      9      5
  TGFBR2 WILD-TYPE    117     97     86    112    112
D44V6, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              7               97
  CLUS_3              5               86
  CLUS_4              9              112
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TGFBR2 MUTATED       10     13      8
  TGFBR2 WILD-TYPE    149    238    157
D44V7, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1             10              149
  CLUS_2             13              238
  CLUS_3              8              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TGFBR2 MUTATED        3      7      7      9      5
  TGFBR2 WILD-TYPE    115    124    144     85     76
D44V8, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              124
  CLUS_3              7              144
  CLUS_4              9               85
  CLUS_5              5               76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TGFBR2 MUTATED        7      6     10      1      2
  TGFBR2 WILD-TYPE    111    130    105     39     69
D44V9, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              6              130
  CLUS_3             10              105
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TGFBR2 MUTATED        1      5      6      6      8
  TGFBR2 WILD-TYPE     47    104    124     95     84
D44V10, multiclass
        clus
vv       TGFBR2 MUTATED TGFBR2 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              6              124
  CLUS_4              6               95
  CLUS_5              8               84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(45) Variable = SNAPC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNAPC1 MUTATED        0      2      1      8
  SNAPC1 WILD-TYPE    135     90    171    168
D45V1, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC1 MUTATED       10      1      0
  SNAPC1 WILD-TYPE    205    154    162
D45V2, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNAPC1 MUTATED        1      4      1      1
  SNAPC1 WILD-TYPE    134    120    124     59
D45V3, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC1 MUTATED        2      3      2
  SNAPC1 WILD-TYPE    251     99     87
D45V4, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC1 MUTATED        2      6      3
  SNAPC1 WILD-TYPE    162    241    140
D45V5, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC1 MUTATED        0      3      5      1      2
  SNAPC1 WILD-TYPE    121    101     86    120    115
D45V6, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              5               86
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC1 MUTATED        2      9      0
  SNAPC1 WILD-TYPE    157    242    165
D45V7, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              9              242
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC1 MUTATED        1      5      4      1      0
  SNAPC1 WILD-TYPE    117    126    147     93     81
D45V8, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC1 MUTATED        1      5      0      1      3
  SNAPC1 WILD-TYPE    117    131    115     39     68
D45V9, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC1 MUTATED        0      4      5      0      1
  SNAPC1 WILD-TYPE     48    105    125    101     91
D45V10, multiclass
        clus
vv       SNAPC1 MUTATED SNAPC1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(46) Variable = FZD3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FZD3 MUTATED        1      1      0     10
  FZD3 WILD-TYPE    134     91    172    166
D46V1, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZD3 MUTATED       10      0      1
  FZD3 WILD-TYPE    205    155    161
D46V2, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FZD3 MUTATED        2      5      2      0
  FZD3 WILD-TYPE    133    119    123     60
D46V3, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            5            119
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZD3 MUTATED        6      2      1
  FZD3 WILD-TYPE    247    100     88
D46V4, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZD3 MUTATED        1      5      4
  FZD3 WILD-TYPE    163    242    139
D46V5, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZD3 MUTATED        0      1      6      0      3
  FZD3 WILD-TYPE    121    103     85    121    114
D46V6, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZD3 MUTATED        0      9      3
  FZD3 WILD-TYPE    159    242    162
D46V7, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            9            242
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZD3 MUTATED        1      5      5      0      1
  FZD3 WILD-TYPE    117    126    146     94     80
D46V8, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZD3 MUTATED        0      3      2      1      5
  FZD3 WILD-TYPE    118    133    113     39     66
D46V9, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZD3 MUTATED        0      5      4      2      0
  FZD3 WILD-TYPE     48    104    126     99     92
D46V10, multiclass
        clus
vv       FZD3 MUTATED FZD3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            4            126
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(47) Variable = SCLT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCLT1 MUTATED        1      1      4     14
  SCLT1 WILD-TYPE    134     91    168    162
D47V1, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCLT1 MUTATED        9      4      2
  SCLT1 WILD-TYPE    206    151    160
D47V2, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             4             151
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCLT1 MUTATED        5      9      4      0
  SCLT1 WILD-TYPE    130    115    121     60
D47V3, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             9             115
  CLUS_3             4             121
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCLT1 MUTATED       11      3      4
  SCLT1 WILD-TYPE    242     99     85
D47V4, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCLT1 MUTATED        5      9      4
  SCLT1 WILD-TYPE    159    238    139
D47V5, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLT1 MUTATED        1      6      5      3      3
  SCLT1 WILD-TYPE    120     98     86    118    114
D47V6, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             6              98
  CLUS_3             5              86
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCLT1 MUTATED        4     12      4
  SCLT1 WILD-TYPE    155    239    161
D47V7, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLT1 MUTATED        1      6      7      3      3
  SCLT1 WILD-TYPE    117    125    144     91     78
D47V8, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLT1 MUTATED        3      6      1      0      2
  SCLT1 WILD-TYPE    115    130    114     40     69
D47V9, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLT1 MUTATED        0      5      3      1      3
  SCLT1 WILD-TYPE     48    104    127    100     89
D47V10, multiclass
        clus
vv       SCLT1 MUTATED SCLT1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(48) Variable = NWD1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NWD1 MUTATED        8      3      7     17
  NWD1 WILD-TYPE    127     89    165    159
D48V1, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            3             89
  CLUS_3            7            165
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NWD1 MUTATED       23      4      7
  NWD1 WILD-TYPE    192    151    155
D48V2, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1           23            192
  CLUS_2            4            151
  CLUS_3            7            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NWD1 MUTATED        8      8      8      2
  NWD1 WILD-TYPE    127    116    117     58
D48V3, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            8            116
  CLUS_3            8            117
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NWD1 MUTATED       15      6      5
  NWD1 WILD-TYPE    238     96     84
D48V4, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1           15            238
  CLUS_2            6             96
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NWD1 MUTATED        1     22     12
  NWD1 WILD-TYPE    163    225    131
D48V5, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2           22            225
  CLUS_3           12            131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NWD1 MUTATED        5      5     14      1     10
  NWD1 WILD-TYPE    116     99     77    120    107
D48V6, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            5            116
  CLUS_2            5             99
  CLUS_3           14             77
  CLUS_4            1            120
  CLUS_5           10            107
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NWD1 MUTATED        2     22     12
  NWD1 WILD-TYPE    157    229    153
D48V7, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           22            229
  CLUS_3           12            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NWD1 MUTATED        5     11     11      1      8
  NWD1 WILD-TYPE    113    120    140     93     73
D48V8, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            5            113
  CLUS_2           11            120
  CLUS_3           11            140
  CLUS_4            1             93
  CLUS_5            8             73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NWD1 MUTATED        1      8     10      3      7
  NWD1 WILD-TYPE    117    128    105     37     64
D48V9, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            128
  CLUS_3           10            105
  CLUS_4            3             37
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NWD1 MUTATED        1      6     12      9      1
  NWD1 WILD-TYPE     47    103    118     92     91
D48V10, multiclass
        clus
vv       NWD1 MUTATED NWD1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3           12            118
  CLUS_4            9             92
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(49) Variable = CYP27B1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP27B1 MUTATED        3      0      2      6
  CYP27B1 WILD-TYPE    132     92    170    170
D49V1, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP27B1 MUTATED        6      2      2
  CYP27B1 WILD-TYPE    209    153    160
D49V2, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP27B1 MUTATED        3      5      2      0
  CYP27B1 WILD-TYPE    132    119    123     60
D49V3, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               5               119
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP27B1 MUTATED        5      3      2
  CYP27B1 WILD-TYPE    248     99     87
D49V4, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP27B1 MUTATED        2      4      2
  CYP27B1 WILD-TYPE    162    243    141
D49V5, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP27B1 MUTATED        0      2      3      1      2
  CYP27B1 WILD-TYPE    121    102     88    120    115
D49V6, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP27B1 MUTATED        1      7      3
  CYP27B1 WILD-TYPE    158    244    162
D49V7, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               7               244
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP27B1 MUTATED        1      4      3      1      2
  CYP27B1 WILD-TYPE    117    127    148     93     79
D49V8, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               3               148
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP27B1 MUTATED        1      3      1      3      2
  CYP27B1 WILD-TYPE    117    133    114     37     69
D49V9, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               3                37
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP27B1 MUTATED        1      4      2      2      1
  CYP27B1 WILD-TYPE     47    105    128     99     91
D49V10, multiclass
        clus
vv       CYP27B1 MUTATED CYP27B1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               2               128
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(50) Variable = MTG1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTG1 MUTATED        0      1      2      8
  MTG1 WILD-TYPE    135     91    170    168
D50V1, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MTG1 MUTATED        6      2      2
  MTG1 WILD-TYPE    209    153    160
D50V2, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTG1 MUTATED        4      6      0      1
  MTG1 WILD-TYPE    131    118    125     59
D50V3, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            6            118
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MTG1 MUTATED        6      4      1
  MTG1 WILD-TYPE    247     98     88
D50V4, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MTG1 MUTATED        3      5      3
  MTG1 WILD-TYPE    161    242    140
D50V5, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTG1 MUTATED        1      1      5      2      2
  MTG1 WILD-TYPE    120    103     86    119    115
D50V6, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MTG1 MUTATED        4      7      1
  MTG1 WILD-TYPE    155    244    164
D50V7, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            4            155
  CLUS_2            7            244
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTG1 MUTATED        2      5      2      2      1
  MTG1 WILD-TYPE    116    126    149     92     80
D50V8, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            2            149
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTG1 MUTATED        2      4      1      1      1
  MTG1 WILD-TYPE    116    132    114     39     70
D50V9, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTG1 MUTATED        0      4      2      1      2
  MTG1 WILD-TYPE     48    105    128    100     90
D50V10, multiclass
        clus
vv       MTG1 MUTATED MTG1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(51) Variable = PRRG1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRRG1 MUTATED        1      0      1      9
  PRRG1 WILD-TYPE    134     92    171    167
D51V1, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG1 MUTATED        6      1      1
  PRRG1 WILD-TYPE    209    154    161
D51V2, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRRG1 MUTATED        3      3      1      2
  PRRG1 WILD-TYPE    132    121    124     58
D51V3, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG1 MUTATED        6      0      3
  PRRG1 WILD-TYPE    247    102     86
D51V4, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG1 MUTATED        2      5      4
  PRRG1 WILD-TYPE    162    242    139
D51V5, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG1 MUTATED        0      2      6      1      2
  PRRG1 WILD-TYPE    121    102     85    120    115
D51V6, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG1 MUTATED        1      7      3
  PRRG1 WILD-TYPE    158    244    162
D51V7, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG1 MUTATED        1      3      6      1      0
  PRRG1 WILD-TYPE    117    128    145     93     81
D51V8, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG1 MUTATED        0      2      2      1      3
  PRRG1 WILD-TYPE    118    134    113     39     68
D51V9, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG1 MUTATED        0      3      3      1      1
  PRRG1 WILD-TYPE     48    106    127    100     91
D51V10, multiclass
        clus
vv       PRRG1 MUTATED PRRG1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(52) Variable = KIAA1267 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1267 MUTATED        0      2      3     18
  KIAA1267 WILD-TYPE    135     90    169    158
D52V1, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                2                 90
  CLUS_3                3                169
  CLUS_4               18                158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1267 MUTATED        9      2      6
  KIAA1267 WILD-TYPE    206    153    156
D52V2, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                2                153
  CLUS_3                6                156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1267 MUTATED        6     11      1      2
  KIAA1267 WILD-TYPE    129    113    124     58
D52V3, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                6                129
  CLUS_2               11                113
  CLUS_3                1                124
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1267 MUTATED       12      6      2
  KIAA1267 WILD-TYPE    241     96     87
D52V4, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                6                 96
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1267 MUTATED        4     10      8
  KIAA1267 WILD-TYPE    160    237    135
D52V5, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               10                237
  CLUS_3                8                135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1267 MUTATED        1      1      9      4      7
  KIAA1267 WILD-TYPE    120    103     82    117    110
D52V6, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                9                 82
  CLUS_4                4                117
  CLUS_5                7                110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1267 MUTATED        3     14      6
  KIAA1267 WILD-TYPE    156    237    159
D52V7, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               14                237
  CLUS_3                6                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1267 MUTATED        2      5     10      4      2
  KIAA1267 WILD-TYPE    116    126    141     90     79
D52V8, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                126
  CLUS_3               10                141
  CLUS_4                4                 90
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1267 MUTATED        1      5      4      1      5
  KIAA1267 WILD-TYPE    117    131    111     39     66
D52V9, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                131
  CLUS_3                4                111
  CLUS_4                1                 39
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1267 MUTATED        0      3      8      2      3
  KIAA1267 WILD-TYPE     48    106    122     99     89
D52V10, multiclass
        clus
vv       KIAA1267 MUTATED KIAA1267 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                8                122
  CLUS_4                2                 99
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(53) Variable = P4HTM MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  P4HTM MUTATED        4      5      7     11
  P4HTM WILD-TYPE    131     87    165    165
D53V1, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5              87
  CLUS_3             7             165
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P4HTM MUTATED        9      4     10
  P4HTM WILD-TYPE    206    151    152
D53V2, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             9             206
  CLUS_2             4             151
  CLUS_3            10             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  P4HTM MUTATED        3      9      5      5
  P4HTM WILD-TYPE    132    115    120     55
D53V3, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             3             132
  CLUS_2             9             115
  CLUS_3             5             120
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P4HTM MUTATED       14      5      3
  P4HTM WILD-TYPE    239     97     86
D53V4, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1            14             239
  CLUS_2             5              97
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P4HTM MUTATED        3     13     10
  P4HTM WILD-TYPE    161    234    133
D53V5, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             3             161
  CLUS_2            13             234
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P4HTM MUTATED        4      7      6      1      8
  P4HTM WILD-TYPE    117     97     85    120    109
D53V6, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             4             117
  CLUS_2             7              97
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P4HTM MUTATED        4     12     11
  P4HTM WILD-TYPE    155    239    154
D53V7, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3            11             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P4HTM MUTATED        8      5     11      1      2
  P4HTM WILD-TYPE    110    126    140     93     79
D53V8, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             8             110
  CLUS_2             5             126
  CLUS_3            11             140
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P4HTM MUTATED        2      2      7      2      5
  P4HTM WILD-TYPE    116    134    108     38     66
D53V9, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             7             108
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P4HTM MUTATED        0      1      8      8      1
  P4HTM WILD-TYPE     48    108    122     93     91
D53V10, multiclass
        clus
vv       P4HTM MUTATED P4HTM WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             8             122
  CLUS_4             8              93
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(54) Variable = CEP57 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP57 MUTATED        0      2      0     11
  CEP57 WILD-TYPE    135     90    172    165
D54V1, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CEP57 MUTATED        7      0      1
  CEP57 WILD-TYPE    208    155    161
D54V2, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP57 MUTATED        2      7      1      2
  CEP57 WILD-TYPE    133    117    124     58
D54V3, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CEP57 MUTATED        6      5      1
  CEP57 WILD-TYPE    247     97     88
D54V4, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CEP57 MUTATED        1      8      3
  CEP57 WILD-TYPE    163    239    140
D54V5, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             8             239
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP57 MUTATED        1      2      7      0      2
  CEP57 WILD-TYPE    120    102     84    121    115
D54V6, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CEP57 MUTATED        2      9      2
  CEP57 WILD-TYPE    157    242    163
D54V7, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP57 MUTATED        2      3      6      0      2
  CEP57 WILD-TYPE    116    128    145     94     79
D54V8, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP57 MUTATED        0      2      0      1      4
  CEP57 WILD-TYPE    118    134    115     39     67
D54V9, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP57 MUTATED        0      2      5      0      0
  CEP57 WILD-TYPE     48    107    125    101     92
D54V10, multiclass
        clus
vv       CEP57 MUTATED CEP57 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(55) Variable = KRT75 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT75 MUTATED        4      6      7     20
  KRT75 WILD-TYPE    131     86    165    156
D55V1, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6              86
  CLUS_3             7             165
  CLUS_4            20             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT75 MUTATED       15      3     16
  KRT75 WILD-TYPE    200    152    146
D55V2, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             3             152
  CLUS_3            16             146
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT75 MUTATED        6     10      8      3
  KRT75 WILD-TYPE    129    114    117     57
D55V3, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            10             114
  CLUS_3             8             117
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT75 MUTATED       16      6      5
  KRT75 WILD-TYPE    237     96     84
D55V4, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1            16             237
  CLUS_2             6              96
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT75 MUTATED        3     15     17
  KRT75 WILD-TYPE    161    232    126
D55V5, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            15             232
  CLUS_3            17             126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT75 MUTATED        6      7      7      0     15
  KRT75 WILD-TYPE    115     97     84    121    102
D55V6, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             6             115
  CLUS_2             7              97
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5            15             102
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT75 MUTATED        6     19     12
  KRT75 WILD-TYPE    153    232    153
D55V7, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            19             232
  CLUS_3            12             153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT75 MUTATED       10      7     16      0      4
  KRT75 WILD-TYPE    108    124    135     94     77
D55V8, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1            10             108
  CLUS_2             7             124
  CLUS_3            16             135
  CLUS_4             0              94
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT75 MUTATED        3      6      9      3      4
  KRT75 WILD-TYPE    115    130    106     37     67
D55V9, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             9             106
  CLUS_4             3              37
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT75 MUTATED        2      5      7     11      0
  KRT75 WILD-TYPE     46    104    123     90     92
D55V10, multiclass
        clus
vv       KRT75 MUTATED KRT75 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4            11              90
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(56) Variable = FAHD2B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAHD2B MUTATED        0      0      0     12
  FAHD2B WILD-TYPE    135     92    172    164
D56V1, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2B MUTATED        9      0      1
  FAHD2B WILD-TYPE    206    155    161
D56V2, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              9              206
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAHD2B MUTATED        2      8      0      0
  FAHD2B WILD-TYPE    133    116    125     60
D56V3, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2B MUTATED        6      4      0
  FAHD2B WILD-TYPE    247     98     89
D56V4, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              6              247
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2B MUTATED        1      7      3
  FAHD2B WILD-TYPE    163    240    140
D56V5, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2B MUTATED        0      2      7      0      2
  FAHD2B WILD-TYPE    121    102     84    121    115
D56V6, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              7               84
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2B MUTATED        0     11      1
  FAHD2B WILD-TYPE    159    240    164
D56V7, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              0              159
  CLUS_2             11              240
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2B MUTATED        1      6      4      0      1
  FAHD2B WILD-TYPE    117    125    147     94     80
D56V8, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2B MUTATED        0      3      1      1      4
  FAHD2B WILD-TYPE    118    133    114     39     67
D56V9, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2B MUTATED        1      3      4      1      0
  FAHD2B WILD-TYPE     47    106    126    100     92
D56V10, multiclass
        clus
vv       FAHD2B MUTATED FAHD2B WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(57) Variable = DSTN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSTN MUTATED        1      0      1      4
  DSTN WILD-TYPE    134     92    171    172
D57V1, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSTN MUTATED        5      0      1
  DSTN WILD-TYPE    210    155    161
D57V2, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DSTN MUTATED        1      2      2      0
  DSTN WILD-TYPE    134    122    123     60
D57V3, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2            122
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSTN MUTATED        2      2      1
  DSTN WILD-TYPE    251    100     88
D57V4, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            2            251
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSTN MUTATED        0      4      2
  DSTN WILD-TYPE    164    243    141
D57V5, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            0            164
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DSTN MUTATED        0      1      3      0      2
  DSTN WILD-TYPE    121    103     88    121    115
D57V6, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DSTN MUTATED        0      5      2
  DSTN WILD-TYPE    159    246    163
D57V7, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            0            159
  CLUS_2            5            246
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DSTN MUTATED        0      4      3      0      0
  DSTN WILD-TYPE    118    127    148     94     81
D57V8, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DSTN MUTATED        0      3      0      1      1
  DSTN WILD-TYPE    118    133    115     39     70
D57V9, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DSTN MUTATED        0      3      1      1      0
  DSTN WILD-TYPE     48    106    129    100     92
D57V10, multiclass
        clus
vv       DSTN MUTATED DSTN WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(58) Variable = ZFP36L2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFP36L2 MUTATED        2      1      3      9
  ZFP36L2 WILD-TYPE    133     91    169    167
D58V1, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L2 MUTATED       10      0      3
  ZFP36L2 WILD-TYPE    205    155    159
D58V2, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1              10               205
  CLUS_2               0               155
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFP36L2 MUTATED        6      2      3      0
  ZFP36L2 WILD-TYPE    129    122    122     60
D58V3, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               2               122
  CLUS_3               3               122
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L2 MUTATED        8      0      3
  ZFP36L2 WILD-TYPE    245    102     86
D58V4, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               0               102
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L2 MUTATED        2     10      3
  ZFP36L2 WILD-TYPE    162    237    140
D58V5, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               2               162
  CLUS_2              10               237
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L2 MUTATED        3      4      5      1      2
  ZFP36L2 WILD-TYPE    118    100     86    120    115
D58V6, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               4               100
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L2 MUTATED        1     10      4
  ZFP36L2 WILD-TYPE    158    241    161
D58V7, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               1               158
  CLUS_2              10               241
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L2 MUTATED        3      8      2      1      1
  ZFP36L2 WILD-TYPE    115    123    149     93     80
D58V8, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               8               123
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L2 MUTATED        0      6      2      0      1
  ZFP36L2 WILD-TYPE    118    130    113     40     70
D58V9, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               130
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L2 MUTATED        0      5      3      1      0
  ZFP36L2 WILD-TYPE     48    104    127    100     92
D58V10, multiclass
        clus
vv       ZFP36L2 MUTATED ZFP36L2 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(59) Variable = RNF128 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNF128 MUTATED        2      0      0     13
  RNF128 WILD-TYPE    133     92    172    163
D59V1, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF128 MUTATED       11      1      2
  RNF128 WILD-TYPE    204    154    160
D59V2, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1             11              204
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNF128 MUTATED        4      8      0      1
  RNF128 WILD-TYPE    131    116    125     59
D59V3, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF128 MUTATED       10      2      1
  RNF128 WILD-TYPE    243    100     88
D59V4, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF128 MUTATED        1     11      3
  RNF128 WILD-TYPE    163    236    140
D59V5, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              1              163
  CLUS_2             11              236
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF128 MUTATED        1      2      8      0      4
  RNF128 WILD-TYPE    120    102     83    121    113
D59V6, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              8               83
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF128 MUTATED        3     10      2
  RNF128 WILD-TYPE    156    241    163
D59V7, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             10              241
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF128 MUTATED        1      8      6      0      0
  RNF128 WILD-TYPE    117    123    145     94     81
D59V8, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              123
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF128 MUTATED        0      7      0      0      4
  RNF128 WILD-TYPE    118    129    115     40     67
D59V9, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              129
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF128 MUTATED        1      6      4      0      0
  RNF128 WILD-TYPE     47    103    126    101     92
D59V10, multiclass
        clus
vv       RNF128 MUTATED RNF128 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              6              103
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(60) Variable = FHOD3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FHOD3 MUTATED        7      2      6     21
  FHOD3 WILD-TYPE    128     90    166    155
D60V1, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             2              90
  CLUS_3             6             166
  CLUS_4            21             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHOD3 MUTATED       19      4      3
  FHOD3 WILD-TYPE    196    151    159
D60V2, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FHOD3 MUTATED       12     10      4      2
  FHOD3 WILD-TYPE    123    114    121     58
D60V3, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1            12             123
  CLUS_2            10             114
  CLUS_3             4             121
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHOD3 MUTATED       18      4      6
  FHOD3 WILD-TYPE    235     98     83
D60V4, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1            18             235
  CLUS_2             4              98
  CLUS_3             6              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHOD3 MUTATED        5     19      9
  FHOD3 WILD-TYPE    159    228    134
D60V5, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            19             228
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHOD3 MUTATED        4      8     11      4      6
  FHOD3 WILD-TYPE    117     96     80    117    111
D60V6, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             8              96
  CLUS_3            11              80
  CLUS_4             4             117
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHOD3 MUTATED        4     27      5
  FHOD3 WILD-TYPE    155    224    160
D60V7, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            27             224
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHOD3 MUTATED        4     16     13      2      1
  FHOD3 WILD-TYPE    114    115    138     92     80
D60V8, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            16             115
  CLUS_3            13             138
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHOD3 MUTATED        3      9      1      3      8
  FHOD3 WILD-TYPE    115    127    114     37     63
D60V9, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             9             127
  CLUS_3             1             114
  CLUS_4             3              37
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHOD3 MUTATED        0      9     12      1      2
  FHOD3 WILD-TYPE     48    100    118    100     90
D60V10, multiclass
        clus
vv       FHOD3 MUTATED FHOD3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             9             100
  CLUS_3            12             118
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(61) Variable = OSBP2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSBP2 MUTATED        1      0      2     12
  OSBP2 WILD-TYPE    134     92    170    164
D61V1, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OSBP2 MUTATED        9      1      2
  OSBP2 WILD-TYPE    206    154    160
D61V2, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSBP2 MUTATED        3      8      1      1
  OSBP2 WILD-TYPE    132    116    124     59
D61V3, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             8             116
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OSBP2 MUTATED        8      4      1
  OSBP2 WILD-TYPE    245     98     88
D61V4, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OSBP2 MUTATED        1     10      4
  OSBP2 WILD-TYPE    163    237    139
D61V5, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            10             237
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBP2 MUTATED        1      4      7      1      2
  OSBP2 WILD-TYPE    120    100     84    120    115
D61V6, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OSBP2 MUTATED        1     13      1
  OSBP2 WILD-TYPE    158    238    164
D61V7, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            13             238
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBP2 MUTATED        1      7      6      0      1
  OSBP2 WILD-TYPE    117    124    145     94     80
D61V8, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBP2 MUTATED        0      6      0      1      4
  OSBP2 WILD-TYPE    118    130    115     39     67
D61V9, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBP2 MUTATED        0      5      6      0      0
  OSBP2 WILD-TYPE     48    104    124    101     92
D61V10, multiclass
        clus
vv       OSBP2 MUTATED OSBP2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(62) Variable = NFASC MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NFASC MUTATED        8      3      1     24
  NFASC WILD-TYPE    127     89    171    152
D62V1, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             8             127
  CLUS_2             3              89
  CLUS_3             1             171
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NFASC MUTATED       22      5      4
  NFASC WILD-TYPE    193    150    158
D62V2, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1            22             193
  CLUS_2             5             150
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NFASC MUTATED       12     10      1      2
  NFASC WILD-TYPE    123    114    124     58
D62V3, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1            12             123
  CLUS_2            10             114
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NFASC MUTATED       16      8      1
  NFASC WILD-TYPE    237     94     88
D62V4, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1            16             237
  CLUS_2             8              94
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NFASC MUTATED        9     20      7
  NFASC WILD-TYPE    155    227    136
D62V5, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             9             155
  CLUS_2            20             227
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFASC MUTATED        5      7     16      2      6
  NFASC WILD-TYPE    116     97     75    119    111
D62V6, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             5             116
  CLUS_2             7              97
  CLUS_3            16              75
  CLUS_4             2             119
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NFASC MUTATED        7     25      5
  NFASC WILD-TYPE    152    226    160
D62V7, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             7             152
  CLUS_2            25             226
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFASC MUTATED        3     14     17      1      2
  NFASC WILD-TYPE    115    117    134     93     79
D62V8, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             3             115
  CLUS_2            14             117
  CLUS_3            17             134
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFASC MUTATED        3     11      2      3      8
  NFASC WILD-TYPE    115    125    113     37     63
D62V9, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             3             115
  CLUS_2            11             125
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFASC MUTATED        2     11     12      2      0
  NFASC WILD-TYPE     46     98    118     99     92
D62V10, multiclass
        clus
vv       NFASC MUTATED NFASC WILD-TYPE
  CLUS_1             2              46
  CLUS_2            11              98
  CLUS_3            12             118
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(63) Variable = EPB49 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPB49 MUTATED        1      2      3     11
  EPB49 WILD-TYPE    134     90    169    165
D63V1, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB49 MUTATED        7      3      3
  EPB49 WILD-TYPE    208    152    159
D63V2, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPB49 MUTATED        6      6      2      0
  EPB49 WILD-TYPE    129    118    123     60
D63V3, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB49 MUTATED       11      3      0
  EPB49 WILD-TYPE    242     99     89
D63V4, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB49 MUTATED        5      9      3
  EPB49 WILD-TYPE    159    238    140
D63V5, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB49 MUTATED        1      4      6      3      3
  EPB49 WILD-TYPE    120    100     85    118    114
D63V6, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB49 MUTATED        4     10      3
  EPB49 WILD-TYPE    155    241    162
D63V7, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB49 MUTATED        2      6      5      3      1
  EPB49 WILD-TYPE    116    125    146     91     80
D63V8, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             5             146
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB49 MUTATED        2      7      2      0      1
  EPB49 WILD-TYPE    116    129    113     40     70
D63V9, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB49 MUTATED        0      7      1      1      3
  EPB49 WILD-TYPE     48    102    129    100     89
D63V10, multiclass
        clus
vv       EPB49 MUTATED EPB49 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(64) Variable = WNT1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WNT1 MUTATED        1      1      0      8
  WNT1 WILD-TYPE    134     91    172    168
D64V1, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNT1 MUTATED        8      2      1
  WNT1 WILD-TYPE    207    153    161
D64V2, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WNT1 MUTATED        4      1      0      1
  WNT1 WILD-TYPE    131    123    125     59
D64V3, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNT1 MUTATED        4      1      1
  WNT1 WILD-TYPE    249    101     88
D64V4, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNT1 MUTATED        0      7      4
  WNT1 WILD-TYPE    164    240    139
D64V5, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            7            240
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT1 MUTATED        0      3      7      0      1
  WNT1 WILD-TYPE    121    101     84    121    116
D64V6, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNT1 MUTATED        2      8      1
  WNT1 WILD-TYPE    157    243    164
D64V7, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            8            243
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT1 MUTATED        2      6      3      0      0
  WNT1 WILD-TYPE    116    125    148     94     81
D64V8, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT1 MUTATED        0      6      0      0      4
  WNT1 WILD-TYPE    118    130    115     40     67
D64V9, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT1 MUTATED        0      5      5      0      0
  WNT1 WILD-TYPE     48    104    125    101     92
D64V10, multiclass
        clus
vv       WNT1 MUTATED WNT1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(65) Variable = ATXN2L MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATXN2L MUTATED        2      2      2     17
  ATXN2L WILD-TYPE    133     90    170    159
D65V1, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              2              170
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATXN2L MUTATED       15      2      3
  ATXN2L WILD-TYPE    200    153    159
D65V2, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1             15              200
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATXN2L MUTATED        7      8      4      1
  ATXN2L WILD-TYPE    128    116    121     59
D65V3, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              7              128
  CLUS_2              8              116
  CLUS_3              4              121
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATXN2L MUTATED       14      3      3
  ATXN2L WILD-TYPE    239     99     86
D65V4, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1             14              239
  CLUS_2              3               99
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATXN2L MUTATED        2     17      5
  ATXN2L WILD-TYPE    162    230    138
D65V5, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              2              162
  CLUS_2             17              230
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATXN2L MUTATED        2      4     13      1      4
  ATXN2L WILD-TYPE    119    100     78    120    113
D65V6, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3             13               78
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATXN2L MUTATED        4     17      4
  ATXN2L WILD-TYPE    155    234    161
D65V7, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              4              155
  CLUS_2             17              234
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATXN2L MUTATED        5     10      7      1      2
  ATXN2L WILD-TYPE    113    121    144     93     79
D65V8, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              5              113
  CLUS_2             10              121
  CLUS_3              7              144
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATXN2L MUTATED        2      7      3      1      5
  ATXN2L WILD-TYPE    116    129    112     39     66
D65V9, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              129
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATXN2L MUTATED        1      5      7      4      1
  ATXN2L WILD-TYPE     47    104    123     97     91
D65V10, multiclass
        clus
vv       ATXN2L MUTATED ATXN2L WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              7              123
  CLUS_4              4               97
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(66) Variable = C9ORF131 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF131 MUTATED        2      2      3     17
  C9ORF131 WILD-TYPE    133     90    169    159
D66V1, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                 90
  CLUS_3                3                169
  CLUS_4               17                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF131 MUTATED       13      3      4
  C9ORF131 WILD-TYPE    202    152    158
D66V2, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1               13                202
  CLUS_2                3                152
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF131 MUTATED        9      6      3      0
  C9ORF131 WILD-TYPE    126    118    122     60
D66V3, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                9                126
  CLUS_2                6                118
  CLUS_3                3                122
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF131 MUTATED       11      4      3
  C9ORF131 WILD-TYPE    242     98     86
D66V4, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1               11                242
  CLUS_2                4                 98
  CLUS_3                3                 86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF131 MUTATED        4     10      7
  C9ORF131 WILD-TYPE    160    237    136
D66V5, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               10                237
  CLUS_3                7                136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF131 MUTATED        3      5      7      2      4
  C9ORF131 WILD-TYPE    118     99     84    119    113
D66V6, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                5                 99
  CLUS_3                7                 84
  CLUS_4                2                119
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF131 MUTATED        5     13      6
  C9ORF131 WILD-TYPE    154    238    159
D66V7, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                5                154
  CLUS_2               13                238
  CLUS_3                6                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF131 MUTATED        4      8      6      2      4
  C9ORF131 WILD-TYPE    114    123    145     92     77
D66V8, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                4                114
  CLUS_2                8                123
  CLUS_3                6                145
  CLUS_4                2                 92
  CLUS_5                4                 77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF131 MUTATED        3      4      4      1      5
  C9ORF131 WILD-TYPE    115    132    111     39     66
D66V9, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                4                132
  CLUS_3                4                111
  CLUS_4                1                 39
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF131 MUTATED        3      5      4      3      2
  C9ORF131 WILD-TYPE     45    104    126     98     90
D66V10, multiclass
        clus
vv       C9ORF131 MUTATED C9ORF131 WILD-TYPE
  CLUS_1                3                 45
  CLUS_2                5                104
  CLUS_3                4                126
  CLUS_4                3                 98
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(67) Variable = MFRP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MFRP MUTATED        1      2      1     14
  MFRP WILD-TYPE    134     90    171    162
D67V1, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFRP MUTATED       11      0      3
  MFRP WILD-TYPE    204    155    159
D67V2, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1           11            204
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MFRP MUTATED        5      9      0      1
  MFRP WILD-TYPE    130    115    125     59
D67V3, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            5            130
  CLUS_2            9            115
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFRP MUTATED       11      4      0
  MFRP WILD-TYPE    242     98     89
D67V4, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1           11            242
  CLUS_2            4             98
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFRP MUTATED        3     11      3
  MFRP WILD-TYPE    161    236    140
D67V5, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            3            161
  CLUS_2           11            236
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFRP MUTATED        1      2     12      1      1
  MFRP WILD-TYPE    120    102     79    120    116
D67V6, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3           12             79
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFRP MUTATED        1     13      4
  MFRP WILD-TYPE    158    238    161
D67V7, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            1            158
  CLUS_2           13            238
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFRP MUTATED        2      7      7      1      1
  MFRP WILD-TYPE    116    124    144     93     80
D67V8, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            124
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFRP MUTATED        0      5      2      2      3
  MFRP WILD-TYPE    118    131    113     38     68
D67V9, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFRP MUTATED        1      6      3      1      1
  MFRP WILD-TYPE     47    103    127    100     91
D67V10, multiclass
        clus
vv       MFRP MUTATED MFRP WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(68) Variable = WASF3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WASF3 MUTATED        3      1      3     15
  WASF3 WILD-TYPE    132     91    169    161
D68V1, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WASF3 MUTATED       16      2      2
  WASF3 WILD-TYPE    199    153    160
D68V2, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WASF3 MUTATED       10      8      1      1
  WASF3 WILD-TYPE    125    116    124     59
D68V3, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             8             116
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WASF3 MUTATED       13      5      2
  WASF3 WILD-TYPE    240     97     87
D68V4, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WASF3 MUTATED        2     14      4
  WASF3 WILD-TYPE    162    233    139
D68V5, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            14             233
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WASF3 MUTATED        2      4      9      1      4
  WASF3 WILD-TYPE    119    100     82    120    113
D68V6, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WASF3 MUTATED        3     17      2
  WASF3 WILD-TYPE    156    234    163
D68V7, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            17             234
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WASF3 MUTATED        3     10      6      1      2
  WASF3 WILD-TYPE    115    121    145     93     79
D68V8, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            10             121
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WASF3 MUTATED        1      8      1      3      5
  WASF3 WILD-TYPE    117    128    114     37     66
D68V9, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             1             114
  CLUS_4             3              37
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WASF3 MUTATED        1      5      9      2      1
  WASF3 WILD-TYPE     47    104    121     99     91
D68V10, multiclass
        clus
vv       WASF3 MUTATED WASF3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             9             121
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(69) Variable = ADAM30 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADAM30 MUTATED        1      1      3     14
  ADAM30 WILD-TYPE    134     91    169    162
D69V1, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             14              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADAM30 MUTATED        9      1      4
  ADAM30 WILD-TYPE    206    154    158
D69V2, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADAM30 MUTATED        7      7      2      1
  ADAM30 WILD-TYPE    128    117    123     59
D69V3, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              7              117
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADAM30 MUTATED       11      4      2
  ADAM30 WILD-TYPE    242     98     87
D69V4, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADAM30 MUTATED        2     12      4
  ADAM30 WILD-TYPE    162    235    139
D69V5, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             12              235
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAM30 MUTATED        1      4      8      1      4
  ADAM30 WILD-TYPE    120    100     83    120    113
D69V6, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADAM30 MUTATED        1     14      4
  ADAM30 WILD-TYPE    158    237    161
D69V7, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             14              237
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAM30 MUTATED        3      8      6      1      1
  ADAM30 WILD-TYPE    115    123    145     93     80
D69V8, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              6              145
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAM30 MUTATED        1      4      1      1      4
  ADAM30 WILD-TYPE    117    132    114     39     67
D69V9, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAM30 MUTATED        0      4      4      2      1
  ADAM30 WILD-TYPE     48    105    126     99     91
D69V10, multiclass
        clus
vv       ADAM30 MUTATED ADAM30 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(70) Variable = HOXD8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HOXD8 MUTATED        2      0      0     12
  HOXD8 WILD-TYPE    133     92    172    164
D70V1, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXD8 MUTATED        9      0      2
  HOXD8 WILD-TYPE    206    155    160
D70V2, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HOXD8 MUTATED        5      6      0      1
  HOXD8 WILD-TYPE    130    118    125     59
D70V3, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             6             118
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXD8 MUTATED        9      3      0
  HOXD8 WILD-TYPE    244     99     89
D70V4, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXD8 MUTATED        1      8      4
  HOXD8 WILD-TYPE    163    239    139
D70V5, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             8             239
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXD8 MUTATED        1      3      7      0      2
  HOXD8 WILD-TYPE    120    101     84    121    115
D70V6, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXD8 MUTATED        1     11      2
  HOXD8 WILD-TYPE    158    240    163
D70V7, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXD8 MUTATED        2      6      6      0      0
  HOXD8 WILD-TYPE    116    125    145     94     81
D70V8, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXD8 MUTATED        1      4      1      1      4
  HOXD8 WILD-TYPE    117    132    114     39     67
D70V9, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXD8 MUTATED        0      5      5      1      0
  HOXD8 WILD-TYPE     48    104    125    100     92
D70V10, multiclass
        clus
vv       HOXD8 MUTATED HOXD8 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(71) Variable = PAFAH1B1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAFAH1B1 MUTATED        0      1      3     11
  PAFAH1B1 WILD-TYPE    135     91    169    165
D71V1, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4               11                165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PAFAH1B1 MUTATED       10      0      3
  PAFAH1B1 WILD-TYPE    205    155    159
D71V2, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1               10                205
  CLUS_2                0                155
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAFAH1B1 MUTATED        7      3      3      1
  PAFAH1B1 WILD-TYPE    128    121    122     59
D71V3, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                3                121
  CLUS_3                3                122
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PAFAH1B1 MUTATED       10      2      2
  PAFAH1B1 WILD-TYPE    243    100     87
D71V4, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1               10                243
  CLUS_2                2                100
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PAFAH1B1 MUTATED        3      8      5
  PAFAH1B1 WILD-TYPE    161    239    138
D71V5, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                8                239
  CLUS_3                5                138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAFAH1B1 MUTATED        2      3      7      1      3
  PAFAH1B1 WILD-TYPE    119    101     84    120    114
D71V6, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                3                101
  CLUS_3                7                 84
  CLUS_4                1                120
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PAFAH1B1 MUTATED        2      9      5
  PAFAH1B1 WILD-TYPE    157    242    160
D71V7, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                9                242
  CLUS_3                5                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAFAH1B1 MUTATED        1      7      6      0      2
  PAFAH1B1 WILD-TYPE    117    124    145     94     79
D71V8, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                124
  CLUS_3                6                145
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAFAH1B1 MUTATED        0      3      3      1      5
  PAFAH1B1 WILD-TYPE    118    133    112     39     66
D71V9, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                133
  CLUS_3                3                112
  CLUS_4                1                 39
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAFAH1B1 MUTATED        1      4      6      1      0
  PAFAH1B1 WILD-TYPE     47    105    124    100     92
D71V10, multiclass
        clus
vv       PAFAH1B1 MUTATED PAFAH1B1 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                4                105
  CLUS_3                6                124
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(72) Variable = PAX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAX2 MUTATED        0      0      2     10
  PAX2 WILD-TYPE    135     92    170    166
D72V1, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX2 MUTATED        6      1      4
  PAX2 WILD-TYPE    209    154    158
D72V2, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAX2 MUTATED        8      4      0      0
  PAX2 WILD-TYPE    127    120    125     60
D72V3, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX2 MUTATED        8      4      0
  PAX2 WILD-TYPE    245     98     89
D72V4, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            4             98
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX2 MUTATED        1      5      5
  PAX2 WILD-TYPE    163    242    138
D72V5, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX2 MUTATED        0      2      5      0      4
  PAX2 WILD-TYPE    121    102     86    121    113
D72V6, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX2 MUTATED        0      8      4
  PAX2 WILD-TYPE    159    243    161
D72V7, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX2 MUTATED        0      2      8      0      2
  PAX2 WILD-TYPE    118    129    143     94     79
D72V8, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            8            143
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX2 MUTATED        0      1      2      0      5
  PAX2 WILD-TYPE    118    135    113     40     66
D72V9, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX2 MUTATED        0      0      6      2      0
  PAX2 WILD-TYPE     48    109    124     99     92
D72V10, multiclass
        clus
vv       PAX2 MUTATED PAX2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            0            109
  CLUS_3            6            124
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(73) Variable = INPPL1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INPPL1 MUTATED        1      1      2     22
  INPPL1 WILD-TYPE    134     91    170    154
D73V1, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4             22              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPPL1 MUTATED       12      1      3
  INPPL1 WILD-TYPE    203    154    159
D73V2, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INPPL1 MUTATED        5     11      3      2
  INPPL1 WILD-TYPE    130    113    122     58
D73V3, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2             11              113
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPPL1 MUTATED       12      7      2
  INPPL1 WILD-TYPE    241     95     87
D73V4, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              7               95
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPPL1 MUTATED        3     12      9
  INPPL1 WILD-TYPE    161    235    134
D73V5, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             12              235
  CLUS_3              9              134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPPL1 MUTATED        1      5     10      2      6
  INPPL1 WILD-TYPE    120     99     81    119    111
D73V6, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3             10               81
  CLUS_4              2              119
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPPL1 MUTATED        2     18      6
  INPPL1 WILD-TYPE    157    233    159
D73V7, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             18              233
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPPL1 MUTATED        2      9     11      1      3
  INPPL1 WILD-TYPE    116    122    140     93     78
D73V8, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              9              122
  CLUS_3             11              140
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPPL1 MUTATED        1      5      2      0      6
  INPPL1 WILD-TYPE    117    131    113     40     65
D73V9, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPPL1 MUTATED        0      3      8      3      0
  INPPL1 WILD-TYPE     48    106    122     98     92
D73V10, multiclass
        clus
vv       INPPL1 MUTATED INPPL1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              8              122
  CLUS_4              3               98
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(74) Variable = MCM8 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCM8 MUTATED        1      4      7     14
  MCM8 WILD-TYPE    134     88    165    162
D74V1, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            4             88
  CLUS_3            7            165
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCM8 MUTATED       15      1      9
  MCM8 WILD-TYPE    200    154    153
D74V2, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1           15            200
  CLUS_2            1            154
  CLUS_3            9            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCM8 MUTATED        6      8      5      2
  MCM8 WILD-TYPE    129    116    120     58
D74V3, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            8            116
  CLUS_3            5            120
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCM8 MUTATED       12      6      3
  MCM8 WILD-TYPE    241     96     86
D74V4, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1           12            241
  CLUS_2            6             96
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCM8 MUTATED        4     10     11
  MCM8 WILD-TYPE    160    237    132
D74V5, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           10            237
  CLUS_3           11            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCM8 MUTATED        5      5      7      0      8
  MCM8 WILD-TYPE    116     99     84    121    109
D74V6, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            5            116
  CLUS_2            5             99
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            8            109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCM8 MUTATED        3     16      7
  MCM8 WILD-TYPE    156    235    158
D74V7, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           16            235
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCM8 MUTATED        8      7     10      0      1
  MCM8 WILD-TYPE    110    124    141     94     80
D74V8, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            8            110
  CLUS_2            7            124
  CLUS_3           10            141
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCM8 MUTATED        2      5      7      3      6
  MCM8 WILD-TYPE    116    131    108     37     65
D74V9, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            7            108
  CLUS_4            3             37
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCM8 MUTATED        3      4      8      8      0
  MCM8 WILD-TYPE     45    105    122     93     92
D74V10, multiclass
        clus
vv       MCM8 MUTATED MCM8 WILD-TYPE
  CLUS_1            3             45
  CLUS_2            4            105
  CLUS_3            8            122
  CLUS_4            8             93
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(75) Variable = NLK MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NLK MUTATED        3      2      3     10
  NLK WILD-TYPE    132     90    169    166
D75V1, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           3           132
  CLUS_2           2            90
  CLUS_3           3           169
  CLUS_4          10           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NLK MUTATED       10      3      1
  NLK WILD-TYPE    205    152    161
D75V2, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1          10           205
  CLUS_2           3           152
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NLK MUTATED        7      3      3      1
  NLK WILD-TYPE    128    121    122     59
D75V3, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           7           128
  CLUS_2           3           121
  CLUS_3           3           122
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NLK MUTATED       12      0      2
  NLK WILD-TYPE    241    102     87
D75V4, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1          12           241
  CLUS_2           0           102
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NLK MUTATED        4      8      4
  NLK WILD-TYPE    160    239    139
D75V5, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           4           160
  CLUS_2           8           239
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLK MUTATED        4      3      5      3      1
  NLK WILD-TYPE    117    101     86    118    116
D75V6, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           4           117
  CLUS_2           3           101
  CLUS_3           5            86
  CLUS_4           3           118
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NLK MUTATED        4     12      2
  NLK WILD-TYPE    155    239    163
D75V7, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           4           155
  CLUS_2          12           239
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLK MUTATED        2      6      7      2      1
  NLK WILD-TYPE    116    125    144     92     80
D75V8, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           2           116
  CLUS_2           6           125
  CLUS_3           7           144
  CLUS_4           2            92
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLK MUTATED        2      4      1      2      5
  NLK WILD-TYPE    116    132    114     38     66
D75V9, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           2           116
  CLUS_2           4           132
  CLUS_3           1           114
  CLUS_4           2            38
  CLUS_5           5            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLK MUTATED        1      6      4      1      2
  NLK WILD-TYPE     47    103    126    100     90
D75V10, multiclass
        clus
vv       NLK MUTATED NLK WILD-TYPE
  CLUS_1           1            47
  CLUS_2           6           103
  CLUS_3           4           126
  CLUS_4           1           100
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(76) Variable = NFE2L2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NFE2L2 MUTATED        1      3     13      1
  NFE2L2 WILD-TYPE    134     89    159    175
D76V1, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3               89
  CLUS_3             13              159
  CLUS_4              1              175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L2 MUTATED        0     16      2
  NFE2L2 WILD-TYPE    215    139    160
D76V2, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1              0              215
  CLUS_2             16              139
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NFE2L2 MUTATED        3      6      3      2
  NFE2L2 WILD-TYPE    132    118    122     58
D76V3, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              6              118
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L2 MUTATED       10      2      2
  NFE2L2 WILD-TYPE    243    100     87
D76V4, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L2 MUTATED       16      0      2
  NFE2L2 WILD-TYPE    148    247    141
D76V5, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1             16              148
  CLUS_2              0              247
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L2 MUTATED        2      0      0     15      1
  NFE2L2 WILD-TYPE    119    104     91    106    116
D76V6, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              0              104
  CLUS_3              0               91
  CLUS_4             15              106
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L2 MUTATED       16      1      1
  NFE2L2 WILD-TYPE    143    250    164
D76V7, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1             16              143
  CLUS_2              1              250
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L2 MUTATED        1      1      1     15      0
  NFE2L2 WILD-TYPE    117    130    150     79     81
D76V8, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              130
  CLUS_3              1              150
  CLUS_4             15               79
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L2 MUTATED       15      1      0      1      1
  NFE2L2 WILD-TYPE    103    135    115     39     70
D76V9, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1             15              103
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L2 MUTATED        0      0      2      1     15
  NFE2L2 WILD-TYPE     48    109    128    100     77
D76V10, multiclass
        clus
vv       NFE2L2 MUTATED NFE2L2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              0              109
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5             15               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(77) Variable = NBN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NBN MUTATED        2      2      4     12
  NBN WILD-TYPE    133     90    168    164
D77V1, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           2           133
  CLUS_2           2            90
  CLUS_3           4           168
  CLUS_4          12           164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NBN MUTATED       10      8      0
  NBN WILD-TYPE    205    147    162
D77V2, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1          10           205
  CLUS_2           8           147
  CLUS_3           0           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NBN MUTATED       10      5      3      0
  NBN WILD-TYPE    125    119    122     60
D77V3, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1          10           125
  CLUS_2           5           119
  CLUS_3           3           122
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NBN MUTATED       13      2      3
  NBN WILD-TYPE    240    100     86
D77V4, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1          13           240
  CLUS_2           2           100
  CLUS_3           3            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NBN MUTATED        4     11      5
  NBN WILD-TYPE    160    236    138
D77V5, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           4           160
  CLUS_2          11           236
  CLUS_3           5           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NBN MUTATED        2      9      2      3      4
  NBN WILD-TYPE    119     95     89    118    113
D77V6, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           2           119
  CLUS_2           9            95
  CLUS_3           2            89
  CLUS_4           3           118
  CLUS_5           4           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NBN MUTATED        4     10      6
  NBN WILD-TYPE    155    241    159
D77V7, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           4           155
  CLUS_2          10           241
  CLUS_3           6           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NBN MUTATED        2      6      5      3      4
  NBN WILD-TYPE    116    125    146     91     77
D77V8, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           2           116
  CLUS_2           6           125
  CLUS_3           5           146
  CLUS_4           3            91
  CLUS_5           4            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NBN MUTATED        2      8      4      1      2
  NBN WILD-TYPE    116    128    111     39     69
D77V9, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           2           116
  CLUS_2           8           128
  CLUS_3           4           111
  CLUS_4           1            39
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NBN MUTATED        1      5      6      3      2
  NBN WILD-TYPE     47    104    124     98     90
D77V10, multiclass
        clus
vv       NBN MUTATED NBN WILD-TYPE
  CLUS_1           1            47
  CLUS_2           5           104
  CLUS_3           6           124
  CLUS_4           3            98
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(78) Variable = GLI1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLI1 MUTATED        3      2      1     19
  GLI1 WILD-TYPE    132     90    171    157
D78V1, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4           19            157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GLI1 MUTATED       14      3      3
  GLI1 WILD-TYPE    201    152    159
D78V2, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1           14            201
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLI1 MUTATED        5      9      2      3
  GLI1 WILD-TYPE    130    115    123     57
D78V3, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            9            115
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GLI1 MUTATED       11      6      2
  GLI1 WILD-TYPE    242     96     87
D78V4, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            6             96
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GLI1 MUTATED        7     12      4
  GLI1 WILD-TYPE    157    235    139
D78V5, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            7            157
  CLUS_2           12            235
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLI1 MUTATED        0      8      8      4      3
  GLI1 WILD-TYPE    121     96     83    117    114
D78V6, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            8             96
  CLUS_3            8             83
  CLUS_4            4            117
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GLI1 MUTATED        5     14      6
  GLI1 WILD-TYPE    154    237    159
D78V7, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           14            237
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLI1 MUTATED        1     10      9      3      2
  GLI1 WILD-TYPE    117    121    142     91     79
D78V8, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2           10            121
  CLUS_3            9            142
  CLUS_4            3             91
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLI1 MUTATED        3      5      3      0      7
  GLI1 WILD-TYPE    115    131    112     40     64
D78V9, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            131
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLI1 MUTATED        0      4      8      3      3
  GLI1 WILD-TYPE     48    105    122     98     89
D78V10, multiclass
        clus
vv       GLI1 MUTATED GLI1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            8            122
  CLUS_4            3             98
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(79) Variable = FAM9A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM9A MUTATED        3      1      0      9
  FAM9A WILD-TYPE    132     91    172    167
D79V1, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FAM9A MUTATED        7      0      2
  FAM9A WILD-TYPE    208    155    160
D79V2, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM9A MUTATED        3      5      3      2
  FAM9A WILD-TYPE    132    119    122     58
D79V3, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5             119
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FAM9A MUTATED        7      4      2
  FAM9A WILD-TYPE    246     98     87
D79V4, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             7             246
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FAM9A MUTATED        1      6      5
  FAM9A WILD-TYPE    163    241    138
D79V5, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM9A MUTATED        2      1      6      0      3
  FAM9A WILD-TYPE    119    103     85    121    114
D79V6, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FAM9A MUTATED        1      7      5
  FAM9A WILD-TYPE    158    244    160
D79V7, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM9A MUTATED        1      4      7      0      1
  FAM9A WILD-TYPE    117    127    144     94     80
D79V8, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM9A MUTATED        0      3      0      3      3
  FAM9A WILD-TYPE    118    133    115     37     68
D79V9, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             3              37
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM9A MUTATED        0      4      3      2      0
  FAM9A WILD-TYPE     48    105    127     99     92
D79V10, multiclass
        clus
vv       FAM9A MUTATED FAM9A WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(80) Variable = HDAC4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC4 MUTATED        2      3      8     24
  HDAC4 WILD-TYPE    133     89    164    152
D80V1, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3              89
  CLUS_3             8             164
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC4 MUTATED       23      8      4
  HDAC4 WILD-TYPE    192    147    158
D80V2, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1            23             192
  CLUS_2             8             147
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDAC4 MUTATED       16     13      4      0
  HDAC4 WILD-TYPE    119    111    121     60
D80V3, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1            16             119
  CLUS_2            13             111
  CLUS_3             4             121
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC4 MUTATED       23      6      4
  HDAC4 WILD-TYPE    230     96     85
D80V4, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1            23             230
  CLUS_2             6              96
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC4 MUTATED       11     21      4
  HDAC4 WILD-TYPE    153    226    139
D80V5, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1            11             153
  CLUS_2            21             226
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDAC4 MUTATED        3      4     19      8      2
  HDAC4 WILD-TYPE    118    100     72    113    115
D80V6, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3            19              72
  CLUS_4             8             113
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDAC4 MUTATED        9     23      5
  HDAC4 WILD-TYPE    150    228    160
D80V7, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1             9             150
  CLUS_2            23             228
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDAC4 MUTATED        3     15     10      8      1
  HDAC4 WILD-TYPE    115    116    141     86     80
D80V8, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            15             116
  CLUS_3            10             141
  CLUS_4             8              86
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDAC4 MUTATED        5     12      5      2      7
  HDAC4 WILD-TYPE    113    124    110     38     64
D80V9, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            12             124
  CLUS_3             5             110
  CLUS_4             2              38
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDAC4 MUTATED        1     15      7      1      7
  HDAC4 WILD-TYPE     47     94    123    100     85
D80V10, multiclass
        clus
vv       HDAC4 MUTATED HDAC4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2            15              94
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             7              85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(81) Variable = MOBKL1A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MOBKL1A MUTATED        0      0      0      6
  MOBKL1A WILD-TYPE    135     92    172    170
D81V1, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MOBKL1A MUTATED        4      0      1
  MOBKL1A WILD-TYPE    211    155    161
D81V2, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               4               211
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MOBKL1A MUTATED        2      3      1      0
  MOBKL1A WILD-TYPE    133    121    124     60
D81V3, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MOBKL1A MUTATED        4      1      1
  MOBKL1A WILD-TYPE    249    101     88
D81V4, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MOBKL1A MUTATED        1      5      1
  MOBKL1A WILD-TYPE    163    242    142
D81V5, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               1               163
  CLUS_2               5               242
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOBKL1A MUTATED        0      2      3      0      2
  MOBKL1A WILD-TYPE    121    102     88    121    115
D81V6, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MOBKL1A MUTATED        0      5      2
  MOBKL1A WILD-TYPE    159    246    163
D81V7, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               0               159
  CLUS_2               5               246
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOBKL1A MUTATED        0      4      3      0      0
  MOBKL1A WILD-TYPE    118    127    148     94     81
D81V8, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               127
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOBKL1A MUTATED        0      3      0      0      2
  MOBKL1A WILD-TYPE    118    133    115     40     69
D81V9, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOBKL1A MUTATED        0      3      2      0      0
  MOBKL1A WILD-TYPE     48    106    128    101     92
D81V10, multiclass
        clus
vv       MOBKL1A MUTATED MOBKL1A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(82) Variable = KIAA0664 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0664 MUTATED        4      1      3     19
  KIAA0664 WILD-TYPE    131     91    169    157
D82V1, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4               19                157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0664 MUTATED       15      4      4
  KIAA0664 WILD-TYPE    200    151    158
D82V2, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1               15                200
  CLUS_2                4                151
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0664 MUTATED       12      8      1      2
  KIAA0664 WILD-TYPE    123    116    124     58
D82V3, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1               12                123
  CLUS_2                8                116
  CLUS_3                1                124
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0664 MUTATED       21      0      2
  KIAA0664 WILD-TYPE    232    102     87
D82V4, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1               21                232
  CLUS_2                0                102
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0664 MUTATED        4     13      7
  KIAA0664 WILD-TYPE    160    234    136
D82V5, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               13                234
  CLUS_3                7                136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0664 MUTATED        3      7      9      1      4
  KIAA0664 WILD-TYPE    118     97     82    120    113
D82V6, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                7                 97
  CLUS_3                9                 82
  CLUS_4                1                120
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0664 MUTATED        4     17      6
  KIAA0664 WILD-TYPE    155    234    159
D82V7, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                4                155
  CLUS_2               17                234
  CLUS_3                6                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0664 MUTATED        3     10     11      1      2
  KIAA0664 WILD-TYPE    115    121    140     93     79
D82V8, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                3                115
  CLUS_2               10                121
  CLUS_3               11                140
  CLUS_4                1                 93
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0664 MUTATED        2      7      2      1      9
  KIAA0664 WILD-TYPE    116    129    113     39     62
D82V9, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                7                129
  CLUS_3                2                113
  CLUS_4                1                 39
  CLUS_5                9                 62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0664 MUTATED        2      8      7      3      1
  KIAA0664 WILD-TYPE     46    101    123     98     91
D82V10, multiclass
        clus
vv       KIAA0664 MUTATED KIAA0664 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                8                101
  CLUS_3                7                123
  CLUS_4                3                 98
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(83) Variable = CR2 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CR2 MUTATED        4      1      5     17
  CR2 WILD-TYPE    131     91    167    159
D83V1, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           4           131
  CLUS_2           1            91
  CLUS_3           5           167
  CLUS_4          17           159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR2 MUTATED       17      5      4
  CR2 WILD-TYPE    198    150    158
D83V2, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1          17           198
  CLUS_2           5           150
  CLUS_3           4           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CR2 MUTATED        8     12      0      2
  CR2 WILD-TYPE    127    112    125     58
D83V3, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           8           127
  CLUS_2          12           112
  CLUS_3           0           125
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR2 MUTATED       13      9      0
  CR2 WILD-TYPE    240     93     89
D83V4, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1          13           240
  CLUS_2           9            93
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR2 MUTATED        6     16      4
  CR2 WILD-TYPE    158    231    139
D83V5, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           6           158
  CLUS_2          16           231
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR2 MUTATED        0      6     13      3      4
  CR2 WILD-TYPE    121     98     78    118    113
D83V6, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           0           121
  CLUS_2           6            98
  CLUS_3          13            78
  CLUS_4           3           118
  CLUS_5           4           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR2 MUTATED        5     19      3
  CR2 WILD-TYPE    154    232    162
D83V7, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           5           154
  CLUS_2          19           232
  CLUS_3           3           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR2 MUTATED        2     12     10      2      1
  CR2 WILD-TYPE    116    119    141     92     80
D83V8, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           2           116
  CLUS_2          12           119
  CLUS_3          10           141
  CLUS_4           2            92
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR2 MUTATED        3     11      1      1      6
  CR2 WILD-TYPE    115    125    114     39     65
D83V9, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           3           115
  CLUS_2          11           125
  CLUS_3           1           114
  CLUS_4           1            39
  CLUS_5           6            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR2 MUTATED        1     11      7      1      2
  CR2 WILD-TYPE     47     98    123    100     90
D83V10, multiclass
        clus
vv       CR2 MUTATED CR2 WILD-TYPE
  CLUS_1           1            47
  CLUS_2          11            98
  CLUS_3           7           123
  CLUS_4           1           100
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(84) Variable = RTN2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RTN2 MUTATED        2      1      3     12
  RTN2 WILD-TYPE    133     91    169    164
D84V1, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RTN2 MUTATED        9      4      2
  RTN2 WILD-TYPE    206    151    160
D84V2, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            4            151
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RTN2 MUTATED        7      5      2      2
  RTN2 WILD-TYPE    128    119    123     58
D84V3, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            5            119
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RTN2 MUTATED       10      4      2
  RTN2 WILD-TYPE    243     98     87
D84V4, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            4             98
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RTN2 MUTATED        2      7      7
  RTN2 WILD-TYPE    162    240    136
D84V5, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            7            240
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTN2 MUTATED        2      3      6      2      3
  RTN2 WILD-TYPE    119    101     85    119    114
D84V6, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RTN2 MUTATED        4     11      3
  RTN2 WILD-TYPE    155    240    162
D84V7, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           11            240
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTN2 MUTATED        3      4      9      2      0
  RTN2 WILD-TYPE    115    127    142     92     81
D84V8, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            127
  CLUS_3            9            142
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTN2 MUTATED        3      1      1      1      8
  RTN2 WILD-TYPE    115    135    114     39     63
D84V9, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            8             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTN2 MUTATED        1      3      8      0      2
  RTN2 WILD-TYPE     47    106    122    101     90
D84V10, multiclass
        clus
vv       RTN2 MUTATED RTN2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            8            122
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(85) Variable = ABCC4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCC4 MUTATED        2      2      4     17
  ABCC4 WILD-TYPE    133     90    168    159
D85V1, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             4             168
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC4 MUTATED        8      2     10
  ABCC4 WILD-TYPE    207    153    152
D85V2, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3            10             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCC4 MUTATED        7     11      2      2
  ABCC4 WILD-TYPE    128    113    123     58
D85V3, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             7             128
  CLUS_2            11             113
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC4 MUTATED       14      7      1
  ABCC4 WILD-TYPE    239     95     88
D85V4, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             7              95
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC4 MUTATED        8     10      6
  ABCC4 WILD-TYPE    156    237    137
D85V5, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             8             156
  CLUS_2            10             237
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC4 MUTATED        3      4     10      3      4
  ABCC4 WILD-TYPE    118    100     81    118    113
D85V6, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3            10              81
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC4 MUTATED        4     15      6
  ABCC4 WILD-TYPE    155    236    159
D85V7, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            15             236
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC4 MUTATED        3      8      9      4      1
  ABCC4 WILD-TYPE    115    123    142     90     80
D85V8, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             123
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC4 MUTATED        3      4      2      3      6
  ABCC4 WILD-TYPE    115    132    113     37     65
D85V9, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC4 MUTATED        1      3      8      2      4
  ABCC4 WILD-TYPE     47    106    122     99     88
D85V10, multiclass
        clus
vv       ABCC4 MUTATED ABCC4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             8             122
  CLUS_4             2              99
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(86) Variable = ALDH2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALDH2 MUTATED        0      0      2     13
  ALDH2 WILD-TYPE    135     92    170    163
D86V1, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALDH2 MUTATED       10      1      1
  ALDH2 WILD-TYPE    205    154    161
D86V2, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALDH2 MUTATED        5      5      0      2
  ALDH2 WILD-TYPE    130    119    125     58
D86V3, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALDH2 MUTATED       10      2      0
  ALDH2 WILD-TYPE    243    100     89
D86V4, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALDH2 MUTATED        2      9      3
  ALDH2 WILD-TYPE    162    238    140
D86V5, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH2 MUTATED        0      2     10      1      1
  ALDH2 WILD-TYPE    121    102     81    120    116
D86V6, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3            10              81
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALDH2 MUTATED        2     11      2
  ALDH2 WILD-TYPE    157    240    163
D86V7, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH2 MUTATED        1      6      7      1      0
  ALDH2 WILD-TYPE    117    125    144     93     81
D86V8, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH2 MUTATED        1      6      1      0      3
  ALDH2 WILD-TYPE    117    130    114     40     68
D86V9, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH2 MUTATED        0      4      6      0      1
  ALDH2 WILD-TYPE     48    105    124    101     91
D86V10, multiclass
        clus
vv       ALDH2 MUTATED ALDH2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(87) Variable = IWS1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IWS1 MUTATED        3      0      1     12
  IWS1 WILD-TYPE    132     92    171    164
D87V1, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IWS1 MUTATED       10      1      2
  IWS1 WILD-TYPE    205    154    160
D87V2, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IWS1 MUTATED        6      6      1      0
  IWS1 WILD-TYPE    129    118    124     60
D87V3, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            6            118
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IWS1 MUTATED        8      5      0
  IWS1 WILD-TYPE    245     97     89
D87V4, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IWS1 MUTATED        3      8      3
  IWS1 WILD-TYPE    161    239    140
D87V5, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            8            239
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IWS1 MUTATED        0      2      7      2      3
  IWS1 WILD-TYPE    121    102     84    119    114
D87V6, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IWS1 MUTATED        3     11      2
  IWS1 WILD-TYPE    156    240    163
D87V7, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           11            240
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IWS1 MUTATED        0      8      6      1      1
  IWS1 WILD-TYPE    118    123    145     93     80
D87V8, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            8            123
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IWS1 MUTATED        0      2      1      2      4
  IWS1 WILD-TYPE    118    134    114     38     67
D87V9, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IWS1 MUTATED        0      4      4      0      1
  IWS1 WILD-TYPE     48    105    126    101     91
D87V10, multiclass
        clus
vv       IWS1 MUTATED IWS1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(88) Variable = SLC12A9 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC12A9 MUTATED        3      1      0     17
  SLC12A9 WILD-TYPE    132     91    172    159
D88V1, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4              17               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A9 MUTATED       11      1      3
  SLC12A9 WILD-TYPE    204    154    159
D88V2, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC12A9 MUTATED       12      3      3      2
  SLC12A9 WILD-TYPE    123    121    122     58
D88V3, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1              12               123
  CLUS_2               3               121
  CLUS_3               3               122
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A9 MUTATED       15      1      4
  SLC12A9 WILD-TYPE    238    101     85
D88V4, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1              15               238
  CLUS_2               1               101
  CLUS_3               4                85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A9 MUTATED        0     11      8
  SLC12A9 WILD-TYPE    164    236    135
D88V5, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               0               164
  CLUS_2              11               236
  CLUS_3               8               135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A9 MUTATED        2      4      7      0      6
  SLC12A9 WILD-TYPE    119    100     84    121    111
D88V6, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               4               100
  CLUS_3               7                84
  CLUS_4               0               121
  CLUS_5               6               111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A9 MUTATED        2     13      6
  SLC12A9 WILD-TYPE    157    238    159
D88V7, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              13               238
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A9 MUTATED        3      7      8      0      3
  SLC12A9 WILD-TYPE    115    124    143     94     78
D88V8, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               7               124
  CLUS_3               8               143
  CLUS_4               0                94
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A9 MUTATED        0      7      2      1      4
  SLC12A9 WILD-TYPE    118    129    113     39     67
D88V9, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               7               129
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A9 MUTATED        0      7      4      3      0
  SLC12A9 WILD-TYPE     48    102    126     98     92
D88V10, multiclass
        clus
vv       SLC12A9 MUTATED SLC12A9 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               7               102
  CLUS_3               4               126
  CLUS_4               3                98
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(89) Variable = IL2RG MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL2RG MUTATED        1      0      3      9
  IL2RG WILD-TYPE    134     92    169    167
D89V1, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL2RG MUTATED        6      2      3
  IL2RG WILD-TYPE    209    153    159
D89V2, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL2RG MUTATED        5      5      1      0
  IL2RG WILD-TYPE    130    119    124     60
D89V3, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL2RG MUTATED        8      2      1
  IL2RG WILD-TYPE    245    100     88
D89V4, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL2RG MUTATED        5      4      2
  IL2RG WILD-TYPE    159    243    141
D89V5, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             5             159
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL2RG MUTATED        2      2      2      4      1
  IL2RG WILD-TYPE    119    102     89    117    116
D89V6, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             4             117
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL2RG MUTATED        4      7      2
  IL2RG WILD-TYPE    155    244    163
D89V7, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             4             155
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL2RG MUTATED        0      4      5      3      1
  IL2RG WILD-TYPE    118    127    146     91     80
D89V8, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL2RG MUTATED        3      2      0      2      3
  IL2RG WILD-TYPE    115    134    115     38     68
D89V9, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             3             115
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL2RG MUTATED        2      2      2      1      3
  IL2RG WILD-TYPE     46    107    128    100     89
D89V10, multiclass
        clus
vv       IL2RG MUTATED IL2RG WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(90) Variable = YY1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YY1 MUTATED        1      1      1      9
  YY1 WILD-TYPE    134     91    171    167
D90V1, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           1           134
  CLUS_2           1            91
  CLUS_3           1           171
  CLUS_4           9           167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  YY1 MUTATED        8      2      0
  YY1 WILD-TYPE    207    153    162
D90V2, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           8           207
  CLUS_2           2           153
  CLUS_3           0           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YY1 MUTATED        2      4      4      0
  YY1 WILD-TYPE    133    120    121     60
D90V3, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           2           133
  CLUS_2           4           120
  CLUS_3           4           121
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  YY1 MUTATED        6      2      2
  YY1 WILD-TYPE    247    100     87
D90V4, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           6           247
  CLUS_2           2           100
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  YY1 MUTATED        3      5      4
  YY1 WILD-TYPE    161    242    139
D90V5, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           3           161
  CLUS_2           5           242
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YY1 MUTATED        1      1      6      2      2
  YY1 WILD-TYPE    120    103     85    119    115
D90V6, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           1           120
  CLUS_2           1           103
  CLUS_3           6            85
  CLUS_4           2           119
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  YY1 MUTATED        3      6      3
  YY1 WILD-TYPE    156    245    162
D90V7, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           3           156
  CLUS_2           6           245
  CLUS_3           3           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YY1 MUTATED        0      4      5      2      1
  YY1 WILD-TYPE    118    127    146     92     80
D90V8, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           0           118
  CLUS_2           4           127
  CLUS_3           5           146
  CLUS_4           2            92
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YY1 MUTATED        3      3      1      2      1
  YY1 WILD-TYPE    115    133    114     38     70
D90V9, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           3           115
  CLUS_2           3           133
  CLUS_3           1           114
  CLUS_4           2            38
  CLUS_5           1            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YY1 MUTATED        0      3      4      1      2
  YY1 WILD-TYPE     48    106    126    100     90
D90V10, multiclass
        clus
vv       YY1 MUTATED YY1 WILD-TYPE
  CLUS_1           0            48
  CLUS_2           3           106
  CLUS_3           4           126
  CLUS_4           1           100
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(91) Variable = OPTN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OPTN MUTATED        1      1      4     10
  OPTN WILD-TYPE    134     91    168    166
D91V1, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            4            168
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OPTN MUTATED        8      3      2
  OPTN WILD-TYPE    207    152    160
D91V2, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OPTN MUTATED        6      7      1      1
  OPTN WILD-TYPE    129    117    124     59
D91V3, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            6            129
  CLUS_2            7            117
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OPTN MUTATED       11      4      0
  OPTN WILD-TYPE    242     98     89
D91V4, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1           11            242
  CLUS_2            4             98
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OPTN MUTATED        4      8      4
  OPTN WILD-TYPE    160    239    139
D91V5, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            4            160
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPTN MUTATED        1      4      7      2      2
  OPTN WILD-TYPE    120    100     84    119    115
D91V6, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            1            120
  CLUS_2            4            100
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OPTN MUTATED        2     10      4
  OPTN WILD-TYPE    157    241    161
D91V7, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            2            157
  CLUS_2           10            241
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPTN MUTATED        2      5      7      2      0
  OPTN WILD-TYPE    116    126    144     92     81
D91V8, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            7            144
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPTN MUTATED        2      2      3      0      5
  OPTN WILD-TYPE    116    134    112     40     66
D91V9, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPTN MUTATED        1      3      4      2      2
  OPTN WILD-TYPE     47    106    126     99     90
D91V10, multiclass
        clus
vv       OPTN MUTATED OPTN WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(92) Variable = GRK4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRK4 MUTATED        0      2      2      8
  GRK4 WILD-TYPE    135     90    170    168
D92V1, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GRK4 MUTATED        7      2      2
  GRK4 WILD-TYPE    208    153    160
D92V2, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRK4 MUTATED        4      5      1      1
  GRK4 WILD-TYPE    131    119    124     59
D92V3, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5            119
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GRK4 MUTATED        9      1      1
  GRK4 WILD-TYPE    244    101     88
D92V4, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GRK4 MUTATED        2      6      3
  GRK4 WILD-TYPE    162    241    140
D92V5, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            6            241
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRK4 MUTATED        2      1      5      1      2
  GRK4 WILD-TYPE    119    103     86    120    115
D92V6, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GRK4 MUTATED        1     11      1
  GRK4 WILD-TYPE    158    240    164
D92V7, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           11            240
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRK4 MUTATED        0      8      4      1      0
  GRK4 WILD-TYPE    118    123    147     93     81
D92V8, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            8            123
  CLUS_3            4            147
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRK4 MUTATED        1      5      0      1      4
  GRK4 WILD-TYPE    117    131    115     39     67
D92V9, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRK4 MUTATED        0      5      5      0      1
  GRK4 WILD-TYPE     48    104    125    101     91
D92V10, multiclass
        clus
vv       GRK4 MUTATED GRK4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(93) Variable = CTCF MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTCF MUTATED        1      0      0     15
  CTCF WILD-TYPE    134     92    172    161
D93V1, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTCF MUTATED        9      0      6
  CTCF WILD-TYPE    206    155    156
D93V2, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            9            206
  CLUS_2            0            155
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTCF MUTATED        2      6      4      1
  CTCF WILD-TYPE    133    118    121     59
D93V3, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            2            133
  CLUS_2            6            118
  CLUS_3            4            121
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTCF MUTATED        6      3      4
  CTCF WILD-TYPE    247     99     85
D93V4, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            6            247
  CLUS_2            3             99
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTCF MUTATED        2      7      7
  CTCF WILD-TYPE    162    240    136
D93V5, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            2            162
  CLUS_2            7            240
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTCF MUTATED        2      1      8      0      5
  CTCF WILD-TYPE    119    103     83    121    112
D93V6, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            8             83
  CLUS_4            0            121
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTCF MUTATED        0     10      6
  CTCF WILD-TYPE    159    241    159
D93V7, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            0            159
  CLUS_2           10            241
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTCF MUTATED        0      6      6      0      4
  CTCF WILD-TYPE    118    125    145     94     77
D93V8, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            6            145
  CLUS_4            0             94
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTCF MUTATED        0      5      2      1      5
  CTCF WILD-TYPE    118    131    113     39     66
D93V9, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTCF MUTATED        1      3      6      3      0
  CTCF WILD-TYPE     47    106    124     98     92
D93V10, multiclass
        clus
vv       CTCF MUTATED CTCF WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(94) Variable = EIF5B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF5B MUTATED        2      1      4     24
  EIF5B WILD-TYPE    133     91    168    152
D94V1, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EIF5B MUTATED       18      5      3
  EIF5B WILD-TYPE    197    150    159
D94V2, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1            18             197
  CLUS_2             5             150
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF5B MUTATED        8     13      4      2
  EIF5B WILD-TYPE    127    111    121     58
D94V3, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             8             127
  CLUS_2            13             111
  CLUS_3             4             121
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EIF5B MUTATED       17      7      3
  EIF5B WILD-TYPE    236     95     86
D94V4, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1            17             236
  CLUS_2             7              95
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EIF5B MUTATED        9     14      6
  EIF5B WILD-TYPE    155    233    137
D94V5, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             9             155
  CLUS_2            14             233
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5B MUTATED        2      4     14      5      4
  EIF5B WILD-TYPE    119    100     77    116    113
D94V6, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3            14              77
  CLUS_4             5             116
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EIF5B MUTATED        4     20      7
  EIF5B WILD-TYPE    155    231    158
D94V7, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             4             155
  CLUS_2            20             231
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5B MUTATED        0     11     13      4      3
  EIF5B WILD-TYPE    118    120    138     90     78
D94V8, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             0             118
  CLUS_2            11             120
  CLUS_3            13             138
  CLUS_4             4              90
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5B MUTATED        2      6      4      2      8
  EIF5B WILD-TYPE    116    130    111     38     63
D94V9, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             4             111
  CLUS_4             2              38
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5B MUTATED        1      7     10      1      3
  EIF5B WILD-TYPE     47    102    120    100     89
D94V10, multiclass
        clus
vv       EIF5B MUTATED EIF5B WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3            10             120
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(95) Variable = RTKN2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RTKN2 MUTATED        1      1      2     10
  RTKN2 WILD-TYPE    134     91    170    166
D95V1, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RTKN2 MUTATED        8      1      3
  RTKN2 WILD-TYPE    207    154    159
D95V2, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RTKN2 MUTATED        7      2      1      1
  RTKN2 WILD-TYPE    128    122    124     59
D95V3, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RTKN2 MUTATED        8      1      2
  RTKN2 WILD-TYPE    245    101     87
D95V4, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RTKN2 MUTATED        3      5      6
  RTKN2 WILD-TYPE    161    242    137
D95V5, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             5             242
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTKN2 MUTATED        1      2      4      2      5
  RTKN2 WILD-TYPE    120    102     87    119    112
D95V6, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RTKN2 MUTATED        3      8      3
  RTKN2 WILD-TYPE    156    243    162
D95V7, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTKN2 MUTATED        2      4      7      1      0
  RTKN2 WILD-TYPE    116    127    144     93     81
D95V8, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTKN2 MUTATED        1      5      1      0      4
  RTKN2 WILD-TYPE    117    131    114     40     67
D95V9, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RTKN2 MUTATED        0      4      5      1      1
  RTKN2 WILD-TYPE     48    105    125    100     91
D95V10, multiclass
        clus
vv       RTKN2 MUTATED RTKN2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(96) Variable = ZNF48 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF48 MUTATED        1      0      0     12
  ZNF48 WILD-TYPE    134     92    172    164
D96V1, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF48 MUTATED        8      0      3
  ZNF48 WILD-TYPE    207    155    159
D96V2, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF48 MUTATED        6      4      1      0
  ZNF48 WILD-TYPE    129    120    124     60
D96V3, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF48 MUTATED        7      2      2
  ZNF48 WILD-TYPE    246    100     87
D96V4, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF48 MUTATED        2      6      5
  ZNF48 WILD-TYPE    162    241    138
D96V5, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF48 MUTATED        1      4      6      0      2
  ZNF48 WILD-TYPE    120    100     85    121    115
D96V6, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF48 MUTATED        1      9      3
  ZNF48 WILD-TYPE    158    242    162
D96V7, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF48 MUTATED        1      6      4      0      2
  ZNF48 WILD-TYPE    117    125    147     94     79
D96V8, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF48 MUTATED        0      4      2      0      3
  ZNF48 WILD-TYPE    118    132    113     40     68
D96V9, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF48 MUTATED        0      4      3      2      0
  ZNF48 WILD-TYPE     48    105    127     99     92
D96V10, multiclass
        clus
vv       ZNF48 MUTATED ZNF48 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(97) Variable = INF2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        3      1      7     15
  INF2 WILD-TYPE    132     91    165    161
D97V1, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1             91
  CLUS_3            7            165
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED       12      6      5
  INF2 WILD-TYPE    203    149    157
D97V2, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            6            149
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INF2 MUTATED        5      9      4      3
  INF2 WILD-TYPE    130    115    121     57
D97V3, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            9            115
  CLUS_3            4            121
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED       11      6      4
  INF2 WILD-TYPE    242     96     85
D97V4, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            6             96
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        8     13      5
  INF2 WILD-TYPE    156    234    138
D97V5, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            8            156
  CLUS_2           13            234
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INF2 MUTATED        5      5      8      5      3
  INF2 WILD-TYPE    116     99     83    116    114
D97V6, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            5            116
  CLUS_2            5             99
  CLUS_3            8             83
  CLUS_4            5            116
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INF2 MUTATED        8     12      6
  INF2 WILD-TYPE    151    239    159
D97V7, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            8            151
  CLUS_2           12            239
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INF2 MUTATED        3     10      7      5      1
  INF2 WILD-TYPE    115    121    144     89     80
D97V8, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           10            121
  CLUS_3            7            144
  CLUS_4            5             89
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INF2 MUTATED        5      6      4      1      4
  INF2 WILD-TYPE    113    130    111     39     67
D97V9, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            6            130
  CLUS_3            4            111
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INF2 MUTATED        0      6      6      3      5
  INF2 WILD-TYPE     48    103    124     98     87
D97V10, multiclass
        clus
vv       INF2 MUTATED INF2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            6            124
  CLUS_4            3             98
  CLUS_5            5             87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(98) Variable = NAPEPLD MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAPEPLD MUTATED        2      1      0      9
  NAPEPLD WILD-TYPE    133     91    172    167
D98V1, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NAPEPLD MUTATED        7      1      3
  NAPEPLD WILD-TYPE    208    154    159
D98V2, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               7               208
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAPEPLD MUTATED        3      4      2      1
  NAPEPLD WILD-TYPE    132    120    123     59
D98V3, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               3               132
  CLUS_2               4               120
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NAPEPLD MUTATED        4      4      2
  NAPEPLD WILD-TYPE    249     98     87
D98V4, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               4               249
  CLUS_2               4                98
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NAPEPLD MUTATED        1      9      2
  NAPEPLD WILD-TYPE    163    238    141
D98V5, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAPEPLD MUTATED        2      2      5      0      3
  NAPEPLD WILD-TYPE    119    102     86    121    114
D98V6, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               5                86
  CLUS_4               0               121
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NAPEPLD MUTATED        1      8      3
  NAPEPLD WILD-TYPE    158    243    162
D98V7, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               1               158
  CLUS_2               8               243
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAPEPLD MUTATED        1      4      5      0      2
  NAPEPLD WILD-TYPE    117    127    146     94     79
D98V8, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAPEPLD MUTATED        1      2      2      0      5
  NAPEPLD WILD-TYPE    117    134    113     40     66
D98V9, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAPEPLD MUTATED        1      3      5      1      0
  NAPEPLD WILD-TYPE     47    106    125    100     92
D98V10, multiclass
        clus
vv       NAPEPLD MUTATED NAPEPLD WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(99) Variable = ELF3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ELF3 MUTATED        2      1      0     10
  ELF3 WILD-TYPE    133     91    172    166
D99V1, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELF3 MUTATED        7      0      3
  ELF3 WILD-TYPE    208    155    159
D99V2, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ELF3 MUTATED        3      7      1      2
  ELF3 WILD-TYPE    132    117    124     58
D99V3, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            7            117
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELF3 MUTATED        7      6      0
  ELF3 WILD-TYPE    246     96     89
D99V4, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            6             96
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELF3 MUTATED        1      7      5
  ELF3 WILD-TYPE    163    240    138
D99V5, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELF3 MUTATED        0      1      8      1      3
  ELF3 WILD-TYPE    121    103     83    120    114
D99V6, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            8             83
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELF3 MUTATED        0     12      2
  ELF3 WILD-TYPE    159    239    163
D99V7, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           12            239
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELF3 MUTATED        1      3     10      0      0
  ELF3 WILD-TYPE    117    128    141     94     81
D99V8, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3           10            141
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELF3 MUTATED        0      3      0      1      6
  ELF3 WILD-TYPE    118    133    115     39     65
D99V9, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELF3 MUTATED        0      3      6      1      0
  ELF3 WILD-TYPE     48    106    124    100     92
D99V10, multiclass
        clus
vv       ELF3 MUTATED ELF3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(100) Variable = TTF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTF1 MUTATED        3      2      2     13
  TTF1 WILD-TYPE    132     90    170    163
D100V1, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTF1 MUTATED       12      2      1
  TTF1 WILD-TYPE    203    153    161
D100V2, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTF1 MUTATED        5      7      2      1
  TTF1 WILD-TYPE    130    117    123     59
D100V3, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTF1 MUTATED       10      3      2
  TTF1 WILD-TYPE    243     99     87
D100V4, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            3             99
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTF1 MUTATED        4     11      3
  TTF1 WILD-TYPE    160    236    140
D100V5, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           11            236
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTF1 MUTATED        3      4      5      2      4
  TTF1 WILD-TYPE    118    100     86    119    113
D100V6, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            4            100
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTF1 MUTATED        4     13      3
  TTF1 WILD-TYPE    155    238    162
D100V7, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           13            238
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTF1 MUTATED        3      8      6      1      2
  TTF1 WILD-TYPE    115    123    145     93     79
D100V8, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            8            123
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTF1 MUTATED        2      5      2      1      4
  TTF1 WILD-TYPE    116    131    113     39     67
D100V9, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTF1 MUTATED        2      6      4      1      1
  TTF1 WILD-TYPE     46    103    126    100     91
D100V10, multiclass
        clus
vv       TTF1 MUTATED TTF1 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(101) Variable = DDC MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDC MUTATED        0      1      1     10
  DDC WILD-TYPE    135     91    171    166
D101V1, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           0           135
  CLUS_2           1            91
  CLUS_3           1           171
  CLUS_4          10           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDC MUTATED        6      1      2
  DDC WILD-TYPE    209    154    160
D101V2, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           6           209
  CLUS_2           1           154
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDC MUTATED        3      7      0      1
  DDC WILD-TYPE    132    117    125     59
D101V3, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           3           132
  CLUS_2           7           117
  CLUS_3           0           125
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDC MUTATED        7      3      1
  DDC WILD-TYPE    246     99     88
D101V4, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           7           246
  CLUS_2           3            99
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDC MUTATED        1      6      3
  DDC WILD-TYPE    163    241    140
D101V5, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           1           163
  CLUS_2           6           241
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDC MUTATED        0      4      3      0      3
  DDC WILD-TYPE    121    100     88    121    114
D101V6, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           0           121
  CLUS_2           4           100
  CLUS_3           3            88
  CLUS_4           0           121
  CLUS_5           3           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDC MUTATED        2      9      1
  DDC WILD-TYPE    157    242    164
D101V7, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           2           157
  CLUS_2           9           242
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDC MUTATED        1      3      8      0      0
  DDC WILD-TYPE    117    128    143     94     81
D101V8, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           1           117
  CLUS_2           3           128
  CLUS_3           8           143
  CLUS_4           0            94
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDC MUTATED        1      4      0      1      3
  DDC WILD-TYPE    117    132    115     39     68
D101V9, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           1           117
  CLUS_2           4           132
  CLUS_3           0           115
  CLUS_4           1            39
  CLUS_5           3            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDC MUTATED        0      3      6      0      0
  DDC WILD-TYPE     48    106    124    101     92
D101V10, multiclass
        clus
vv       DDC MUTATED DDC WILD-TYPE
  CLUS_1           0            48
  CLUS_2           3           106
  CLUS_3           6           124
  CLUS_4           0           101
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(102) Variable = KLHDC5 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLHDC5 MUTATED        2      0      2      9
  KLHDC5 WILD-TYPE    133     92    170    167
D102V1, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHDC5 MUTATED        9      0      2
  KLHDC5 WILD-TYPE    206    155    160
D102V2, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLHDC5 MUTATED        6      4      1      0
  KLHDC5 WILD-TYPE    129    120    124     60
D102V3, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHDC5 MUTATED        9      2      0
  KLHDC5 WILD-TYPE    244    100     89
D102V4, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHDC5 MUTATED        2      8      2
  KLHDC5 WILD-TYPE    162    239    141
D102V5, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              8              239
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC5 MUTATED        1      2      6      1      2
  KLHDC5 WILD-TYPE    120    102     85    120    115
D102V6, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHDC5 MUTATED        1     10      2
  KLHDC5 WILD-TYPE    158    241    163
D102V7, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             10              241
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC5 MUTATED        1      8      3      0      1
  KLHDC5 WILD-TYPE    117    123    148     94     80
D102V8, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              123
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC5 MUTATED        1      4      0      1      4
  KLHDC5 WILD-TYPE    117    132    115     39     67
D102V9, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC5 MUTATED        1      4      4      1      0
  KLHDC5 WILD-TYPE     47    105    126    100     92
D102V10, multiclass
        clus
vv       KLHDC5 MUTATED KLHDC5 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(103) Variable = FBXO21 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO21 MUTATED        1      4      2     10
  FBXO21 WILD-TYPE    134     88    170    166
D103V1, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              4               88
  CLUS_3              2              170
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO21 MUTATED        6      1      3
  FBXO21 WILD-TYPE    209    154    159
D103V2, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO21 MUTATED        3      7      3      2
  FBXO21 WILD-TYPE    132    117    122     58
D103V3, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              7              117
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO21 MUTATED        8      4      3
  FBXO21 WILD-TYPE    245     98     86
D103V4, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO21 MUTATED        1      9      6
  FBXO21 WILD-TYPE    163    238    137
D103V5, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              9              238
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO21 MUTATED        1      3      6      1      5
  FBXO21 WILD-TYPE    120    101     85    120    112
D103V6, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO21 MUTATED        3     10      4
  FBXO21 WILD-TYPE    156    241    161
D103V7, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             10              241
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO21 MUTATED        4      2      8      1      2
  FBXO21 WILD-TYPE    114    129    143     93     79
D103V8, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              2              129
  CLUS_3              8              143
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO21 MUTATED        1      3      3      1      2
  FBXO21 WILD-TYPE    117    133    112     39     69
D103V9, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO21 MUTATED        0      3      4      2      1
  FBXO21 WILD-TYPE     48    106    126     99     91
D103V10, multiclass
        clus
vv       FBXO21 MUTATED FBXO21 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(104) Variable = IRF2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRF2 MUTATED        3      0      1     15
  IRF2 WILD-TYPE    132     92    171    161
D104V1, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRF2 MUTATED        9      0      5
  IRF2 WILD-TYPE    206    155    157
D104V2, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            0            155
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRF2 MUTATED        3     10      3      2
  IRF2 WILD-TYPE    132    114    122     58
D104V3, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2           10            114
  CLUS_3            3            122
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRF2 MUTATED        8      8      2
  IRF2 WILD-TYPE    245     94     87
D104V4, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            8             94
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRF2 MUTATED        1      7      7
  IRF2 WILD-TYPE    163    240    136
D104V5, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2 MUTATED        2      3      6      0      4
  IRF2 WILD-TYPE    119    101     85    121    113
D104V6, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRF2 MUTATED        0     14      5
  IRF2 WILD-TYPE    159    237    160
D104V7, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           14            237
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2 MUTATED        0      4     13      0      2
  IRF2 WILD-TYPE    118    127    138     94     79
D104V8, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3           13            138
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2 MUTATED        0      4      1      2      6
  IRF2 WILD-TYPE    118    132    114     38     65
D104V9, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2 MUTATED        1      5      6      1      0
  IRF2 WILD-TYPE     47    104    124    100     92
D104V10, multiclass
        clus
vv       IRF2 MUTATED IRF2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            6            124
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(105) Variable = RHOQ MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RHOQ MUTATED        0      0      0      5
  RHOQ WILD-TYPE    135     92    172    171
D105V1, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOQ MUTATED        3      0      0
  RHOQ WILD-TYPE    212    155    162
D105V2, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RHOQ MUTATED        0      2      1      0
  RHOQ WILD-TYPE    135    122    124     60
D105V3, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOQ MUTATED        1      1      1
  RHOQ WILD-TYPE    252    101     88
D105V4, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            1            252
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOQ MUTATED        1      3      1
  RHOQ WILD-TYPE    163    244    142
D105V5, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOQ MUTATED        0      2      2      0      1
  RHOQ WILD-TYPE    121    102     89    121    116
D105V6, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RHOQ MUTATED        1      3      1
  RHOQ WILD-TYPE    158    248    164
D105V7, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOQ MUTATED        1      3      1      0      0
  RHOQ WILD-TYPE    117    128    150     94     81
D105V8, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOQ MUTATED        0      3      0      0      0
  RHOQ WILD-TYPE    118    133    115     40     71
D105V9, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RHOQ MUTATED        0      3      0      0      0
  RHOQ WILD-TYPE     48    106    130    101     92
D105V10, multiclass
        clus
vv       RHOQ MUTATED RHOQ WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            0            130
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(106) Variable = GRINA MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRINA MUTATED        1      0      1      8
  GRINA WILD-TYPE    134     92    171    168
D106V1, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRINA MUTATED        5      1      3
  GRINA WILD-TYPE    210    154    159
D106V2, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRINA MUTATED        5      4      0      1
  GRINA WILD-TYPE    130    120    125     59
D106V3, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRINA MUTATED        8      2      0
  GRINA WILD-TYPE    245    100     89
D106V4, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRINA MUTATED        2      5      2
  GRINA WILD-TYPE    162    242    141
D106V5, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRINA MUTATED        0      2      5      1      1
  GRINA WILD-TYPE    121    102     86    120    116
D106V6, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GRINA MUTATED        0      6      4
  GRINA WILD-TYPE    159    245    161
D106V7, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRINA MUTATED        0      3      5      1      1
  GRINA WILD-TYPE    118    128    146     93     80
D106V8, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRINA MUTATED        0      2      2      2      3
  GRINA WILD-TYPE    118    134    113     38     68
D106V9, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRINA MUTATED        0      3      4      1      1
  GRINA WILD-TYPE     48    106    126    100     91
D106V10, multiclass
        clus
vv       GRINA MUTATED GRINA WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(107) Variable = EPHX1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHX1 MUTATED        2      1      0      9
  EPHX1 WILD-TYPE    133     91    172    167
D107V1, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHX1 MUTATED        6      1      2
  EPHX1 WILD-TYPE    209    154    160
D107V2, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHX1 MUTATED        3      4      1      1
  EPHX1 WILD-TYPE    132    120    124     59
D107V3, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHX1 MUTATED        6      3      0
  EPHX1 WILD-TYPE    247     99     89
D107V4, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHX1 MUTATED        2      8      0
  EPHX1 WILD-TYPE    162    239    143
D107V5, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHX1 MUTATED        1      3      4      1      1
  EPHX1 WILD-TYPE    120    101     87    120    116
D107V6, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHX1 MUTATED        1     10      1
  EPHX1 WILD-TYPE    158    241    164
D107V7, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHX1 MUTATED        0      7      4      1      0
  EPHX1 WILD-TYPE    118    124    147     93     81
D107V8, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHX1 MUTATED        1      3      0      1      4
  EPHX1 WILD-TYPE    117    133    115     39     67
D107V9, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHX1 MUTATED        0      6      2      0      1
  EPHX1 WILD-TYPE     48    103    128    101     91
D107V10, multiclass
        clus
vv       EPHX1 MUTATED EPHX1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(108) Variable = C13ORF33 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C13ORF33 MUTATED        0      1      0      7
  C13ORF33 WILD-TYPE    135     91    172    169
D108V1, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C13ORF33 MUTATED        8      0      0
  C13ORF33 WILD-TYPE    207    155    162
D108V2, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                8                207
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C13ORF33 MUTATED        2      4      0      0
  C13ORF33 WILD-TYPE    133    120    125     60
D108V3, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                4                120
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C13ORF33 MUTATED        4      2      0
  C13ORF33 WILD-TYPE    249    100     89
D108V4, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C13ORF33 MUTATED        0      6      2
  C13ORF33 WILD-TYPE    164    241    141
D108V5, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                6                241
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C13ORF33 MUTATED        0      0      7      0      1
  C13ORF33 WILD-TYPE    121    104     84    121    116
D108V6, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                0                104
  CLUS_3                7                 84
  CLUS_4                0                121
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C13ORF33 MUTATED        1      5      2
  C13ORF33 WILD-TYPE    158    246    163
D108V7, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                5                246
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C13ORF33 MUTATED        0      4      3      0      1
  C13ORF33 WILD-TYPE    118    127    148     94     80
D108V8, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                127
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C13ORF33 MUTATED        0      3      2      0      2
  C13ORF33 WILD-TYPE    118    133    113     40     69
D108V9, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                133
  CLUS_3                2                113
  CLUS_4                0                 40
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C13ORF33 MUTATED        0      3      3      1      0
  C13ORF33 WILD-TYPE     48    106    127    100     92
D108V10, multiclass
        clus
vv       C13ORF33 MUTATED C13ORF33 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                3                127
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(109) Variable = C19ORF40 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C19ORF40 MUTATED        1      1      0      5
  C19ORF40 WILD-TYPE    134     91    172    171
D109V1, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                5                171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF40 MUTATED        2      1      1
  C19ORF40 WILD-TYPE    213    154    161
D109V2, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                2                213
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C19ORF40 MUTATED        1      4      0      2
  C19ORF40 WILD-TYPE    134    120    125     58
D109V3, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                4                120
  CLUS_3                0                125
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF40 MUTATED        5      2      0
  C19ORF40 WILD-TYPE    248    100     89
D109V4, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF40 MUTATED        0      4      2
  C19ORF40 WILD-TYPE    164    243    141
D109V5, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                4                243
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF40 MUTATED        0      2      2      0      2
  C19ORF40 WILD-TYPE    121    102     89    121    115
D109V6, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                2                 89
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF40 MUTATED        0      4      2
  C19ORF40 WILD-TYPE    159    247    163
D109V7, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF40 MUTATED        0      1      5      0      0
  C19ORF40 WILD-TYPE    118    130    146     94     81
D109V8, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                130
  CLUS_3                5                146
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF40 MUTATED        0      2      0      0      1
  C19ORF40 WILD-TYPE    118    134    115     40     70
D109V9, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF40 MUTATED        0      1      2      0      0
  C19ORF40 WILD-TYPE     48    108    128    101     92
D109V10, multiclass
        clus
vv       C19ORF40 MUTATED C19ORF40 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(110) Variable = MRE11A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRE11A MUTATED        2      0      1      6
  MRE11A WILD-TYPE    133     92    171    170
D110V1, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRE11A MUTATED        3      2      2
  MRE11A WILD-TYPE    212    153    160
D110V2, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              3              212
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRE11A MUTATED        5      4      0      0
  MRE11A WILD-TYPE    130    120    125     60
D110V3, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRE11A MUTATED        5      2      2
  MRE11A WILD-TYPE    248    100     87
D110V4, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              5              248
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRE11A MUTATED        3      3      2
  MRE11A WILD-TYPE    161    244    141
D110V5, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              3              161
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRE11A MUTATED        1      2      2      1      2
  MRE11A WILD-TYPE    120    102     89    120    115
D110V6, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRE11A MUTATED        3      6      0
  MRE11A WILD-TYPE    156    245    165
D110V7, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              3              156
  CLUS_2              6              245
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRE11A MUTATED        2      2      4      1      0
  MRE11A WILD-TYPE    116    129    147     93     81
D110V8, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              2              116
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRE11A MUTATED        1      3      0      1      2
  MRE11A WILD-TYPE    117    133    115     39     69
D110V9, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRE11A MUTATED        1      1      4      0      1
  MRE11A WILD-TYPE     47    108    126    101     91
D110V10, multiclass
        clus
vv       MRE11A MUTATED MRE11A WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(111) Variable = ERF MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERF MUTATED        1      1      1     14
  ERF WILD-TYPE    134     91    171    162
D111V1, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           1           134
  CLUS_2           1            91
  CLUS_3           1           171
  CLUS_4          14           162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ERF MUTATED        9      1      5
  ERF WILD-TYPE    206    154    157
D111V2, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           9           206
  CLUS_2           1           154
  CLUS_3           5           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERF MUTATED        5      8      3      1
  ERF WILD-TYPE    130    116    122     59
D111V3, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           5           130
  CLUS_2           8           116
  CLUS_3           3           122
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ERF MUTATED        9      6      2
  ERF WILD-TYPE    244     96     87
D111V4, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           9           244
  CLUS_2           6            96
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ERF MUTATED        1     11      5
  ERF WILD-TYPE    163    236    138
D111V5, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           1           163
  CLUS_2          11           236
  CLUS_3           5           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERF MUTATED        3      3      7      0      4
  ERF WILD-TYPE    118    101     84    121    113
D111V6, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           3           118
  CLUS_2           3           101
  CLUS_3           7            84
  CLUS_4           0           121
  CLUS_5           4           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ERF MUTATED        0     12      6
  ERF WILD-TYPE    159    239    159
D111V7, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           0           159
  CLUS_2          12           239
  CLUS_3           6           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERF MUTATED        3      6      6      0      3
  ERF WILD-TYPE    115    125    145     94     78
D111V8, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           3           115
  CLUS_2           6           125
  CLUS_3           6           145
  CLUS_4           0            94
  CLUS_5           3            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERF MUTATED        0      3      2      1      5
  ERF WILD-TYPE    118    133    113     39     66
D111V9, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           0           118
  CLUS_2           3           133
  CLUS_3           2           113
  CLUS_4           1            39
  CLUS_5           5            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERF MUTATED        0      3      5      3      0
  ERF WILD-TYPE     48    106    125     98     92
D111V10, multiclass
        clus
vv       ERF MUTATED ERF WILD-TYPE
  CLUS_1           0            48
  CLUS_2           3           106
  CLUS_3           5           125
  CLUS_4           3            98
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(112) Variable = GYLTL1B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GYLTL1B MUTATED        0      0      1     17
  GYLTL1B WILD-TYPE    135     92    171    159
D112V1, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4              17               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GYLTL1B MUTATED       13      1      3
  GYLTL1B WILD-TYPE    202    154    159
D112V2, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1              13               202
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GYLTL1B MUTATED        4      5      1      2
  GYLTL1B WILD-TYPE    131    119    124     58
D112V3, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               4               131
  CLUS_2               5               119
  CLUS_3               1               124
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GYLTL1B MUTATED        9      3      0
  GYLTL1B WILD-TYPE    244     99     89
D112V4, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               9               244
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GYLTL1B MUTATED        2     12      4
  GYLTL1B WILD-TYPE    162    235    139
D112V5, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               2               162
  CLUS_2              12               235
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GYLTL1B MUTATED        0      5      9      1      3
  GYLTL1B WILD-TYPE    121     99     82    120    114
D112V6, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               0               121
  CLUS_2               5                99
  CLUS_3               9                82
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GYLTL1B MUTATED        1     14      4
  GYLTL1B WILD-TYPE    158    237    161
D112V7, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               1               158
  CLUS_2              14               237
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GYLTL1B MUTATED        2      8      7      1      1
  GYLTL1B WILD-TYPE    116    123    144     93     80
D112V8, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               2               116
  CLUS_2               8               123
  CLUS_3               7               144
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GYLTL1B MUTATED        0      5      3      0      6
  GYLTL1B WILD-TYPE    118    131    112     40     65
D112V9, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GYLTL1B MUTATED        0      5      6      2      1
  GYLTL1B WILD-TYPE     48    104    124     99     91
D112V10, multiclass
        clus
vv       GYLTL1B MUTATED GYLTL1B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               6               124
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(113) Variable = POLM MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POLM MUTATED        1      0      1     12
  POLM WILD-TYPE    134     92    171    164
D113V1, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POLM MUTATED        8      1      3
  POLM WILD-TYPE    207    154    159
D113V2, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            8            207
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POLM MUTATED        6      5      0      0
  POLM WILD-TYPE    129    119    125     60
D113V3, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            6            129
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POLM MUTATED        7      3      1
  POLM WILD-TYPE    246     99     88
D113V4, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            7            246
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POLM MUTATED        3      7      4
  POLM WILD-TYPE    161    240    139
D113V5, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLM MUTATED        1      3      6      1      3
  POLM WILD-TYPE    120    101     85    120    114
D113V6, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POLM MUTATED        0     10      4
  POLM WILD-TYPE    159    241    161
D113V7, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            0            159
  CLUS_2           10            241
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLM MUTATED        1      7      5      1      0
  POLM WILD-TYPE    117    124    146     93     81
D113V8, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            1            117
  CLUS_2            7            124
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLM MUTATED        0      3      2      0      5
  POLM WILD-TYPE    118    133    113     40     66
D113V9, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLM MUTATED        0      3      5      1      1
  POLM WILD-TYPE     48    106    125    100     91
D113V10, multiclass
        clus
vv       POLM MUTATED POLM WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            5            125
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(114) Variable = HLA-A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HLA-A MUTATED        3      0      1     16
  HLA-A WILD-TYPE    132     92    171    160
D114V1, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-A MUTATED       10      2      3
  HLA-A WILD-TYPE    205    153    159
D114V2, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1            10             205
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HLA-A MUTATED        5     10      0      2
  HLA-A WILD-TYPE    130    114    125     58
D114V3, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             5             130
  CLUS_2            10             114
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-A MUTATED       10      7      0
  HLA-A WILD-TYPE    243     95     89
D114V4, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1            10             243
  CLUS_2             7              95
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-A MUTATED        3     12      5
  HLA-A WILD-TYPE    161    235    138
D114V5, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             3             161
  CLUS_2            12             235
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-A MUTATED        2      2     13      1      2
  HLA-A WILD-TYPE    119    102     78    120    115
D114V6, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3            13              78
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HLA-A MUTATED        2     17      1
  HLA-A WILD-TYPE    157    234    164
D114V7, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             2             157
  CLUS_2            17             234
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-A MUTATED        2      8      9      1      0
  HLA-A WILD-TYPE    116    123    142     93     81
D114V8, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             123
  CLUS_3             9             142
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-A MUTATED        1      7      0      1      5
  HLA-A WILD-TYPE    117    129    115     39     66
D114V9, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HLA-A MUTATED        0      8      5      0      1
  HLA-A WILD-TYPE     48    101    125    101     91
D114V10, multiclass
        clus
vv       HLA-A MUTATED HLA-A WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(115) Variable = EIF4G3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4G3 MUTATED        3      1      5     14
  EIF4G3 WILD-TYPE    132     91    167    162
D115V1, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              5              167
  CLUS_4             14              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G3 MUTATED       17      3      2
  EIF4G3 WILD-TYPE    198    152    160
D115V2, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1             17              198
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4G3 MUTATED        8      5      3      2
  EIF4G3 WILD-TYPE    127    119    122     58
D115V3, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              5              119
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G3 MUTATED       11      3      4
  EIF4G3 WILD-TYPE    242     99     85
D115V4, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              3               99
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G3 MUTATED        4     15      5
  EIF4G3 WILD-TYPE    160    232    138
D115V5, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             15              232
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G3 MUTATED        5      3     11      1      4
  EIF4G3 WILD-TYPE    116    101     80    120    113
D115V6, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              5              116
  CLUS_2              3              101
  CLUS_3             11               80
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G3 MUTATED        4     15      5
  EIF4G3 WILD-TYPE    155    236    160
D115V7, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             15              236
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G3 MUTATED        6      7      8      1      2
  EIF4G3 WILD-TYPE    112    124    143     93     79
D115V8, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              6              112
  CLUS_2              7              124
  CLUS_3              8              143
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G3 MUTATED        3      7      5      2      5
  EIF4G3 WILD-TYPE    115    129    110     38     66
D115V9, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              129
  CLUS_3              5              110
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G3 MUTATED        3      6     10      2      1
  EIF4G3 WILD-TYPE     45    103    120     99     91
D115V10, multiclass
        clus
vv       EIF4G3 MUTATED EIF4G3 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              6              103
  CLUS_3             10              120
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(116) Variable = CTNNB1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTNNB1 MUTATED        7      4      3     19
  CTNNB1 WILD-TYPE    128     88    169    157
D116V1, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNB1 MUTATED       21      6      4
  CTNNB1 WILD-TYPE    194    149    158
D116V2, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1             21              194
  CLUS_2              6              149
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTNNB1 MUTATED        5     11      4      3
  CTNNB1 WILD-TYPE    130    113    121     57
D116V3, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2             11              113
  CLUS_3              4              121
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNB1 MUTATED       12      7      4
  CTNNB1 WILD-TYPE    241     95     85
D116V4, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              7               95
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNB1 MUTATED       13     13      5
  CTNNB1 WILD-TYPE    151    234    138
D116V5, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1             13              151
  CLUS_2             13              234
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNB1 MUTATED        6      3      8      4     10
  CTNNB1 WILD-TYPE    115    101     83    117    107
D116V6, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              3              101
  CLUS_3              8               83
  CLUS_4              4              117
  CLUS_5             10              107
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNB1 MUTATED       12     16      5
  CTNNB1 WILD-TYPE    147    235    160
D116V7, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1             12              147
  CLUS_2             16              235
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNB1 MUTATED        5     11     11      2      4
  CTNNB1 WILD-TYPE    113    120    140     92     77
D116V8, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1              5              113
  CLUS_2             11              120
  CLUS_3             11              140
  CLUS_4              2               92
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNB1 MUTATED        7      6      4      2      7
  CTNNB1 WILD-TYPE    111    130    111     38     64
D116V9, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              6              130
  CLUS_3              4              111
  CLUS_4              2               38
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNB1 MUTATED        4      8      9      3      2
  CTNNB1 WILD-TYPE     44    101    121     98     90
D116V10, multiclass
        clus
vv       CTNNB1 MUTATED CTNNB1 WILD-TYPE
  CLUS_1              4               44
  CLUS_2              8              101
  CLUS_3              9              121
  CLUS_4              3               98
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(117) Variable = TMEM41A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM41A MUTATED        1      0      0      8
  TMEM41A WILD-TYPE    134     92    172    168
D117V1, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41A MUTATED        7      0      1
  TMEM41A WILD-TYPE    208    155    161
D117V2, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               7               208
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM41A MUTATED        6      0      0      1
  TMEM41A WILD-TYPE    129    124    125     59
D117V3, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               6               129
  CLUS_2               0               124
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41A MUTATED        7      0      0
  TMEM41A WILD-TYPE    246    102     89
D117V4, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               7               246
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41A MUTATED        0      6      3
  TMEM41A WILD-TYPE    164    241    140
D117V5, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               0               164
  CLUS_2               6               241
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41A MUTATED        0      2      6      0      1
  TMEM41A WILD-TYPE    121    102     85    121    116
D117V6, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               6                85
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41A MUTATED        0      8      1
  TMEM41A WILD-TYPE    159    243    164
D117V7, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               0               159
  CLUS_2               8               243
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41A MUTATED        0      4      4      0      1
  TMEM41A WILD-TYPE    118    127    147     94     80
D117V8, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41A MUTATED        0      2      1      1      3
  TMEM41A WILD-TYPE    118    134    114     39     68
D117V9, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41A MUTATED        0      3      3      1      0
  TMEM41A WILD-TYPE     48    106    127    100     92
D117V10, multiclass
        clus
vv       TMEM41A MUTATED TMEM41A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(118) Variable = VPS13B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VPS13B MUTATED        8      8     10     36
  VPS13B WILD-TYPE    127     84    162    140
D118V1, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1              8              127
  CLUS_2              8               84
  CLUS_3             10              162
  CLUS_4             36              140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13B MUTATED       33     10     10
  VPS13B WILD-TYPE    182    145    152
D118V2, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             33              182
  CLUS_2             10              145
  CLUS_3             10              152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VPS13B MUTATED       15     21     10      3
  VPS13B WILD-TYPE    120    103    115     57
D118V3, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             15              120
  CLUS_2             21              103
  CLUS_3             10              115
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13B MUTATED       28     14      7
  VPS13B WILD-TYPE    225     88     82
D118V4, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             28              225
  CLUS_2             14               88
  CLUS_3              7               82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13B MUTATED       11     33     16
  VPS13B WILD-TYPE    153    214    127
D118V5, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             11              153
  CLUS_2             33              214
  CLUS_3             16              127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13B MUTATED       10     14     18      5     13
  VPS13B WILD-TYPE    111     90     73    116    104
D118V6, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             10              111
  CLUS_2             14               90
  CLUS_3             18               73
  CLUS_4              5              116
  CLUS_5             13              104
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13B MUTATED       11     39     12
  VPS13B WILD-TYPE    148    212    153
D118V7, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             11              148
  CLUS_2             39              212
  CLUS_3             12              153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13B MUTATED       10     20     20      6      6
  VPS13B WILD-TYPE    108    111    131     88     75
D118V8, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1             10              108
  CLUS_2             20              111
  CLUS_3             20              131
  CLUS_4              6               88
  CLUS_5              6               75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13B MUTATED        7     17      8      4     11
  VPS13B WILD-TYPE    111    119    107     36     60
D118V9, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1              7              111
  CLUS_2             17              119
  CLUS_3              8              107
  CLUS_4              4               36
  CLUS_5             11               60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13B MUTATED        3     14     15      9      6
  VPS13B WILD-TYPE     45     95    115     92     86
D118V10, multiclass
        clus
vv       VPS13B MUTATED VPS13B WILD-TYPE
  CLUS_1              3               45
  CLUS_2             14               95
  CLUS_3             15              115
  CLUS_4              9               92
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(119) Variable = PBRM1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PBRM1 MUTATED        4      1      6     21
  PBRM1 WILD-TYPE    131     91    166    155
D119V1, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             6             166
  CLUS_4            21             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PBRM1 MUTATED       18      5      8
  PBRM1 WILD-TYPE    197    150    154
D119V2, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1            18             197
  CLUS_2             5             150
  CLUS_3             8             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PBRM1 MUTATED       11     14      3      1
  PBRM1 WILD-TYPE    124    110    122     59
D119V3, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            14             110
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PBRM1 MUTATED       17     10      2
  PBRM1 WILD-TYPE    236     92     87
D119V4, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1            17             236
  CLUS_2            10              92
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PBRM1 MUTATED        7     18      6
  PBRM1 WILD-TYPE    157    229    137
D119V5, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            18             229
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBRM1 MUTATED        3      7     10      4      7
  PBRM1 WILD-TYPE    118     97     81    117    110
D119V6, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             7              97
  CLUS_3            10              81
  CLUS_4             4             117
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PBRM1 MUTATED        5     26      3
  PBRM1 WILD-TYPE    154    225    162
D119V7, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            26             225
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBRM1 MUTATED        2     12     15      3      2
  PBRM1 WILD-TYPE    116    119    136     91     79
D119V8, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            12             119
  CLUS_3            15             136
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBRM1 MUTATED        4     12      0      2     10
  PBRM1 WILD-TYPE    114    124    115     38     61
D119V9, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            12             124
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5            10              61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBRM1 MUTATED        1      9     13      2      3
  PBRM1 WILD-TYPE     47    100    117     99     89
D119V10, multiclass
        clus
vv       PBRM1 MUTATED PBRM1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             9             100
  CLUS_3            13             117
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(120) Variable = ALPK2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK2 MUTATED        1      1      3     24
  ALPK2 WILD-TYPE    134     91    169    152
D120V1, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK2 MUTATED       16      4      3
  ALPK2 WILD-TYPE    199    151    159
D120V2, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALPK2 MUTATED        6     10      3      5
  ALPK2 WILD-TYPE    129    114    122     55
D120V3, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            10             114
  CLUS_3             3             122
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK2 MUTATED       16      5      3
  ALPK2 WILD-TYPE    237     97     86
D120V4, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1            16             237
  CLUS_2             5              97
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK2 MUTATED        5     18      5
  ALPK2 WILD-TYPE    159    229    138
D120V5, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            18             229
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALPK2 MUTATED        1      6     14      3      4
  ALPK2 WILD-TYPE    120     98     77    118    113
D120V6, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             6              98
  CLUS_3            14              77
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALPK2 MUTATED        5     19      5
  ALPK2 WILD-TYPE    154    232    160
D120V7, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            19             232
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALPK2 MUTATED        1     14      8      3      3
  ALPK2 WILD-TYPE    117    117    143     91     78
D120V8, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            14             117
  CLUS_3             8             143
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALPK2 MUTATED        3     10      2      2      4
  ALPK2 WILD-TYPE    115    126    113     38     67
D120V9, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            10             126
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALPK2 MUTATED        1      9      7      1      3
  ALPK2 WILD-TYPE     47    100    123    100     89
D120V10, multiclass
        clus
vv       ALPK2 MUTATED ALPK2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             9             100
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(121) Variable = MED15 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED15 MUTATED        1      1      4     16
  MED15 WILD-TYPE    134     91    168    160
D121V1, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED15 MUTATED        9      4      8
  MED15 WILD-TYPE    206    151    154
D121V2, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             4             151
  CLUS_3             8             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED15 MUTATED        6      7      3      2
  MED15 WILD-TYPE    129    117    122     58
D121V3, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             7             117
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED15 MUTATED       10      6      2
  MED15 WILD-TYPE    243     96     87
D121V4, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED15 MUTATED        5      9      7
  MED15 WILD-TYPE    159    238    136
D121V5, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             9             238
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED15 MUTATED        0      5      6      4      6
  MED15 WILD-TYPE    121     99     85    117    111
D121V6, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             5              99
  CLUS_3             6              85
  CLUS_4             4             117
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED15 MUTATED        3     12      7
  MED15 WILD-TYPE    156    239    158
D121V7, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            12             239
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED15 MUTATED        0      4     10      3      5
  MED15 WILD-TYPE    118    127    141     91     76
D121V8, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3            10             141
  CLUS_4             3              91
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED15 MUTATED        2      4      5      2      5
  MED15 WILD-TYPE    116    132    110     38     66
D121V9, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             132
  CLUS_3             5             110
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED15 MUTATED        1      3      7      4      3
  MED15 WILD-TYPE     47    106    123     97     89
D121V10, multiclass
        clus
vv       MED15 MUTATED MED15 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             7             123
  CLUS_4             4              97
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(122) Variable = TBC1D10C MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBC1D10C MUTATED        1      1      0      8
  TBC1D10C WILD-TYPE    134     91    172    168
D122V1, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D10C MUTATED        7      1      1
  TBC1D10C WILD-TYPE    208    154    161
D122V2, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                7                208
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBC1D10C MUTATED        2      5      0      0
  TBC1D10C WILD-TYPE    133    119    125     60
D122V3, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                2                133
  CLUS_2                5                119
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D10C MUTATED        4      3      0
  TBC1D10C WILD-TYPE    249     99     89
D122V4, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                4                249
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D10C MUTATED        1      7      2
  TBC1D10C WILD-TYPE    163    240    141
D122V5, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                1                163
  CLUS_2                7                240
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D10C MUTATED        0      2      8      0      0
  TBC1D10C WILD-TYPE    121    102     83    121    117
D122V6, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                8                 83
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D10C MUTATED        1      8      1
  TBC1D10C WILD-TYPE    158    243    164
D122V7, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                1                158
  CLUS_2                8                243
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D10C MUTATED        1      5      4      0      0
  TBC1D10C WILD-TYPE    117    126    147     94     81
D122V8, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                126
  CLUS_3                4                147
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D10C MUTATED        0      4      1      1      2
  TBC1D10C WILD-TYPE    118    132    114     39     69
D122V9, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                132
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D10C MUTATED        0      5      3      0      0
  TBC1D10C WILD-TYPE     48    104    127    101     92
D122V10, multiclass
        clus
vv       TBC1D10C MUTATED TBC1D10C WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(123) Variable = CDH16 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDH16 MUTATED        0      0      4     13
  CDH16 WILD-TYPE    135     92    168    163
D123V1, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH16 MUTATED       10      1      4
  CDH16 WILD-TYPE    205    154    158
D123V2, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDH16 MUTATED        5      9      0      1
  CDH16 WILD-TYPE    130    115    125     59
D123V3, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             9             115
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH16 MUTATED        9      6      0
  CDH16 WILD-TYPE    244     96     89
D123V4, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             6              96
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH16 MUTATED        2     10      4
  CDH16 WILD-TYPE    162    237    139
D123V5, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            10             237
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH16 MUTATED        2      2      9      1      2
  CDH16 WILD-TYPE    119    102     82    120    115
D123V6, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH16 MUTATED        2     14      1
  CDH16 WILD-TYPE    157    237    164
D123V7, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            14             237
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH16 MUTATED        2      9      4      1      1
  CDH16 WILD-TYPE    116    122    147     93     80
D123V8, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             122
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH16 MUTATED        0      4      1      2      4
  CDH16 WILD-TYPE    118    132    114     38     67
D123V9, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH16 MUTATED        1      5      4      0      1
  CDH16 WILD-TYPE     47    104    126    101     91
D123V10, multiclass
        clus
vv       CDH16 MUTATED CDH16 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(124) Variable = ANAPC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANAPC1 MUTATED        0      1      2     18
  ANAPC1 WILD-TYPE    135     91    170    158
D124V1, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4             18              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANAPC1 MUTATED       12      1      5
  ANAPC1 WILD-TYPE    203    154    157
D124V2, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              1              154
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANAPC1 MUTATED        9      8      0      2
  ANAPC1 WILD-TYPE    126    116    125     58
D124V3, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              9              126
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANAPC1 MUTATED       14      4      1
  ANAPC1 WILD-TYPE    239     98     88
D124V4, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1             14              239
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANAPC1 MUTATED        6      9      4
  ANAPC1 WILD-TYPE    158    238    139
D124V5, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              9              238
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANAPC1 MUTATED        1      1     12      2      3
  ANAPC1 WILD-TYPE    120    103     79    119    114
D124V6, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3             12               79
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANAPC1 MUTATED        3     15      3
  ANAPC1 WILD-TYPE    156    236    162
D124V7, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             15              236
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANAPC1 MUTATED        1     10      6      2      2
  ANAPC1 WILD-TYPE    117    121    145     92     79
D124V8, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2             10              121
  CLUS_3              6              145
  CLUS_4              2               92
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANAPC1 MUTATED        1      3      0      3      8
  ANAPC1 WILD-TYPE    117    133    115     37     63
D124V9, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              3               37
  CLUS_5              8               63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANAPC1 MUTATED        1      5      6      1      2
  ANAPC1 WILD-TYPE     47    104    124    100     90
D124V10, multiclass
        clus
vv       ANAPC1 MUTATED ANAPC1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(125) Variable = SLC9A11 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A11 MUTATED        4      3      7     16
  SLC9A11 WILD-TYPE    131     89    165    160
D125V1, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3                89
  CLUS_3               7               165
  CLUS_4              16               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A11 MUTATED       16      5      3
  SLC9A11 WILD-TYPE    199    150    159
D125V2, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1              16               199
  CLUS_2               5               150
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A11 MUTATED        8     11      4      5
  SLC9A11 WILD-TYPE    127    113    121     55
D125V3, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               8               127
  CLUS_2              11               113
  CLUS_3               4               121
  CLUS_4               5                55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A11 MUTATED       17      8      3
  SLC9A11 WILD-TYPE    236     94     86
D125V4, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1              17               236
  CLUS_2               8                94
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A11 MUTATED        6     14      9
  SLC9A11 WILD-TYPE    158    233    134
D125V5, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              14               233
  CLUS_3               9               134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A11 MUTATED        2      5      9      5      8
  SLC9A11 WILD-TYPE    119     99     82    116    109
D125V6, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               5                99
  CLUS_3               9                82
  CLUS_4               5               116
  CLUS_5               8               109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A11 MUTATED        7     18      5
  SLC9A11 WILD-TYPE    152    233    160
D125V7, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               7               152
  CLUS_2              18               233
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A11 MUTATED        3     11     10      4      2
  SLC9A11 WILD-TYPE    115    120    141     90     79
D125V8, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              11               120
  CLUS_3              10               141
  CLUS_4               4                90
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A11 MUTATED        4      6      2      2      7
  SLC9A11 WILD-TYPE    114    130    113     38     64
D125V9, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               6               130
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               7                64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A11 MUTATED        1      7      7      2      4
  SLC9A11 WILD-TYPE     47    102    123     99     88
D125V10, multiclass
        clus
vv       SLC9A11 MUTATED SLC9A11 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               7               102
  CLUS_3               7               123
  CLUS_4               2                99
  CLUS_5               4                88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(126) Variable = C22ORF30 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C22ORF30 MUTATED        0      1      3      7
  C22ORF30 WILD-TYPE    135     91    169    169
D126V1, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C22ORF30 MUTATED        8      1      1
  C22ORF30 WILD-TYPE    207    154    161
D126V2, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                8                207
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C22ORF30 MUTATED        3      3      2      0
  C22ORF30 WILD-TYPE    132    121    123     60
D126V3, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                3                121
  CLUS_3                2                123
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C22ORF30 MUTATED        3      3      2
  C22ORF30 WILD-TYPE    250     99     87
D126V4, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                3                 99
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C22ORF30 MUTATED        4      5      2
  C22ORF30 WILD-TYPE    160    242    141
D126V5, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                4                160
  CLUS_2                5                242
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C22ORF30 MUTATED        1      2      3      3      2
  C22ORF30 WILD-TYPE    120    102     88    118    115
D126V6, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                3                 88
  CLUS_4                3                118
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C22ORF30 MUTATED        2      7      2
  C22ORF30 WILD-TYPE    157    244    163
D126V7, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                7                244
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C22ORF30 MUTATED        1      3      6      1      0
  C22ORF30 WILD-TYPE    117    128    145     93     81
D126V8, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                128
  CLUS_3                6                145
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C22ORF30 MUTATED        2      4      0      1      3
  C22ORF30 WILD-TYPE    116    132    115     39     68
D126V9, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                4                132
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C22ORF30 MUTATED        1      3      5      0      1
  C22ORF30 WILD-TYPE     47    106    125    101     91
D126V10, multiclass
        clus
vv       C22ORF30 MUTATED C22ORF30 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                3                106
  CLUS_3                5                125
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(127) Variable = ANKRD34A MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD34A MUTATED        2      1      0      8
  ANKRD34A WILD-TYPE    133     91    172    168
D127V1, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ANKRD34A MUTATED        6      1      2
  ANKRD34A WILD-TYPE    209    154    160
D127V2, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                6                209
  CLUS_2                1                154
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD34A MUTATED        4      2      1      1
  ANKRD34A WILD-TYPE    131    122    124     59
D127V3, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                4                131
  CLUS_2                2                122
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ANKRD34A MUTATED        5      2      1
  ANKRD34A WILD-TYPE    248    100     88
D127V4, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                5                248
  CLUS_2                2                100
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ANKRD34A MUTATED        1      7      3
  ANKRD34A WILD-TYPE    163    240    140
D127V5, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                1                163
  CLUS_2                7                240
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD34A MUTATED        3      1      4      0      3
  ANKRD34A WILD-TYPE    118    103     87    121    114
D127V6, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                3                118
  CLUS_2                1                103
  CLUS_3                4                 87
  CLUS_4                0                121
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ANKRD34A MUTATED        1      7      3
  ANKRD34A WILD-TYPE    158    244    162
D127V7, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                1                158
  CLUS_2                7                244
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD34A MUTATED        2      5      3      0      1
  ANKRD34A WILD-TYPE    116    126    148     94     80
D127V8, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                126
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD34A MUTATED        1      4      1      1      1
  ANKRD34A WILD-TYPE    117    132    114     39     70
D127V9, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                1                117
  CLUS_2                4                132
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD34A MUTATED        1      5      1      1      0
  ANKRD34A WILD-TYPE     47    104    129    100     92
D127V10, multiclass
        clus
vv       ANKRD34A MUTATED ANKRD34A WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                5                104
  CLUS_3                1                129
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(128) Variable = WNK4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WNK4 MUTATED        0      3      3     20
  WNK4 WILD-TYPE    135     89    169    156
D128V1, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3             89
  CLUS_3            3            169
  CLUS_4           20            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNK4 MUTATED       16      3      2
  WNK4 WILD-TYPE    199    152    160
D128V2, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1           16            199
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WNK4 MUTATED       11      8      0      3
  WNK4 WILD-TYPE    124    116    125     57
D128V3, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1           11            124
  CLUS_2            8            116
  CLUS_3            0            125
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNK4 MUTATED       16      5      1
  WNK4 WILD-TYPE    237     97     88
D128V4, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1           16            237
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNK4 MUTATED        5     12      8
  WNK4 WILD-TYPE    159    235    135
D128V5, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            5            159
  CLUS_2           12            235
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNK4 MUTATED        5      4      9      2      5
  WNK4 WILD-TYPE    116    100     82    119    112
D128V6, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            5            116
  CLUS_2            4            100
  CLUS_3            9             82
  CLUS_4            2            119
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WNK4 MUTATED        6     15      5
  WNK4 WILD-TYPE    153    236    160
D128V7, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            6            153
  CLUS_2           15            236
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNK4 MUTATED        4     10     10      1      1
  WNK4 WILD-TYPE    114    121    141     93     80
D128V8, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            4            114
  CLUS_2           10            121
  CLUS_3           10            141
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNK4 MUTATED        1     10      2      1      5
  WNK4 WILD-TYPE    117    126    113     39     66
D128V9, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            1            117
  CLUS_2           10            126
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNK4 MUTATED        2      6      8      2      1
  WNK4 WILD-TYPE     46    103    122     99     91
D128V10, multiclass
        clus
vv       WNK4 MUTATED WNK4 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3            8            122
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(129) Variable = PLA2G1B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLA2G1B MUTATED        1      2      1      2
  PLA2G1B WILD-TYPE    134     90    171    174
D129V1, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G1B MUTATED        3      1      2
  PLA2G1B WILD-TYPE    212    154    160
D129V2, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               3               212
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLA2G1B MUTATED        0      2      2      1
  PLA2G1B WILD-TYPE    135    122    123     59
D129V3, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G1B MUTATED        3      1      1
  PLA2G1B WILD-TYPE    250    101     88
D129V4, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G1B MUTATED        1      2      3
  PLA2G1B WILD-TYPE    163    245    140
D129V5, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G1B MUTATED        1      1      0      0      4
  PLA2G1B WILD-TYPE    120    103     91    121    113
D129V6, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               0                91
  CLUS_4               0               121
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G1B MUTATED        2      1      3
  PLA2G1B WILD-TYPE    157    250    162
D129V7, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               2               157
  CLUS_2               1               250
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G1B MUTATED        2      0      3      0      1
  PLA2G1B WILD-TYPE    116    131    148     94     80
D129V8, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               2               116
  CLUS_2               0               131
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G1B MUTATED        1      1      3      0      0
  PLA2G1B WILD-TYPE    117    135    112     40     71
D129V9, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G1B MUTATED        0      0      2      3      0
  PLA2G1B WILD-TYPE     48    109    128     98     92
D129V10, multiclass
        clus
vv       PLA2G1B MUTATED PLA2G1B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               2               128
  CLUS_4               3                98
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(130) Variable = ORC3L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ORC3L MUTATED        0      4      1      9
  ORC3L WILD-TYPE    135     88    171    167
D130V1, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             0             135
  CLUS_2             4              88
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ORC3L MUTATED        8      0      1
  ORC3L WILD-TYPE    207    155    161
D130V2, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ORC3L MUTATED        5      4      3      0
  ORC3L WILD-TYPE    130    120    122     60
D130V3, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ORC3L MUTATED        8      1      3
  ORC3L WILD-TYPE    245    101     86
D130V4, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ORC3L MUTATED        1      8      3
  ORC3L WILD-TYPE    163    239    140
D130V5, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             1             163
  CLUS_2             8             239
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ORC3L MUTATED        1      5      4      1      1
  ORC3L WILD-TYPE    120     99     87    120    116
D130V6, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ORC3L MUTATED        0     10      4
  ORC3L WILD-TYPE    159    241    161
D130V7, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             0             159
  CLUS_2            10             241
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ORC3L MUTATED        0      4      9      0      1
  ORC3L WILD-TYPE    118    127    142     94     80
D130V8, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             9             142
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ORC3L MUTATED        0      4      2      0      2
  ORC3L WILD-TYPE    118    132    113     40     69
D130V9, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ORC3L MUTATED        0      3      5      0      0
  ORC3L WILD-TYPE     48    106    125    101     92
D130V10, multiclass
        clus
vv       ORC3L MUTATED ORC3L WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(131) Variable = SLC9A10 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A10 MUTATED        3      2      1     14
  SLC9A10 WILD-TYPE    132     90    171    162
D131V1, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A10 MUTATED       15      1      4
  SLC9A10 WILD-TYPE    200    154    158
D131V2, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1              15               200
  CLUS_2               1               154
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A10 MUTATED        5      7      3      1
  SLC9A10 WILD-TYPE    130    117    122     59
D131V3, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               7               117
  CLUS_3               3               122
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A10 MUTATED       10      3      3
  SLC9A10 WILD-TYPE    243     99     86
D131V4, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1              10               243
  CLUS_2               3                99
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A10 MUTATED        6      8      5
  SLC9A10 WILD-TYPE    158    239    138
D131V5, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               6               158
  CLUS_2               8               239
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A10 MUTATED        1      3      8      3      4
  SLC9A10 WILD-TYPE    120    101     83    118    113
D131V6, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               8                83
  CLUS_4               3               118
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC9A10 MUTATED        2      9      8
  SLC9A10 WILD-TYPE    157    242    157
D131V7, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               9               242
  CLUS_3               8               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A10 MUTATED        1      7      7      2      2
  SLC9A10 WILD-TYPE    117    124    144     92     79
D131V8, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               7               124
  CLUS_3               7               144
  CLUS_4               2                92
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A10 MUTATED        1      5      5      1      7
  SLC9A10 WILD-TYPE    117    131    110     39     64
D131V9, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               131
  CLUS_3               5               110
  CLUS_4               1                39
  CLUS_5               7                64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A10 MUTATED        1      6      8      2      2
  SLC9A10 WILD-TYPE     47    103    122     99     90
D131V10, multiclass
        clus
vv       SLC9A10 MUTATED SLC9A10 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               6               103
  CLUS_3               8               122
  CLUS_4               2                99
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(132) Variable = ADAMDEC1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADAMDEC1 MUTATED        2      1      0     12
  ADAMDEC1 WILD-TYPE    133     91    172    164
D132V1, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4               12                164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ADAMDEC1 MUTATED        8      1      3
  ADAMDEC1 WILD-TYPE    207    154    159
D132V2, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                8                207
  CLUS_2                1                154
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADAMDEC1 MUTATED        7      5      0      2
  ADAMDEC1 WILD-TYPE    128    119    125     58
D132V3, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                5                119
  CLUS_3                0                125
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ADAMDEC1 MUTATED       12      2      0
  ADAMDEC1 WILD-TYPE    241    100     89
D132V4, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ADAMDEC1 MUTATED        3      8      3
  ADAMDEC1 WILD-TYPE    161    239    140
D132V5, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                8                239
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAMDEC1 MUTATED        3      1      8      0      2
  ADAMDEC1 WILD-TYPE    118    103     83    121    115
D132V6, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                1                103
  CLUS_3                8                 83
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ADAMDEC1 MUTATED        3      9      3
  ADAMDEC1 WILD-TYPE    156    242    162
D132V7, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                9                242
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAMDEC1 MUTATED        2      8      3      0      2
  ADAMDEC1 WILD-TYPE    116    123    148     94     79
D132V8, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                8                123
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAMDEC1 MUTATED        1      7      1      1      2
  ADAMDEC1 WILD-TYPE    117    129    114     39     69
D132V9, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                129
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADAMDEC1 MUTATED        2      6      2      2      0
  ADAMDEC1 WILD-TYPE     46    103    128     99     92
D132V10, multiclass
        clus
vv       ADAMDEC1 MUTATED ADAMDEC1 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                6                103
  CLUS_3                2                128
  CLUS_4                2                 99
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(133) Variable = ASAP2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASAP2 MUTATED        3      2      5     11
  ASAP2 WILD-TYPE    132     90    167    165
D133V1, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             5             167
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASAP2 MUTATED       10      6      2
  ASAP2 WILD-TYPE    205    149    160
D133V2, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             6             149
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASAP2 MUTATED        8      8      4      0
  ASAP2 WILD-TYPE    127    116    121     60
D133V3, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             8             116
  CLUS_3             4             121
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASAP2 MUTATED       13      4      3
  ASAP2 WILD-TYPE    240     98     86
D133V4, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             4              98
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASAP2 MUTATED        3      8      7
  ASAP2 WILD-TYPE    161    239    136
D133V5, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASAP2 MUTATED        5      3      3      3      4
  ASAP2 WILD-TYPE    116    101     88    118    113
D133V6, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASAP2 MUTATED        3     11      7
  ASAP2 WILD-TYPE    156    240    158
D133V7, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            11             240
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASAP2 MUTATED        0      5      9      3      4
  ASAP2 WILD-TYPE    118    126    142     91     77
D133V8, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             9             142
  CLUS_4             3              91
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASAP2 MUTATED        2      3      5      1      5
  ASAP2 WILD-TYPE    116    133    110     39     66
D133V9, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             5             110
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASAP2 MUTATED        1      2      7      3      3
  ASAP2 WILD-TYPE     47    107    123     98     89
D133V10, multiclass
        clus
vv       ASAP2 MUTATED ASAP2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             7             123
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(134) Variable = BCORL1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCORL1 MUTATED        3      1      2     21
  BCORL1 WILD-TYPE    132     91    170    155
D134V1, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4             21              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCORL1 MUTATED       15      2      6
  BCORL1 WILD-TYPE    200    153    156
D134V2, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              2              153
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCORL1 MUTATED        9     12      0      1
  BCORL1 WILD-TYPE    126    112    125     59
D134V3, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              9              126
  CLUS_2             12              112
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCORL1 MUTATED       15      6      1
  BCORL1 WILD-TYPE    238     96     88
D134V4, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1             15              238
  CLUS_2              6               96
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCORL1 MUTATED        1     21      5
  BCORL1 WILD-TYPE    163    226    138
D134V5, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2             21              226
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCORL1 MUTATED        4      5     14      0      4
  BCORL1 WILD-TYPE    117     99     77    121    113
D134V6, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              5               99
  CLUS_3             14               77
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCORL1 MUTATED        3     22      2
  BCORL1 WILD-TYPE    156    229    163
D134V7, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             22              229
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCORL1 MUTATED        4     10     13      0      0
  BCORL1 WILD-TYPE    114    121    138     94     81
D134V8, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2             10              121
  CLUS_3             13              138
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCORL1 MUTATED        1      8      1      0      9
  BCORL1 WILD-TYPE    117    128    114     40     62
D134V9, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              128
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              9               62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCORL1 MUTATED        1      9      8      1      0
  BCORL1 WILD-TYPE     47    100    122    100     92
D134V10, multiclass
        clus
vv       BCORL1 MUTATED BCORL1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              9              100
  CLUS_3              8              122
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(135) Variable = KCNJ10 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ10 MUTATED        1      0      0     14
  KCNJ10 WILD-TYPE    134     92    172    162
D135V1, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             14              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ10 MUTATED       12      0      0
  KCNJ10 WILD-TYPE    203    155    162
D135V2, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ10 MUTATED        6      7      1      0
  KCNJ10 WILD-TYPE    129    117    124     60
D135V3, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ10 MUTATED       11      2      1
  KCNJ10 WILD-TYPE    242    100     88
D135V4, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ10 MUTATED        1      9      3
  KCNJ10 WILD-TYPE    163    238    140
D135V5, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              9              238
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ10 MUTATED        0      1     10      0      2
  KCNJ10 WILD-TYPE    121    103     81    121    115
D135V6, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3             10               81
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNJ10 MUTATED        1     13      1
  KCNJ10 WILD-TYPE    158    238    164
D135V7, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             13              238
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ10 MUTATED        0      7      7      0      1
  KCNJ10 WILD-TYPE    118    124    144     94     80
D135V8, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              124
  CLUS_3              7              144
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ10 MUTATED        0      6      1      1      4
  KCNJ10 WILD-TYPE    118    130    114     39     67
D135V9, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ10 MUTATED        0      7      5      0      0
  KCNJ10 WILD-TYPE     48    102    125    101     92
D135V10, multiclass
        clus
vv       KCNJ10 MUTATED KCNJ10 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              7              102
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(136) Variable = WNT16 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WNT16 MUTATED        0      1      0     13
  WNT16 WILD-TYPE    135     91    172    163
D136V1, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WNT16 MUTATED        9      0      3
  WNT16 WILD-TYPE    206    155    159
D136V2, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WNT16 MUTATED        2      5      2      1
  WNT16 WILD-TYPE    133    119    123     59
D136V3, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WNT16 MUTATED        6      2      2
  WNT16 WILD-TYPE    247    100     87
D136V4, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WNT16 MUTATED        1      9      4
  WNT16 WILD-TYPE    163    238    139
D136V5, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT16 MUTATED        1      2      8      0      3
  WNT16 WILD-TYPE    120    102     83    121    114
D136V6, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             8              83
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WNT16 MUTATED        0      9      5
  WNT16 WILD-TYPE    159    242    160
D136V7, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             9             242
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT16 MUTATED        1      6      5      0      2
  WNT16 WILD-TYPE    117    125    146     94     79
D136V8, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT16 MUTATED        0      5      4      0      1
  WNT16 WILD-TYPE    118    131    111     40     70
D136V9, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             4             111
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WNT16 MUTATED        0      5      4      1      0
  WNT16 WILD-TYPE     48    104    126    100     92
D136V10, multiclass
        clus
vv       WNT16 MUTATED WNT16 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(137) Variable = JARID2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  JARID2 MUTATED        6      4      5     29
  JARID2 WILD-TYPE    129     88    167    147
D137V1, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4               88
  CLUS_3              5              167
  CLUS_4             29              147
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JARID2 MUTATED       30      1      6
  JARID2 WILD-TYPE    185    154    156
D137V2, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1             30              185
  CLUS_2              1              154
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  JARID2 MUTATED       12     11      3      4
  JARID2 WILD-TYPE    123    113    122     56
D137V3, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1             12              123
  CLUS_2             11              113
  CLUS_3              3              122
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JARID2 MUTATED       16     12      2
  JARID2 WILD-TYPE    237     90     87
D137V4, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1             16              237
  CLUS_2             12               90
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JARID2 MUTATED        7     28      8
  JARID2 WILD-TYPE    157    219    135
D137V5, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              7              157
  CLUS_2             28              219
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JARID2 MUTATED        3     10     21      3      6
  JARID2 WILD-TYPE    118     94     70    118    111
D137V6, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              3              118
  CLUS_2             10               94
  CLUS_3             21               70
  CLUS_4              3              118
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JARID2 MUTATED        4     32      8
  JARID2 WILD-TYPE    155    219    157
D137V7, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             32              219
  CLUS_3              8              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JARID2 MUTATED        3     23     14      1      3
  JARID2 WILD-TYPE    115    108    137     93     78
D137V8, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             23              108
  CLUS_3             14              137
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JARID2 MUTATED        2     14      5      5      8
  JARID2 WILD-TYPE    116    122    110     35     63
D137V9, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             14              122
  CLUS_3              5              110
  CLUS_4              5               35
  CLUS_5              8               63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JARID2 MUTATED        1     15     14      3      1
  JARID2 WILD-TYPE     47     94    116     98     91
D137V10, multiclass
        clus
vv       JARID2 MUTATED JARID2 WILD-TYPE
  CLUS_1              1               47
  CLUS_2             15               94
  CLUS_3             14              116
  CLUS_4              3               98
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(138) Variable = SLC27A3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC27A3 MUTATED        1      0      2      8
  SLC27A3 WILD-TYPE    134     92    170    168
D138V1, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC27A3 MUTATED        6      1      2
  SLC27A3 WILD-TYPE    209    154    160
D138V2, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC27A3 MUTATED        6      4      1      0
  SLC27A3 WILD-TYPE    129    120    124     60
D138V3, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC27A3 MUTATED        8      2      1
  SLC27A3 WILD-TYPE    245    100     88
D138V4, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC27A3 MUTATED        2      8      1
  SLC27A3 WILD-TYPE    162    239    142
D138V5, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               8               239
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC27A3 MUTATED        1      2      6      1      1
  SLC27A3 WILD-TYPE    120    102     85    120    116
D138V6, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC27A3 MUTATED        1      9      1
  SLC27A3 WILD-TYPE    158    242    164
D138V7, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               9               242
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC27A3 MUTATED        1      6      2      1      1
  SLC27A3 WILD-TYPE    117    125    149     93     80
D138V8, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC27A3 MUTATED        1      3      0      2      2
  SLC27A3 WILD-TYPE    117    133    115     38     69
D138V9, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               2                38
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC27A3 MUTATED        0      4      2      1      1
  SLC27A3 WILD-TYPE     48    105    128    100     91
D138V10, multiclass
        clus
vv       SLC27A3 MUTATED SLC27A3 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(139) Variable = MICALCL MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MICALCL MUTATED        5      1      4      9
  MICALCL WILD-TYPE    130     91    168    167
D139V1, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               5               130
  CLUS_2               1                91
  CLUS_3               4               168
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALCL MUTATED       11      1      4
  MICALCL WILD-TYPE    204    154    158
D139V2, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1              11               204
  CLUS_2               1               154
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MICALCL MUTATED        4      6      5      1
  MICALCL WILD-TYPE    131    118    120     59
D139V3, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               4               131
  CLUS_2               6               118
  CLUS_3               5               120
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALCL MUTATED        7      6      3
  MICALCL WILD-TYPE    246     96     86
D139V4, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               7               246
  CLUS_2               6                96
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALCL MUTATED        2     10      6
  MICALCL WILD-TYPE    162    237    137
D139V5, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               2               162
  CLUS_2              10               237
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALCL MUTATED        5      3      5      1      4
  MICALCL WILD-TYPE    116    101     86    120    113
D139V6, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               5               116
  CLUS_2               3               101
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALCL MUTATED        2     12      5
  MICALCL WILD-TYPE    157    239    160
D139V7, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               2               157
  CLUS_2              12               239
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALCL MUTATED        2      8      6      0      3
  MICALCL WILD-TYPE    116    123    145     94     78
D139V8, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               2               116
  CLUS_2               8               123
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALCL MUTATED        1      3      5      2      3
  MICALCL WILD-TYPE    117    133    110     38     68
D139V9, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               5               110
  CLUS_4               2                38
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALCL MUTATED        3      4      3      4      0
  MICALCL WILD-TYPE     45    105    127     97     92
D139V10, multiclass
        clus
vv       MICALCL MUTATED MICALCL WILD-TYPE
  CLUS_1               3                45
  CLUS_2               4               105
  CLUS_3               3               127
  CLUS_4               4                97
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(140) Variable = KLHDC8B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLHDC8B MUTATED        1      0      3      7
  KLHDC8B WILD-TYPE    134     92    169    169
D140V1, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KLHDC8B MUTATED        3      2      5
  KLHDC8B WILD-TYPE    212    153    157
D140V2, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               3               212
  CLUS_2               2               153
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLHDC8B MUTATED        6      5      0      0
  KLHDC8B WILD-TYPE    129    119    125     60
D140V3, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               6               129
  CLUS_2               5               119
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KLHDC8B MUTATED        8      2      1
  KLHDC8B WILD-TYPE    245    100     88
D140V4, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               8               245
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KLHDC8B MUTATED        1      6      3
  KLHDC8B WILD-TYPE    163    241    140
D140V5, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               1               163
  CLUS_2               6               241
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC8B MUTATED        2      2      3      1      2
  KLHDC8B WILD-TYPE    119    102     88    120    115
D140V6, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KLHDC8B MUTATED        1      8      2
  KLHDC8B WILD-TYPE    158    243    163
D140V7, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               1               158
  CLUS_2               8               243
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC8B MUTATED        1      3      4      1      2
  KLHDC8B WILD-TYPE    117    128    147     93     79
D140V8, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               128
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC8B MUTATED        1      2      1      0      2
  KLHDC8B WILD-TYPE    117    134    114     40     69
D140V9, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHDC8B MUTATED        0      0      3      2      1
  KLHDC8B WILD-TYPE     48    109    127     99     91
D140V10, multiclass
        clus
vv       KLHDC8B MUTATED KLHDC8B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               3               127
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(141) Variable = B3GNT5 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B3GNT5 MUTATED        1      0      2      9
  B3GNT5 WILD-TYPE    134     92    170    167
D141V1, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  B3GNT5 MUTATED        6      2      2
  B3GNT5 WILD-TYPE    209    153    160
D141V2, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B3GNT5 MUTATED        5      3      1      2
  B3GNT5 WILD-TYPE    130    121    124     58
D141V3, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  B3GNT5 MUTATED        7      3      1
  B3GNT5 WILD-TYPE    246     99     88
D141V4, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  B3GNT5 MUTATED        3      6      3
  B3GNT5 WILD-TYPE    161    241    140
D141V5, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B3GNT5 MUTATED        0      1      7      1      3
  B3GNT5 WILD-TYPE    121    103     84    120    114
D141V6, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              7               84
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  B3GNT5 MUTATED        1      8      3
  B3GNT5 WILD-TYPE    158    243    162
D141V7, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B3GNT5 MUTATED        0      6      5      1      0
  B3GNT5 WILD-TYPE    118    125    146     93     81
D141V8, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              125
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B3GNT5 MUTATED        1      4      0      1      3
  B3GNT5 WILD-TYPE    117    132    115     39     68
D141V9, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B3GNT5 MUTATED        1      4      3      0      1
  B3GNT5 WILD-TYPE     47    105    127    101     91
D141V10, multiclass
        clus
vv       B3GNT5 MUTATED B3GNT5 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(142) Variable = SPTY2D1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTY2D1 MUTATED        3      2      2     14
  SPTY2D1 WILD-TYPE    132     90    170    162
D142V1, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPTY2D1 MUTATED       13      2      3
  SPTY2D1 WILD-TYPE    202    153    159
D142V2, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1              13               202
  CLUS_2               2               153
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTY2D1 MUTATED        9      6      0      4
  SPTY2D1 WILD-TYPE    126    118    125     56
D142V3, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               6               118
  CLUS_3               0               125
  CLUS_4               4                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPTY2D1 MUTATED       17      1      1
  SPTY2D1 WILD-TYPE    236    101     88
D142V4, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1              17               236
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPTY2D1 MUTATED        3     13      3
  SPTY2D1 WILD-TYPE    161    234    140
D142V5, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               3               161
  CLUS_2              13               234
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTY2D1 MUTATED        3      4      9      1      2
  SPTY2D1 WILD-TYPE    118    100     82    120    115
D142V6, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               4               100
  CLUS_3               9                82
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPTY2D1 MUTATED        4     12      5
  SPTY2D1 WILD-TYPE    155    239    160
D142V7, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               4               155
  CLUS_2              12               239
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTY2D1 MUTATED        4      8      7      1      1
  SPTY2D1 WILD-TYPE    114    123    144     93     80
D142V8, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               8               123
  CLUS_3               7               144
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTY2D1 MUTATED        1      6      3      1      6
  SPTY2D1 WILD-TYPE    117    130    112     39     65
D142V9, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               130
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTY2D1 MUTATED        0      6      6      4      1
  SPTY2D1 WILD-TYPE     48    103    124     97     91
D142V10, multiclass
        clus
vv       SPTY2D1 MUTATED SPTY2D1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               6               103
  CLUS_3               6               124
  CLUS_4               4                97
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(143) Variable = TP53BP2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53BP2 MUTATED        1      0      5     11
  TP53BP2 WILD-TYPE    134     92    167    165
D143V1, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               5               167
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP2 MUTATED       11      3      2
  TP53BP2 WILD-TYPE    204    152    160
D143V2, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53BP2 MUTATED        9      4      4      0
  TP53BP2 WILD-TYPE    126    120    121     60
D143V3, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               4               120
  CLUS_3               4               121
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP2 MUTATED       12      2      3
  TP53BP2 WILD-TYPE    241    100     86
D143V4, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               2               100
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP2 MUTATED        3     10      4
  TP53BP2 WILD-TYPE    161    237    139
D143V5, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               3               161
  CLUS_2              10               237
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP2 MUTATED        1      3      7      4      2
  TP53BP2 WILD-TYPE    120    101     84    117    115
D143V6, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               7                84
  CLUS_4               4               117
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP2 MUTATED        2     11      5
  TP53BP2 WILD-TYPE    157    240    160
D143V7, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              11               240
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP2 MUTATED        0      6      5      3      4
  TP53BP2 WILD-TYPE    118    125    146     91     77
D143V8, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               3                91
  CLUS_5               4                77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP2 MUTATED        2      4      2      2      3
  TP53BP2 WILD-TYPE    116    132    113     38     68
D143V9, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP2 MUTATED        1      3      4      2      3
  TP53BP2 WILD-TYPE     47    106    126     99     89
D143V10, multiclass
        clus
vv       TP53BP2 MUTATED TP53BP2 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               4               126
  CLUS_4               2                99
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(144) Variable = HDLBP MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDLBP MUTATED       10      4      3     22
  HDLBP WILD-TYPE    125     88    169    154
D144V1, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1            10             125
  CLUS_2             4              88
  CLUS_3             3             169
  CLUS_4            22             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDLBP MUTATED       21      6      7
  HDLBP WILD-TYPE    194    149    155
D144V2, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1            21             194
  CLUS_2             6             149
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HDLBP MUTATED       13     12      3      6
  HDLBP WILD-TYPE    122    112    122     54
D144V3, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1            13             122
  CLUS_2            12             112
  CLUS_3             3             122
  CLUS_4             6              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDLBP MUTATED       21      8      5
  HDLBP WILD-TYPE    232     94     84
D144V4, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1            21             232
  CLUS_2             8              94
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDLBP MUTATED        4     25     11
  HDLBP WILD-TYPE    160    222    132
D144V5, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1             4             160
  CLUS_2            25             222
  CLUS_3            11             132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDLBP MUTATED        6      7     17      4      6
  HDLBP WILD-TYPE    115     97     74    117    111
D144V6, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1             6             115
  CLUS_2             7              97
  CLUS_3            17              74
  CLUS_4             4             117
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HDLBP MUTATED        4     30      6
  HDLBP WILD-TYPE    155    221    159
D144V7, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1             4             155
  CLUS_2            30             221
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDLBP MUTATED        4     20      9      4      3
  HDLBP WILD-TYPE    114    111    142     90     78
D144V8, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1             4             114
  CLUS_2            20             111
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDLBP MUTATED        4     16      4      0      7
  HDLBP WILD-TYPE    114    120    111     40     64
D144V9, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1             4             114
  CLUS_2            16             120
  CLUS_3             4             111
  CLUS_4             0              40
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HDLBP MUTATED        2     13     10      3      3
  HDLBP WILD-TYPE     46     96    120     98     89
D144V10, multiclass
        clus
vv       HDLBP MUTATED HDLBP WILD-TYPE
  CLUS_1             2              46
  CLUS_2            13              96
  CLUS_3            10             120
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(145) Variable = SYNJ1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYNJ1 MUTATED        0      3      6      9
  SYNJ1 WILD-TYPE    135     89    166    167
D145V1, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3              89
  CLUS_3             6             166
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYNJ1 MUTATED        8      7      1
  SYNJ1 WILD-TYPE    207    148    161
D145V2, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             7             148
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYNJ1 MUTATED        4     10      1      1
  SYNJ1 WILD-TYPE    131    114    124     59
D145V3, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2            10             114
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYNJ1 MUTATED       10      5      1
  SYNJ1 WILD-TYPE    243     97     88
D145V4, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYNJ1 MUTATED        6      8      3
  SYNJ1 WILD-TYPE    158    239    140
D145V5, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             6             158
  CLUS_2             8             239
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNJ1 MUTATED        3      1      7      5      1
  SYNJ1 WILD-TYPE    118    103     84    116    116
D145V6, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             5             116
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYNJ1 MUTATED        7      9      2
  SYNJ1 WILD-TYPE    152    242    163
D145V7, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             7             152
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNJ1 MUTATED        3      8      2      5      0
  SYNJ1 WILD-TYPE    115    123    149     89     81
D145V8, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             123
  CLUS_3             2             149
  CLUS_4             5              89
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNJ1 MUTATED        6      3      2      1      3
  SYNJ1 WILD-TYPE    112    133    113     39     68
D145V9, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             6             112
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNJ1 MUTATED        2      7      1      0      5
  SYNJ1 WILD-TYPE     46    102    129    101     87
D145V10, multiclass
        clus
vv       SYNJ1 MUTATED SYNJ1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             5              87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(146) Variable = PIGT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGT MUTATED        2      1      2     10
  PIGT WILD-TYPE    133     91    170    166
D146V1, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGT MUTATED       10      2      3
  PIGT WILD-TYPE    205    153    159
D146V2, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1           10            205
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGT MUTATED        3      4      2      1
  PIGT WILD-TYPE    132    120    123     59
D146V3, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4            120
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGT MUTATED        6      3      1
  PIGT WILD-TYPE    247     99     88
D146V4, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            6            247
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGT MUTATED        3     10      1
  PIGT WILD-TYPE    161    237    142
D146V5, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            3            161
  CLUS_2           10            237
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGT MUTATED        0      3      7      2      2
  PIGT WILD-TYPE    121    101     84    119    115
D146V6, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGT MUTATED        2      9      4
  PIGT WILD-TYPE    157    242    161
D146V7, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGT MUTATED        1      8      3      2      1
  PIGT WILD-TYPE    117    123    148     92     80
D146V8, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            123
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGT MUTATED        2      5      1      2      4
  PIGT WILD-TYPE    116    131    114     38     67
D146V9, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGT MUTATED        0      7      3      2      2
  PIGT WILD-TYPE     48    102    127     99     90
D146V10, multiclass
        clus
vv       PIGT MUTATED PIGT WILD-TYPE
  CLUS_1            0             48
  CLUS_2            7            102
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(147) Variable = TRIP4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIP4 MUTATED        0      2      3      9
  TRIP4 WILD-TYPE    135     90    169    167
D147V1, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRIP4 MUTATED        6      2      3
  TRIP4 WILD-TYPE    209    153    159
D147V2, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIP4 MUTATED        5      5      1      1
  TRIP4 WILD-TYPE    130    119    124     59
D147V3, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRIP4 MUTATED        6      5      1
  TRIP4 WILD-TYPE    247     97     88
D147V4, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRIP4 MUTATED        4      7      3
  TRIP4 WILD-TYPE    160    240    140
D147V5, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP4 MUTATED        1      4      4      2      3
  TRIP4 WILD-TYPE    120    100     87    119    114
D147V6, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRIP4 MUTATED        3      9      2
  TRIP4 WILD-TYPE    156    242    163
D147V7, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP4 MUTATED        2      4      5      2      1
  TRIP4 WILD-TYPE    116    127    146     92     80
D147V8, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP4 MUTATED        2      2      0      2      4
  TRIP4 WILD-TYPE    116    134    115     38     67
D147V9, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP4 MUTATED        1      1      5      1      2
  TRIP4 WILD-TYPE     47    108    125    100     90
D147V10, multiclass
        clus
vv       TRIP4 MUTATED TRIP4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(148) Variable = SGOL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        0      1      4     12
  SGOL2 WILD-TYPE    135     91    168    164
D148V1, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        8      3      3
  SGOL2 WILD-TYPE    207    152    159
D148V2, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGOL2 MUTATED        9      6      0      0
  SGOL2 WILD-TYPE    126    118    125     60
D148V3, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             6             118
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED       11      3      1
  SGOL2 WILD-TYPE    242     99     88
D148V4, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        4     11      1
  SGOL2 WILD-TYPE    160    236    142
D148V5, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            11             236
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGOL2 MUTATED        1      5      6      2      2
  SGOL2 WILD-TYPE    120     99     85    119    115
D148V6, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SGOL2 MUTATED        2     12      3
  SGOL2 WILD-TYPE    157    239    162
D148V7, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGOL2 MUTATED        2      6      7      1      1
  SGOL2 WILD-TYPE    116    125    144     93     80
D148V8, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGOL2 MUTATED        0      4      2      3      4
  SGOL2 WILD-TYPE    118    132    113     37     67
D148V9, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGOL2 MUTATED        1      3      6      2      1
  SGOL2 WILD-TYPE     47    106    124     99     91
D148V10, multiclass
        clus
vv       SGOL2 MUTATED SGOL2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(149) Variable = ARID2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED        3      5      3     21
  ARID2 WILD-TYPE    132     87    169    155
D149V1, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5              87
  CLUS_3             3             169
  CLUS_4            21             155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED       16      5      7
  ARID2 WILD-TYPE    199    150    155
D149V2, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             5             150
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID2 MUTATED       13     10      2      2
  ARID2 WILD-TYPE    122    114    123     58
D149V3, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1            13             122
  CLUS_2            10             114
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED       17      6      4
  ARID2 WILD-TYPE    236     96     85
D149V4, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1            17             236
  CLUS_2             6              96
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        7     15      9
  ARID2 WILD-TYPE    157    232    134
D149V5, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            15             232
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID2 MUTATED        8      8      7      3      5
  ARID2 WILD-TYPE    113     96     84    118    112
D149V6, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             8             113
  CLUS_2             8              96
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARID2 MUTATED        6     20      7
  ARID2 WILD-TYPE    153    231    158
D149V7, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            20             231
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID2 MUTATED        3      8     17      3      2
  ARID2 WILD-TYPE    115    123    134     91     79
D149V8, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             123
  CLUS_3            17             134
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID2 MUTATED        4      9      3      3      8
  ARID2 WILD-TYPE    114    127    112     37     63
D149V9, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             127
  CLUS_3             3             112
  CLUS_4             3              37
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID2 MUTATED        1      6     15      2      3
  ARID2 WILD-TYPE     47    103    115     99     89
D149V10, multiclass
        clus
vv       ARID2 MUTATED ARID2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3            15             115
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(150) Variable = MTMR9 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR9 MUTATED        1      3      1     13
  MTMR9 WILD-TYPE    134     89    171    163
D150V1, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR9 MUTATED        8      4      0
  MTMR9 WILD-TYPE    207    151    162
D150V2, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             4             151
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR9 MUTATED       10      4      0      0
  MTMR9 WILD-TYPE    125    120    125     60
D150V3, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR9 MUTATED       13      0      1
  MTMR9 WILD-TYPE    240    102     88
D150V4, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR9 MUTATED        4     10      3
  MTMR9 WILD-TYPE    160    237    140
D150V5, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR9 MUTATED        2      4      7      2      2
  MTMR9 WILD-TYPE    119    100     84    119    115
D150V6, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR9 MUTATED        4     13      1
  MTMR9 WILD-TYPE    155    238    164
D150V7, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            13             238
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR9 MUTATED        1     10      4      2      1
  MTMR9 WILD-TYPE    117    121    147     92     80
D150V8, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            10             121
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR9 MUTATED        3      6      1      0      2
  MTMR9 WILD-TYPE    115    130    114     40     69
D150V9, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR9 MUTATED        0      6      3      1      2
  MTMR9 WILD-TYPE     48    103    127    100     90
D150V10, multiclass
        clus
vv       MTMR9 MUTATED MTMR9 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(151) Variable = CR1L MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CR1L MUTATED        2      2      3     10
  CR1L WILD-TYPE    133     90    169    166
D151V1, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CR1L MUTATED        7      2      6
  CR1L WILD-TYPE    208    153    156
D151V2, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            7            208
  CLUS_2            2            153
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CR1L MUTATED        4      6      2      3
  CR1L WILD-TYPE    131    118    123     57
D151V3, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            4            131
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CR1L MUTATED        7      5      3
  CR1L WILD-TYPE    246     97     86
D151V4, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            7            246
  CLUS_2            5             97
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CR1L MUTATED        2      8      7
  CR1L WILD-TYPE    162    239    136
D151V5, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1L MUTATED        1      4      4      1      7
  CR1L WILD-TYPE    120    100     87    120    110
D151V6, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            1            120
  CLUS_2            4            100
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CR1L MUTATED        3      9      5
  CR1L WILD-TYPE    156    242    160
D151V7, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1L MUTATED        3      5      6      1      2
  CR1L WILD-TYPE    115    126    145     93     79
D151V8, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            126
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1L MUTATED        3      0      2      1      6
  CR1L WILD-TYPE    115    136    113     39     65
D151V9, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            3            115
  CLUS_2            0            136
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1L MUTATED        0      2      6      3      1
  CR1L WILD-TYPE     48    107    124     98     91
D151V10, multiclass
        clus
vv       CR1L MUTATED CR1L WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            6            124
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(152) Variable = YIPF2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YIPF2 MUTATED        2      1      3      4
  YIPF2 WILD-TYPE    133     91    169    172
D152V1, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIPF2 MUTATED        5      1      2
  YIPF2 WILD-TYPE    210    154    160
D152V2, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YIPF2 MUTATED        3      2      2      1
  YIPF2 WILD-TYPE    132    122    123     59
D152V3, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIPF2 MUTATED        6      0      2
  YIPF2 WILD-TYPE    247    102     87
D152V4, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIPF2 MUTATED        2      5      2
  YIPF2 WILD-TYPE    162    242    141
D152V5, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIPF2 MUTATED        0      2      2      4      1
  YIPF2 WILD-TYPE    121    102     89    117    116
D152V6, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             4             117
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIPF2 MUTATED        1      6      3
  YIPF2 WILD-TYPE    158    245    162
D152V7, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIPF2 MUTATED        1      4      3      2      0
  YIPF2 WILD-TYPE    117    127    148     92     81
D152V8, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIPF2 MUTATED        1      2      1      2      0
  YIPF2 WILD-TYPE    117    134    114     38     71
D152V9, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIPF2 MUTATED        0      2      1      1      2
  YIPF2 WILD-TYPE     48    107    129    100     90
D152V10, multiclass
        clus
vv       YIPF2 MUTATED YIPF2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(153) Variable = ITGA6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGA6 MUTATED        4      1      4      7
  ITGA6 WILD-TYPE    131     91    168    169
D153V1, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGA6 MUTATED        7      5      1
  ITGA6 WILD-TYPE    208    150    161
D153V2, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             5             150
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGA6 MUTATED        7      7      1      0
  ITGA6 WILD-TYPE    128    117    124     60
D153V3, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGA6 MUTATED       11      3      1
  ITGA6 WILD-TYPE    242     99     88
D153V4, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGA6 MUTATED        7      8      1
  ITGA6 WILD-TYPE    157    239    142
D153V5, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             7             157
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGA6 MUTATED        1      1      8      4      2
  ITGA6 WILD-TYPE    120    103     83    117    115
D153V6, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             8              83
  CLUS_4             4             117
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGA6 MUTATED        5      8      3
  ITGA6 WILD-TYPE    154    243    162
D153V7, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             5             154
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGA6 MUTATED        0      7      5      4      0
  ITGA6 WILD-TYPE    118    124    146     90     81
D153V8, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             7             124
  CLUS_3             5             146
  CLUS_4             4              90
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGA6 MUTATED        3      5      2      1      1
  ITGA6 WILD-TYPE    115    131    113     39     70
D153V9, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGA6 MUTATED        0      5      3      0      4
  ITGA6 WILD-TYPE     48    104    127    101     88
D153V10, multiclass
        clus
vv       ITGA6 MUTATED ITGA6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(154) Variable = ATP6V1B1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP6V1B1 MUTATED        2      0      1     19
  ATP6V1B1 WILD-TYPE    133     92    171    157
D154V1, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4               19                157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1B1 MUTATED       15      0      2
  ATP6V1B1 WILD-TYPE    200    155    160
D154V2, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1               15                200
  CLUS_2                0                155
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP6V1B1 MUTATED        4      9      1      3
  ATP6V1B1 WILD-TYPE    131    115    124     57
D154V3, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                9                115
  CLUS_3                1                124
  CLUS_4                3                 57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1B1 MUTATED        9      6      2
  ATP6V1B1 WILD-TYPE    244     96     87
D154V4, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                9                244
  CLUS_2                6                 96
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1B1 MUTATED        1     11      8
  ATP6V1B1 WILD-TYPE    163    236    135
D154V5, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                1                163
  CLUS_2               11                236
  CLUS_3                8                135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1B1 MUTATED        0      5      9      0      6
  ATP6V1B1 WILD-TYPE    121     99     82    121    111
D154V6, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                5                 99
  CLUS_3                9                 82
  CLUS_4                0                121
  CLUS_5                6                111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1B1 MUTATED        1     17      4
  ATP6V1B1 WILD-TYPE    158    234    161
D154V7, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                1                158
  CLUS_2               17                234
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1B1 MUTATED        2      8     10      0      2
  ATP6V1B1 WILD-TYPE    116    123    141     94     79
D154V8, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                8                123
  CLUS_3               10                141
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1B1 MUTATED        0      7      2      2      5
  ATP6V1B1 WILD-TYPE    118    129    113     38     66
D154V9, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                7                129
  CLUS_3                2                113
  CLUS_4                2                 38
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1B1 MUTATED        1      6      8      1      0
  ATP6V1B1 WILD-TYPE     47    103    122    100     92
D154V10, multiclass
        clus
vv       ATP6V1B1 MUTATED ATP6V1B1 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                6                103
  CLUS_3                8                122
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(155) Variable = GXYLT1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GXYLT1 MUTATED        1      1      1     12
  GXYLT1 WILD-TYPE    134     91    171    164
D155V1, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GXYLT1 MUTATED       10      0      4
  GXYLT1 WILD-TYPE    205    155    158
D155V2, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              0              155
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GXYLT1 MUTATED        6      9      0      0
  GXYLT1 WILD-TYPE    129    115    125     60
D155V3, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              9              115
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GXYLT1 MUTATED        9      5      1
  GXYLT1 WILD-TYPE    244     97     88
D155V4, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GXYLT1 MUTATED        0     11      3
  GXYLT1 WILD-TYPE    164    236    140
D155V5, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2             11              236
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GXYLT1 MUTATED        0      3      8      0      3
  GXYLT1 WILD-TYPE    121    101     83    121    114
D155V6, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              8               83
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GXYLT1 MUTATED        0     13      2
  GXYLT1 WILD-TYPE    159    238    163
D155V7, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2             13              238
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GXYLT1 MUTATED        1      7      5      0      2
  GXYLT1 WILD-TYPE    117    124    146     94     79
D155V8, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              124
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GXYLT1 MUTATED        0      3      2      1      7
  GXYLT1 WILD-TYPE    118    133    113     39     64
D155V9, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GXYLT1 MUTATED        0      5      6      2      0
  GXYLT1 WILD-TYPE     48    104    124     99     92
D155V10, multiclass
        clus
vv       GXYLT1 MUTATED GXYLT1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              6              124
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(156) Variable = DOCK5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED        1      2      3     26
  DOCK5 WILD-TYPE    134     90    169    150
D156V1, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4            26             150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       19      5      3
  DOCK5 WILD-TYPE    196    150    159
D156V2, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             5             150
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK5 MUTATED       11     11      1      1
  DOCK5 WILD-TYPE    124    113    124     59
D156V3, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            11             113
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED       19      5      0
  DOCK5 WILD-TYPE    234     97     89
D156V4, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1            19             234
  CLUS_2             5              97
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        8     16      4
  DOCK5 WILD-TYPE    156    231    139
D156V5, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             8             156
  CLUS_2            16             231
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK5 MUTATED        3      6     14      4      1
  DOCK5 WILD-TYPE    118     98     77    117    116
D156V6, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             6              98
  CLUS_3            14              77
  CLUS_4             4             117
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK5 MUTATED        7     21      4
  DOCK5 WILD-TYPE    152    230    161
D156V7, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            21             230
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK5 MUTATED        3     13     12      4      0
  DOCK5 WILD-TYPE    115    118    139     90     81
D156V8, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            13             118
  CLUS_3            12             139
  CLUS_4             4              90
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK5 MUTATED        5      9      3      1      6
  DOCK5 WILD-TYPE    113    127    112     39     65
D156V9, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             9             127
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK5 MUTATED        2      9      8      1      4
  DOCK5 WILD-TYPE     46    100    122    100     88
D156V10, multiclass
        clus
vv       DOCK5 MUTATED DOCK5 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             9             100
  CLUS_3             8             122
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(157) Variable = ARHGAP5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGAP5 MUTATED        5      2      6     17
  ARHGAP5 WILD-TYPE    130     90    166    159
D157V1, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               2                90
  CLUS_3               6               166
  CLUS_4              17               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGAP5 MUTATED       17      4      5
  ARHGAP5 WILD-TYPE    198    151    157
D157V2, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1              17               198
  CLUS_2               4               151
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGAP5 MUTATED        8     10      8      0
  ARHGAP5 WILD-TYPE    127    114    117     60
D157V3, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               8               127
  CLUS_2              10               114
  CLUS_3               8               117
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGAP5 MUTATED       14      7      5
  ARHGAP5 WILD-TYPE    239     95     84
D157V4, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1              14               239
  CLUS_2               7                95
  CLUS_3               5                84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGAP5 MUTATED        6     16      8
  ARHGAP5 WILD-TYPE    158    231    135
D157V5, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              16               231
  CLUS_3               8               135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP5 MUTATED        5      6     10      3      6
  ARHGAP5 WILD-TYPE    116     98     81    118    111
D157V6, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               5               116
  CLUS_2               6                98
  CLUS_3              10                81
  CLUS_4               3               118
  CLUS_5               6               111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGAP5 MUTATED        3     19      8
  ARHGAP5 WILD-TYPE    156    232    157
D157V7, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              19               232
  CLUS_3               8               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP5 MUTATED        5     12      7      3      3
  ARHGAP5 WILD-TYPE    113    119    144     91     78
D157V8, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               5               113
  CLUS_2              12               119
  CLUS_3               7               144
  CLUS_4               3                91
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP5 MUTATED        3      9      6      3      2
  ARHGAP5 WILD-TYPE    115    127    109     37     69
D157V9, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               9               127
  CLUS_3               6               109
  CLUS_4               3                37
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP5 MUTATED        2      9      4      5      3
  ARHGAP5 WILD-TYPE     46    100    126     96     89
D157V10, multiclass
        clus
vv       ARHGAP5 MUTATED ARHGAP5 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               9               100
  CLUS_3               4               126
  CLUS_4               5                96
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(158) Variable = BTBD7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTBD7 MUTATED        2      0      1     19
  BTBD7 WILD-TYPE    133     92    171    157
D158V1, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTBD7 MUTATED       14      1      3
  BTBD7 WILD-TYPE    201    154    159
D158V2, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTBD7 MUTATED        8      8      0      2
  BTBD7 WILD-TYPE    127    116    125     58
D158V3, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTBD7 MUTATED       13      5      0
  BTBD7 WILD-TYPE    240     97     89
D158V4, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             5              97
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTBD7 MUTATED        2     14      5
  BTBD7 WILD-TYPE    162    233    138
D158V5, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            14             233
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD7 MUTATED        1      7     10      0      3
  BTBD7 WILD-TYPE    120     97     81    121    114
D158V6, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             7              97
  CLUS_3            10              81
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTBD7 MUTATED        1     18      3
  BTBD7 WILD-TYPE    158    233    162
D158V7, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            18             233
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD7 MUTATED        1      8     12      0      1
  BTBD7 WILD-TYPE    117    123    139     94     80
D158V8, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3            12             139
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD7 MUTATED        0      6      3      1      5
  BTBD7 WILD-TYPE    118    130    112     39     66
D158V9, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD7 MUTATED        0      5      7      3      0
  BTBD7 WILD-TYPE     48    104    123     98     92
D158V10, multiclass
        clus
vv       BTBD7 MUTATED BTBD7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(159) Variable = GANAB MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GANAB MUTATED        3      1      4     12
  GANAB WILD-TYPE    132     91    168    164
D159V1, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GANAB MUTATED       15      1      3
  GANAB WILD-TYPE    200    154    159
D159V2, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1            15             200
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GANAB MUTATED        8      5      2      1
  GANAB WILD-TYPE    127    119    123     59
D159V3, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             8             127
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GANAB MUTATED       10      5      1
  GANAB WILD-TYPE    243     97     88
D159V4, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1            10             243
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GANAB MUTATED        3     11      6
  GANAB WILD-TYPE    161    236    137
D159V5, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             3             161
  CLUS_2            11             236
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GANAB MUTATED        2      3      7      1      7
  GANAB WILD-TYPE    119    101     84    120    110
D159V6, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GANAB MUTATED        3     12      5
  GANAB WILD-TYPE    156    239    160
D159V7, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             3             156
  CLUS_2            12             239
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GANAB MUTATED        0      6      9      1      4
  GANAB WILD-TYPE    118    125    142     93     77
D159V8, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             9             142
  CLUS_4             1              93
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GANAB MUTATED        1      6      2      3      5
  GANAB WILD-TYPE    117    130    113     37     66
D159V9, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GANAB MUTATED        1      5      9      1      1
  GANAB WILD-TYPE     47    104    121    100     91
D159V10, multiclass
        clus
vv       GANAB MUTATED GANAB WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             9             121
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(160) Variable = MLL3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLL3 MUTATED       13     11     13     32
  MLL3 WILD-TYPE    122     81    159    144
D160V1, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           13            122
  CLUS_2           11             81
  CLUS_3           13            159
  CLUS_4           32            144
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL3 MUTATED       33     11     11
  MLL3 WILD-TYPE    182    144    151
D160V2, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           33            182
  CLUS_2           11            144
  CLUS_3           11            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLL3 MUTATED       19     18      9      8
  MLL3 WILD-TYPE    116    106    116     52
D160V3, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           19            116
  CLUS_2           18            106
  CLUS_3            9            116
  CLUS_4            8             52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL3 MUTATED       35     13      6
  MLL3 WILD-TYPE    218     89     83
D160V4, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           35            218
  CLUS_2           13             89
  CLUS_3            6             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL3 MUTATED       17     40     10
  MLL3 WILD-TYPE    147    207    133
D160V5, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           17            147
  CLUS_2           40            207
  CLUS_3           10            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL3 MUTATED       14     15     17     11     10
  MLL3 WILD-TYPE    107     89     74    110    107
D160V6, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           14            107
  CLUS_2           15             89
  CLUS_3           17             74
  CLUS_4           11            110
  CLUS_5           10            107
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLL3 MUTATED       20     37     12
  MLL3 WILD-TYPE    139    214    153
D160V7, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           20            139
  CLUS_2           37            214
  CLUS_3           12            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL3 MUTATED        9     29     17      9      5
  MLL3 WILD-TYPE    109    102    134     85     76
D160V8, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1            9            109
  CLUS_2           29            102
  CLUS_3           17            134
  CLUS_4            9             85
  CLUS_5            5             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL3 MUTATED       13     17      6      6      7
  MLL3 WILD-TYPE    105    119    109     34     64
D160V9, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1           13            105
  CLUS_2           17            119
  CLUS_3            6            109
  CLUS_4            6             34
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLL3 MUTATED        5     13     18      4      9
  MLL3 WILD-TYPE     43     96    112     97     83
D160V10, multiclass
        clus
vv       MLL3 MUTATED MLL3 WILD-TYPE
  CLUS_1            5             43
  CLUS_2           13             96
  CLUS_3           18            112
  CLUS_4            4             97
  CLUS_5            9             83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(161) Variable = CLDN6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLDN6 MUTATED        0      1      0      9
  CLDN6 WILD-TYPE    135     91    172    167
D161V1, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLDN6 MUTATED        8      0      0
  CLDN6 WILD-TYPE    207    155    162
D161V2, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLDN6 MUTATED        4      2      0      1
  CLDN6 WILD-TYPE    131    122    125     59
D161V3, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLDN6 MUTATED        6      0      1
  CLDN6 WILD-TYPE    247    102     88
D161V4, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLDN6 MUTATED        1      7      2
  CLDN6 WILD-TYPE    163    240    141
D161V5, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLDN6 MUTATED        1      1      7      0      1
  CLDN6 WILD-TYPE    120    103     84    121    116
D161V6, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLDN6 MUTATED        2      7      1
  CLDN6 WILD-TYPE    157    244    164
D161V7, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLDN6 MUTATED        3      6      1      0      0
  CLDN6 WILD-TYPE    115    125    150     94     81
D161V8, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             125
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLDN6 MUTATED        0      6      1      1      0
  CLDN6 WILD-TYPE    118    130    114     39     71
D161V9, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLDN6 MUTATED        1      4      2      1      0
  CLDN6 WILD-TYPE     47    105    128    100     92
D161V10, multiclass
        clus
vv       CLDN6 MUTATED CLDN6 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(162) Variable = SAMD9L MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SAMD9L MUTATED        8      4      5     17
  SAMD9L WILD-TYPE    127     88    167    159
D162V1, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1              8              127
  CLUS_2              4               88
  CLUS_3              5              167
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SAMD9L MUTATED       18      8      5
  SAMD9L WILD-TYPE    197    147    157
D162V2, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1             18              197
  CLUS_2              8              147
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SAMD9L MUTATED       10     13      3      5
  SAMD9L WILD-TYPE    125    111    122     55
D162V3, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1             10              125
  CLUS_2             13              111
  CLUS_3              3              122
  CLUS_4              5               55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SAMD9L MUTATED       20      7      4
  SAMD9L WILD-TYPE    233     95     85
D162V4, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1             20              233
  CLUS_2              7               95
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SAMD9L MUTATED       11     15      6
  SAMD9L WILD-TYPE    153    232    137
D162V5, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1             11              153
  CLUS_2             15              232
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAMD9L MUTATED        5      7      9      6      5
  SAMD9L WILD-TYPE    116     97     82    115    112
D162V6, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1              5              116
  CLUS_2              7               97
  CLUS_3              9               82
  CLUS_4              6              115
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SAMD9L MUTATED       11     18      5
  SAMD9L WILD-TYPE    148    233    160
D162V7, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1             11              148
  CLUS_2             18              233
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAMD9L MUTATED        4     11     11      6      2
  SAMD9L WILD-TYPE    114    120    140     88     79
D162V8, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1              4              114
  CLUS_2             11              120
  CLUS_3             11              140
  CLUS_4              6               88
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAMD9L MUTATED        8      8      2      4      7
  SAMD9L WILD-TYPE    110    128    113     36     64
D162V9, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1              8              110
  CLUS_2              8              128
  CLUS_3              2              113
  CLUS_4              4               36
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAMD9L MUTATED        2      9     10      2      6
  SAMD9L WILD-TYPE     46    100    120     99     86
D162V10, multiclass
        clus
vv       SAMD9L MUTATED SAMD9L WILD-TYPE
  CLUS_1              2               46
  CLUS_2              9              100
  CLUS_3             10              120
  CLUS_4              2               99
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(163) Variable = FAM133A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM133A MUTATED        2      2      1      7
  FAM133A WILD-TYPE    133     90    171    169
D163V1, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM133A MUTATED        9      1      0
  FAM133A WILD-TYPE    206    154    162
D163V2, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               9               206
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM133A MUTATED        3      3      2      1
  FAM133A WILD-TYPE    132    121    123     59
D163V3, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               3               132
  CLUS_2               3               121
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM133A MUTATED        6      2      1
  FAM133A WILD-TYPE    247    100     88
D163V4, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               6               247
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM133A MUTATED        2      7      3
  FAM133A WILD-TYPE    162    240    140
D163V5, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               2               162
  CLUS_2               7               240
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM133A MUTATED        1      0      7      2      2
  FAM133A WILD-TYPE    120    104     84    119    115
D163V6, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               7                84
  CLUS_4               2               119
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM133A MUTATED        3      8      1
  FAM133A WILD-TYPE    156    243    164
D163V7, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               3               156
  CLUS_2               8               243
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM133A MUTATED        1      6      4      1      0
  FAM133A WILD-TYPE    117    125    147     93     81
D163V8, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM133A MUTATED        1      4      0      1      2
  FAM133A WILD-TYPE    117    132    115     39     69
D163V9, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               132
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM133A MUTATED        0      3      3      1      1
  FAM133A WILD-TYPE     48    106    127    100     91
D163V10, multiclass
        clus
vv       FAM133A MUTATED FAM133A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(164) Variable = MTIF2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTIF2 MUTATED        4      1      4     16
  MTIF2 WILD-TYPE    131     91    168    160
D164V1, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTIF2 MUTATED       12      3      7
  MTIF2 WILD-TYPE    203    152    155
D164V2, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             3             152
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTIF2 MUTATED       11      9      0      1
  MTIF2 WILD-TYPE    124    115    125     59
D164V3, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             9             115
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTIF2 MUTATED       17      3      1
  MTIF2 WILD-TYPE    236     99     88
D164V4, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1            17             236
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTIF2 MUTATED        6     12      5
  MTIF2 WILD-TYPE    158    235    138
D164V5, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            12             235
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTIF2 MUTATED        3      4      8      3      5
  MTIF2 WILD-TYPE    118    100     83    118    112
D164V6, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTIF2 MUTATED        6     15      4
  MTIF2 WILD-TYPE    153    236    161
D164V7, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            15             236
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTIF2 MUTATED        4      6      9      4      2
  MTIF2 WILD-TYPE    114    125    142     90     79
D164V8, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             6             125
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTIF2 MUTATED        6      7      1      1      4
  MTIF2 WILD-TYPE    112    129    114     39     67
D164V9, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             6             112
  CLUS_2             7             129
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTIF2 MUTATED        2      6      5      2      4
  MTIF2 WILD-TYPE     46    103    125     99     88
D164V10, multiclass
        clus
vv       MTIF2 MUTATED MTIF2 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(165) Variable = CR1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CR1 MUTATED        4      2      4     22
  CR1 WILD-TYPE    131     90    168    154
D165V1, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           4           131
  CLUS_2           2            90
  CLUS_3           4           168
  CLUS_4          22           154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR1 MUTATED       17      1      8
  CR1 WILD-TYPE    198    154    154
D165V2, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1          17           198
  CLUS_2           1           154
  CLUS_3           8           154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CR1 MUTATED       10     14      2      2
  CR1 WILD-TYPE    125    110    123     58
D165V3, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1          10           125
  CLUS_2          14           110
  CLUS_3           2           123
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR1 MUTATED       16      9      3
  CR1 WILD-TYPE    237     93     86
D165V4, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1          16           237
  CLUS_2           9            93
  CLUS_3           3            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR1 MUTATED        1     21      9
  CR1 WILD-TYPE    163    226    134
D165V5, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           1           163
  CLUS_2          21           226
  CLUS_3           9           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1 MUTATED        2      8     15      0      6
  CR1 WILD-TYPE    119     96     76    121    111
D165V6, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           2           119
  CLUS_2           8            96
  CLUS_3          15            76
  CLUS_4           0           121
  CLUS_5           6           111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CR1 MUTATED        1     25      6
  CR1 WILD-TYPE    158    226    159
D165V7, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           1           158
  CLUS_2          25           226
  CLUS_3           6           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1 MUTATED        2     14     11      0      5
  CR1 WILD-TYPE    116    117    140     94     76
D165V8, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           2           116
  CLUS_2          14           117
  CLUS_3          11           140
  CLUS_4           0            94
  CLUS_5           5            76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1 MUTATED        0      8      3      2      8
  CR1 WILD-TYPE    118    128    112     38     63
D165V9, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           0           118
  CLUS_2           8           128
  CLUS_3           3           112
  CLUS_4           2            38
  CLUS_5           8            63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CR1 MUTATED        0      5     13      3      0
  CR1 WILD-TYPE     48    104    117     98     92
D165V10, multiclass
        clus
vv       CR1 MUTATED CR1 WILD-TYPE
  CLUS_1           0            48
  CLUS_2           5           104
  CLUS_3          13           117
  CLUS_4           3            98
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(166) Variable = SERPINI1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINI1 MUTATED        1      1      0      7
  SERPINI1 WILD-TYPE    134     91    172    169
D166V1, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINI1 MUTATED        6      0      0
  SERPINI1 WILD-TYPE    209    155    162
D166V2, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                6                209
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINI1 MUTATED        2      6      0      1
  SERPINI1 WILD-TYPE    133    118    125     59
D166V3, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                6                118
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINI1 MUTATED        6      3      0
  SERPINI1 WILD-TYPE    247     99     89
D166V4, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                6                247
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINI1 MUTATED        1      6      1
  SERPINI1 WILD-TYPE    163    241    142
D166V5, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                6                241
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINI1 MUTATED        1      3      2      0      2
  SERPINI1 WILD-TYPE    120    101     89    121    115
D166V6, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                3                101
  CLUS_3                2                 89
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINI1 MUTATED        2      7      0
  SERPINI1 WILD-TYPE    157    244    165
D166V7, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                7                244
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINI1 MUTATED        2      4      3      0      0
  SERPINI1 WILD-TYPE    116    127    148     94     81
D166V8, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                4                127
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINI1 MUTATED        0      2      0      0      3
  SERPINI1 WILD-TYPE    118    134    115     40     68
D166V9, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINI1 MUTATED        0      3      2      0      0
  SERPINI1 WILD-TYPE     48    106    128    101     92
D166V10, multiclass
        clus
vv       SERPINI1 MUTATED SERPINI1 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(167) Variable = KIAA0195 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0195 MUTATED        2      0      3     16
  KIAA0195 WILD-TYPE    133     92    169    160
D167V1, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                3                169
  CLUS_4               16                160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0195 MUTATED       18      1      1
  KIAA0195 WILD-TYPE    197    154    161
D167V2, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1               18                197
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0195 MUTATED       13      7      0      0
  KIAA0195 WILD-TYPE    122    117    125     60
D167V3, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1               13                122
  CLUS_2                7                117
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0195 MUTATED       17      3      0
  KIAA0195 WILD-TYPE    236     99     89
D167V4, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1               17                236
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0195 MUTATED        2     16      4
  KIAA0195 WILD-TYPE    162    231    139
D167V5, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                2                162
  CLUS_2               16                231
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0195 MUTATED        2      3     13      1      3
  KIAA0195 WILD-TYPE    119    101     78    120    114
D167V6, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                3                101
  CLUS_3               13                 78
  CLUS_4                1                120
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0195 MUTATED        2     18      2
  KIAA0195 WILD-TYPE    157    233    163
D167V7, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                2                157
  CLUS_2               18                233
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0195 MUTATED        0     14      6      1      1
  KIAA0195 WILD-TYPE    118    117    145     93     80
D167V8, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                0                118
  CLUS_2               14                117
  CLUS_3                6                145
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0195 MUTATED        1      9      1      1      4
  KIAA0195 WILD-TYPE    117    127    114     39     67
D167V9, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                9                127
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0195 MUTATED        0     10      4      1      1
  KIAA0195 WILD-TYPE     48     99    126    100     91
D167V10, multiclass
        clus
vv       KIAA0195 MUTATED KIAA0195 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2               10                 99
  CLUS_3                4                126
  CLUS_4                1                100
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(168) Variable = PPIG MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPIG MUTATED        0      1      5     14
  PPIG WILD-TYPE    135     91    167    162
D168V1, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            5            167
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PPIG MUTATED       12      2      3
  PPIG WILD-TYPE    203    153    159
D168V2, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1           12            203
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPIG MUTATED        7      5      2      1
  PPIG WILD-TYPE    128    119    123     59
D168V3, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            7            128
  CLUS_2            5            119
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PPIG MUTATED       10      3      2
  PPIG WILD-TYPE    243     99     87
D168V4, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1           10            243
  CLUS_2            3             99
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PPIG MUTATED        3     13      3
  PPIG WILD-TYPE    161    234    140
D168V5, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            3            161
  CLUS_2           13            234
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIG MUTATED        1      1     11      1      5
  PPIG WILD-TYPE    120    103     80    120    112
D168V6, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3           11             80
  CLUS_4            1            120
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PPIG MUTATED        2     13      5
  PPIG WILD-TYPE    157    238    160
D168V7, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            2            157
  CLUS_2           13            238
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIG MUTATED        2      9      6      1      2
  PPIG WILD-TYPE    116    122    145     93     79
D168V8, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            2            116
  CLUS_2            9            122
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIG MUTATED        2      7      2      0      5
  PPIG WILD-TYPE    116    129    113     40     66
D168V9, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            129
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIG MUTATED        1      8      4      2      1
  PPIG WILD-TYPE     47    101    126     99     91
D168V10, multiclass
        clus
vv       PPIG MUTATED PPIG WILD-TYPE
  CLUS_1            1             47
  CLUS_2            8            101
  CLUS_3            4            126
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(169) Variable = HTR7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTR7 MUTATED        2      3      1     11
  HTR7 WILD-TYPE    133     89    171    165
D169V1, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3             89
  CLUS_3            1            171
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HTR7 MUTATED       10      3      1
  HTR7 WILD-TYPE    205    152    161
D169V2, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            3            152
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTR7 MUTATED        4      7      2      0
  HTR7 WILD-TYPE    131    117    123     60
D169V3, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HTR7 MUTATED       10      2      1
  HTR7 WILD-TYPE    243    100     88
D169V4, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HTR7 MUTATED        3     11      2
  HTR7 WILD-TYPE    161    236    141
D169V5, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            3            161
  CLUS_2           11            236
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR7 MUTATED        1      5      7      1      2
  HTR7 WILD-TYPE    120     99     84    120    115
D169V6, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            5             99
  CLUS_3            7             84
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HTR7 MUTATED        3     13      1
  HTR7 WILD-TYPE    156    238    164
D169V7, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           13            238
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR7 MUTATED        2      8      6      0      1
  HTR7 WILD-TYPE    116    123    145     94     80
D169V8, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            8            123
  CLUS_3            6            145
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR7 MUTATED        1      6      1      0      4
  HTR7 WILD-TYPE    117    130    114     40     67
D169V9, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            130
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR7 MUTATED        0      6      5      1      0
  HTR7 WILD-TYPE     48    103    125    100     92
D169V10, multiclass
        clus
vv       HTR7 MUTATED HTR7 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            5            125
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(170) Variable = PIGB MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGB MUTATED        0      0      1     10
  PIGB WILD-TYPE    135     92    171    166
D170V1, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGB MUTATED        6      1      1
  PIGB WILD-TYPE    209    154    161
D170V2, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            6            209
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGB MUTATED        4      3      0      1
  PIGB WILD-TYPE    131    121    125     59
D170V3, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGB MUTATED        6      2      0
  PIGB WILD-TYPE    247    100     89
D170V4, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            6            247
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGB MUTATED        2      5      4
  PIGB WILD-TYPE    162    242    139
D170V5, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGB MUTATED        0      2      3      1      5
  PIGB WILD-TYPE    121    102     88    120    112
D170V6, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGB MUTATED        1      7      3
  PIGB WILD-TYPE    158    244    162
D170V7, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            1            158
  CLUS_2            7            244
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGB MUTATED        0      4      5      1      1
  PIGB WILD-TYPE    118    127    146     93     80
D170V8, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGB MUTATED        1      3      1      0      2
  PIGB WILD-TYPE    117    133    114     40     69
D170V9, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGB MUTATED        0      1      4      1      1
  PIGB WILD-TYPE     48    108    126    100     91
D170V10, multiclass
        clus
vv       PIGB MUTATED PIGB WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(171) Variable = EEF2K MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF2K MUTATED        2      0      3      8
  EEF2K WILD-TYPE    133     92    169    168
D171V1, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EEF2K MUTATED        4      4      2
  EEF2K WILD-TYPE    211    151    160
D171V2, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             4             211
  CLUS_2             4             151
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEF2K MUTATED        4      4      1      1
  EEF2K WILD-TYPE    131    120    124     59
D171V3, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EEF2K MUTATED        8      1      1
  EEF2K WILD-TYPE    245    101     88
D171V4, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EEF2K MUTATED        3      7      3
  EEF2K WILD-TYPE    161    240    140
D171V5, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEF2K MUTATED        2      3      4      2      2
  EEF2K WILD-TYPE    119    101     87    119    115
D171V6, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EEF2K MUTATED        3      8      3
  EEF2K WILD-TYPE    156    243    162
D171V7, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEF2K MUTATED        1      5      5      2      1
  EEF2K WILD-TYPE    117    126    146     92     80
D171V8, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEF2K MUTATED        2      6      0      0      1
  EEF2K WILD-TYPE    116    130    115     40     70
D171V9, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEF2K MUTATED        1      4      3      0      1
  EEF2K WILD-TYPE     47    105    127    101     91
D171V10, multiclass
        clus
vv       EEF2K MUTATED EEF2K WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(172) Variable = SNRNP35 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNRNP35 MUTATED        1      1      0      5
  SNRNP35 WILD-TYPE    134     91    172    171
D172V1, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SNRNP35 MUTATED        5      0      0
  SNRNP35 WILD-TYPE    210    155    162
D172V2, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNRNP35 MUTATED        2      2      0      1
  SNRNP35 WILD-TYPE    133    122    125     59
D172V3, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SNRNP35 MUTATED        5      0      0
  SNRNP35 WILD-TYPE    248    102     89
D172V4, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SNRNP35 MUTATED        0      7      0
  SNRNP35 WILD-TYPE    164    240    143
D172V5, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               7               240
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRNP35 MUTATED        1      2      4      0      0
  SNRNP35 WILD-TYPE    120    102     87    121    117
D172V6, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SNRNP35 MUTATED        1      6      0
  SNRNP35 WILD-TYPE    158    245    165
D172V7, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               6               245
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRNP35 MUTATED        1      6      0      0      0
  SNRNP35 WILD-TYPE    117    125    151     94     81
D172V8, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               0               151
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRNP35 MUTATED        0      3      0      1      0
  SNRNP35 WILD-TYPE    118    133    115     39     71
D172V9, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRNP35 MUTATED        0      4      0      0      0
  SNRNP35 WILD-TYPE     48    105    130    101     92
D172V10, multiclass
        clus
vv       SNRNP35 MUTATED SNRNP35 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               0               130
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(173) Variable = ZKSCAN5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZKSCAN5 MUTATED        1      0      1     11
  ZKSCAN5 WILD-TYPE    134     92    171    165
D173V1, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN5 MUTATED        9      1      2
  ZKSCAN5 WILD-TYPE    206    154    160
D173V2, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               9               206
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZKSCAN5 MUTATED        3      4      0      3
  ZKSCAN5 WILD-TYPE    132    120    125     57
D173V3, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN5 MUTATED        6      4      0
  ZKSCAN5 WILD-TYPE    247     98     89
D173V4, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               4                98
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN5 MUTATED        0      9      4
  ZKSCAN5 WILD-TYPE    164    238    139
D173V5, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               9               238
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN5 MUTATED        0      5      6      0      2
  ZKSCAN5 WILD-TYPE    121     99     85    121    115
D173V6, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               5                99
  CLUS_3               6                85
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN5 MUTATED        0     11      2
  ZKSCAN5 WILD-TYPE    159    240    163
D173V7, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              11               240
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN5 MUTATED        1      6      6      0      0
  ZKSCAN5 WILD-TYPE    117    125    145     94     81
D173V8, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN5 MUTATED        0      4      1      0      6
  ZKSCAN5 WILD-TYPE    118    132    114     40     65
D173V9, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN5 MUTATED        0      5      5      1      0
  ZKSCAN5 WILD-TYPE     48    104    125    100     92
D173V10, multiclass
        clus
vv       ZKSCAN5 MUTATED ZKSCAN5 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(174) Variable = CELSR1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CELSR1 MUTATED        5      3      8     29
  CELSR1 WILD-TYPE    130     89    164    147
D174V1, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              3               89
  CLUS_3              8              164
  CLUS_4             29              147
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CELSR1 MUTATED       25      5      8
  CELSR1 WILD-TYPE    190    150    154
D174V2, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1             25              190
  CLUS_2              5              150
  CLUS_3              8              154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CELSR1 MUTATED       17      9      6      3
  CELSR1 WILD-TYPE    118    115    119     57
D174V3, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1             17              118
  CLUS_2              9              115
  CLUS_3              6              119
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CELSR1 MUTATED       23      8      4
  CELSR1 WILD-TYPE    230     94     85
D174V4, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1             23              230
  CLUS_2              8               94
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CELSR1 MUTATED        6     26     11
  CELSR1 WILD-TYPE    158    221    132
D174V5, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             26              221
  CLUS_3             11              132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CELSR1 MUTATED        5     11     14      3     10
  CELSR1 WILD-TYPE    116     93     77    118    107
D174V6, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              5              116
  CLUS_2             11               93
  CLUS_3             14               77
  CLUS_4              3              118
  CLUS_5             10              107
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CELSR1 MUTATED        5     30     10
  CELSR1 WILD-TYPE    154    221    155
D174V7, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             30              221
  CLUS_3             10              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CELSR1 MUTATED        9     14     17      2      3
  CELSR1 WILD-TYPE    109    117    134     92     78
D174V8, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              9              109
  CLUS_2             14              117
  CLUS_3             17              134
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CELSR1 MUTATED        2     12      5      3     11
  CELSR1 WILD-TYPE    116    124    110     37     60
D174V9, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             12              124
  CLUS_3              5              110
  CLUS_4              3               37
  CLUS_5             11               60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CELSR1 MUTATED        0     10     15      7      1
  CELSR1 WILD-TYPE     48     99    115     94     91
D174V10, multiclass
        clus
vv       CELSR1 MUTATED CELSR1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2             10               99
  CLUS_3             15              115
  CLUS_4              7               94
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(175) Variable = CBLL1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBLL1 MUTATED        2      0      0      6
  CBLL1 WILD-TYPE    133     92    172    170
D175V1, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLL1 MUTATED        5      0      1
  CBLL1 WILD-TYPE    210    155    161
D175V2, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBLL1 MUTATED        3      0      4      0
  CBLL1 WILD-TYPE    132    124    121     60
D175V3, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0             124
  CLUS_3             4             121
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLL1 MUTATED        4      0      3
  CBLL1 WILD-TYPE    249    102     86
D175V4, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLL1 MUTATED        0      4      4
  CBLL1 WILD-TYPE    164    243    139
D175V5, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLL1 MUTATED        0      2      2      0      4
  CBLL1 WILD-TYPE    121    102     89    121    113
D175V6, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLL1 MUTATED        0      3      5
  CBLL1 WILD-TYPE    159    248    160
D175V7, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLL1 MUTATED        2      2      1      0      3
  CBLL1 WILD-TYPE    116    129    150     94     78
D175V8, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             129
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLL1 MUTATED        0      1      3      0      1
  CBLL1 WILD-TYPE    118    135    112     40     70
D175V9, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLL1 MUTATED        0      1      2      2      0
  CBLL1 WILD-TYPE     48    108    128     99     92
D175V10, multiclass
        clus
vv       CBLL1 MUTATED CBLL1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(176) Variable = NPHP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NPHP1 MUTATED        1      0      1     10
  NPHP1 WILD-TYPE    134     92    171    166
D176V1, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHP1 MUTATED        6      1      1
  NPHP1 WILD-TYPE    209    154    161
D176V2, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NPHP1 MUTATED        1      5      2      0
  NPHP1 WILD-TYPE    134    119    123     60
D176V3, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHP1 MUTATED        4      3      1
  NPHP1 WILD-TYPE    249     99     88
D176V4, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHP1 MUTATED        2      6      3
  NPHP1 WILD-TYPE    162    241    140
D176V5, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHP1 MUTATED        1      1      5      2      2
  NPHP1 WILD-TYPE    120    103     86    119    115
D176V6, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHP1 MUTATED        3      8      1
  NPHP1 WILD-TYPE    156    243    164
D176V7, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHP1 MUTATED        1      3      7      1      0
  NPHP1 WILD-TYPE    117    128    144     93     81
D176V8, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHP1 MUTATED        1      3      1      0      1
  NPHP1 WILD-TYPE    117    133    114     40     70
D176V9, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHP1 MUTATED        0      3      2      0      1
  NPHP1 WILD-TYPE     48    106    128    101     91
D176V10, multiclass
        clus
vv       NPHP1 MUTATED NPHP1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(177) Variable = CCDC88A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC88A MUTATED        2      3      5     20
  CCDC88A WILD-TYPE    133     89    167    156
D177V1, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3                89
  CLUS_3               5               167
  CLUS_4              20               156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC88A MUTATED       15      6      4
  CCDC88A WILD-TYPE    200    149    158
D177V2, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1              15               200
  CLUS_2               6               149
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC88A MUTATED        8     12      4      2
  CCDC88A WILD-TYPE    127    112    121     58
D177V3, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               8               127
  CLUS_2              12               112
  CLUS_3               4               121
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC88A MUTATED       11     11      4
  CCDC88A WILD-TYPE    242     91     85
D177V4, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1              11               242
  CLUS_2              11                91
  CLUS_3               4                85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC88A MUTATED        8     12     11
  CCDC88A WILD-TYPE    156    235    132
D177V5, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               8               156
  CLUS_2              12               235
  CLUS_3              11               132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC88A MUTATED        3      4     10      6      8
  CCDC88A WILD-TYPE    118    100     81    115    109
D177V6, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               3               118
  CLUS_2               4               100
  CLUS_3              10                81
  CLUS_4               6               115
  CLUS_5               8               109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC88A MUTATED        7     17      7
  CCDC88A WILD-TYPE    152    234    158
D177V7, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               7               152
  CLUS_2              17               234
  CLUS_3               7               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC88A MUTATED        2     10     11      5      3
  CCDC88A WILD-TYPE    116    121    140     89     78
D177V8, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               2               116
  CLUS_2              10               121
  CLUS_3              11               140
  CLUS_4               5                89
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC88A MUTATED        4      4      4      2      9
  CCDC88A WILD-TYPE    114    132    111     38     62
D177V9, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               4               114
  CLUS_2               4               132
  CLUS_3               4               111
  CLUS_4               2                38
  CLUS_5               9                62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC88A MUTATED        2      7      9      1      4
  CCDC88A WILD-TYPE     46    102    121    100     88
D177V10, multiclass
        clus
vv       CCDC88A MUTATED CCDC88A WILD-TYPE
  CLUS_1               2                46
  CLUS_2               7               102
  CLUS_3               9               121
  CLUS_4               1               100
  CLUS_5               4                88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(178) Variable = DTX3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DTX3 MUTATED        1      1      0      4
  DTX3 WILD-TYPE    134     91    172    172
D178V1, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DTX3 MUTATED        4      1      1
  DTX3 WILD-TYPE    211    154    161
D178V2, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DTX3 MUTATED        1      4      0      0
  DTX3 WILD-TYPE    134    120    125     60
D178V3, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DTX3 MUTATED        3      2      0
  DTX3 WILD-TYPE    250    100     89
D178V4, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DTX3 MUTATED        1      2      3
  DTX3 WILD-TYPE    163    245    140
D178V5, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTX3 MUTATED        2      0      3      0      1
  DTX3 WILD-TYPE    119    104     88    121    116
D178V6, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DTX3 MUTATED        1      5      1
  DTX3 WILD-TYPE    158    246    164
D178V7, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTX3 MUTATED        1      3      2      0      1
  DTX3 WILD-TYPE    117    128    149     94     80
D178V8, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTX3 MUTATED        1      3      0      0      2
  DTX3 WILD-TYPE    117    133    115     40     69
D178V9, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTX3 MUTATED        1      3      1      1      0
  DTX3 WILD-TYPE     47    106    129    100     92
D178V10, multiclass
        clus
vv       DTX3 MUTATED DTX3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(179) Variable = ZNF43 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF43 MUTATED        4      5      5     17
  ZNF43 WILD-TYPE    131     87    167    159
D179V1, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5              87
  CLUS_3             5             167
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF43 MUTATED       17      2      8
  ZNF43 WILD-TYPE    198    153    154
D179V2, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1            17             198
  CLUS_2             2             153
  CLUS_3             8             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF43 MUTATED       10      7      5      5
  ZNF43 WILD-TYPE    125    117    120     55
D179V3, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             7             117
  CLUS_3             5             120
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF43 MUTATED       20      3      4
  ZNF43 WILD-TYPE    233     99     85
D179V4, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1            20             233
  CLUS_2             3              99
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF43 MUTATED        5     15      9
  ZNF43 WILD-TYPE    159    232    134
D179V5, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            15             232
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF43 MUTATED        2      6     12      3      6
  ZNF43 WILD-TYPE    119     98     79    118    111
D179V6, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             6              98
  CLUS_3            12              79
  CLUS_4             3             118
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF43 MUTATED        1     24      5
  ZNF43 WILD-TYPE    158    227    160
D179V7, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            24             227
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF43 MUTATED        2     11     15      1      1
  ZNF43 WILD-TYPE    116    120    136     93     80
D179V8, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            11             120
  CLUS_3            15             136
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF43 MUTATED        1      8      3      3      8
  ZNF43 WILD-TYPE    117    128    112     37     63
D179V9, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             3             112
  CLUS_4             3              37
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF43 MUTATED        1      6     10      5      1
  ZNF43 WILD-TYPE     47    103    120     96     91
D179V10, multiclass
        clus
vv       ZNF43 MUTATED ZNF43 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3            10             120
  CLUS_4             5              96
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(180) Variable = GLT6D1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLT6D1 MUTATED        3      2      3      7
  GLT6D1 WILD-TYPE    132     90    169    169
D180V1, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT6D1 MUTATED        7      2      5
  GLT6D1 WILD-TYPE    208    153    157
D180V2, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              2              153
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLT6D1 MUTATED        6      1      2      2
  GLT6D1 WILD-TYPE    129    123    123     58
D180V3, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              1              123
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT6D1 MUTATED        9      2      0
  GLT6D1 WILD-TYPE    244    100     89
D180V4, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT6D1 MUTATED        2      5      8
  GLT6D1 WILD-TYPE    162    242    135
D180V5, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT6D1 MUTATED        2      2      5      0      6
  GLT6D1 WILD-TYPE    119    102     86    121    111
D180V6, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT6D1 MUTATED        1      8      6
  GLT6D1 WILD-TYPE    158    243    159
D180V7, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT6D1 MUTATED        3      2      6      0      4
  GLT6D1 WILD-TYPE    115    129    145     94     77
D180V8, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              2              129
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT6D1 MUTATED        0      2      4      0      3
  GLT6D1 WILD-TYPE    118    134    111     40     68
D180V9, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              4              111
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT6D1 MUTATED        1      1      5      2      0
  GLT6D1 WILD-TYPE     47    108    125     99     92
D180V10, multiclass
        clus
vv       GLT6D1 MUTATED GLT6D1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(181) Variable = TAC4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAC4 MUTATED        0      1      0      3
  TAC4 WILD-TYPE    135     91    172    173
D181V1, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAC4 MUTATED        3      0      1
  TAC4 WILD-TYPE    212    155    161
D181V2, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAC4 MUTATED        0      2      0      0
  TAC4 WILD-TYPE    135    122    125     60
D181V3, multiclass
[1] "Remove cluster labels:" "TAC4 MUTATED"          
clus
  TAC4 MUTATED TAC4 WILD-TYPE 
             2            442 
    TCGA-2H-A9GF     TCGA-2H-A9GI     TCGA-2H-A9GL     TCGA-2H-A9GQ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-2H-A9GR     TCGA-B7-5816     TCGA-B7-5818     TCGA-B7-A5TI 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-B7-A5TJ     TCGA-B7-A5TK     TCGA-B7-A5TN     TCGA-BR-4183 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4184     TCGA-BR-4187     TCGA-BR-4188     TCGA-BR-4191 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4201     TCGA-BR-4253     TCGA-BR-4255     TCGA-BR-4256 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4257     TCGA-BR-4267     TCGA-BR-4279     TCGA-BR-4280 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4292     TCGA-BR-4294     TCGA-BR-4357     TCGA-BR-4361 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4362     TCGA-BR-4363     TCGA-BR-4366     TCGA-BR-4368 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4369     TCGA-BR-4370     TCGA-BR-4371     TCGA-BR-6452 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6453     TCGA-BR-6454     TCGA-BR-6455     TCGA-BR-6456 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6457     TCGA-BR-6458     TCGA-BR-6564     TCGA-BR-6565 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6566     TCGA-BR-6705     TCGA-BR-6706     TCGA-BR-6707 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6709     TCGA-BR-6710     TCGA-BR-6801     TCGA-BR-6802 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6803     TCGA-BR-6852     TCGA-BR-7196     TCGA-BR-7197 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-7703     TCGA-BR-7704     TCGA-BR-7715     TCGA-BR-7716 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-7717     TCGA-BR-7722     TCGA-BR-7723     TCGA-BR-7851 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-7901     TCGA-BR-7957     TCGA-BR-7958     TCGA-BR-7959 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8058     TCGA-BR-8059     TCGA-BR-8060     TCGA-BR-8080 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8081     TCGA-BR-8284     TCGA-BR-8285     TCGA-BR-8286 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8289     TCGA-BR-8291     TCGA-BR-8295     TCGA-BR-8297 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8360     TCGA-BR-8361     TCGA-BR-8363     TCGA-BR-8364 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8365     TCGA-BR-8366     TCGA-BR-8367     TCGA-BR-8368 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8369     TCGA-BR-8370     TCGA-BR-8371     TCGA-BR-8372 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8380     TCGA-BR-8381     TCGA-BR-8382     TCGA-BR-8384 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8483     TCGA-BR-8484     TCGA-BR-8485     TCGA-BR-8486 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8588     TCGA-BR-8589     TCGA-BR-8590     TCGA-BR-8591 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8592     TCGA-BR-8676     TCGA-BR-8677     TCGA-BR-8678 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8679     TCGA-BR-8680     TCGA-BR-8682     TCGA-BR-8683 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8686     TCGA-BR-8687     TCGA-BR-8690     TCGA-BR-A44T 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A44U     TCGA-BR-A452     TCGA-BR-A453     TCGA-BR-A4CQ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4CR     TCGA-BR-A4CS     TCGA-BR-A4IU     TCGA-BR-A4IV 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4IY     TCGA-BR-A4IZ     TCGA-BR-A4J1     TCGA-BR-A4J2 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4J4     TCGA-BR-A4J5     TCGA-BR-A4J6     TCGA-BR-A4J7 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4J8     TCGA-BR-A4PD     TCGA-BR-A4PE     TCGA-BR-A4PF 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4QI     TCGA-BR-A4QL     TCGA-BR-A4QM     TCGA-CD-5798 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-5799     TCGA-CD-5800     TCGA-CD-5801     TCGA-CD-5802 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-5803     TCGA-CD-5804     TCGA-CD-5813     TCGA-CD-8524 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-8525     TCGA-CD-8526     TCGA-CD-8527     TCGA-CD-8528 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-8529     TCGA-CD-8530     TCGA-CD-8531     TCGA-CD-8532 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-8533     TCGA-CD-8534     TCGA-CD-8535     TCGA-CD-8536 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-A486     TCGA-CD-A487     TCGA-CD-A489     TCGA-CD-A48A 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-A48C     TCGA-CD-A4MG     TCGA-CD-A4MH     TCGA-CD-A4MI 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-A4MJ     TCGA-CG-4300     TCGA-CG-4301     TCGA-CG-4304 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4305     TCGA-CG-4306     TCGA-CG-4436     TCGA-CG-4437 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4438     TCGA-CG-4442     TCGA-CG-4443     TCGA-CG-4444 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4449     TCGA-CG-4455     TCGA-CG-4460     TCGA-CG-4465 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4466     TCGA-CG-4469     TCGA-CG-4474     TCGA-CG-4475 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4476     TCGA-CG-4477     TCGA-CG-5716     TCGA-CG-5717 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5718     TCGA-CG-5719     TCGA-CG-5720     TCGA-CG-5721 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5724     TCGA-CG-5725     TCGA-CG-5726     TCGA-CG-5727 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5728     TCGA-CG-5730     TCGA-CG-5732     TCGA-CG-5733 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5734     TCGA-D7-5577     TCGA-D7-5578     TCGA-D7-5579 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6518     TCGA-D7-6519     TCGA-D7-6520     TCGA-D7-6521 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6522     TCGA-D7-6524     TCGA-D7-6525     TCGA-D7-6527 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6528     TCGA-D7-6815     TCGA-D7-6817     TCGA-D7-6818 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6820     TCGA-D7-6822     TCGA-D7-8570     TCGA-D7-8572 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-8573     TCGA-D7-8574     TCGA-D7-8575     TCGA-D7-8578 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-A4YT     TCGA-D7-A4YU     TCGA-D7-A4YV     TCGA-D7-A4YX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-A4YY     TCGA-D7-A4Z0     TCGA-D7-A6EV     TCGA-D7-A6EX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-A6EY     TCGA-D7-A6EZ     TCGA-D7-A6F0     TCGA-D7-A748 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-EQ-8122     TCGA-EQ-A4SO     TCGA-F1-6177     TCGA-F1-6874 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-F1-6875     TCGA-F1-A448     TCGA-F1-A72C     TCGA-FP-7916 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-FP-7998     TCGA-HF-7131     TCGA-HF-7132     TCGA-HF-7133 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HF-7134     TCGA-HF-7136     TCGA-HF-A5NB     TCGA-HJ-7597 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-8602     TCGA-HU-8608     TCGA-HU-8610     TCGA-HU-A4GF 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-A4GQ     TCGA-HU-A4GT     TCGA-HU-A4GU     TCGA-HU-A4GX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-A4GY     TCGA-HU-A4H2     TCGA-HU-A4H3     TCGA-HU-A4H4 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-A4H5     TCGA-HU-A4HD     TCGA-IC-A6RE     TCGA-IC-A6RF 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A3I8     TCGA-IG-A3QL     TCGA-IG-A3Y9     TCGA-IG-A3YA 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A3YB     TCGA-IG-A3YC     TCGA-IG-A4P3     TCGA-IG-A4QS 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A4QT     TCGA-IG-A50L     TCGA-IG-A51D     TCGA-IG-A5B8 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A5S3     TCGA-IG-A625     TCGA-IG-A6QS     TCGA-IG-A8O2 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A97H     TCGA-IG-A97I     TCGA-IN-7806     TCGA-IN-7808 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-8462     TCGA-IN-8663     TCGA-IN-A6RI     TCGA-IN-A6RL 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-A6RN     TCGA-IN-A6RO     TCGA-IN-A6RR     TCGA-IN-A6RS 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-A7NR     TCGA-IN-A7NT     TCGA-IN-A7NU     TCGA-IN-AB1V 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-AB1X     TCGA-IP-7968     TCGA-JY-A6F8     TCGA-JY-A6FA 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-JY-A6FB     TCGA-JY-A6FD     TCGA-JY-A6FE     TCGA-JY-A6FG 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-JY-A939     TCGA-JY-A93E     TCGA-JY-A93F     TCGA-KB-A6F5 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-KB-A93G     TCGA-L5-A43C     TCGA-L5-A43E     TCGA-L5-A43H 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A43I     TCGA-L5-A43J     TCGA-L5-A43M     TCGA-L5-A4OE 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4OF     TCGA-L5-A4OG     TCGA-L5-A4OH     TCGA-L5-A4OJ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4ON     TCGA-L5-A4OP     TCGA-L5-A4OQ     TCGA-L5-A4OR 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4OS     TCGA-L5-A4OT     TCGA-L5-A4OU     TCGA-L5-A4OW 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4OX     TCGA-L5-A88W     TCGA-L5-A891     TCGA-L5-A8NE 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A8NF     TCGA-L5-A8NI     TCGA-L5-A8NJ     TCGA-L5-A8NK 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A8NL     TCGA-L5-A8NQ     TCGA-L5-A8NS     TCGA-L5-A8NT 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A8NV     TCGA-L5-A8NW     TCGA-L7-A56G     TCGA-L7-A6VZ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49K     TCGA-LN-A49L     TCGA-LN-A49M     TCGA-LN-A49N 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49O     TCGA-LN-A49P     TCGA-LN-A49R     TCGA-LN-A49S 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49U     TCGA-LN-A49V     TCGA-LN-A49W     TCGA-LN-A49X 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49Y     TCGA-LN-A4A1     TCGA-LN-A4A2     TCGA-LN-A4A3 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A4A4     TCGA-LN-A4A5     TCGA-LN-A4A6     TCGA-LN-A4A8 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A4A9     TCGA-LN-A4MQ     TCGA-LN-A4MR     TCGA-LN-A5U5 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A5U6     TCGA-LN-A5U7     TCGA-LN-A7HW     TCGA-LN-A7HX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A7HY     TCGA-LN-A7HZ     TCGA-LN-A8HZ     TCGA-LN-A8I0 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A8I1     TCGA-LN-A9FO     TCGA-LN-A9FP     TCGA-LN-A9FQ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A9FR     TCGA-M9-A5M8     TCGA-MX-A5UG     TCGA-Q9-A6FU 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-Q9-A6FW     TCGA-RD-A7BS     TCGA-RD-A7BT     TCGA-RD-A7BW 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-RD-A7C1     TCGA-RD-A8MV     TCGA-RD-A8MW     TCGA-RD-A8N0 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-RD-A8N1     TCGA-RE-A7BO     TCGA-S8-A6BV     TCGA-S8-A6BW 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-SW-A7EA     TCGA-SW-A7EB     TCGA-VQ-A8DL     TCGA-VQ-A8DT 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-A8DU     TCGA-VQ-A8E2     TCGA-VQ-A8E7     TCGA-VQ-A8P2 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-A8P3     TCGA-VQ-A8PE     TCGA-VQ-A8PK     TCGA-VQ-A8PM 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-A8PQ     TCGA-VQ-A91U     TCGA-VQ-A91V     TCGA-VQ-A92D 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-AA64     TCGA-VQ-AA69     TCGA-VQ-AA6A     TCGA-VQ-AA6B 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-AA6F     TCGA-VQ-AA6G     TCGA-VQ-AA6I     TCGA-VQ-AA6K 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VR-A8EO     TCGA-VR-A8EP     TCGA-VR-A8EQ     TCGA-VR-A8Q7 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VR-AA4D     TCGA-VR-AA7B     TCGA-X8-AAAR     TCGA-XP-A8T6 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-XP-A8T7     TCGA-Z6-A8JD     TCGA-Z6-A8JE     TCGA-Z6-A9VB 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-Z6-AAPN     TCGA-ZA-A8F6 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAC4 MUTATED        1      1      0
  TAC4 WILD-TYPE    252    101     89
D181V4, multiclass
[1] "Remove cluster labels:" "TAC4 MUTATED"          
clus
  TAC4 MUTATED TAC4 WILD-TYPE 
             2            442 
    TCGA-2H-A9GF     TCGA-2H-A9GI     TCGA-2H-A9GL     TCGA-2H-A9GQ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-2H-A9GR     TCGA-B7-5816     TCGA-B7-5818     TCGA-B7-A5TI 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-B7-A5TJ     TCGA-B7-A5TK     TCGA-B7-A5TN     TCGA-BR-4183 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4184     TCGA-BR-4187     TCGA-BR-4188     TCGA-BR-4191 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4201     TCGA-BR-4253     TCGA-BR-4255     TCGA-BR-4256 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4257     TCGA-BR-4267     TCGA-BR-4279     TCGA-BR-4280 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4292     TCGA-BR-4294     TCGA-BR-4357     TCGA-BR-4361 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4362     TCGA-BR-4363     TCGA-BR-4366     TCGA-BR-4368 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-4369     TCGA-BR-4370     TCGA-BR-4371     TCGA-BR-6452 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6453     TCGA-BR-6454     TCGA-BR-6455     TCGA-BR-6456 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6457     TCGA-BR-6458     TCGA-BR-6564     TCGA-BR-6565 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6566     TCGA-BR-6705     TCGA-BR-6706     TCGA-BR-6707 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6709     TCGA-BR-6710     TCGA-BR-6801     TCGA-BR-6802 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-6803     TCGA-BR-6852     TCGA-BR-7196     TCGA-BR-7197 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-7703     TCGA-BR-7704     TCGA-BR-7715     TCGA-BR-7716 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-7717     TCGA-BR-7722     TCGA-BR-7723     TCGA-BR-7851 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-7901     TCGA-BR-7957     TCGA-BR-7958     TCGA-BR-7959 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8058     TCGA-BR-8059     TCGA-BR-8060     TCGA-BR-8080 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8081     TCGA-BR-8284     TCGA-BR-8285     TCGA-BR-8286 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8289     TCGA-BR-8291     TCGA-BR-8295     TCGA-BR-8297 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8360     TCGA-BR-8361     TCGA-BR-8363     TCGA-BR-8364 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8365     TCGA-BR-8366     TCGA-BR-8367     TCGA-BR-8368 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8369     TCGA-BR-8370     TCGA-BR-8371     TCGA-BR-8372 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8380     TCGA-BR-8381     TCGA-BR-8382     TCGA-BR-8384 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8483     TCGA-BR-8484     TCGA-BR-8485     TCGA-BR-8486 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8588     TCGA-BR-8589     TCGA-BR-8590     TCGA-BR-8591 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8592     TCGA-BR-8676     TCGA-BR-8677     TCGA-BR-8678 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8679     TCGA-BR-8680     TCGA-BR-8682     TCGA-BR-8683 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-8686     TCGA-BR-8687     TCGA-BR-8690     TCGA-BR-A44T 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A44U     TCGA-BR-A452     TCGA-BR-A453     TCGA-BR-A4CQ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4CR     TCGA-BR-A4CS     TCGA-BR-A4IU     TCGA-BR-A4IV 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4IY     TCGA-BR-A4IZ     TCGA-BR-A4J1     TCGA-BR-A4J2 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4J4     TCGA-BR-A4J5     TCGA-BR-A4J6     TCGA-BR-A4J7 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4J8     TCGA-BR-A4PD     TCGA-BR-A4PE     TCGA-BR-A4PF 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-BR-A4QI     TCGA-BR-A4QL     TCGA-BR-A4QM     TCGA-CD-5798 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-5799     TCGA-CD-5800     TCGA-CD-5801     TCGA-CD-5802 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-5803     TCGA-CD-5804     TCGA-CD-5813     TCGA-CD-8524 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-8525     TCGA-CD-8526     TCGA-CD-8527     TCGA-CD-8528 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-8529     TCGA-CD-8530     TCGA-CD-8531     TCGA-CD-8532 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-8533     TCGA-CD-8534     TCGA-CD-8535     TCGA-CD-8536 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-A486     TCGA-CD-A487     TCGA-CD-A489     TCGA-CD-A48A 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-A48C     TCGA-CD-A4MG     TCGA-CD-A4MH     TCGA-CD-A4MI 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CD-A4MJ     TCGA-CG-4300     TCGA-CG-4301     TCGA-CG-4304 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4305     TCGA-CG-4306     TCGA-CG-4436     TCGA-CG-4437 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4438     TCGA-CG-4442     TCGA-CG-4443     TCGA-CG-4444 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4449     TCGA-CG-4455     TCGA-CG-4460     TCGA-CG-4465 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4466     TCGA-CG-4469     TCGA-CG-4474     TCGA-CG-4475 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-4476     TCGA-CG-4477     TCGA-CG-5716     TCGA-CG-5717 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5718     TCGA-CG-5719     TCGA-CG-5720     TCGA-CG-5721 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5724     TCGA-CG-5725     TCGA-CG-5726     TCGA-CG-5727 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5728     TCGA-CG-5730     TCGA-CG-5732     TCGA-CG-5733 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-CG-5734     TCGA-D7-5577     TCGA-D7-5578     TCGA-D7-5579 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6518     TCGA-D7-6519     TCGA-D7-6520     TCGA-D7-6521 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6522     TCGA-D7-6524     TCGA-D7-6525     TCGA-D7-6527 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6528     TCGA-D7-6815     TCGA-D7-6817     TCGA-D7-6818 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-6820     TCGA-D7-6822     TCGA-D7-8570     TCGA-D7-8572 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-8573     TCGA-D7-8574     TCGA-D7-8575     TCGA-D7-8578 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-A4YT     TCGA-D7-A4YU     TCGA-D7-A4YV     TCGA-D7-A4YX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-A4YY     TCGA-D7-A4Z0     TCGA-D7-A6EV     TCGA-D7-A6EX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-D7-A6EY     TCGA-D7-A6EZ     TCGA-D7-A6F0     TCGA-D7-A748 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-EQ-8122     TCGA-EQ-A4SO     TCGA-F1-6177     TCGA-F1-6874 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-F1-6875     TCGA-F1-A448     TCGA-F1-A72C     TCGA-FP-7916 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-FP-7998     TCGA-HF-7131     TCGA-HF-7132     TCGA-HF-7133 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HF-7134     TCGA-HF-7136     TCGA-HF-A5NB     TCGA-HJ-7597 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-8602     TCGA-HU-8608     TCGA-HU-8610     TCGA-HU-A4GF 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-A4GQ     TCGA-HU-A4GT     TCGA-HU-A4GU     TCGA-HU-A4GX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-A4GY     TCGA-HU-A4H2     TCGA-HU-A4H3     TCGA-HU-A4H4 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-HU-A4H5     TCGA-HU-A4HD     TCGA-IC-A6RE     TCGA-IC-A6RF 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A3I8     TCGA-IG-A3QL     TCGA-IG-A3Y9     TCGA-IG-A3YA 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A3YB     TCGA-IG-A3YC     TCGA-IG-A4P3     TCGA-IG-A4QS 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A4QT     TCGA-IG-A50L     TCGA-IG-A51D     TCGA-IG-A5B8 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A5S3     TCGA-IG-A625     TCGA-IG-A6QS     TCGA-IG-A8O2 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IG-A97H     TCGA-IG-A97I     TCGA-IN-7806     TCGA-IN-7808 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-8462     TCGA-IN-8663     TCGA-IN-A6RI     TCGA-IN-A6RL 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-A6RN     TCGA-IN-A6RO     TCGA-IN-A6RR     TCGA-IN-A6RS 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-A7NR     TCGA-IN-A7NT     TCGA-IN-A7NU     TCGA-IN-AB1V 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-IN-AB1X     TCGA-IP-7968     TCGA-JY-A6F8     TCGA-JY-A6FA 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-JY-A6FB     TCGA-JY-A6FD     TCGA-JY-A6FE     TCGA-JY-A6FG 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-JY-A939     TCGA-JY-A93E     TCGA-JY-A93F     TCGA-KB-A6F5 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-KB-A93G     TCGA-L5-A43C     TCGA-L5-A43E     TCGA-L5-A43H 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A43I     TCGA-L5-A43J     TCGA-L5-A43M     TCGA-L5-A4OE 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4OF     TCGA-L5-A4OG     TCGA-L5-A4OH     TCGA-L5-A4OJ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4ON     TCGA-L5-A4OP     TCGA-L5-A4OQ     TCGA-L5-A4OR 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4OS     TCGA-L5-A4OT     TCGA-L5-A4OU     TCGA-L5-A4OW 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A4OX     TCGA-L5-A88W     TCGA-L5-A891     TCGA-L5-A8NE 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A8NF     TCGA-L5-A8NI     TCGA-L5-A8NJ     TCGA-L5-A8NK 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A8NL     TCGA-L5-A8NQ     TCGA-L5-A8NS     TCGA-L5-A8NT 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-L5-A8NV     TCGA-L5-A8NW     TCGA-L7-A56G     TCGA-L7-A6VZ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49K     TCGA-LN-A49L     TCGA-LN-A49M     TCGA-LN-A49N 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49O     TCGA-LN-A49P     TCGA-LN-A49R     TCGA-LN-A49S 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49U     TCGA-LN-A49V     TCGA-LN-A49W     TCGA-LN-A49X 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A49Y     TCGA-LN-A4A1     TCGA-LN-A4A2     TCGA-LN-A4A3 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A4A4     TCGA-LN-A4A5     TCGA-LN-A4A6     TCGA-LN-A4A8 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A4A9     TCGA-LN-A4MQ     TCGA-LN-A4MR     TCGA-LN-A5U5 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A5U6     TCGA-LN-A5U7     TCGA-LN-A7HW     TCGA-LN-A7HX 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A7HY     TCGA-LN-A7HZ     TCGA-LN-A8HZ     TCGA-LN-A8I0 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A8I1     TCGA-LN-A9FO     TCGA-LN-A9FP     TCGA-LN-A9FQ 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-LN-A9FR     TCGA-M9-A5M8     TCGA-MX-A5UG     TCGA-Q9-A6FU 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-Q9-A6FW     TCGA-RD-A7BS     TCGA-RD-A7BT     TCGA-RD-A7BW 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-RD-A7C1     TCGA-RD-A8MV     TCGA-RD-A8MW     TCGA-RD-A8N0 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-RD-A8N1     TCGA-RE-A7BO     TCGA-S8-A6BV     TCGA-S8-A6BW 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-SW-A7EA     TCGA-SW-A7EB     TCGA-VQ-A8DL     TCGA-VQ-A8DT 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-A8DU     TCGA-VQ-A8E2     TCGA-VQ-A8E7     TCGA-VQ-A8P2 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-A8P3     TCGA-VQ-A8PE     TCGA-VQ-A8PK     TCGA-VQ-A8PM 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-A8PQ     TCGA-VQ-A91U     TCGA-VQ-A91V     TCGA-VQ-A92D 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-AA64     TCGA-VQ-AA69     TCGA-VQ-AA6A     TCGA-VQ-AA6B 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VQ-AA6F     TCGA-VQ-AA6G     TCGA-VQ-AA6I     TCGA-VQ-AA6K 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VR-A8EO     TCGA-VR-A8EP     TCGA-VR-A8EQ     TCGA-VR-A8Q7 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-VR-AA4D     TCGA-VR-AA7B     TCGA-X8-AAAR     TCGA-XP-A8T6 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-XP-A8T7     TCGA-Z6-A8JD     TCGA-Z6-A8JE     TCGA-Z6-A9VB 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
    TCGA-Z6-AAPN     TCGA-ZA-A8F6 
"TAC4 WILD-TYPE" "TAC4 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAC4 MUTATED        1      3      0
  TAC4 WILD-TYPE    163    244    143
D181V5, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAC4 MUTATED        0      1      2      0      1
  TAC4 WILD-TYPE    121    103     89    121    116
D181V6, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAC4 MUTATED        0      3      1
  TAC4 WILD-TYPE    159    248    164
D181V7, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            3            248
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAC4 MUTATED        0      2      2      0      0
  TAC4 WILD-TYPE    118    129    149     94     81
D181V8, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAC4 MUTATED        0      3      0      0      1
  TAC4 WILD-TYPE    118    133    115     40     70
D181V9, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAC4 MUTATED        0      1      3      0      0
  TAC4 WILD-TYPE     48    108    127    101     92
D181V10, multiclass
        clus
vv       TAC4 MUTATED TAC4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(182) Variable = CCDC108 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC108 MUTATED        0      2      5     21
  CCDC108 WILD-TYPE    135     90    167    155
D182V1, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               5               167
  CLUS_4              21               155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC108 MUTATED       18      3      3
  CCDC108 WILD-TYPE    197    152    159
D182V2, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1              18               197
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC108 MUTATED       10     10      0      2
  CCDC108 WILD-TYPE    125    114    125     58
D182V3, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1              10               125
  CLUS_2              10               114
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC108 MUTATED       17      5      0
  CCDC108 WILD-TYPE    236     97     89
D182V4, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1              17               236
  CLUS_2               5                97
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC108 MUTATED        6     18      4
  CCDC108 WILD-TYPE    158    229    139
D182V5, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              18               229
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC108 MUTATED        1      7     14      2      4
  CCDC108 WILD-TYPE    120     97     77    119    113
D182V6, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               7                97
  CLUS_3              14                77
  CLUS_4               2               119
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC108 MUTATED        4     22      3
  CCDC108 WILD-TYPE    155    229    162
D182V7, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               4               155
  CLUS_2              22               229
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC108 MUTATED        3     16      7      2      1
  CCDC108 WILD-TYPE    115    115    144     92     80
D182V8, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              16               115
  CLUS_3               7               144
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC108 MUTATED        3     12      2      1      5
  CCDC108 WILD-TYPE    115    124    113     39     66
D182V9, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              12               124
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC108 MUTATED        1     10      7      3      2
  CCDC108 WILD-TYPE     47     99    123     98     90
D182V10, multiclass
        clus
vv       CCDC108 MUTATED CCDC108 WILD-TYPE
  CLUS_1               1                47
  CLUS_2              10                99
  CLUS_3               7               123
  CLUS_4               3                98
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(183) Variable = TNRC6C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC6C MUTATED        2      4      1     13
  TNRC6C WILD-TYPE    133     88    171    163
D183V1, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              1              171
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC6C MUTATED        9      3      5
  TNRC6C WILD-TYPE    206    152    157
D183V2, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              9              206
  CLUS_2              3              152
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNRC6C MUTATED        4      6      3      2
  TNRC6C WILD-TYPE    131    118    122     58
D183V3, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              4              131
  CLUS_2              6              118
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC6C MUTATED       10      3      2
  TNRC6C WILD-TYPE    243     99     87
D183V4, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1             10              243
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC6C MUTATED        5     14      2
  TNRC6C WILD-TYPE    159    233    141
D183V5, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              5              159
  CLUS_2             14              233
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNRC6C MUTATED        1      4     11      4      1
  TNRC6C WILD-TYPE    120    100     80    117    116
D183V6, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3             11               80
  CLUS_4              4              117
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TNRC6C MUTATED        2     16      3
  TNRC6C WILD-TYPE    157    235    162
D183V7, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              2              157
  CLUS_2             16              235
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNRC6C MUTATED        1     10      7      3      0
  TNRC6C WILD-TYPE    117    121    144     91     81
D183V8, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              1              117
  CLUS_2             10              121
  CLUS_3              7              144
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNRC6C MUTATED        2      7      2      0      4
  TNRC6C WILD-TYPE    116    129    113     40     67
D183V9, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              129
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNRC6C MUTATED        0      6      6      0      3
  TNRC6C WILD-TYPE     48    103    124    101     89
D183V10, multiclass
        clus
vv       TNRC6C MUTATED TNRC6C WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              6              124
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(184) Variable = TATDN1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TATDN1 MUTATED        0      0      0      6
  TATDN1 WILD-TYPE    135     92    172    170
D184V1, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TATDN1 MUTATED        4      0      2
  TATDN1 WILD-TYPE    211    155    160
D184V2, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TATDN1 MUTATED        2      0      1      1
  TATDN1 WILD-TYPE    133    124    124     59
D184V3, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0              124
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TATDN1 MUTATED        3      0      1
  TATDN1 WILD-TYPE    250    102     88
D184V4, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TATDN1 MUTATED        0      2      4
  TATDN1 WILD-TYPE    164    245    139
D184V5, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              2              245
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TATDN1 MUTATED        0      1      2      0      3
  TATDN1 WILD-TYPE    121    103     89    121    114
D184V6, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TATDN1 MUTATED        0      3      3
  TATDN1 WILD-TYPE    159    248    162
D184V7, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              3              248
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TATDN1 MUTATED        0      2      2      0      2
  TATDN1 WILD-TYPE    118    129    149     94     79
D184V8, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TATDN1 MUTATED        0      0      2      0      2
  TATDN1 WILD-TYPE    118    136    113     40     69
D184V9, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              0              136
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TATDN1 MUTATED        0      0      3      1      0
  TATDN1 WILD-TYPE     48    109    127    100     92
D184V10, multiclass
        clus
vv       TATDN1 MUTATED TATDN1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              0              109
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(185) Variable = INO80D MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INO80D MUTATED        3      1      4     15
  INO80D WILD-TYPE    132     91    168    161
D185V1, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INO80D MUTATED        9      5      3
  INO80D WILD-TYPE    206    150    159
D185V2, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              9              206
  CLUS_2              5              150
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INO80D MUTATED        9     10      1      0
  INO80D WILD-TYPE    126    114    124     60
D185V3, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              9              126
  CLUS_2             10              114
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INO80D MUTATED       13      6      1
  INO80D WILD-TYPE    240     96     88
D185V4, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1             13              240
  CLUS_2              6               96
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INO80D MUTATED        7     11      5
  INO80D WILD-TYPE    157    236    138
D185V5, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              7              157
  CLUS_2             11              236
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INO80D MUTATED        4      4      9      2      4
  INO80D WILD-TYPE    117    100     82    119    113
D185V6, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              4              117
  CLUS_2              4              100
  CLUS_3              9               82
  CLUS_4              2              119
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INO80D MUTATED        6     14      3
  INO80D WILD-TYPE    153    237    162
D185V7, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              6              153
  CLUS_2             14              237
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INO80D MUTATED        5      8      7      2      1
  INO80D WILD-TYPE    113    123    144     92     80
D185V8, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              5              113
  CLUS_2              8              123
  CLUS_3              7              144
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INO80D MUTATED        3      7      2      2      2
  INO80D WILD-TYPE    115    129    113     38     69
D185V9, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              129
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INO80D MUTATED        4      4      5      1      2
  INO80D WILD-TYPE     44    105    125    100     90
D185V10, multiclass
        clus
vv       INO80D MUTATED INO80D WILD-TYPE
  CLUS_1              4               44
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(186) Variable = WDR7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR7 MUTATED        3      2      1     22
  WDR7 WILD-TYPE    132     90    171    154
D186V1, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4           22            154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR7 MUTATED       16      3      5
  WDR7 WILD-TYPE    199    152    157
D186V2, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1           16            199
  CLUS_2            3            152
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR7 MUTATED       11      9      3      1
  WDR7 WILD-TYPE    124    115    122     59
D186V3, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1           11            124
  CLUS_2            9            115
  CLUS_3            3            122
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR7 MUTATED       16      6      2
  WDR7 WILD-TYPE    237     96     87
D186V4, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1           16            237
  CLUS_2            6             96
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR7 MUTATED        6     14      7
  WDR7 WILD-TYPE    158    233    136
D186V5, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            6            158
  CLUS_2           14            233
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR7 MUTATED        0      6     12      4      5
  WDR7 WILD-TYPE    121     98     79    117    112
D186V6, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            6             98
  CLUS_3           12             79
  CLUS_4            4            117
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR7 MUTATED        2     21      6
  WDR7 WILD-TYPE    157    230    159
D186V7, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           21            230
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR7 MUTATED        0     12     12      2      3
  WDR7 WILD-TYPE    118    119    139     92     78
D186V8, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            0            118
  CLUS_2           12            119
  CLUS_3           12            139
  CLUS_4            2             92
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR7 MUTATED        2     11      1      0      9
  WDR7 WILD-TYPE    116    125    114     40     62
D186V9, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           11            125
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            9             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR7 MUTATED        0     10      9      2      2
  WDR7 WILD-TYPE     48     99    121     99     90
D186V10, multiclass
        clus
vv       WDR7 MUTATED WDR7 WILD-TYPE
  CLUS_1            0             48
  CLUS_2           10             99
  CLUS_3            9            121
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(187) Variable = FAAH MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAAH MUTATED        0      0      2      3
  FAAH WILD-TYPE    135     92    170    173
D187V1, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FAAH MUTATED        1      1      2
  FAAH WILD-TYPE    214    154    160
D187V2, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            1            214
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAAH MUTATED        1      2      2      0
  FAAH WILD-TYPE    134    122    123     60
D187V3, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2            122
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FAAH MUTATED        2      1      2
  FAAH WILD-TYPE    251    101     87
D187V4, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            2            251
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FAAH MUTATED        0      2      3
  FAAH WILD-TYPE    164    245    140
D187V5, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            0            164
  CLUS_2            2            245
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAAH MUTATED        0      1      2      0      2
  FAAH WILD-TYPE    121    103     89    121    115
D187V6, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FAAH MUTATED        0      3      2
  FAAH WILD-TYPE    159    248    163
D187V7, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            0            159
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAAH MUTATED        1      1      2      0      1
  FAAH WILD-TYPE    117    130    149     94     80
D187V8, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            130
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAAH MUTATED        0      2      0      1      0
  FAAH WILD-TYPE    118    134    115     39     71
D187V9, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAAH MUTATED        0      1      1      1      0
  FAAH WILD-TYPE     48    108    129    100     92
D187V10, multiclass
        clus
vv       FAAH MUTATED FAAH WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(188) Variable = EFNB3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFNB3 MUTATED        1      3      0     11
  EFNB3 WILD-TYPE    134     89    172    165
D188V1, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNB3 MUTATED       11      0      3
  EFNB3 WILD-TYPE    204    155    159
D188V2, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFNB3 MUTATED        2      8      2      0
  EFNB3 WILD-TYPE    133    116    123     60
D188V3, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             8             116
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNB3 MUTATED        5      4      3
  EFNB3 WILD-TYPE    248     98     86
D188V4, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             4              98
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNB3 MUTATED        1     10      4
  EFNB3 WILD-TYPE    163    237    139
D188V5, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            10             237
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNB3 MUTATED        2      3      7      0      3
  EFNB3 WILD-TYPE    119    101     84    121    114
D188V6, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNB3 MUTATED        2     11      2
  EFNB3 WILD-TYPE    157    240    163
D188V7, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNB3 MUTATED        1      5      7      1      1
  EFNB3 WILD-TYPE    117    126    144     93     80
D188V8, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNB3 MUTATED        2      3      2      0      6
  EFNB3 WILD-TYPE    116    133    113     40     65
D188V9, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNB3 MUTATED        0      4      7      1      1
  EFNB3 WILD-TYPE     48    105    123    100     91
D188V10, multiclass
        clus
vv       EFNB3 MUTATED EFNB3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(189) Variable = MAP3K1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        0      1      4     18
  MAP3K1 WILD-TYPE    135     91    168    158
D189V1, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             18              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED       12      4      4
  MAP3K1 WILD-TYPE    203    151    158
D189V2, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              4              151
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP3K1 MUTATED        4     11      2      2
  MAP3K1 WILD-TYPE    131    113    123     58
D189V3, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2             11              113
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED       12      6      1
  MAP3K1 WILD-TYPE    241     96     88
D189V4, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              6               96
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        6      7      7
  MAP3K1 WILD-TYPE    158    240    136
D189V5, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              7              240
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP3K1 MUTATED        0      3      7      5      5
  MAP3K1 WILD-TYPE    121    101     84    116    112
D189V6, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              5              116
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP3K1 MUTATED        3     16      4
  MAP3K1 WILD-TYPE    156    235    161
D189V7, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             16              235
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP3K1 MUTATED        0      9      8      4      2
  MAP3K1 WILD-TYPE    118    122    143     90     79
D189V8, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              9              122
  CLUS_3              8              143
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP3K1 MUTATED        3      6      4      1      6
  MAP3K1 WILD-TYPE    115    130    111     39     65
D189V9, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              130
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP3K1 MUTATED        1      7      6      2      4
  MAP3K1 WILD-TYPE     47    102    124     99     88
D189V10, multiclass
        clus
vv       MAP3K1 MUTATED MAP3K1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              7              102
  CLUS_3              6              124
  CLUS_4              2               99
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(190) Variable = ZNF124 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF124 MUTATED        0      0      2      8
  ZNF124 WILD-TYPE    135     92    170    168
D190V1, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF124 MUTATED        4      1      2
  ZNF124 WILD-TYPE    211    154    160
D190V2, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF124 MUTATED        2      4      1      2
  ZNF124 WILD-TYPE    133    120    124     58
D190V3, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF124 MUTATED        6      2      1
  ZNF124 WILD-TYPE    247    100     88
D190V4, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF124 MUTATED        1      6      2
  ZNF124 WILD-TYPE    163    241    141
D190V5, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF124 MUTATED        0      2      5      0      2
  ZNF124 WILD-TYPE    121    102     86    121    115
D190V6, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF124 MUTATED        0      7      3
  ZNF124 WILD-TYPE    159    244    162
D190V7, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              7              244
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF124 MUTATED        1      3      6      0      0
  ZNF124 WILD-TYPE    117    128    145     94     81
D190V8, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF124 MUTATED        0      2      1      1      2
  ZNF124 WILD-TYPE    118    134    114     39     69
D190V9, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF124 MUTATED        0      1      4      1      0
  ZNF124 WILD-TYPE     48    108    126    100     92
D190V10, multiclass
        clus
vv       ZNF124 MUTATED ZNF124 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(191) Variable = SVIL MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SVIL MUTATED        0      3      5     26
  SVIL WILD-TYPE    135     89    167    150
D191V1, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3             89
  CLUS_3            5            167
  CLUS_4           26            150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SVIL MUTATED       18      4      6
  SVIL WILD-TYPE    197    151    156
D191V2, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1           18            197
  CLUS_2            4            151
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SVIL MUTATED       12      5      4      5
  SVIL WILD-TYPE    123    119    121     55
D191V3, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1           12            123
  CLUS_2            5            119
  CLUS_3            4            121
  CLUS_4            5             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SVIL MUTATED       19      2      5
  SVIL WILD-TYPE    234    100     84
D191V4, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1           19            234
  CLUS_2            2            100
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SVIL MUTATED        6     17      9
  SVIL WILD-TYPE    158    230    134
D191V5, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            6            158
  CLUS_2           17            230
  CLUS_3            9            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SVIL MUTATED        3      7     13      2      7
  SVIL WILD-TYPE    118     97     78    119    110
D191V6, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            3            118
  CLUS_2            7             97
  CLUS_3           13             78
  CLUS_4            2            119
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SVIL MUTATED        6     18     10
  SVIL WILD-TYPE    153    233    155
D191V7, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            6            153
  CLUS_2           18            233
  CLUS_3           10            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SVIL MUTATED        4     13     10      2      5
  SVIL WILD-TYPE    114    118    141     92     76
D191V8, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            4            114
  CLUS_2           13            118
  CLUS_3           10            141
  CLUS_4            2             92
  CLUS_5            5             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SVIL MUTATED        3     10      5      1      8
  SVIL WILD-TYPE    115    126    110     39     63
D191V9, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            3            115
  CLUS_2           10            126
  CLUS_3            5            110
  CLUS_4            1             39
  CLUS_5            8             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SVIL MUTATED        2      9     10      4      2
  SVIL WILD-TYPE     46    100    120     97     90
D191V10, multiclass
        clus
vv       SVIL MUTATED SVIL WILD-TYPE
  CLUS_1            2             46
  CLUS_2            9            100
  CLUS_3           10            120
  CLUS_4            4             97
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(192) Variable = TRMT6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRMT6 MUTATED        0      2      1      7
  TRMT6 WILD-TYPE    135     90    171    169
D192V1, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRMT6 MUTATED        5      1      3
  TRMT6 WILD-TYPE    210    154    159
D192V2, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRMT6 MUTATED        3      4      0      1
  TRMT6 WILD-TYPE    132    120    125     59
D192V3, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRMT6 MUTATED        7      1      0
  TRMT6 WILD-TYPE    246    101     89
D192V4, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRMT6 MUTATED        1      7      2
  TRMT6 WILD-TYPE    163    240    141
D192V5, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRMT6 MUTATED        1      4      2      1      2
  TRMT6 WILD-TYPE    120    100     89    120    115
D192V6, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRMT6 MUTATED        1      6      3
  TRMT6 WILD-TYPE    158    245    162
D192V7, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRMT6 MUTATED        2      4      3      1      0
  TRMT6 WILD-TYPE    116    127    148     93     81
D192V8, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRMT6 MUTATED        1      3      1      0      1
  TRMT6 WILD-TYPE    117    133    114     40     70
D192V9, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRMT6 MUTATED        0      2      3      0      1
  TRMT6 WILD-TYPE     48    107    127    101     91
D192V10, multiclass
        clus
vv       TRMT6 MUTATED TRMT6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(193) Variable = ATM MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATM MUTATED       10      9     11     29
  ATM WILD-TYPE    125     83    161    147
D193V1, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1          10           125
  CLUS_2           9            83
  CLUS_3          11           161
  CLUS_4          29           147
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ATM MUTATED       25      9     20
  ATM WILD-TYPE    190    146    142
D193V2, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1          25           190
  CLUS_2           9           146
  CLUS_3          20           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATM MUTATED       14     19      9      5
  ATM WILD-TYPE    121    105    116     55
D193V3, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1          14           121
  CLUS_2          19           105
  CLUS_3           9           116
  CLUS_4           5            55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ATM MUTATED       26     14      7
  ATM WILD-TYPE    227     88     82
D193V4, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1          26           227
  CLUS_2          14            88
  CLUS_3           7            82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ATM MUTATED       14     28     15
  ATM WILD-TYPE    150    219    128
D193V5, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1          14           150
  CLUS_2          28           219
  CLUS_3          15           128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATM MUTATED        7     11     16     12     11
  ATM WILD-TYPE    114     93     75    109    106
D193V6, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1           7           114
  CLUS_2          11            93
  CLUS_3          16            75
  CLUS_4          12           109
  CLUS_5          11           106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  ATM MUTATED        9     30     20
  ATM WILD-TYPE    150    221    145
D193V7, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1           9           150
  CLUS_2          30           221
  CLUS_3          20           145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATM MUTATED        3     15     23     10      8
  ATM WILD-TYPE    115    116    128     84     73
D193V8, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1           3           115
  CLUS_2          15           116
  CLUS_3          23           128
  CLUS_4          10            84
  CLUS_5           8            73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATM MUTATED        8     15     13      4     10
  ATM WILD-TYPE    110    121    102     36     61
D193V9, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1           8           110
  CLUS_2          15           121
  CLUS_3          13           102
  CLUS_4           4            36
  CLUS_5          10            61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATM MUTATED        2     12     18      8     10
  ATM WILD-TYPE     46     97    112     93     82
D193V10, multiclass
        clus
vv       ATM MUTATED ATM WILD-TYPE
  CLUS_1           2            46
  CLUS_2          12            97
  CLUS_3          18           112
  CLUS_4           8            93
  CLUS_5          10            82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(194) Variable = LEMD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LEMD1 MUTATED        1      0      0      2
  LEMD1 WILD-TYPE    134     92    172    174
D194V1, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LEMD1 MUTATED        4      0      0
  LEMD1 WILD-TYPE    211    155    162
D194V2, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LEMD1 MUTATED        2      1      0      0
  LEMD1 WILD-TYPE    133    123    125     60
D194V3, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LEMD1 MUTATED        3      0      0
  LEMD1 WILD-TYPE    250    102     89
D194V4, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LEMD1 MUTATED        0      3      0
  LEMD1 WILD-TYPE    164    244    143
D194V5, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             3             244
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEMD1 MUTATED        0      1      2      0      0
  LEMD1 WILD-TYPE    121    103     89    121    117
D194V6, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LEMD1 MUTATED        0      4      0
  LEMD1 WILD-TYPE    159    247    165
D194V7, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             4             247
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEMD1 MUTATED        0      3      1      0      0
  LEMD1 WILD-TYPE    118    128    150     94     81
D194V8, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEMD1 MUTATED        0      1      0      1      2
  LEMD1 WILD-TYPE    118    135    115     39     69
D194V9, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEMD1 MUTATED        0      3      1      0      0
  LEMD1 WILD-TYPE     48    106    129    101     92
D194V10, multiclass
        clus
vv       LEMD1 MUTATED LEMD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(195) Variable = RASA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASA1 MUTATED        3      3      6     14
  RASA1 WILD-TYPE    132     89    166    162
D195V1, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             6             166
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RASA1 MUTATED       11      5      4
  RASA1 WILD-TYPE    204    150    158
D195V2, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             5             150
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASA1 MUTATED       10      7      1      5
  RASA1 WILD-TYPE    125    117    124     55
D195V3, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RASA1 MUTATED       16      5      2
  RASA1 WILD-TYPE    237     97     87
D195V4, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1            16             237
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RASA1 MUTATED        5     15      6
  RASA1 WILD-TYPE    159    232    137
D195V5, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            15             232
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASA1 MUTATED        5     10      6      3      2
  RASA1 WILD-TYPE    116     94     85    118    115
D195V6, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             5             116
  CLUS_2            10              94
  CLUS_3             6              85
  CLUS_4             3             118
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RASA1 MUTATED        4     18      4
  RASA1 WILD-TYPE    155    233    161
D195V7, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            18             233
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASA1 MUTATED        5      6     12      2      1
  RASA1 WILD-TYPE    113    125    139     92     80
D195V8, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             6             125
  CLUS_3            12             139
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASA1 MUTATED        3      5      4      1      7
  RASA1 WILD-TYPE    115    131    111     39     64
D195V9, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             131
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASA1 MUTATED        2      6      9      1      2
  RASA1 WILD-TYPE     46    103    121    100     90
D195V10, multiclass
        clus
vv       RASA1 MUTATED RASA1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             9             121
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(196) Variable = CABP5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CABP5 MUTATED        0      2      1      4
  CABP5 WILD-TYPE    135     90    171    172
D196V1, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CABP5 MUTATED        6      0      1
  CABP5 WILD-TYPE    209    155    161
D196V2, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CABP5 MUTATED        4      2      0      0
  CABP5 WILD-TYPE    131    122    125     60
D196V3, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CABP5 MUTATED        6      0      0
  CABP5 WILD-TYPE    247    102     89
D196V4, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CABP5 MUTATED        1      5      2
  CABP5 WILD-TYPE    163    242    141
D196V5, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CABP5 MUTATED        0      3      3      1      1
  CABP5 WILD-TYPE    121    101     88    120    116
D196V6, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CABP5 MUTATED        0      6      2
  CABP5 WILD-TYPE    159    245    163
D196V7, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CABP5 MUTATED        1      3      2      1      1
  CABP5 WILD-TYPE    117    128    149     93     80
D196V8, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CABP5 MUTATED        0      4      2      0      1
  CABP5 WILD-TYPE    118    132    113     40     70
D196V9, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CABP5 MUTATED        0      3      2      1      1
  CABP5 WILD-TYPE     48    106    128    100     91
D196V10, multiclass
        clus
vv       CABP5 MUTATED CABP5 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(197) Variable = PALB2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PALB2 MUTATED        1      2      1      8
  PALB2 WILD-TYPE    134     90    171    168
D197V1, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PALB2 MUTATED        6      0      5
  PALB2 WILD-TYPE    209    155    157
D197V2, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PALB2 MUTATED        2      7      0      2
  PALB2 WILD-TYPE    133    117    125     58
D197V3, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             7             117
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PALB2 MUTATED        8      3      0
  PALB2 WILD-TYPE    245     99     89
D197V4, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PALB2 MUTATED        1      6      5
  PALB2 WILD-TYPE    163    241    138
D197V5, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PALB2 MUTATED        2      0      6      0      4
  PALB2 WILD-TYPE    119    104     85    121    113
D197V6, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PALB2 MUTATED        1      6      5
  PALB2 WILD-TYPE    158    245    160
D197V7, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PALB2 MUTATED        1      4      5      0      2
  PALB2 WILD-TYPE    117    127    146     94     79
D197V8, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PALB2 MUTATED        0      4      3      0      4
  PALB2 WILD-TYPE    118    132    112     40     67
D197V9, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PALB2 MUTATED        0      3      6      2      0
  PALB2 WILD-TYPE     48    106    124     99     92
D197V10, multiclass
        clus
vv       PALB2 MUTATED PALB2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(198) Variable = RB1CC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1CC1 MUTATED        0      1      3     12
  RB1CC1 WILD-TYPE    135     91    169    164
D198V1, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RB1CC1 MUTATED       14      0      1
  RB1CC1 WILD-TYPE    201    155    161
D198V2, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1CC1 MUTATED        6      6      1      0
  RB1CC1 WILD-TYPE    129    118    124     60
D198V3, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RB1CC1 MUTATED        8      3      2
  RB1CC1 WILD-TYPE    245     99     87
D198V4, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RB1CC1 MUTATED        1     14      2
  RB1CC1 WILD-TYPE    163    233    141
D198V5, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2             14              233
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1CC1 MUTATED        0      4     10      0      3
  RB1CC1 WILD-TYPE    121    100     81    121    114
D198V6, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              4              100
  CLUS_3             10               81
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RB1CC1 MUTATED        2     13      2
  RB1CC1 WILD-TYPE    157    238    163
D198V7, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             13              238
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1CC1 MUTATED        3      9      5      0      0
  RB1CC1 WILD-TYPE    115    122    146     94     81
D198V8, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              9              122
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1CC1 MUTATED        0      9      1      0      2
  RB1CC1 WILD-TYPE    118    127    114     40     69
D198V9, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              9              127
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1CC1 MUTATED        0      6      6      0      0
  RB1CC1 WILD-TYPE     48    103    124    101     92
D198V10, multiclass
        clus
vv       RB1CC1 MUTATED RB1CC1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              6              124
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(199) Variable = C16ORF63 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF63 MUTATED        2      0      1      7
  C16ORF63 WILD-TYPE    133     92    171    169
D199V1, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF63 MUTATED        7      1      1
  C16ORF63 WILD-TYPE    208    154    161
D199V2, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                7                208
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF63 MUTATED        1      5      4      0
  C16ORF63 WILD-TYPE    134    119    121     60
D199V3, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                5                119
  CLUS_3                4                121
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF63 MUTATED        4      4      2
  C16ORF63 WILD-TYPE    249     98     87
D199V4, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                4                 98
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF63 MUTATED        2      6      2
  C16ORF63 WILD-TYPE    162    241    141
D199V5, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                6                241
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF63 MUTATED        1      1      5      1      2
  C16ORF63 WILD-TYPE    120    103     86    120    115
D199V6, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                5                 86
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF63 MUTATED        3      4      3
  C16ORF63 WILD-TYPE    156    247    162
D199V7, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                4                247
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF63 MUTATED        0      4      2      1      3
  C16ORF63 WILD-TYPE    118    127    149     93     78
D199V8, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                127
  CLUS_3                2                149
  CLUS_4                1                 93
  CLUS_5                3                 78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF63 MUTATED        0      1      2      1      3
  C16ORF63 WILD-TYPE    118    135    113     39     68
D199V9, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                135
  CLUS_3                2                113
  CLUS_4                1                 39
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF63 MUTATED        0      2      4      0      1
  C16ORF63 WILD-TYPE     48    107    126    101     91
D199V10, multiclass
        clus
vv       C16ORF63 MUTATED C16ORF63 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                4                126
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(200) Variable = ZNF878 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF878 MUTATED        2      0      3     11
  ZNF878 WILD-TYPE    133     92    169    165
D200V1, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              3              169
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF878 MUTATED       11      2      2
  ZNF878 WILD-TYPE    204    153    160
D200V2, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1             11              204
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF878 MUTATED        7      4      0      1
  ZNF878 WILD-TYPE    128    120    125     59
D200V3, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF878 MUTATED        9      3      0
  ZNF878 WILD-TYPE    244     99     89
D200V4, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF878 MUTATED        5      8      1
  ZNF878 WILD-TYPE    159    239    142
D200V5, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              8              239
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF878 MUTATED        0      1      9      3      1
  ZNF878 WILD-TYPE    121    103     82    118    116
D200V6, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              9               82
  CLUS_4              3              118
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF878 MUTATED        3     11      2
  ZNF878 WILD-TYPE    156    240    163
D200V7, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             11              240
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF878 MUTATED        0      9      4      2      1
  ZNF878 WILD-TYPE    118    122    147     92     80
D200V8, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              9              122
  CLUS_3              4              147
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF878 MUTATED        3      3      0      2      5
  ZNF878 WILD-TYPE    115    133    115     38     66
D200V9, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF878 MUTATED        2      4      4      1      2
  ZNF878 WILD-TYPE     46    105    126    100     90
D200V10, multiclass
        clus
vv       ZNF878 MUTATED ZNF878 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(201) Variable = PIK3CA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED       11      4     17     52
  PIK3CA WILD-TYPE    124     88    155    124
D201V1, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             11              124
  CLUS_2              4               88
  CLUS_3             17              155
  CLUS_4             52              124
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       39     13     26
  PIK3CA WILD-TYPE    176    142    136
D201V2, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             39              176
  CLUS_2             13              142
  CLUS_3             26              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3CA MUTATED       34     22      9      7
  PIK3CA WILD-TYPE    101    102    116     53
D201V3, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             34              101
  CLUS_2             22              102
  CLUS_3              9              116
  CLUS_4              7               53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       50     17      5
  PIK3CA WILD-TYPE    203     85     84
D201V4, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             50              203
  CLUS_2             17               85
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       18     37     25
  PIK3CA WILD-TYPE    146    210    118
D201V5, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             18              146
  CLUS_2             37              210
  CLUS_3             25              118
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3CA MUTATED        6     11     19     13     31
  PIK3CA WILD-TYPE    115     93     72    108     86
D201V6, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              6              115
  CLUS_2             11               93
  CLUS_3             19               72
  CLUS_4             13              108
  CLUS_5             31               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3CA MUTATED       20     44     20
  PIK3CA WILD-TYPE    139    207    145
D201V7, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             20              139
  CLUS_2             44              207
  CLUS_3             20              145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3CA MUTATED        4     20     34     13     13
  PIK3CA WILD-TYPE    114    111    117     81     68
D201V8, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              4              114
  CLUS_2             20              111
  CLUS_3             34              117
  CLUS_4             13               81
  CLUS_5             13               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3CA MUTATED       14     16     11      1     23
  PIK3CA WILD-TYPE    104    120    104     39     48
D201V9, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1             14              104
  CLUS_2             16              120
  CLUS_3             11              104
  CLUS_4              1               39
  CLUS_5             23               48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3CA MUTATED        2     12     31      8     12
  PIK3CA WILD-TYPE     46     97     99     93     80
D201V10, multiclass
        clus
vv       PIK3CA MUTATED PIK3CA WILD-TYPE
  CLUS_1              2               46
  CLUS_2             12               97
  CLUS_3             31               99
  CLUS_4              8               93
  CLUS_5             12               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(202) Variable = SH3KBP1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        1      3      3     12
  SH3KBP1 WILD-TYPE    134     89    169    164
D202V1, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3                89
  CLUS_3               3               169
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        8      4      3
  SH3KBP1 WILD-TYPE    207    151    159
D202V2, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               4               151
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3KBP1 MUTATED        8      4      1      3
  SH3KBP1 WILD-TYPE    127    120    124     57
D202V3, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               8               127
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED       12      2      2
  SH3KBP1 WILD-TYPE    241    100     87
D202V4, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               2               100
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        4      8      5
  SH3KBP1 WILD-TYPE    160    239    138
D202V5, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               8               239
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3KBP1 MUTATED        2      1      7      3      4
  SH3KBP1 WILD-TYPE    119    103     84    118    113
D202V6, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               1               103
  CLUS_3               7                84
  CLUS_4               3               118
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SH3KBP1 MUTATED        3     12      4
  SH3KBP1 WILD-TYPE    156    239    161
D202V7, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              12               239
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3KBP1 MUTATED        1      6      8      2      2
  SH3KBP1 WILD-TYPE    117    125    143     92     79
D202V8, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               8               143
  CLUS_4               2                92
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3KBP1 MUTATED        2      7      2      1      1
  SH3KBP1 WILD-TYPE    116    129    113     39     70
D202V9, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               7               129
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3KBP1 MUTATED        1      5      4      1      2
  SH3KBP1 WILD-TYPE     47    104    126    100     90
D202V10, multiclass
        clus
vv       SH3KBP1 MUTATED SH3KBP1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               4               126
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(203) Variable = C2ORF76 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2ORF76 MUTATED        0      0      3      2
  C2ORF76 WILD-TYPE    135     92    169    174
D203V1, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF76 MUTATED        3      1      0
  C2ORF76 WILD-TYPE    212    154    162
D203V2, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2ORF76 MUTATED        1      1      2      0
  C2ORF76 WILD-TYPE    134    123    123     60
D203V3, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1               123
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF76 MUTATED        1      1      2
  C2ORF76 WILD-TYPE    252    101     87
D203V4, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               1               252
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF76 MUTATED        1      2      2
  C2ORF76 WILD-TYPE    163    245    141
D203V5, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF76 MUTATED        0      2      1      1      1
  C2ORF76 WILD-TYPE    121    102     90    120    116
D203V6, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               1                90
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF76 MUTATED        1      1      3
  C2ORF76 WILD-TYPE    158    250    162
D203V7, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               1               250
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF76 MUTATED        1      1      1      1      1
  C2ORF76 WILD-TYPE    117    130    150     93     80
D203V8, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF76 MUTATED        1      1      2      0      0
  C2ORF76 WILD-TYPE    117    135    113     40     71
D203V9, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF76 MUTATED        0      0      2      1      1
  C2ORF76 WILD-TYPE     48    109    128    100     91
D203V10, multiclass
        clus
vv       C2ORF76 MUTATED C2ORF76 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(204) Variable = CCDC150 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC150 MUTATED        0      0      3     11
  CCDC150 WILD-TYPE    135     92    169    165
D204V1, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC150 MUTATED        9      2      1
  CCDC150 WILD-TYPE    206    153    161
D204V2, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               9               206
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC150 MUTATED        7      3      0      1
  CCDC150 WILD-TYPE    128    121    125     59
D204V3, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               7               128
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC150 MUTATED       10      1      0
  CCDC150 WILD-TYPE    243    101     89
D204V4, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1              10               243
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC150 MUTATED        5      7      1
  CCDC150 WILD-TYPE    159    240    142
D204V5, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               5               159
  CLUS_2               7               240
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC150 MUTATED        0      2      7      3      1
  CCDC150 WILD-TYPE    121    102     84    118    116
D204V6, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               7                84
  CLUS_4               3               118
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC150 MUTATED        3      9      2
  CCDC150 WILD-TYPE    156    242    163
D204V7, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               9               242
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC150 MUTATED        0      8      3      3      0
  CCDC150 WILD-TYPE    118    123    148     91     81
D204V8, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               8               123
  CLUS_3               3               148
  CLUS_4               3                91
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC150 MUTATED        2      4      1      0      4
  CCDC150 WILD-TYPE    116    132    114     40     67
D204V9, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               132
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC150 MUTATED        0      6      2      0      3
  CCDC150 WILD-TYPE     48    103    128    101     89
D204V10, multiclass
        clus
vv       CCDC150 MUTATED CCDC150 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               6               103
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(205) Variable = ANKRD20A4 MUTATION ANALYSIS
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD20A4 MUTATED        2      1      2      5
  ANKRD20A4 WILD-TYPE    133     91    170    171
D205V1, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 2                 133
  CLUS_2                 1                  91
  CLUS_3                 2                 170
  CLUS_4                 5                 171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  ANKRD20A4 MUTATED        8      2      0
  ANKRD20A4 WILD-TYPE    207    153    162
D205V2, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 8                 207
  CLUS_2                 2                 153
  CLUS_3                 0                 162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD20A4 MUTATED        3      5      1      0
  ANKRD20A4 WILD-TYPE    132    119    124     60
D205V3, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 3                 132
  CLUS_2                 5                 119
  CLUS_3                 1                 124
  CLUS_4                 0                  60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  ANKRD20A4 MUTATED        5      3      1
  ANKRD20A4 WILD-TYPE    248     99     88
D205V4, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 5                 248
  CLUS_2                 3                  99
  CLUS_3                 1                  88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  ANKRD20A4 MUTATED        2      7      1
  ANKRD20A4 WILD-TYPE    162    240    142
D205V5, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 2                 162
  CLUS_2                 7                 240
  CLUS_3                 1                 142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD20A4 MUTATED        0      0      7      2      1
  ANKRD20A4 WILD-TYPE    121    104     84    119    116
D205V6, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 0                 121
  CLUS_2                 0                 104
  CLUS_3                 7                  84
  CLUS_4                 2                 119
  CLUS_5                 1                 116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  ANKRD20A4 MUTATED        1      8      1
  ANKRD20A4 WILD-TYPE    158    243    164
D205V7, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 1                 158
  CLUS_2                 8                 243
  CLUS_3                 1                 164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD20A4 MUTATED        0      6      2      1      1
  ANKRD20A4 WILD-TYPE    118    125    149     93     80
D205V8, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 0                 118
  CLUS_2                 6                 125
  CLUS_3                 2                 149
  CLUS_4                 1                  93
  CLUS_5                 1                  80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD20A4 MUTATED        1      6      1      0      1
  ANKRD20A4 WILD-TYPE    117    130    114     40     70
D205V9, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 1                 117
  CLUS_2                 6                 130
  CLUS_3                 1                 114
  CLUS_4                 0                  40
  CLUS_5                 1                  70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD20A4 MUTATED        0      4      3      1      1
  ANKRD20A4 WILD-TYPE     48    105    127    100     91
D205V10, multiclass
        clus
vv       ANKRD20A4 MUTATED ANKRD20A4 WILD-TYPE
  CLUS_1                 0                  48
  CLUS_2                 4                 105
  CLUS_3                 3                 127
  CLUS_4                 1                 100
  CLUS_5                 1                  91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(206) Variable = RABGAP1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RABGAP1 MUTATED        2      1      1     20
  RABGAP1 WILD-TYPE    133     91    171    156
D206V1, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4              20               156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RABGAP1 MUTATED       20      0      2
  RABGAP1 WILD-TYPE    195    155    160
D206V2, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1              20               195
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RABGAP1 MUTATED        8     10      0      1
  RABGAP1 WILD-TYPE    127    114    125     59
D206V3, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               8               127
  CLUS_2              10               114
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RABGAP1 MUTATED       14      5      0
  RABGAP1 WILD-TYPE    239     97     89
D206V4, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1              14               239
  CLUS_2               5                97
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RABGAP1 MUTATED        3     16      3
  RABGAP1 WILD-TYPE    161    231    140
D206V5, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               3               161
  CLUS_2              16               231
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RABGAP1 MUTATED        2      2     17      0      1
  RABGAP1 WILD-TYPE    119    102     74    121    116
D206V6, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3              17                74
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RABGAP1 MUTATED        1     22      2
  RABGAP1 WILD-TYPE    158    229    163
D206V7, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2              22               229
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RABGAP1 MUTATED        1     16      6      0      2
  RABGAP1 WILD-TYPE    117    115    145     94     79
D206V8, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2              16               115
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RABGAP1 MUTATED        0     11      1      2      6
  RABGAP1 WILD-TYPE    118    125    114     38     65
D206V9, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2              11               125
  CLUS_3               1               114
  CLUS_4               2                38
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RABGAP1 MUTATED        2     10      6      2      0
  RABGAP1 WILD-TYPE     46     99    124     99     92
D206V10, multiclass
        clus
vv       RABGAP1 MUTATED RABGAP1 WILD-TYPE
  CLUS_1               2                46
  CLUS_2              10                99
  CLUS_3               6               124
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(207) Variable = PPARG MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPARG MUTATED        1      0      0      5
  PPARG WILD-TYPE    134     92    172    171
D207V1, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPARG MUTATED        3      0      1
  PPARG WILD-TYPE    212    155    161
D207V2, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPARG MUTATED        2      2      1      0
  PPARG WILD-TYPE    133    122    124     60
D207V3, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPARG MUTATED        3      1      1
  PPARG WILD-TYPE    250    101     88
D207V4, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             3             250
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPARG MUTATED        1      3      2
  PPARG WILD-TYPE    163    244    141
D207V5, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARG MUTATED        1      2      2      1      0
  PPARG WILD-TYPE    120    102     89    120    117
D207V6, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPARG MUTATED        0      5      1
  PPARG WILD-TYPE    159    246    164
D207V7, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARG MUTATED        0      3      3      0      0
  PPARG WILD-TYPE    118    128    148     94     81
D207V8, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARG MUTATED        0      2      1      0      1
  PPARG WILD-TYPE    118    134    114     40     70
D207V9, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARG MUTATED        0      2      2      0      0
  PPARG WILD-TYPE     48    107    128    101     92
D207V10, multiclass
        clus
vv       PPARG MUTATED PPARG WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(208) Variable = TOP2A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TOP2A MUTATED        3      6      4      7
  TOP2A WILD-TYPE    132     86    168    169
D208V1, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6              86
  CLUS_3             4             168
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TOP2A MUTATED        9      3      3
  TOP2A WILD-TYPE    206    152    159
D208V2, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             9             206
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TOP2A MUTATED        3      7      2      4
  TOP2A WILD-TYPE    132    117    123     56
D208V3, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             7             117
  CLUS_3             2             123
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TOP2A MUTATED        8      6      2
  TOP2A WILD-TYPE    245     96     87
D208V4, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             8             245
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TOP2A MUTATED        5     10      3
  TOP2A WILD-TYPE    159    237    140
D208V5, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             5             159
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOP2A MUTATED        1      6      3      5      3
  TOP2A WILD-TYPE    120     98     88    116    114
D208V6, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             1             120
  CLUS_2             6              98
  CLUS_3             3              88
  CLUS_4             5             116
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TOP2A MUTATED        4     12      4
  TOP2A WILD-TYPE    155    239    161
D208V7, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOP2A MUTATED        5      4      8      2      1
  TOP2A WILD-TYPE    113    127    143     92     80
D208V8, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             5             113
  CLUS_2             4             127
  CLUS_3             8             143
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOP2A MUTATED        2      6      1      1      4
  TOP2A WILD-TYPE    116    130    114     39     67
D208V9, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOP2A MUTATED        1      6      4      1      2
  TOP2A WILD-TYPE     47    103    126    100     90
D208V10, multiclass
        clus
vv       TOP2A MUTATED TOP2A WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(209) Variable = U2AF2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  U2AF2 MUTATED        1      2      1     10
  U2AF2 WILD-TYPE    134     90    171    166
D209V1, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  U2AF2 MUTATED       10      1      2
  U2AF2 WILD-TYPE    205    154    160
D209V2, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  U2AF2 MUTATED        8      2      0      1
  U2AF2 WILD-TYPE    127    122    125     59
D209V3, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  U2AF2 MUTATED        9      1      1
  U2AF2 WILD-TYPE    244    101     88
D209V4, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  U2AF2 MUTATED        1     10      4
  U2AF2 WILD-TYPE    163    237    139
D209V5, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            10             237
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  U2AF2 MUTATED        2      2      6      1      4
  U2AF2 WILD-TYPE    119    102     85    120    113
D209V6, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  U2AF2 MUTATED        3      9      3
  U2AF2 WILD-TYPE    156    242    162
D209V7, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  U2AF2 MUTATED        3      6      3      1      2
  U2AF2 WILD-TYPE    115    125    148     93     79
D209V8, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             125
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  U2AF2 MUTATED        1      8      2      1      1
  U2AF2 WILD-TYPE    117    128    113     39     70
D209V9, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  U2AF2 MUTATED        0      8      2      2      1
  U2AF2 WILD-TYPE     48    101    128     99     91
D209V10, multiclass
        clus
vv       U2AF2 MUTATED U2AF2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             2             128
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(210) Variable = CCDC153 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC153 MUTATED        0      0      1      6
  CCDC153 WILD-TYPE    135     92    171    170
D210V1, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC153 MUTATED        5      0      2
  CCDC153 WILD-TYPE    210    155    160
D210V2, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC153 MUTATED        1      3      1      1
  CCDC153 WILD-TYPE    134    121    124     59
D210V3, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC153 MUTATED        3      2      1
  CCDC153 WILD-TYPE    250    100     88
D210V4, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC153 MUTATED        0      3      3
  CCDC153 WILD-TYPE    164    244    140
D210V5, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               3               244
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC153 MUTATED        0      0      3      0      3
  CCDC153 WILD-TYPE    121    104     88    121    114
D210V6, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC153 MUTATED        0      4      3
  CCDC153 WILD-TYPE    159    247    162
D210V7, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               4               247
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC153 MUTATED        1      3      1      0      2
  CCDC153 WILD-TYPE    117    128    150     94     79
D210V8, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               128
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC153 MUTATED        0      1      2      0      4
  CCDC153 WILD-TYPE    118    135    113     40     67
D210V9, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC153 MUTATED        0      4      2      1      0
  CCDC153 WILD-TYPE     48    105    128    100     92
D210V10, multiclass
        clus
vv       CCDC153 MUTATED CCDC153 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(211) Variable = C5ORF42 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C5ORF42 MUTATED        4      3      8     23
  C5ORF42 WILD-TYPE    131     89    164    153
D211V1, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3                89
  CLUS_3               8               164
  CLUS_4              23               153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C5ORF42 MUTATED       26      7      2
  C5ORF42 WILD-TYPE    189    148    160
D211V2, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1              26               189
  CLUS_2               7               148
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C5ORF42 MUTATED       12     13      3      1
  C5ORF42 WILD-TYPE    123    111    122     59
D211V3, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1              12               123
  CLUS_2              13               111
  CLUS_3               3               122
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C5ORF42 MUTATED       19      8      2
  C5ORF42 WILD-TYPE    234     94     87
D211V4, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1              19               234
  CLUS_2               8                94
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C5ORF42 MUTATED       12     23      3
  C5ORF42 WILD-TYPE    152    224    140
D211V5, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1              12               152
  CLUS_2              23               224
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C5ORF42 MUTATED        5      7     16      7      3
  C5ORF42 WILD-TYPE    116     97     75    114    114
D211V6, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1               5               116
  CLUS_2               7                97
  CLUS_3              16                75
  CLUS_4               7               114
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C5ORF42 MUTATED       10     24      5
  C5ORF42 WILD-TYPE    149    227    160
D211V7, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1              10               149
  CLUS_2              24               227
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C5ORF42 MUTATED        5     15     12      5      2
  C5ORF42 WILD-TYPE    113    116    139     89     79
D211V8, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1               5               113
  CLUS_2              15               116
  CLUS_3              12               139
  CLUS_4               5                89
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C5ORF42 MUTATED        7     10      2      4      7
  C5ORF42 WILD-TYPE    111    126    113     36     64
D211V9, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1               7               111
  CLUS_2              10               126
  CLUS_3               2               113
  CLUS_4               4                36
  CLUS_5               7                64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C5ORF42 MUTATED        2      9     10      4      5
  C5ORF42 WILD-TYPE     46    100    120     97     87
D211V10, multiclass
        clus
vv       C5ORF42 MUTATED C5ORF42 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               9               100
  CLUS_3              10               120
  CLUS_4               4                97
  CLUS_5               5                87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(212) Variable = JAK1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  JAK1 MUTATED        1      2      4     12
  JAK1 WILD-TYPE    134     90    168    164
D212V1, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            4            168
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  JAK1 MUTATED       10      3      3
  JAK1 WILD-TYPE    205    152    159
D212V2, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  JAK1 MUTATED        6      7      2      1
  JAK1 WILD-TYPE    129    117    123     59
D212V3, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  JAK1 MUTATED       11      4      1
  JAK1 WILD-TYPE    242     98     88
D212V4, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  JAK1 MUTATED        4     12      3
  JAK1 WILD-TYPE    160    235    140
D212V5, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           12            235
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JAK1 MUTATED        3      5      6      2      3
  JAK1 WILD-TYPE    118     99     85    119    114
D212V6, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            5             99
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  JAK1 MUTATED        6     11      3
  JAK1 WILD-TYPE    153    240    162
D212V7, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            6            153
  CLUS_2           11            240
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JAK1 MUTATED        2     10      5      2      1
  JAK1 WILD-TYPE    116    121    146     92     80
D212V8, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           10            121
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JAK1 MUTATED        3      7      0      2      2
  JAK1 WILD-TYPE    115    129    115     38     69
D212V9, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            7            129
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JAK1 MUTATED        1      5      4      2      2
  JAK1 WILD-TYPE     47    104    126     99     90
D212V10, multiclass
        clus
vv       JAK1 MUTATED JAK1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            4            126
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(213) Variable = COIL MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COIL MUTATED        1      1      1      8
  COIL WILD-TYPE    134     91    171    168
D213V1, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  COIL MUTATED        8      1      1
  COIL WILD-TYPE    207    154    161
D213V2, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            8            207
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COIL MUTATED        5      4      0      0
  COIL WILD-TYPE    130    120    125     60
D213V3, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            5            130
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  COIL MUTATED        6      1      2
  COIL WILD-TYPE    247    101     87
D213V4, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            6            247
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  COIL MUTATED        1      6      4
  COIL WILD-TYPE    163    241    139
D213V5, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            1            163
  CLUS_2            6            241
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COIL MUTATED        0      3      5      0      3
  COIL WILD-TYPE    121    101     86    121    114
D213V6, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  COIL MUTATED        1      9      1
  COIL WILD-TYPE    158    242    164
D213V7, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            1            158
  CLUS_2            9            242
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COIL MUTATED        1      5      5      0      0
  COIL WILD-TYPE    117    126    146     94     81
D213V8, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COIL MUTATED        0      4      1      1      3
  COIL WILD-TYPE    118    132    114     39     68
D213V9, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COIL MUTATED        1      2      6      0      0
  COIL WILD-TYPE     47    107    124    101     92
D213V10, multiclass
        clus
vv       COIL MUTATED COIL WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            6            124
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(214) Variable = TCF20 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF20 MUTATED        2      2      2     15
  TCF20 WILD-TYPE    133     90    170    161
D214V1, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF20 MUTATED        9      4      5
  TCF20 WILD-TYPE    206    151    157
D214V2, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             4             151
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCF20 MUTATED        5      7      4      3
  TCF20 WILD-TYPE    130    117    121     57
D214V3, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             7             117
  CLUS_3             4             121
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF20 MUTATED       11      4      4
  TCF20 WILD-TYPE    242     98     85
D214V4, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF20 MUTATED        7      7      6
  TCF20 WILD-TYPE    157    240    137
D214V5, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             7             157
  CLUS_2             7             240
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCF20 MUTATED        3      1      5      5      6
  TCF20 WILD-TYPE    118    103     86    116    111
D214V6, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             5             116
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TCF20 MUTATED        4     10      8
  TCF20 WILD-TYPE    155    241    157
D214V7, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            10             241
  CLUS_3             8             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCF20 MUTATED        2      4     11      3      2
  TCF20 WILD-TYPE    116    127    140     91     79
D214V8, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3            11             140
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCF20 MUTATED        3      4      5      1      4
  TCF20 WILD-TYPE    115    132    110     39     67
D214V9, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             5             110
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCF20 MUTATED        1      4      6      3      3
  TCF20 WILD-TYPE     47    105    124     98     89
D214V10, multiclass
        clus
vv       TCF20 MUTATED TCF20 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             6             124
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(215) Variable = TBX4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBX4 MUTATED        0      1      2     12
  TBX4 WILD-TYPE    135     91    170    164
D215V1, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TBX4 MUTATED        8      1      2
  TBX4 WILD-TYPE    207    154    160
D215V2, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBX4 MUTATED        3      6      1      1
  TBX4 WILD-TYPE    132    118    124     59
D215V3, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            6            118
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TBX4 MUTATED        7      3      1
  TBX4 WILD-TYPE    246     99     88
D215V4, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TBX4 MUTATED        1      8      4
  TBX4 WILD-TYPE    163    239    139
D215V5, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBX4 MUTATED        0      2      7      1      3
  TBX4 WILD-TYPE    121    102     84    120    114
D215V6, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            7             84
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TBX4 MUTATED        1     10      4
  TBX4 WILD-TYPE    158    241    161
D215V7, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           10            241
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBX4 MUTATED        0      6      7      1      1
  TBX4 WILD-TYPE    118    125    144     93     80
D215V8, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBX4 MUTATED        0      3      1      1      4
  TBX4 WILD-TYPE    118    133    114     39     67
D215V9, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBX4 MUTATED        0      3      4      1      1
  TBX4 WILD-TYPE     48    106    126    100     91
D215V10, multiclass
        clus
vv       TBX4 MUTATED TBX4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(216) Variable = PRKAB1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKAB1 MUTATED        4      2      0      6
  PRKAB1 WILD-TYPE    131     90    172    170
D216V1, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRKAB1 MUTATED        6      3      2
  PRKAB1 WILD-TYPE    209    152    160
D216V2, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKAB1 MUTATED        2      4      3      1
  PRKAB1 WILD-TYPE    133    120    122     59
D216V3, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4              120
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRKAB1 MUTATED        4      3      3
  PRKAB1 WILD-TYPE    249     99     86
D216V4, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              3               99
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRKAB1 MUTATED        1      6      4
  PRKAB1 WILD-TYPE    163    241    139
D216V5, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKAB1 MUTATED        4      1      2      1      3
  PRKAB1 WILD-TYPE    117    103     89    120    114
D216V6, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRKAB1 MUTATED        2      5      5
  PRKAB1 WILD-TYPE    157    246    160
D216V7, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKAB1 MUTATED        4      2      5      0      1
  PRKAB1 WILD-TYPE    114    129    146     94     80
D216V8, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              2              129
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKAB1 MUTATED        2      4      4      0      1
  PRKAB1 WILD-TYPE    116    132    111     40     70
D216V9, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              132
  CLUS_3              4              111
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKAB1 MUTATED        3      1      5      2      0
  PRKAB1 WILD-TYPE     45    108    125     99     92
D216V10, multiclass
        clus
vv       PRKAB1 MUTATED PRKAB1 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              1              108
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(217) Variable = CETN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CETN3 MUTATED        0      0      0     11
  CETN3 WILD-TYPE    135     92    172    165
D217V1, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CETN3 MUTATED        7      0      2
  CETN3 WILD-TYPE    208    155    160
D217V2, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CETN3 MUTATED        2      4      1      1
  CETN3 WILD-TYPE    133    120    124     59
D217V3, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CETN3 MUTATED        7      0      1
  CETN3 WILD-TYPE    246    102     88
D217V4, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CETN3 MUTATED        1      7      2
  CETN3 WILD-TYPE    163    240    141
D217V5, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CETN3 MUTATED        0      2      6      0      2
  CETN3 WILD-TYPE    121    102     85    121    115
D217V6, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CETN3 MUTATED        0      7      4
  CETN3 WILD-TYPE    159    244    161
D217V7, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CETN3 MUTATED        1      7      2      0      1
  CETN3 WILD-TYPE    117    124    149     94     80
D217V8, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CETN3 MUTATED        0      5      1      1      2
  CETN3 WILD-TYPE    118    131    114     39     69
D217V9, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CETN3 MUTATED        1      5      1      2      0
  CETN3 WILD-TYPE     47    104    129     99     92
D217V10, multiclass
        clus
vv       CETN3 MUTATED CETN3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             1             129
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(218) Variable = DDX26B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX26B MUTATED        1      3      1      8
  DDX26B WILD-TYPE    134     89    171    168
D218V1, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3               89
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DDX26B MUTATED        7      1      4
  DDX26B WILD-TYPE    208    154    158
D218V2, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              7              208
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX26B MUTATED        1      6      0      1
  DDX26B WILD-TYPE    134    118    125     59
D218V3, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              1              134
  CLUS_2              6              118
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DDX26B MUTATED        5      2      1
  DDX26B WILD-TYPE    248    100     88
D218V4, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              5              248
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DDX26B MUTATED        2      7      3
  DDX26B WILD-TYPE    162    240    140
D218V5, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX26B MUTATED        3      2      5      0      2
  DDX26B WILD-TYPE    118    102     86    121    115
D218V6, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              3              118
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DDX26B MUTATED        1      9      3
  DDX26B WILD-TYPE    158    242    162
D218V7, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX26B MUTATED        2      7      3      0      1
  DDX26B WILD-TYPE    116    124    148     94     80
D218V8, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              124
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX26B MUTATED        1      6      1      0      3
  DDX26B WILD-TYPE    117    130    114     40     68
D218V9, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX26B MUTATED        0      6      3      2      0
  DDX26B WILD-TYPE     48    103    127     99     92
D218V10, multiclass
        clus
vv       DDX26B MUTATED DDX26B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(219) Variable = DLAT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLAT MUTATED        1      0      0      8
  DLAT WILD-TYPE    134     92    172    168
D219V1, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLAT MUTATED        7      0      0
  DLAT WILD-TYPE    208    155    162
D219V2, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLAT MUTATED        3      3      1      0
  DLAT WILD-TYPE    132    121    124     60
D219V3, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLAT MUTATED        4      2      1
  DLAT WILD-TYPE    249    100     88
D219V4, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLAT MUTATED        1      4      3
  DLAT WILD-TYPE    163    243    140
D219V5, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            1            163
  CLUS_2            4            243
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLAT MUTATED        0      2      3      1      2
  DLAT WILD-TYPE    121    102     88    120    115
D219V6, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DLAT MUTATED        0      7      2
  DLAT WILD-TYPE    159    244    163
D219V7, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            0            159
  CLUS_2            7            244
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLAT MUTATED        1      4      4      0      0
  DLAT WILD-TYPE    117    127    147     94     81
D219V8, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            4            147
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLAT MUTATED        0      0      2      0      3
  DLAT WILD-TYPE    118    136    113     40     68
D219V9, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            0            118
  CLUS_2            0            136
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLAT MUTATED        0      2      2      1      0
  DLAT WILD-TYPE     48    107    128    100     92
D219V10, multiclass
        clus
vv       DLAT MUTATED DLAT WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(220) Variable = MPRIP MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MPRIP MUTATED        1      1      0     16
  MPRIP WILD-TYPE    134     91    172    160
D220V1, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MPRIP MUTATED       11      0      2
  MPRIP WILD-TYPE    204    155    160
D220V2, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1            11             204
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MPRIP MUTATED        9      8      0      0
  MPRIP WILD-TYPE    126    116    125     60
D220V3, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             9             126
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MPRIP MUTATED       15      2      0
  MPRIP WILD-TYPE    238    100     89
D220V4, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1            15             238
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MPRIP MUTATED        1     11      4
  MPRIP WILD-TYPE    163    236    139
D220V5, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             1             163
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPRIP MUTATED        1      2     12      0      1
  MPRIP WILD-TYPE    120    102     79    121    116
D220V6, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3            12              79
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MPRIP MUTATED        1     15      2
  MPRIP WILD-TYPE    158    236    163
D220V7, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             1             158
  CLUS_2            15             236
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPRIP MUTATED        1     11      6      0      0
  MPRIP WILD-TYPE    117    120    145     94     81
D220V8, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             1             117
  CLUS_2            11             120
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPRIP MUTATED        0      6      2      1      3
  MPRIP WILD-TYPE    118    130    113     39     68
D220V9, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPRIP MUTATED        0      8      3      1      0
  MPRIP WILD-TYPE     48    101    127    100     92
D220V10, multiclass
        clus
vv       MPRIP MUTATED MPRIP WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(221) Variable = NCAPD3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPD3 MUTATED        2      5      5     17
  NCAPD3 WILD-TYPE    133     87    167    159
D221V1, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5               87
  CLUS_3              5              167
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPD3 MUTATED       16      6      5
  NCAPD3 WILD-TYPE    199    149    157
D221V2, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1             16              199
  CLUS_2              6              149
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPD3 MUTATED        8     11      4      2
  NCAPD3 WILD-TYPE    127    113    121     58
D221V3, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              8              127
  CLUS_2             11              113
  CLUS_3              4              121
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPD3 MUTATED       16      8      1
  NCAPD3 WILD-TYPE    237     94     88
D221V4, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1             16              237
  CLUS_2              8               94
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPD3 MUTATED        5     22      3
  NCAPD3 WILD-TYPE    159    225    140
D221V5, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              5              159
  CLUS_2             22              225
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPD3 MUTATED        5     10      9      3      3
  NCAPD3 WILD-TYPE    116     94     82    118    114
D221V6, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              5              116
  CLUS_2             10               94
  CLUS_3              9               82
  CLUS_4              3              118
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NCAPD3 MUTATED        6     21      3
  NCAPD3 WILD-TYPE    153    230    162
D221V7, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              6              153
  CLUS_2             21              230
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPD3 MUTATED        3     12      9      4      2
  NCAPD3 WILD-TYPE    115    119    142     90     79
D221V8, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             12              119
  CLUS_3              9              142
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPD3 MUTATED        6     12      0      3      4
  NCAPD3 WILD-TYPE    112    124    115     37     67
D221V9, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              6              112
  CLUS_2             12              124
  CLUS_3              0              115
  CLUS_4              3               37
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPD3 MUTATED        2     12      6      1      4
  NCAPD3 WILD-TYPE     46     97    124    100     88
D221V10, multiclass
        clus
vv       NCAPD3 MUTATED NCAPD3 WILD-TYPE
  CLUS_1              2               46
  CLUS_2             12               97
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(222) Variable = CASP8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASP8 MUTATED        1      1      5     16
  CASP8 WILD-TYPE    134     91    167    160
D222V1, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             5             167
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP8 MUTATED        8      4      5
  CASP8 WILD-TYPE    207    151    157
D222V2, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             4             151
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASP8 MUTATED        7      8      5      1
  CASP8 WILD-TYPE    128    116    120     59
D222V3, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             8             116
  CLUS_3             5             120
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP8 MUTATED       11      4      6
  CASP8 WILD-TYPE    242     98     83
D222V4, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             6              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP8 MUTATED        3     11      8
  CASP8 WILD-TYPE    161    236    135
D222V5, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            11             236
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP8 MUTATED        2      7      5      3      5
  CASP8 WILD-TYPE    119     97     86    118    112
D222V6, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             7              97
  CLUS_3             5              86
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP8 MUTATED        6     11      6
  CASP8 WILD-TYPE    153    240    159
D222V7, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            11             240
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP8 MUTATED        3      7      7      3      3
  CASP8 WILD-TYPE    115    124    144     91     78
D222V8, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             124
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP8 MUTATED        3      5      2      2      3
  CASP8 WILD-TYPE    115    131    113     38     68
D222V9, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP8 MUTATED        0      4      5      3      3
  CASP8 WILD-TYPE     48    105    125     98     89
D222V10, multiclass
        clus
vv       CASP8 MUTATED CASP8 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(223) Variable = BRD8 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRD8 MUTATED        3      6      8     18
  BRD8 WILD-TYPE    132     86    164    158
D223V1, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            6             86
  CLUS_3            8            164
  CLUS_4           18            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD8 MUTATED       18      4     11
  BRD8 WILD-TYPE    197    151    151
D223V2, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1           18            197
  CLUS_2            4            151
  CLUS_3           11            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRD8 MUTATED        8      7      6      2
  BRD8 WILD-TYPE    127    117    119     58
D223V3, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            7            117
  CLUS_3            6            119
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD8 MUTATED       14      4      5
  BRD8 WILD-TYPE    239     98     84
D223V4, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1           14            239
  CLUS_2            4             98
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD8 MUTATED        4     17     12
  BRD8 WILD-TYPE    160    230    131
D223V5, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           17            230
  CLUS_3           12            131
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD8 MUTATED        8      8      8      2      7
  BRD8 WILD-TYPE    113     96     83    119    110
D223V6, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            8            113
  CLUS_2            8             96
  CLUS_3            8             83
  CLUS_4            2            119
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD8 MUTATED        7     18     10
  BRD8 WILD-TYPE    152    233    155
D223V7, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            7            152
  CLUS_2           18            233
  CLUS_3           10            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD8 MUTATED       10      7     13      1      4
  BRD8 WILD-TYPE    108    124    138     93     77
D223V8, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1           10            108
  CLUS_2            7            124
  CLUS_3           13            138
  CLUS_4            1             93
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD8 MUTATED        5      8     11      0      5
  BRD8 WILD-TYPE    113    128    104     40     66
D223V9, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            8            128
  CLUS_3           11            104
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD8 MUTATED        5      5     10      8      1
  BRD8 WILD-TYPE     43    104    120     93     91
D223V10, multiclass
        clus
vv       BRD8 MUTATED BRD8 WILD-TYPE
  CLUS_1            5             43
  CLUS_2            5            104
  CLUS_3           10            120
  CLUS_4            8             93
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(224) Variable = PET112L MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PET112L MUTATED        0      2      2      7
  PET112L WILD-TYPE    135     90    170    169
D224V1, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PET112L MUTATED        6      1      2
  PET112L WILD-TYPE    209    154    160
D224V2, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               6               209
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PET112L MUTATED        4      3      1      2
  PET112L WILD-TYPE    131    121    124     58
D224V3, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PET112L MUTATED        6      2      2
  PET112L WILD-TYPE    247    100     87
D224V4, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               6               247
  CLUS_2               2               100
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PET112L MUTATED        3      5      2
  PET112L WILD-TYPE    161    242    141
D224V5, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               3               161
  CLUS_2               5               242
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PET112L MUTATED        1      1      3      1      4
  PET112L WILD-TYPE    120    103     88    120    113
D224V6, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PET112L MUTATED        3      6      2
  PET112L WILD-TYPE    156    245    163
D224V7, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               3               156
  CLUS_2               6               245
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PET112L MUTATED        2      2      5      1      1
  PET112L WILD-TYPE    116    129    146     93     80
D224V8, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               129
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PET112L MUTATED        1      3      1      1      3
  PET112L WILD-TYPE    117    133    114     39     68
D224V9, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PET112L MUTATED        1      1      6      0      1
  PET112L WILD-TYPE     47    108    124    101     91
D224V10, multiclass
        clus
vv       PET112L MUTATED PET112L WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               6               124
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(225) Variable = RGS9BP MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS9BP MUTATED        1      0      1      7
  RGS9BP WILD-TYPE    134     92    171    169
D225V1, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RGS9BP MUTATED        6      1      1
  RGS9BP WILD-TYPE    209    154    161
D225V2, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS9BP MUTATED        3      2      2      0
  RGS9BP WILD-TYPE    132    122    123     60
D225V3, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RGS9BP MUTATED        4      1      2
  RGS9BP WILD-TYPE    249    101     87
D225V4, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RGS9BP MUTATED        0      5      4
  RGS9BP WILD-TYPE    164    242    139
D225V5, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              0              164
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS9BP MUTATED        1      1      3      0      4
  RGS9BP WILD-TYPE    120    103     88    121    113
D225V6, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RGS9BP MUTATED        1      4      4
  RGS9BP WILD-TYPE    158    247    161
D225V7, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              1              158
  CLUS_2              4              247
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS9BP MUTATED        2      4      1      0      2
  RGS9BP WILD-TYPE    116    127    150     94     79
D225V8, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS9BP MUTATED        0      4      2      1      0
  RGS9BP WILD-TYPE    118    132    113     39     71
D225V9, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS9BP MUTATED        0      4      1      2      0
  RGS9BP WILD-TYPE     48    105    129     99     92
D225V10, multiclass
        clus
vv       RGS9BP MUTATED RGS9BP WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              1              129
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(226) Variable = OR5M3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR5M3 MUTATED        4      0      9     12
  OR5M3 WILD-TYPE    131     92    163    164
D226V1, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             9             163
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR5M3 MUTATED       14      5      4
  OR5M3 WILD-TYPE    201    150    158
D226V2, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             5             150
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR5M3 MUTATED        6      6      2      1
  OR5M3 WILD-TYPE    129    118    123     59
D226V3, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR5M3 MUTATED        7      6      2
  OR5M3 WILD-TYPE    246     96     87
D226V4, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR5M3 MUTATED        7     15      3
  OR5M3 WILD-TYPE    157    232    140
D226V5, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            15             232
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR5M3 MUTATED        5      5     10      4      1
  OR5M3 WILD-TYPE    116     99     81    117    116
D226V6, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             5              99
  CLUS_3            10              81
  CLUS_4             4             117
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR5M3 MUTATED        6     18      1
  OR5M3 WILD-TYPE    153    233    164
D226V7, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            18             233
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR5M3 MUTATED        5     10      6      2      2
  OR5M3 WILD-TYPE    113    121    145     92     79
D226V8, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            10             121
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR5M3 MUTATED        5      9      1      0      5
  OR5M3 WILD-TYPE    113    127    114     40     66
D226V9, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             9             127
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR5M3 MUTATED        4      8      5      1      2
  OR5M3 WILD-TYPE     44    101    125    100     90
D226V10, multiclass
        clus
vv       OR5M3 MUTATED OR5M3 WILD-TYPE
  CLUS_1             4              44
  CLUS_2             8             101
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(227) Variable = FERMT2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FERMT2 MUTATED        1      3      1      9
  FERMT2 WILD-TYPE    134     89    171    167
D227V1, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3               89
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FERMT2 MUTATED        9      2      1
  FERMT2 WILD-TYPE    206    153    161
D227V2, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FERMT2 MUTATED        5      6      0      0
  FERMT2 WILD-TYPE    130    118    125     60
D227V3, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              6              118
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FERMT2 MUTATED        9      2      0
  FERMT2 WILD-TYPE    244    100     89
D227V4, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FERMT2 MUTATED        2     10      2
  FERMT2 WILD-TYPE    162    237    141
D227V5, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             10              237
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FERMT2 MUTATED        3      2      8      1      0
  FERMT2 WILD-TYPE    118    102     83    120    117
D227V6, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              2              102
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FERMT2 MUTATED        2     11      1
  FERMT2 WILD-TYPE    157    240    164
D227V7, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             11              240
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FERMT2 MUTATED        0      8      5      1      0
  FERMT2 WILD-TYPE    118    123    146     93     81
D227V8, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              8              123
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FERMT2 MUTATED        0      9      1      1      1
  FERMT2 WILD-TYPE    118    127    114     39     70
D227V9, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              9              127
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FERMT2 MUTATED        0      6      5      0      1
  FERMT2 WILD-TYPE     48    103    125    101     91
D227V10, multiclass
        clus
vv       FERMT2 MUTATED FERMT2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(228) Variable = STX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STX2 MUTATED        0      0      0      7
  STX2 WILD-TYPE    135     92    172    169
D228V1, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  STX2 MUTATED        7      0      0
  STX2 WILD-TYPE    208    155    162
D228V2, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STX2 MUTATED        3      2      1      0
  STX2 WILD-TYPE    132    122    124     60
D228V3, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  STX2 MUTATED        5      0      1
  STX2 WILD-TYPE    248    102     88
D228V4, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  STX2 MUTATED        2      3      2
  STX2 WILD-TYPE    162    244    141
D228V5, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX2 MUTATED        0      1      4      0      2
  STX2 WILD-TYPE    121    103     87    121    115
D228V6, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  STX2 MUTATED        1      4      2
  STX2 WILD-TYPE    158    247    163
D228V7, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX2 MUTATED        0      5      0      0      2
  STX2 WILD-TYPE    118    126    151     94     79
D228V8, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            0            151
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX2 MUTATED        0      4      2      1      0
  STX2 WILD-TYPE    118    132    113     39     71
D228V9, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX2 MUTATED        1      4      1      1      0
  STX2 WILD-TYPE     47    105    129    100     92
D228V10, multiclass
        clus
vv       STX2 MUTATED STX2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(229) Variable = ABCA6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCA6 MUTATED        6      1      2     13
  ABCA6 WILD-TYPE    129     91    170    163
D229V1, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA6 MUTATED       12      4      3
  ABCA6 WILD-TYPE    203    151    159
D229V2, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCA6 MUTATED       11      4      2      0
  ABCA6 WILD-TYPE    124    120    123     60
D229V3, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA6 MUTATED       14      1      2
  ABCA6 WILD-TYPE    239    101     87
D229V4, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA6 MUTATED        6     11      5
  ABCA6 WILD-TYPE    158    236    138
D229V5, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            11             236
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA6 MUTATED        2      3      9      5      3
  ABCA6 WILD-TYPE    119    101     82    116    114
D229V6, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             9              82
  CLUS_4             5             116
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA6 MUTATED        6     14      3
  ABCA6 WILD-TYPE    153    237    162
D229V7, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            14             237
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA6 MUTATED        3      9      7      2      2
  ABCA6 WILD-TYPE    115    122    144     92     79
D229V8, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA6 MUTATED        4      8      2      2      3
  ABCA6 WILD-TYPE    114    128    113     38     68
D229V9, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA6 MUTATED        2      7      5      3      2
  ABCA6 WILD-TYPE     46    102    125     98     90
D229V10, multiclass
        clus
vv       ABCA6 MUTATED ABCA6 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(230) Variable = PIAS1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIAS1 MUTATED        3      2      1      8
  PIAS1 WILD-TYPE    132     90    171    168
D230V1, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PIAS1 MUTATED        8      2      3
  PIAS1 WILD-TYPE    207    153    159
D230V2, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIAS1 MUTATED        3      6      2      1
  PIAS1 WILD-TYPE    132    118    123     59
D230V3, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PIAS1 MUTATED        7      3      2
  PIAS1 WILD-TYPE    246     99     87
D230V4, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PIAS1 MUTATED        3      9      1
  PIAS1 WILD-TYPE    161    238    142
D230V5, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             9             238
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIAS1 MUTATED        1      1      7      2      2
  PIAS1 WILD-TYPE    120    103     84    119    115
D230V6, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PIAS1 MUTATED        1      9      4
  PIAS1 WILD-TYPE    158    242    161
D230V7, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIAS1 MUTATED        2      5      4      2      1
  PIAS1 WILD-TYPE    116    126    147     92     80
D230V8, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIAS1 MUTATED        1      5      1      0      6
  PIAS1 WILD-TYPE    117    131    114     40     65
D230V9, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIAS1 MUTATED        0      6      4      1      2
  PIAS1 WILD-TYPE     48    103    126    100     90
D230V10, multiclass
        clus
vv       PIAS1 MUTATED PIAS1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(231) Variable = USP26 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP26 MUTATED        4      1      2     18
  USP26 WILD-TYPE    131     91    170    158
D231V1, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            18             158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP26 MUTATED       13      3      5
  USP26 WILD-TYPE    202    152    157
D231V2, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             3             152
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP26 MUTATED        7      7      6      1
  USP26 WILD-TYPE    128    117    119     59
D231V3, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             7             117
  CLUS_3             6             119
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP26 MUTATED       13      6      2
  USP26 WILD-TYPE    240     96     87
D231V4, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP26 MUTATED        3     12      8
  USP26 WILD-TYPE    161    235    135
D231V5, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            12             235
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP26 MUTATED        2      4     11      1      5
  USP26 WILD-TYPE    119    100     80    120    112
D231V6, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3            11              80
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP26 MUTATED        0     14     11
  USP26 WILD-TYPE    159    237    154
D231V7, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            14             237
  CLUS_3            11             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP26 MUTATED        4      9      6      0      6
  USP26 WILD-TYPE    114    122    145     94     75
D231V8, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             122
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             6              75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP26 MUTATED        0      7      5      3      5
  USP26 WILD-TYPE    118    129    110     37     66
D231V9, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             7             129
  CLUS_3             5             110
  CLUS_4             3              37
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP26 MUTATED        1      6      5      8      0
  USP26 WILD-TYPE     47    103    125     93     92
D231V10, multiclass
        clus
vv       USP26 MUTATED USP26 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             8              93
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(232) Variable = MLH1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLH1 MUTATED        0      0      2      7
  MLH1 WILD-TYPE    135     92    170    169
D232V1, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLH1 MUTATED        2      3      3
  MLH1 WILD-TYPE    213    152    159
D232V2, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            2            213
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MLH1 MUTATED        1      5      0      1
  MLH1 WILD-TYPE    134    119    125     59
D232V3, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLH1 MUTATED        1      5      1
  MLH1 WILD-TYPE    252     97     88
D232V4, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLH1 MUTATED        3      5      2
  MLH1 WILD-TYPE    161    242    141
D232V5, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            5            242
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLH1 MUTATED        1      2      2      2      3
  MLH1 WILD-TYPE    120    102     89    119    114
D232V6, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MLH1 MUTATED        2      6      2
  MLH1 WILD-TYPE    157    245    163
D232V7, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLH1 MUTATED        0      2      6      2      0
  MLH1 WILD-TYPE    118    129    145     92     81
D232V8, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            6            145
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLH1 MUTATED        2      3      0      0      3
  MLH1 WILD-TYPE    116    133    115     40     68
D232V9, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MLH1 MUTATED        0      3      3      0      2
  MLH1 WILD-TYPE     48    106    127    101     90
D232V10, multiclass
        clus
vv       MLH1 MUTATED MLH1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(233) Variable = SLC22A6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC22A6 MUTATED        1      1      2     12
  SLC22A6 WILD-TYPE    134     91    170    164
D233V1, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC22A6 MUTATED        7      3      2
  SLC22A6 WILD-TYPE    208    152    160
D233V2, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC22A6 MUTATED        7      3      4      1
  SLC22A6 WILD-TYPE    128    121    121     59
D233V3, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               7               128
  CLUS_2               3               121
  CLUS_3               4               121
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC22A6 MUTATED       10      1      4
  SLC22A6 WILD-TYPE    243    101     85
D233V4, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1              10               243
  CLUS_2               1               101
  CLUS_3               4                85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC22A6 MUTATED        2      8      5
  SLC22A6 WILD-TYPE    162    239    138
D233V5, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               8               239
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A6 MUTATED        0      5      5      1      4
  SLC22A6 WILD-TYPE    121     99     86    120    113
D233V6, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               5                99
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC22A6 MUTATED        3     10      3
  SLC22A6 WILD-TYPE    156    241    162
D233V7, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              10               241
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A6 MUTATED        1      5      5      2      3
  SLC22A6 WILD-TYPE    117    126    146     92     78
D233V8, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               5               146
  CLUS_4               2                92
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A6 MUTATED        3      1      2      2      3
  SLC22A6 WILD-TYPE    115    135    113     38     68
D233V9, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               1               135
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A6 MUTATED        0      2      6      1      2
  SLC22A6 WILD-TYPE     48    107    124    100     90
D233V10, multiclass
        clus
vv       SLC22A6 MUTATED SLC22A6 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               6               124
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(234) Variable = EPHA2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHA2 MUTATED        1      3      4     24
  EPHA2 WILD-TYPE    134     89    168    152
D234V1, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             4             168
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA2 MUTATED       20      6      5
  EPHA2 WILD-TYPE    195    149    157
D234V2, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1            20             195
  CLUS_2             6             149
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHA2 MUTATED        9      6      1      5
  EPHA2 WILD-TYPE    126    118    124     55
D234V3, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA2 MUTATED       14      6      1
  EPHA2 WILD-TYPE    239     96     88
D234V4, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA2 MUTATED        4     22      7
  EPHA2 WILD-TYPE    160    225    136
D234V5, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            22             225
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA2 MUTATED        2      9     14      4      4
  EPHA2 WILD-TYPE    119     95     77    117    113
D234V6, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             9              95
  CLUS_3            14              77
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA2 MUTATED        4     24      5
  EPHA2 WILD-TYPE    155    227    160
D234V7, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            24             227
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA2 MUTATED        2     12     15      3      1
  EPHA2 WILD-TYPE    116    119    136     91     80
D234V8, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            12             119
  CLUS_3            15             136
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA2 MUTATED        5     13      4      2      5
  EPHA2 WILD-TYPE    113    123    111     38     66
D234V9, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            13             123
  CLUS_3             4             111
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA2 MUTATED        0     13     10      3      3
  EPHA2 WILD-TYPE     48     96    120     98     89
D234V10, multiclass
        clus
vv       EPHA2 MUTATED EPHA2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2            13              96
  CLUS_3            10             120
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(235) Variable = DAO MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DAO MUTATED        1      2      2     10
  DAO WILD-TYPE    134     90    170    166
D235V1, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           1           134
  CLUS_2           2            90
  CLUS_3           2           170
  CLUS_4          10           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DAO MUTATED        8      1      3
  DAO WILD-TYPE    207    154    159
D235V2, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           8           207
  CLUS_2           1           154
  CLUS_3           3           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DAO MUTATED        5      3      1      2
  DAO WILD-TYPE    130    121    124     58
D235V3, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           5           130
  CLUS_2           3           121
  CLUS_3           1           124
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DAO MUTATED        8      3      0
  DAO WILD-TYPE    245     99     89
D235V4, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           8           245
  CLUS_2           3            99
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DAO MUTATED        2      9      4
  DAO WILD-TYPE    162    238    139
D235V5, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           2           162
  CLUS_2           9           238
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAO MUTATED        2      4      6      0      3
  DAO WILD-TYPE    119    100     85    121    114
D235V6, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           2           119
  CLUS_2           4           100
  CLUS_3           6            85
  CLUS_4           0           121
  CLUS_5           3           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DAO MUTATED        1     11      3
  DAO WILD-TYPE    158    240    162
D235V7, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           1           158
  CLUS_2          11           240
  CLUS_3           3           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAO MUTATED        2      5      4      0      4
  DAO WILD-TYPE    116    126    147     94     77
D235V8, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           2           116
  CLUS_2           5           126
  CLUS_3           4           147
  CLUS_4           0            94
  CLUS_5           4            77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAO MUTATED        0      3      2      1      4
  DAO WILD-TYPE    118    133    113     39     67
D235V9, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           0           118
  CLUS_2           3           133
  CLUS_3           2           113
  CLUS_4           1            39
  CLUS_5           4            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAO MUTATED        1      2      4      3      0
  DAO WILD-TYPE     47    107    126     98     92
D235V10, multiclass
        clus
vv       DAO MUTATED DAO WILD-TYPE
  CLUS_1           1            47
  CLUS_2           2           107
  CLUS_3           4           126
  CLUS_4           3            98
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(236) Variable = CD79A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD79A MUTATED        0      1      0      8
  CD79A WILD-TYPE    135     91    172    168
D236V1, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD79A MUTATED        5      0      2
  CD79A WILD-TYPE    210    155    160
D236V2, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD79A MUTATED        2      4      0      1
  CD79A WILD-TYPE    133    120    125     59
D236V3, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD79A MUTATED        5      2      0
  CD79A WILD-TYPE    248    100     89
D236V4, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD79A MUTATED        1      6      1
  CD79A WILD-TYPE    163    241    142
D236V5, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD79A MUTATED        0      3      3      0      2
  CD79A WILD-TYPE    121    101     88    121    115
D236V6, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CD79A MUTATED        0      7      2
  CD79A WILD-TYPE    159    244    163
D236V7, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD79A MUTATED        1      4      4      0      0
  CD79A WILD-TYPE    117    127    147     94     81
D236V8, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD79A MUTATED        0      4      0      0      3
  CD79A WILD-TYPE    118    132    115     40     68
D236V9, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD79A MUTATED        0      3      4      0      0
  CD79A WILD-TYPE     48    106    126    101     92
D236V10, multiclass
        clus
vv       CD79A MUTATED CD79A WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(237) Variable = RAD51AP2 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAD51AP2 MUTATED        2      2      2     14
  RAD51AP2 WILD-TYPE    133     90    170    162
D237V1, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                 90
  CLUS_3                2                170
  CLUS_4               14                162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RAD51AP2 MUTATED       12      1      4
  RAD51AP2 WILD-TYPE    203    154    158
D237V2, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1               12                203
  CLUS_2                1                154
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAD51AP2 MUTATED        5      9      1      1
  RAD51AP2 WILD-TYPE    130    115    124     59
D237V3, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                5                130
  CLUS_2                9                115
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RAD51AP2 MUTATED       11      5      0
  RAD51AP2 WILD-TYPE    242     97     89
D237V4, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1               11                242
  CLUS_2                5                 97
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RAD51AP2 MUTATED        3     12      5
  RAD51AP2 WILD-TYPE    161    235    138
D237V5, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               12                235
  CLUS_3                5                138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD51AP2 MUTATED        3      1     11      1      4
  RAD51AP2 WILD-TYPE    118    103     80    120    113
D237V6, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                1                103
  CLUS_3               11                 80
  CLUS_4                1                120
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RAD51AP2 MUTATED        4     14      2
  RAD51AP2 WILD-TYPE    155    237    163
D237V7, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                4                155
  CLUS_2               14                237
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD51AP2 MUTATED        3      9      7      1      0
  RAD51AP2 WILD-TYPE    115    122    144     93     81
D237V8, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                9                122
  CLUS_3                7                144
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD51AP2 MUTATED        1      8      0      2      2
  RAD51AP2 WILD-TYPE    117    128    115     38     69
D237V9, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                8                128
  CLUS_3                0                115
  CLUS_4                2                 38
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD51AP2 MUTATED        1      6      4      1      1
  RAD51AP2 WILD-TYPE     47    103    126    100     91
D237V10, multiclass
        clus
vv       RAD51AP2 MUTATED RAD51AP2 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                6                103
  CLUS_3                4                126
  CLUS_4                1                100
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(238) Variable = IPO5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IPO5 MUTATED        3      4      6     12
  IPO5 WILD-TYPE    132     88    166    164
D238V1, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4             88
  CLUS_3            6            166
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IPO5 MUTATED       10      6      5
  IPO5 WILD-TYPE    205    149    157
D238V2, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            6            149
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IPO5 MUTATED        8      8      6      1
  IPO5 WILD-TYPE    127    116    119     59
D238V3, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            8            116
  CLUS_3            6            119
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IPO5 MUTATED       13      6      4
  IPO5 WILD-TYPE    240     96     85
D238V4, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            6             96
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IPO5 MUTATED        5      9     11
  IPO5 WILD-TYPE    159    238    132
D238V5, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            5            159
  CLUS_2            9            238
  CLUS_3           11            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO5 MUTATED        4      3      7      3      8
  IPO5 WILD-TYPE    117    101     84    118    109
D238V6, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            3            101
  CLUS_3            7             84
  CLUS_4            3            118
  CLUS_5            8            109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IPO5 MUTATED        4     12      9
  IPO5 WILD-TYPE    155    239    156
D238V7, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           12            239
  CLUS_3            9            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO5 MUTATED        5      6      8      3      3
  IPO5 WILD-TYPE    113    125    143     91     78
D238V8, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            6            125
  CLUS_3            8            143
  CLUS_4            3             91
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO5 MUTATED        4      5      5      0      3
  IPO5 WILD-TYPE    114    131    110     40     68
D238V9, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            5            131
  CLUS_3            5            110
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO5 MUTATED        2      3      5      4      3
  IPO5 WILD-TYPE     46    106    125     97     89
D238V10, multiclass
        clus
vv       IPO5 MUTATED IPO5 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            5            125
  CLUS_4            4             97
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(239) Variable = MYEOV MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYEOV MUTATED        2      2      1      8
  MYEOV WILD-TYPE    133     90    171    168
D239V1, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYEOV MUTATED        9      1      2
  MYEOV WILD-TYPE    206    154    160
D239V2, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYEOV MUTATED        6      4      0      0
  MYEOV WILD-TYPE    129    120    125     60
D239V3, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYEOV MUTATED        7      3      0
  MYEOV WILD-TYPE    246     99     89
D239V4, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             7             246
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYEOV MUTATED        3      8      2
  MYEOV WILD-TYPE    161    239    141
D239V5, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYEOV MUTATED        0      3      6      3      1
  MYEOV WILD-TYPE    121    101     85    118    116
D239V6, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYEOV MUTATED        1      9      3
  MYEOV WILD-TYPE    158    242    162
D239V7, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYEOV MUTATED        1      6      2      2      2
  MYEOV WILD-TYPE    117    125    149     92     79
D239V8, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             2             149
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYEOV MUTATED        1      2      3      2      3
  MYEOV WILD-TYPE    117    134    112     38     68
D239V9, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYEOV MUTATED        1      3      4      1      2
  MYEOV WILD-TYPE     47    106    126    100     90
D239V10, multiclass
        clus
vv       MYEOV MUTATED MYEOV WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(240) Variable = BCKDHA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCKDHA MUTATED        0      1      2      7
  BCKDHA WILD-TYPE    135     91    170    169
D240V1, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCKDHA MUTATED        6      1      2
  BCKDHA WILD-TYPE    209    154    160
D240V2, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCKDHA MUTATED        4      6      0      0
  BCKDHA WILD-TYPE    131    118    125     60
D240V3, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              4              131
  CLUS_2              6              118
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCKDHA MUTATED        5      4      1
  BCKDHA WILD-TYPE    248     98     88
D240V4, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              5              248
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCKDHA MUTATED        1      6      3
  BCKDHA WILD-TYPE    163    241    140
D240V5, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCKDHA MUTATED        1      2      3      1      3
  BCKDHA WILD-TYPE    120    102     88    120    114
D240V6, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCKDHA MUTATED        2      8      1
  BCKDHA WILD-TYPE    157    243    164
D240V7, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCKDHA MUTATED        3      3      5      0      0
  BCKDHA WILD-TYPE    115    128    146     94     81
D240V8, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              128
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCKDHA MUTATED        1      3      0      1      3
  BCKDHA WILD-TYPE    117    133    115     39     68
D240V9, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCKDHA MUTATED        0      3      3      2      0
  BCKDHA WILD-TYPE     48    106    127     99     92
D240V10, multiclass
        clus
vv       BCKDHA MUTATED BCKDHA WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(241) Variable = TRAM1L1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRAM1L1 MUTATED        6      2      1     12
  TRAM1L1 WILD-TYPE    129     90    171    164
D241V1, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TRAM1L1 MUTATED       16      1      1
  TRAM1L1 WILD-TYPE    199    154    161
D241V2, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1              16               199
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRAM1L1 MUTATED        9      5      3      1
  TRAM1L1 WILD-TYPE    126    119    122     59
D241V3, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               5               119
  CLUS_3               3               122
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TRAM1L1 MUTATED       12      4      2
  TRAM1L1 WILD-TYPE    241     98     87
D241V4, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               4                98
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TRAM1L1 MUTATED        4     12      5
  TRAM1L1 WILD-TYPE    160    235    138
D241V5, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               4               160
  CLUS_2              12               235
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRAM1L1 MUTATED        4      3      9      1      4
  TRAM1L1 WILD-TYPE    117    101     82    120    113
D241V6, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               4               117
  CLUS_2               3               101
  CLUS_3               9                82
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TRAM1L1 MUTATED        3     14      4
  TRAM1L1 WILD-TYPE    156    237    161
D241V7, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              14               237
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRAM1L1 MUTATED        4      9      6      0      2
  TRAM1L1 WILD-TYPE    114    122    145     94     79
D241V8, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               9               122
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRAM1L1 MUTATED        2      6      2      2      6
  TRAM1L1 WILD-TYPE    116    130    113     38     65
D241V9, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               6               130
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRAM1L1 MUTATED        3      8      4      3      0
  TRAM1L1 WILD-TYPE     45    101    126     98     92
D241V10, multiclass
        clus
vv       TRAM1L1 MUTATED TRAM1L1 WILD-TYPE
  CLUS_1               3                45
  CLUS_2               8               101
  CLUS_3               4               126
  CLUS_4               3                98
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(242) Variable = KIAA1704 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1704 MUTATED        1      0      2      3
  KIAA1704 WILD-TYPE    134     92    170    173
D242V1, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                2                170
  CLUS_4                3                173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1704 MUTATED        4      1      1
  KIAA1704 WILD-TYPE    211    154    161
D242V2, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1704 MUTATED        2      1      0      0
  KIAA1704 WILD-TYPE    133    123    125     60
D242V3, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                123
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1704 MUTATED        3      0      0
  KIAA1704 WILD-TYPE    250    102     89
D242V4, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                0                102
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1704 MUTATED        1      5      0
  KIAA1704 WILD-TYPE    163    242    143
D242V5, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                5                242
  CLUS_3                0                143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1704 MUTATED        1      0      4      1      0
  KIAA1704 WILD-TYPE    120    104     87    120    117
D242V6, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                4                 87
  CLUS_4                1                120
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1704 MUTATED        1      4      1
  KIAA1704 WILD-TYPE    158    247    164
D242V7, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1704 MUTATED        0      4      0      1      1
  KIAA1704 WILD-TYPE    118    127    151     93     80
D242V8, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                127
  CLUS_3                0                151
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1704 MUTATED        1      3      0      1      0
  KIAA1704 WILD-TYPE    117    133    115     39     71
D242V9, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                133
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1704 MUTATED        0      3      1      0      1
  KIAA1704 WILD-TYPE     48    106    129    101     91
D242V10, multiclass
        clus
vv       KIAA1704 MUTATED KIAA1704 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                1                129
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(243) Variable = GPC2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPC2 MUTATED        1      1      2      5
  GPC2 WILD-TYPE    134     91    170    171
D243V1, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC2 MUTATED        7      1      1
  GPC2 WILD-TYPE    208    154    161
D243V2, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPC2 MUTATED        4      3      0      0
  GPC2 WILD-TYPE    131    121    125     60
D243V3, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC2 MUTATED        5      2      0
  GPC2 WILD-TYPE    248    100     89
D243V4, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC2 MUTATED        2      6      1
  GPC2 WILD-TYPE    162    241    142
D243V5, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            6            241
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC2 MUTATED        0      2      5      1      1
  GPC2 WILD-TYPE    121    102     86    120    116
D243V6, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC2 MUTATED        1      7      1
  GPC2 WILD-TYPE    158    244    164
D243V7, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            7            244
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC2 MUTATED        0      5      3      1      0
  GPC2 WILD-TYPE    118    126    148     93     81
D243V8, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC2 MUTATED        1      4      0      1      2
  GPC2 WILD-TYPE    117    132    115     39     69
D243V9, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC2 MUTATED        0      3      4      0      1
  GPC2 WILD-TYPE     48    106    126    101     91
D243V10, multiclass
        clus
vv       GPC2 MUTATED GPC2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(244) Variable = FILIP1L MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FILIP1L MUTATED        2      3      3     15
  FILIP1L WILD-TYPE    133     89    169    161
D244V1, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3                89
  CLUS_3               3               169
  CLUS_4              15               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FILIP1L MUTATED       12      4      2
  FILIP1L WILD-TYPE    203    151    160
D244V2, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1              12               203
  CLUS_2               4               151
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FILIP1L MUTATED       12      6      0      3
  FILIP1L WILD-TYPE    123    118    125     57
D244V3, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1              12               123
  CLUS_2               6               118
  CLUS_3               0               125
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FILIP1L MUTATED       17      3      1
  FILIP1L WILD-TYPE    236     99     88
D244V4, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1              17               236
  CLUS_2               3                99
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FILIP1L MUTATED        6     12      4
  FILIP1L WILD-TYPE    158    235    139
D244V5, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               6               158
  CLUS_2              12               235
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FILIP1L MUTATED        4      6      8      2      2
  FILIP1L WILD-TYPE    117     98     83    119    115
D244V6, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               4               117
  CLUS_2               6                98
  CLUS_3               8                83
  CLUS_4               2               119
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FILIP1L MUTATED        3     17      3
  FILIP1L WILD-TYPE    156    234    162
D244V7, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               3               156
  CLUS_2              17               234
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FILIP1L MUTATED        4      8      9      1      1
  FILIP1L WILD-TYPE    114    123    142     93     80
D244V8, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               4               114
  CLUS_2               8               123
  CLUS_3               9               142
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FILIP1L MUTATED        2      4      3      2      7
  FILIP1L WILD-TYPE    116    132    112     38     64
D244V9, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               132
  CLUS_3               3               112
  CLUS_4               2                38
  CLUS_5               7                64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FILIP1L MUTATED        2      5      8      2      1
  FILIP1L WILD-TYPE     46    104    122     99     91
D244V10, multiclass
        clus
vv       FILIP1L MUTATED FILIP1L WILD-TYPE
  CLUS_1               2                46
  CLUS_2               5               104
  CLUS_3               8               122
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(245) Variable = GPSM3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPSM3 MUTATED        3      2      1      6
  GPSM3 WILD-TYPE    132     90    171    170
D245V1, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPSM3 MUTATED        7      2      0
  GPSM3 WILD-TYPE    208    153    162
D245V2, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPSM3 MUTATED        4      4      0      0
  GPSM3 WILD-TYPE    131    120    125     60
D245V3, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPSM3 MUTATED        4      4      0
  GPSM3 WILD-TYPE    249     98     89
D245V4, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPSM3 MUTATED        0      9      3
  GPSM3 WILD-TYPE    164    238    140
D245V5, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPSM3 MUTATED        1      5      5      0      1
  GPSM3 WILD-TYPE    120     99     86    121    116
D245V6, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPSM3 MUTATED        1     11      0
  GPSM3 WILD-TYPE    158    240    165
D245V7, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            11             240
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPSM3 MUTATED        2      6      4      0      0
  GPSM3 WILD-TYPE    116    125    147     94     81
D245V8, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPSM3 MUTATED        1      3      0      1      1
  GPSM3 WILD-TYPE    117    133    115     39     70
D245V9, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPSM3 MUTATED        0      3      3      0      0
  GPSM3 WILD-TYPE     48    106    127    101     92
D245V10, multiclass
        clus
vv       GPSM3 MUTATED GPSM3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(246) Variable = FAM82A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM82A1 MUTATED        1      1      0      5
  FAM82A1 WILD-TYPE    134     91    172    171
D246V1, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM82A1 MUTATED        3      1      1
  FAM82A1 WILD-TYPE    212    154    161
D246V2, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM82A1 MUTATED        1      3      0      2
  FAM82A1 WILD-TYPE    134    121    125     58
D246V3, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM82A1 MUTATED        4      2      0
  FAM82A1 WILD-TYPE    249    100     89
D246V4, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM82A1 MUTATED        0      6      1
  FAM82A1 WILD-TYPE    164    241    142
D246V5, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM82A1 MUTATED        1      3      2      0      1
  FAM82A1 WILD-TYPE    120    101     89    121    116
D246V6, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM82A1 MUTATED        0      6      1
  FAM82A1 WILD-TYPE    159    245    164
D246V7, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               6               245
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM82A1 MUTATED        1      2      4      0      0
  FAM82A1 WILD-TYPE    117    129    147     94     81
D246V8, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               129
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM82A1 MUTATED        0      2      0      1      2
  FAM82A1 WILD-TYPE    118    134    115     39     69
D246V9, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM82A1 MUTATED        0      1      4      0      0
  FAM82A1 WILD-TYPE     48    108    126    101     92
D246V10, multiclass
        clus
vv       FAM82A1 MUTATED FAM82A1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               4               126
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(247) Variable = KNTC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KNTC1 MUTATED        3      5      6     12
  KNTC1 WILD-TYPE    132     87    166    164
D247V1, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5              87
  CLUS_3             6             166
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KNTC1 MUTATED       11      4      4
  KNTC1 WILD-TYPE    204    151    158
D247V2, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             4             151
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KNTC1 MUTATED        6     10      2      4
  KNTC1 WILD-TYPE    129    114    123     56
D247V3, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            10             114
  CLUS_3             2             123
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KNTC1 MUTATED       12      8      2
  KNTC1 WILD-TYPE    241     94     87
D247V4, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             8              94
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KNTC1 MUTATED        9     12      5
  KNTC1 WILD-TYPE    155    235    138
D247V5, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             9             155
  CLUS_2            12             235
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KNTC1 MUTATED        1      4     10      5      6
  KNTC1 WILD-TYPE    120    100     81    116    111
D247V6, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3            10              81
  CLUS_4             5             116
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KNTC1 MUTATED        7     15      4
  KNTC1 WILD-TYPE    152    236    161
D247V7, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            15             236
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KNTC1 MUTATED        2     11      8      4      1
  KNTC1 WILD-TYPE    116    120    143     90     80
D247V8, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            11             120
  CLUS_3             8             143
  CLUS_4             4              90
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KNTC1 MUTATED        3      6      0      5      3
  KNTC1 WILD-TYPE    115    130    115     35     68
D247V9, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             0             115
  CLUS_4             5              35
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KNTC1 MUTATED        2      6      4      1      4
  KNTC1 WILD-TYPE     46    103    126    100     88
D247V10, multiclass
        clus
vv       KNTC1 MUTATED KNTC1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(248) Variable = ERBB4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERBB4 MUTATED       19      5     15     26
  ERBB4 WILD-TYPE    116     87    157    150
D248V1, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1            19             116
  CLUS_2             5              87
  CLUS_3            15             157
  CLUS_4            26             150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB4 MUTATED       40      8     11
  ERBB4 WILD-TYPE    175    147    151
D248V2, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1            40             175
  CLUS_2             8             147
  CLUS_3            11             151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERBB4 MUTATED       18     16     14      7
  ERBB4 WILD-TYPE    117    108    111     53
D248V3, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1            18             117
  CLUS_2            16             108
  CLUS_3            14             111
  CLUS_4             7              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB4 MUTATED       33      9     13
  ERBB4 WILD-TYPE    220     93     76
D248V4, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1            33             220
  CLUS_2             9              93
  CLUS_3            13              76
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB4 MUTATED        9     39     17
  ERBB4 WILD-TYPE    155    208    126
D248V5, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1             9             155
  CLUS_2            39             208
  CLUS_3            17             126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB4 MUTATED       10     16     18      6     15
  ERBB4 WILD-TYPE    111     88     73    115    102
D248V6, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1            10             111
  CLUS_2            16              88
  CLUS_3            18              73
  CLUS_4             6             115
  CLUS_5            15             102
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB4 MUTATED        7     43     16
  ERBB4 WILD-TYPE    152    208    149
D248V7, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            43             208
  CLUS_3            16             149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB4 MUTATED       15     30     15      1      5
  ERBB4 WILD-TYPE    103    101    136     93     76
D248V8, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1            15             103
  CLUS_2            30             101
  CLUS_3            15             136
  CLUS_4             1              93
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB4 MUTATED        7     23     11      7     10
  ERBB4 WILD-TYPE    111    113    104     33     61
D248V9, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1             7             111
  CLUS_2            23             113
  CLUS_3            11             104
  CLUS_4             7              33
  CLUS_5            10              61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB4 MUTATED        3     25     16     13      1
  ERBB4 WILD-TYPE     45     84    114     88     91
D248V10, multiclass
        clus
vv       ERBB4 MUTATED ERBB4 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            25              84
  CLUS_3            16             114
  CLUS_4            13              88
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(249) Variable = NCAPH MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH MUTATED        1      0      2      9
  NCAPH WILD-TYPE    134     92    170    167
D249V1, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCAPH MUTATED        6      1      2
  NCAPH WILD-TYPE    209    154    160
D249V2, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCAPH MUTATED        5      3      1      3
  NCAPH WILD-TYPE    130    121    124     57
D249V3, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCAPH MUTATED        9      2      1
  NCAPH WILD-TYPE    244    100     88
D249V4, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCAPH MUTATED        2      4      5
  NCAPH WILD-TYPE    162    243    138
D249V5, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPH MUTATED        0      2      4      1      4
  NCAPH WILD-TYPE    121    102     87    120    113
D249V6, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCAPH MUTATED        1      7      5
  NCAPH WILD-TYPE    158    244    160
D249V7, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPH MUTATED        2      3      6      1      1
  NCAPH WILD-TYPE    116    128    145     93     80
D249V8, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPH MUTATED        0      2      1      1      4
  NCAPH WILD-TYPE    118    134    114     39     67
D249V9, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCAPH MUTATED        0      3      3      1      1
  NCAPH WILD-TYPE     48    106    127    100     91
D249V10, multiclass
        clus
vv       NCAPH MUTATED NCAPH WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(250) Variable = ERBB2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERBB2 MUTATED        6      3      5     16
  ERBB2 WILD-TYPE    129     89    167    160
D250V1, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3              89
  CLUS_3             5             167
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB2 MUTATED       19      1      7
  ERBB2 WILD-TYPE    196    154    155
D250V2, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             1             154
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERBB2 MUTATED        5      8      2      2
  ERBB2 WILD-TYPE    130    116    123     58
D250V3, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             8             116
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB2 MUTATED       10      5      2
  ERBB2 WILD-TYPE    243     97     87
D250V4, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB2 MUTATED        5     16      8
  ERBB2 WILD-TYPE    159    231    135
D250V5, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            16             231
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB2 MUTATED        5      8      8      2      6
  ERBB2 WILD-TYPE    116     96     83    119    111
D250V6, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             8              96
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB2 MUTATED        7     17      6
  ERBB2 WILD-TYPE    152    234    159
D250V7, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            17             234
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB2 MUTATED        4     12     12      0      2
  ERBB2 WILD-TYPE    114    119    139     94     79
D250V8, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            12             119
  CLUS_3            12             139
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB2 MUTATED        5      9      4      0      6
  ERBB2 WILD-TYPE    113    127    111     40     65
D250V9, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             9             127
  CLUS_3             4             111
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB2 MUTATED        2     10     10      2      0
  ERBB2 WILD-TYPE     46     99    120     99     92
D250V10, multiclass
        clus
vv       ERBB2 MUTATED ERBB2 WILD-TYPE
  CLUS_1             2              46
  CLUS_2            10              99
  CLUS_3            10             120
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(251) Variable = ART1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ART1 MUTATED        2      0      0      7
  ART1 WILD-TYPE    133     92    172    169
D251V1, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART1 MUTATED        5      1      1
  ART1 WILD-TYPE    210    154    161
D251V2, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ART1 MUTATED        2      4      0      1
  ART1 WILD-TYPE    133    120    125     59
D251V3, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART1 MUTATED        4      3      0
  ART1 WILD-TYPE    249     99     89
D251V4, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART1 MUTATED        2      6      1
  ART1 WILD-TYPE    162    241    142
D251V5, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            6            241
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART1 MUTATED        1      3      4      1      0
  ART1 WILD-TYPE    120    101     87    120    117
D251V6, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART1 MUTATED        1      8      0
  ART1 WILD-TYPE    158    243    165
D251V7, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            8            243
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART1 MUTATED        1      5      3      0      0
  ART1 WILD-TYPE    117    126    148     94     81
D251V8, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART1 MUTATED        0      2      0      0      5
  ART1 WILD-TYPE    118    134    115     40     66
D251V9, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART1 MUTATED        0      3      4      0      0
  ART1 WILD-TYPE     48    106    126    101     92
D251V10, multiclass
        clus
vv       ART1 MUTATED ART1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(252) Variable = RALGAPB MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RALGAPB MUTATED        5      0      3     14
  RALGAPB WILD-TYPE    130     92    169    162
D252V1, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               5               130
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RALGAPB MUTATED       12      4      2
  RALGAPB WILD-TYPE    203    151    160
D252V2, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1              12               203
  CLUS_2               4               151
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RALGAPB MUTATED        5      9      2      1
  RALGAPB WILD-TYPE    130    115    123     59
D252V3, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               5               130
  CLUS_2               9               115
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RALGAPB MUTATED        9      6      2
  RALGAPB WILD-TYPE    244     96     87
D252V4, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               9               244
  CLUS_2               6                96
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RALGAPB MUTATED        5     10      5
  RALGAPB WILD-TYPE    159    237    138
D252V5, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               5               159
  CLUS_2              10               237
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RALGAPB MUTATED        2      3      9      3      3
  RALGAPB WILD-TYPE    119    101     82    118    114
D252V6, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3               9                82
  CLUS_4               3               118
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RALGAPB MUTATED        5     14      3
  RALGAPB WILD-TYPE    154    237    162
D252V7, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               5               154
  CLUS_2              14               237
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RALGAPB MUTATED        2      9      5      3      3
  RALGAPB WILD-TYPE    116    122    146     91     78
D252V8, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               2               116
  CLUS_2               9               122
  CLUS_3               5               146
  CLUS_4               3                91
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RALGAPB MUTATED        3      5      2      3      2
  RALGAPB WILD-TYPE    115    131    113     37     69
D252V9, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               3               115
  CLUS_2               5               131
  CLUS_3               2               113
  CLUS_4               3                37
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RALGAPB MUTATED        3      5      2      2      3
  RALGAPB WILD-TYPE     45    104    128     99     89
D252V10, multiclass
        clus
vv       RALGAPB MUTATED RALGAPB WILD-TYPE
  CLUS_1               3                45
  CLUS_2               5               104
  CLUS_3               2               128
  CLUS_4               2                99
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(253) Variable = CDC14A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC14A MUTATED        2      1      1     13
  CDC14A WILD-TYPE    133     91    171    163
D253V1, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC14A MUTATED       12      0      1
  CDC14A WILD-TYPE    203    155    161
D253V2, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1             12              203
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC14A MUTATED        8      4      0      1
  CDC14A WILD-TYPE    127    120    125     59
D253V3, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              8              127
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC14A MUTATED       12      1      0
  CDC14A WILD-TYPE    241    101     89
D253V4, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1             12              241
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC14A MUTATED        0     13      4
  CDC14A WILD-TYPE    164    234    139
D253V5, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              0              164
  CLUS_2             13              234
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC14A MUTATED        1      1     12      0      3
  CDC14A WILD-TYPE    120    103     79    121    114
D253V6, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3             12               79
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC14A MUTATED        1     14      2
  CDC14A WILD-TYPE    158    237    163
D253V7, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              1              158
  CLUS_2             14              237
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC14A MUTATED        1     10      6      0      0
  CDC14A WILD-TYPE    117    121    145     94     81
D253V8, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              1              117
  CLUS_2             10              121
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC14A MUTATED        1      7      0      0      4
  CDC14A WILD-TYPE    117    129    115     40     67
D253V9, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              129
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC14A MUTATED        1      6      5      0      0
  CDC14A WILD-TYPE     47    103    125    101     92
D253V10, multiclass
        clus
vv       CDC14A MUTATED CDC14A WILD-TYPE
  CLUS_1              1               47
  CLUS_2              6              103
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(254) Variable = RIF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RIF1 MUTATED        1      1      4     20
  RIF1 WILD-TYPE    134     91    168    156
D254V1, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            4            168
  CLUS_4           20            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIF1 MUTATED       16      2      3
  RIF1 WILD-TYPE    199    153    159
D254V2, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1           16            199
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RIF1 MUTATED        8      9      1      2
  RIF1 WILD-TYPE    127    115    124     58
D254V3, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            9            115
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIF1 MUTATED       15      4      1
  RIF1 WILD-TYPE    238     98     88
D254V4, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1           15            238
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIF1 MUTATED        4     15      7
  RIF1 WILD-TYPE    160    232    136
D254V5, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           15            232
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIF1 MUTATED        1      8     11      2      4
  RIF1 WILD-TYPE    120     96     80    119    113
D254V6, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            8             96
  CLUS_3           11             80
  CLUS_4            2            119
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIF1 MUTATED        2     20      4
  RIF1 WILD-TYPE    157    231    161
D254V7, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           20            231
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIF1 MUTATED        2     11     11      1      1
  RIF1 WILD-TYPE    116    120    140     93     80
D254V8, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           11            120
  CLUS_3           11            140
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIF1 MUTATED        1     10      1      1      7
  RIF1 WILD-TYPE    117    126    114     39     64
D254V9, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2           10            126
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIF1 MUTATED        1      6     11      1      1
  RIF1 WILD-TYPE     47    103    119    100     91
D254V10, multiclass
        clus
vv       RIF1 MUTATED RIF1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3           11            119
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(255) Variable = STK38 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK38 MUTATED        1      1      1      5
  STK38 WILD-TYPE    134     91    171    171
D255V1, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK38 MUTATED        4      1      2
  STK38 WILD-TYPE    211    154    160
D255V2, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK38 MUTATED        3      2      1      1
  STK38 WILD-TYPE    132    122    124     59
D255V3, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK38 MUTATED        6      1      0
  STK38 WILD-TYPE    247    101     89
D255V4, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK38 MUTATED        2      5      1
  STK38 WILD-TYPE    162    242    142
D255V5, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK38 MUTATED        0      1      4      1      2
  STK38 WILD-TYPE    121    103     87    120    115
D255V6, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK38 MUTATED        1      5      2
  STK38 WILD-TYPE    158    246    163
D255V7, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK38 MUTATED        0      4      3      1      0
  STK38 WILD-TYPE    118    127    148     93     81
D255V8, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK38 MUTATED        0      3      0      2      2
  STK38 WILD-TYPE    118    133    115     38     69
D255V9, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK38 MUTATED        0      2      4      0      1
  STK38 WILD-TYPE     48    107    126    101     91
D255V10, multiclass
        clus
vv       STK38 MUTATED STK38 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(256) Variable = PAPD4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAPD4 MUTATED        1      0      2     10
  PAPD4 WILD-TYPE    134     92    170    166
D256V1, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAPD4 MUTATED        8      3      1
  PAPD4 WILD-TYPE    207    152    161
D256V2, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAPD4 MUTATED        6      4      0      1
  PAPD4 WILD-TYPE    129    120    125     59
D256V3, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAPD4 MUTATED        7      4      0
  PAPD4 WILD-TYPE    246     98     89
D256V4, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAPD4 MUTATED        4      7      2
  PAPD4 WILD-TYPE    160    240    141
D256V5, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPD4 MUTATED        1      5      4      2      1
  PAPD4 WILD-TYPE    120     99     87    119    116
D256V6, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAPD4 MUTATED        4      8      1
  PAPD4 WILD-TYPE    155    243    164
D256V7, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPD4 MUTATED        1      5      4      2      1
  PAPD4 WILD-TYPE    117    126    147     92     80
D256V8, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPD4 MUTATED        1      3      1      1      4
  PAPD4 WILD-TYPE    117    133    114     39     67
D256V9, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPD4 MUTATED        2      3      3      1      1
  PAPD4 WILD-TYPE     46    106    127    100     91
D256V10, multiclass
        clus
vv       PAPD4 MUTATED PAPD4 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(257) Variable = ABCB4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCB4 MUTATED        3      3      4     19
  ABCB4 WILD-TYPE    132     89    168    157
D257V1, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             4             168
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB4 MUTATED       17      4      4
  ABCB4 WILD-TYPE    198    151    158
D257V2, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1            17             198
  CLUS_2             4             151
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCB4 MUTATED       12     10      3      1
  ABCB4 WILD-TYPE    123    114    122     59
D257V3, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1            12             123
  CLUS_2            10             114
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB4 MUTATED       18      5      3
  ABCB4 WILD-TYPE    235     97     86
D257V4, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1            18             235
  CLUS_2             5              97
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB4 MUTATED        4     16      7
  ABCB4 WILD-TYPE    160    231    136
D257V5, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            16             231
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB4 MUTATED        4      5     12      1      5
  ABCB4 WILD-TYPE    117     99     79    120    112
D257V6, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3            12              79
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB4 MUTATED        2     23      5
  ABCB4 WILD-TYPE    157    228    160
D257V7, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            23             228
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB4 MUTATED        3     12     11      1      3
  ABCB4 WILD-TYPE    115    119    140     93     78
D257V8, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            12             119
  CLUS_3            11             140
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB4 MUTATED        2      9      4      4      5
  ABCB4 WILD-TYPE    116    127    111     36     66
D257V9, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             127
  CLUS_3             4             111
  CLUS_4             4              36
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB4 MUTATED        2     10      8      3      1
  ABCB4 WILD-TYPE     46     99    122     98     91
D257V10, multiclass
        clus
vv       ABCB4 MUTATED ABCB4 WILD-TYPE
  CLUS_1             2              46
  CLUS_2            10              99
  CLUS_3             8             122
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(258) Variable = DIDO1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DIDO1 MUTATED        9      3     14     23
  DIDO1 WILD-TYPE    126     89    158    153
D258V1, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             3              89
  CLUS_3            14             158
  CLUS_4            23             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DIDO1 MUTATED       23     17      4
  DIDO1 WILD-TYPE    192    138    158
D258V2, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1            23             192
  CLUS_2            17             138
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DIDO1 MUTATED       16     10      7      4
  DIDO1 WILD-TYPE    119    114    118     56
D258V3, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1            16             119
  CLUS_2            10             114
  CLUS_3             7             118
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DIDO1 MUTATED       25      7      5
  DIDO1 WILD-TYPE    228     95     84
D258V4, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1            25             228
  CLUS_2             7              95
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DIDO1 MUTATED       13     27      8
  DIDO1 WILD-TYPE    151    220    135
D258V5, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1            13             151
  CLUS_2            27             220
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DIDO1 MUTATED        9      5     20      8      6
  DIDO1 WILD-TYPE    112     99     71    113    111
D258V6, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1             9             112
  CLUS_2             5              99
  CLUS_3            20              71
  CLUS_4             8             113
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DIDO1 MUTATED       13     30      7
  DIDO1 WILD-TYPE    146    221    158
D258V7, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1            13             146
  CLUS_2            30             221
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DIDO1 MUTATED        7     21     13      7      2
  DIDO1 WILD-TYPE    111    110    138     87     79
D258V8, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1             7             111
  CLUS_2            21             110
  CLUS_3            13             138
  CLUS_4             7              87
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DIDO1 MUTATED        9     16      4      4      6
  DIDO1 WILD-TYPE    109    120    111     36     65
D258V9, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1             9             109
  CLUS_2            16             120
  CLUS_3             4             111
  CLUS_4             4              36
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DIDO1 MUTATED        5     15      8      4      7
  DIDO1 WILD-TYPE     43     94    122     97     85
D258V10, multiclass
        clus
vv       DIDO1 MUTATED DIDO1 WILD-TYPE
  CLUS_1             5              43
  CLUS_2            15              94
  CLUS_3             8             122
  CLUS_4             4              97
  CLUS_5             7              85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(259) Variable = ADNP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADNP MUTATED        0      1      3     16
  ADNP WILD-TYPE    135     91    169    160
D259V1, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ADNP MUTATED       11      2      2
  ADNP WILD-TYPE    204    153    160
D259V2, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1           11            204
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADNP MUTATED        8      7      2      3
  ADNP WILD-TYPE    127    117    123     57
D259V3, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            8            127
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ADNP MUTATED       14      4      2
  ADNP WILD-TYPE    239     98     87
D259V4, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1           14            239
  CLUS_2            4             98
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ADNP MUTATED        3     11      5
  ADNP WILD-TYPE    161    236    138
D259V5, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            3            161
  CLUS_2           11            236
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP MUTATED        1      5      7      2      4
  ADNP WILD-TYPE    120     99     84    119    113
D259V6, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            1            120
  CLUS_2            5             99
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ADNP MUTATED        3     13      4
  ADNP WILD-TYPE    156    238    161
D259V7, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            3            156
  CLUS_2           13            238
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP MUTATED        1      7      8      2      2
  ADNP WILD-TYPE    117    124    143     92     79
D259V8, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            1            117
  CLUS_2            7            124
  CLUS_3            8            143
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP MUTATED        2      3      2      1      5
  ADNP WILD-TYPE    116    133    113     39     66
D259V9, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP MUTATED        0      2      8      1      2
  ADNP WILD-TYPE     48    107    122    100     90
D259V10, multiclass
        clus
vv       ADNP MUTATED ADNP WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            8            122
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(260) Variable = AQP8 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AQP8 MUTATED        2      1      1     10
  AQP8 WILD-TYPE    133     91    171    166
D260V1, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AQP8 MUTATED       10      0      2
  AQP8 WILD-TYPE    205    155    160
D260V2, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AQP8 MUTATED        4      6      2      0
  AQP8 WILD-TYPE    131    118    123     60
D260V3, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AQP8 MUTATED        5      5      2
  AQP8 WILD-TYPE    248     97     87
D260V4, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            5             97
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AQP8 MUTATED        1      9      3
  AQP8 WILD-TYPE    163    238    140
D260V5, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            9            238
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AQP8 MUTATED        1      3      7      1      1
  AQP8 WILD-TYPE    120    101     84    120    116
D260V6, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            7             84
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AQP8 MUTATED        0     12      2
  AQP8 WILD-TYPE    159    239    163
D260V7, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           12            239
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AQP8 MUTATED        0      6      5      0      3
  AQP8 WILD-TYPE    118    125    146     94     78
D260V8, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AQP8 MUTATED        0      5      2      0      3
  AQP8 WILD-TYPE    118    131    113     40     68
D260V9, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AQP8 MUTATED        0      3      5      2      0
  AQP8 WILD-TYPE     48    106    125     99     92
D260V10, multiclass
        clus
vv       AQP8 MUTATED AQP8 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            5            125
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(261) Variable = ZC3H13 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H13 MUTATED        7      4      4     25
  ZC3H13 WILD-TYPE    128     88    168    151
D261V1, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              4               88
  CLUS_3              4              168
  CLUS_4             25              151
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H13 MUTATED       25      3      5
  ZC3H13 WILD-TYPE    190    152    157
D261V2, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1             25              190
  CLUS_2              3              152
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H13 MUTATED       12     15      2      2
  ZC3H13 WILD-TYPE    123    109    123     58
D261V3, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1             12              123
  CLUS_2             15              109
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H13 MUTATED       17     12      2
  ZC3H13 WILD-TYPE    236     90     87
D261V4, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1             17              236
  CLUS_2             12               90
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H13 MUTATED        7     24      9
  ZC3H13 WILD-TYPE    157    223    134
D261V5, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              7              157
  CLUS_2             24              223
  CLUS_3              9              134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H13 MUTATED        4     10     17      3      6
  ZC3H13 WILD-TYPE    117     94     74    118    111
D261V6, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              4              117
  CLUS_2             10               94
  CLUS_3             17               74
  CLUS_4              3              118
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H13 MUTATED        6     31      4
  ZC3H13 WILD-TYPE    153    220    161
D261V7, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              6              153
  CLUS_2             31              220
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H13 MUTATED        7     18     11      3      2
  ZC3H13 WILD-TYPE    111    113    140     91     79
D261V8, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              7              111
  CLUS_2             18              113
  CLUS_3             11              140
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H13 MUTATED        2     12      3      5      7
  ZC3H13 WILD-TYPE    116    124    112     35     64
D261V9, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             12              124
  CLUS_3              3              112
  CLUS_4              5               35
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H13 MUTATED        1     11     10      4      3
  ZC3H13 WILD-TYPE     47     98    120     97     89
D261V10, multiclass
        clus
vv       ZC3H13 MUTATED ZC3H13 WILD-TYPE
  CLUS_1              1               47
  CLUS_2             11               98
  CLUS_3             10              120
  CLUS_4              4               97
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(262) Variable = C10ORF76 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        1      2      3      7
  C10ORF76 WILD-TYPE    134     90    169    169
D262V1, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                 90
  CLUS_3                3                169
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        5      3      3
  C10ORF76 WILD-TYPE    210    152    159
D262V2, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                3                152
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C10ORF76 MUTATED        3      2      5      2
  C10ORF76 WILD-TYPE    132    122    120     58
D262V3, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                2                122
  CLUS_3                5                120
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        7      1      4
  C10ORF76 WILD-TYPE    246    101     85
D262V4, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                7                246
  CLUS_2                1                101
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        5      3      5
  C10ORF76 WILD-TYPE    159    244    138
D262V5, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                5                159
  CLUS_2                3                244
  CLUS_3                5                138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C10ORF76 MUTATED        1      2      3      4      3
  C10ORF76 WILD-TYPE    120    102     88    117    114
D262V6, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                3                 88
  CLUS_4                4                117
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C10ORF76 MUTATED        2      4      7
  C10ORF76 WILD-TYPE    157    247    158
D262V7, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                4                247
  CLUS_3                7                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C10ORF76 MUTATED        0      3      4      4      2
  C10ORF76 WILD-TYPE    118    128    147     90     79
D262V8, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                128
  CLUS_3                4                147
  CLUS_4                4                 90
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C10ORF76 MUTATED        1      3      3      1      1
  C10ORF76 WILD-TYPE    117    133    112     39     70
D262V9, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                133
  CLUS_3                3                112
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C10ORF76 MUTATED        0      2      3      0      4
  C10ORF76 WILD-TYPE     48    107    127    101     88
D262V10, multiclass
        clus
vv       C10ORF76 MUTATED C10ORF76 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                4                 88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(263) Variable = SYCP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYCP1 MUTATED        7      0      5     16
  SYCP1 WILD-TYPE    128     92    167    160
D263V1, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             0              92
  CLUS_3             5             167
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYCP1 MUTATED       14      4      7
  SYCP1 WILD-TYPE    201    151    155
D263V2, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             4             151
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYCP1 MUTATED        7     11      1      1
  SYCP1 WILD-TYPE    128    113    124     59
D263V3, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2            11             113
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYCP1 MUTATED       12      7      1
  SYCP1 WILD-TYPE    241     95     88
D263V4, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             7              95
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYCP1 MUTATED        5     17      5
  SYCP1 WILD-TYPE    159    230    138
D263V5, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            17             230
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP1 MUTATED        6      3     10      2      6
  SYCP1 WILD-TYPE    115    101     81    119    111
D263V6, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             6             115
  CLUS_2             3             101
  CLUS_3            10              81
  CLUS_4             2             119
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SYCP1 MUTATED        3     16      9
  SYCP1 WILD-TYPE    156    235    156
D263V7, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            16             235
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP1 MUTATED        5      9      8      2      4
  SYCP1 WILD-TYPE    113    122    143     92     77
D263V8, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             9             122
  CLUS_3             8             143
  CLUS_4             2              92
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP1 MUTATED        2      9      3      1      8
  SYCP1 WILD-TYPE    116    127    112     39     63
D263V9, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             127
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP1 MUTATED        1      5     12      3      2
  SYCP1 WILD-TYPE     47    104    118     98     90
D263V10, multiclass
        clus
vv       SYCP1 MUTATED SYCP1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3            12             118
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(264) Variable = SNRK MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNRK MUTATED        2      2      0     13
  SNRK WILD-TYPE    133     90    172    163
D264V1, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SNRK MUTATED        7      1      6
  SNRK WILD-TYPE    208    154    156
D264V2, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNRK MUTATED        4      4      6      2
  SNRK WILD-TYPE    131    120    119     58
D264V3, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            4            131
  CLUS_2            4            120
  CLUS_3            6            119
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SNRK MUTATED        8      3      5
  SNRK WILD-TYPE    245     99     84
D264V4, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            8            245
  CLUS_2            3             99
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SNRK MUTATED        1      3     11
  SNRK WILD-TYPE    163    244    132
D264V5, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3           11            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRK MUTATED        2      1      4      0      8
  SNRK WILD-TYPE    119    103     87    121    109
D264V6, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            8            109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SNRK MUTATED        1     10      6
  SNRK WILD-TYPE    158    241    159
D264V7, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            1            158
  CLUS_2           10            241
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRK MUTATED        4      4      7      0      2
  SNRK WILD-TYPE    114    127    144     94     79
D264V8, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            4            114
  CLUS_2            4            127
  CLUS_3            7            144
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRK MUTATED        1      2      4      1      5
  SNRK WILD-TYPE    117    134    111     39     66
D264V9, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            4            111
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNRK MUTATED        2      3      4      4      0
  SNRK WILD-TYPE     46    106    126     97     92
D264V10, multiclass
        clus
vv       SNRK MUTATED SNRK WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            4             97
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(265) Variable = EAF2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EAF2 MUTATED        0      2      1      8
  EAF2 WILD-TYPE    135     90    171    168
D265V1, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EAF2 MUTATED        7      1      0
  EAF2 WILD-TYPE    208    154    162
D265V2, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EAF2 MUTATED        2      4      2      1
  EAF2 WILD-TYPE    133    120    123     59
D265V3, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            4            120
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EAF2 MUTATED        6      1      2
  EAF2 WILD-TYPE    247    101     87
D265V4, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EAF2 MUTATED        1      8      2
  EAF2 WILD-TYPE    163    239    141
D265V5, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EAF2 MUTATED        1      4      3      1      2
  EAF2 WILD-TYPE    120    100     88    120    115
D265V6, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            4            100
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EAF2 MUTATED        2      6      3
  EAF2 WILD-TYPE    157    245    162
D265V7, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EAF2 MUTATED        2      4      3      1      1
  EAF2 WILD-TYPE    116    127    148     93     80
D265V8, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EAF2 MUTATED        1      3      2      0      1
  EAF2 WILD-TYPE    117    133    113     40     70
D265V9, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EAF2 MUTATED        0      3      3      0      1
  EAF2 WILD-TYPE     48    106    127    101     91
D265V10, multiclass
        clus
vv       EAF2 MUTATED EAF2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(266) Variable = HSPG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSPG2 MUTATED       13      8     16     37
  HSPG2 WILD-TYPE    122     84    156    139
D266V1, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            13             122
  CLUS_2             8              84
  CLUS_3            16             156
  CLUS_4            37             139
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPG2 MUTATED       38      9     20
  HSPG2 WILD-TYPE    177    146    142
D266V2, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            38             177
  CLUS_2             9             146
  CLUS_3            20             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSPG2 MUTATED       15     19     12      8
  HSPG2 WILD-TYPE    120    105    113     52
D266V3, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            15             120
  CLUS_2            19             105
  CLUS_3            12             113
  CLUS_4             8              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPG2 MUTATED       35     13      6
  HSPG2 WILD-TYPE    218     89     83
D266V4, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            35             218
  CLUS_2            13              89
  CLUS_3             6              83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPG2 MUTATED        7     44     22
  HSPG2 WILD-TYPE    157    203    121
D266V5, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            44             203
  CLUS_3            22             121
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPG2 MUTATED       13     18     20      5     17
  HSPG2 WILD-TYPE    108     86     71    116    100
D266V6, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            13             108
  CLUS_2            18              86
  CLUS_3            20              71
  CLUS_4             5             116
  CLUS_5            17             100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPG2 MUTATED       12     43     20
  HSPG2 WILD-TYPE    147    208    145
D266V7, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            12             147
  CLUS_2            43             208
  CLUS_3            20             145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPG2 MUTATED       16     26     22      4      7
  HSPG2 WILD-TYPE    102    105    129     90     74
D266V8, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1            16             102
  CLUS_2            26             105
  CLUS_3            22             129
  CLUS_4             4              90
  CLUS_5             7              74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPG2 MUTATED        5     19     14      6     11
  HSPG2 WILD-TYPE    113    117    101     34     60
D266V9, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            19             117
  CLUS_3            14             101
  CLUS_4             6              34
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPG2 MUTATED        4     15     20     12      4
  HSPG2 WILD-TYPE     44     94    110     89     88
D266V10, multiclass
        clus
vv       HSPG2 MUTATED HSPG2 WILD-TYPE
  CLUS_1             4              44
  CLUS_2            15              94
  CLUS_3            20             110
  CLUS_4            12              89
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(267) Variable = TP53BP1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53BP1 MUTATED        2      3      3     19
  TP53BP1 WILD-TYPE    133     89    169    157
D267V1, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3                89
  CLUS_3               3               169
  CLUS_4              19               157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP1 MUTATED       14      4      5
  TP53BP1 WILD-TYPE    201    151    157
D267V2, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1              14               201
  CLUS_2               4               151
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TP53BP1 MUTATED        6     10      2      3
  TP53BP1 WILD-TYPE    129    114    123     57
D267V3, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               6               129
  CLUS_2              10               114
  CLUS_3               2               123
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP1 MUTATED       13      6      2
  TP53BP1 WILD-TYPE    240     96     87
D267V4, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1              13               240
  CLUS_2               6                96
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP1 MUTATED        4     17      4
  TP53BP1 WILD-TYPE    160    230    139
D267V5, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               4               160
  CLUS_2              17               230
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP1 MUTATED        2      8      8      2      5
  TP53BP1 WILD-TYPE    119     96     83    119    112
D267V6, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               8                96
  CLUS_3               8                83
  CLUS_4               2               119
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TP53BP1 MUTATED        2     21      4
  TP53BP1 WILD-TYPE    157    230    161
D267V7, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              21               230
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP1 MUTATED        1     13     10      2      1
  TP53BP1 WILD-TYPE    117    118    141     92     80
D267V8, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2              13               118
  CLUS_3              10               141
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP1 MUTATED        3     10      1      0      5
  TP53BP1 WILD-TYPE    115    126    114     40     66
D267V9, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              10               126
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TP53BP1 MUTATED        0     11      5      1      2
  TP53BP1 WILD-TYPE     48     98    125    100     90
D267V10, multiclass
        clus
vv       TP53BP1 MUTATED TP53BP1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2              11                98
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(268) Variable = KLC2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLC2 MUTATED        1      1      3     11
  KLC2 WILD-TYPE    134     91    169    165
D268V1, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLC2 MUTATED        6      4      4
  KLC2 WILD-TYPE    209    151    158
D268V2, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            4            151
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLC2 MUTATED        2      6      3      1
  KLC2 WILD-TYPE    133    118    122     59
D268V3, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            6            118
  CLUS_3            3            122
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLC2 MUTATED        4      5      3
  KLC2 WILD-TYPE    249     97     86
D268V4, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            5             97
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLC2 MUTATED        3      7      3
  KLC2 WILD-TYPE    161    240    140
D268V5, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLC2 MUTATED        2      2      5      2      2
  KLC2 WILD-TYPE    119    102     86    119    115
D268V6, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KLC2 MUTATED        2     10      4
  KLC2 WILD-TYPE    157    241    161
D268V7, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           10            241
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLC2 MUTATED        1      3      8      2      2
  KLC2 WILD-TYPE    117    128    143     92     79
D268V8, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            8            143
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLC2 MUTATED        1      5      2      0      4
  KLC2 WILD-TYPE    117    131    113     40     67
D268V9, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLC2 MUTATED        0      3      6      1      2
  KLC2 WILD-TYPE     48    106    124    100     90
D268V10, multiclass
        clus
vv       KLC2 MUTATED KLC2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(269) Variable = SRCIN1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRCIN1 MUTATED        2      4      5      7
  SRCIN1 WILD-TYPE    133     88    167    169
D269V1, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              5              167
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SRCIN1 MUTATED        8      2      5
  SRCIN1 WILD-TYPE    207    153    157
D269V2, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              2              153
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRCIN1 MUTATED        5      7      1      1
  SRCIN1 WILD-TYPE    130    117    124     59
D269V3, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SRCIN1 MUTATED        8      4      2
  SRCIN1 WILD-TYPE    245     98     87
D269V4, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SRCIN1 MUTATED        4     10      3
  SRCIN1 WILD-TYPE    160    237    140
D269V5, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             10              237
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRCIN1 MUTATED        2      3      7      2      3
  SRCIN1 WILD-TYPE    119    101     84    119    114
D269V6, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SRCIN1 MUTATED        3     11      4
  SRCIN1 WILD-TYPE    156    240    161
D269V7, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             11              240
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRCIN1 MUTATED        3      8      4      1      2
  SRCIN1 WILD-TYPE    115    123    147     93     79
D269V8, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRCIN1 MUTATED        3      4      3      1      4
  SRCIN1 WILD-TYPE    115    132    112     39     67
D269V9, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRCIN1 MUTATED        0      7      5      2      1
  SRCIN1 WILD-TYPE     48    102    125     99     91
D269V10, multiclass
        clus
vv       SRCIN1 MUTATED SRCIN1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              7              102
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(270) Variable = FAM98C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM98C MUTATED        1      1      0      8
  FAM98C WILD-TYPE    134     91    172    168
D270V1, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM98C MUTATED        5      1      1
  FAM98C WILD-TYPE    210    154    161
D270V2, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM98C MUTATED        3      3      2      0
  FAM98C WILD-TYPE    132    121    123     60
D270V3, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM98C MUTATED        4      2      2
  FAM98C WILD-TYPE    249    100     87
D270V4, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM98C MUTATED        3      3      4
  FAM98C WILD-TYPE    161    244    139
D270V5, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              3              161
  CLUS_2              3              244
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM98C MUTATED        1      1      6      0      2
  FAM98C WILD-TYPE    120    103     85    121    115
D270V6, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              6               85
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM98C MUTATED        1      6      3
  FAM98C WILD-TYPE    158    245    162
D270V7, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM98C MUTATED        1      4      4      0      1
  FAM98C WILD-TYPE    117    127    147     94     80
D270V8, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              127
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM98C MUTATED        0      2      2      1      2
  FAM98C WILD-TYPE    118    134    113     39     69
D270V9, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM98C MUTATED        2      1      4      0      0
  FAM98C WILD-TYPE     46    108    126    101     92
D270V10, multiclass
        clus
vv       FAM98C MUTATED FAM98C WILD-TYPE
  CLUS_1              2               46
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(271) Variable = PDCD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDCD1 MUTATED        0      0      0      5
  PDCD1 WILD-TYPE    135     92    172    171
D271V1, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDCD1 MUTATED        5      0      0
  PDCD1 WILD-TYPE    210    155    162
D271V2, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDCD1 MUTATED        1      1      1      0
  PDCD1 WILD-TYPE    134    123    124     60
D271V3, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDCD1 MUTATED        1      1      1
  PDCD1 WILD-TYPE    252    101     88
D271V4, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             1             252
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDCD1 MUTATED        0      4      2
  PDCD1 WILD-TYPE    164    243    141
D271V5, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDCD1 MUTATED        1      0      4      0      1
  PDCD1 WILD-TYPE    120    104     87    121    116
D271V6, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDCD1 MUTATED        0      5      1
  PDCD1 WILD-TYPE    159    246    164
D271V7, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDCD1 MUTATED        0      4      1      0      1
  PDCD1 WILD-TYPE    118    127    150     94     80
D271V8, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDCD1 MUTATED        0      3      1      1      0
  PDCD1 WILD-TYPE    118    133    114     39     71
D271V9, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDCD1 MUTATED        0      3      2      0      0
  PDCD1 WILD-TYPE     48    106    128    101     92
D271V10, multiclass
        clus
vv       PDCD1 MUTATED PDCD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(272) Variable = TMC4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMC4 MUTATED        0      4      4     12
  TMC4 WILD-TYPE    135     88    168    164
D272V1, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            4             88
  CLUS_3            4            168
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC4 MUTATED        9      3      7
  TMC4 WILD-TYPE    206    152    155
D272V2, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            7            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMC4 MUTATED        3      4      7      3
  TMC4 WILD-TYPE    132    120    118     57
D272V3, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4            120
  CLUS_3            7            118
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC4 MUTATED        8      3      6
  TMC4 WILD-TYPE    245     99     83
D272V4, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            3             99
  CLUS_3            6             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC4 MUTATED        3      6      8
  TMC4 WILD-TYPE    161    241    135
D272V5, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            6            241
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC4 MUTATED        2      5      2      2      6
  TMC4 WILD-TYPE    119     99     89    119    111
D272V6, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            5             99
  CLUS_3            2             89
  CLUS_4            2            119
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC4 MUTATED        3      9      8
  TMC4 WILD-TYPE    156    242    157
D272V7, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            8            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC4 MUTATED        4      4      7      2      3
  TMC4 WILD-TYPE    114    127    144     92     78
D272V8, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            4            127
  CLUS_3            7            144
  CLUS_4            2             92
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC4 MUTATED        2      4      5      2      4
  TMC4 WILD-TYPE    116    132    110     38     67
D272V9, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            5            110
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC4 MUTATED        2      3      5      5      2
  TMC4 WILD-TYPE     46    106    125     96     90
D272V10, multiclass
        clus
vv       TMC4 MUTATED TMC4 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            5            125
  CLUS_4            5             96
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(273) Variable = ACP1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACP1 MUTATED        0      0      0      9
  ACP1 WILD-TYPE    135     92    172    167
D273V1, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ACP1 MUTATED        6      0      0
  ACP1 WILD-TYPE    209    155    162
D273V2, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACP1 MUTATED        3      3      0      0
  ACP1 WILD-TYPE    132    121    125     60
D273V3, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ACP1 MUTATED        5      0      1
  ACP1 WILD-TYPE    248    102     88
D273V4, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ACP1 MUTATED        0      6      2
  ACP1 WILD-TYPE    164    241    141
D273V5, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            6            241
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACP1 MUTATED        0      3      4      0      1
  ACP1 WILD-TYPE    121    101     87    121    116
D273V6, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ACP1 MUTATED        1      7      1
  ACP1 WILD-TYPE    158    244    164
D273V7, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            7            244
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACP1 MUTATED        2      4      3      0      0
  ACP1 WILD-TYPE    116    127    148     94     81
D273V8, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACP1 MUTATED        0      4      1      0      0
  ACP1 WILD-TYPE    118    132    114     40     71
D273V9, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACP1 MUTATED        0      2      2      1      0
  ACP1 WILD-TYPE     48    107    128    100     92
D273V10, multiclass
        clus
vv       ACP1 MUTATED ACP1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(274) Variable = PLOD3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLOD3 MUTATED        5      1      1     13
  PLOD3 WILD-TYPE    130     91    171    163
D274V1, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLOD3 MUTATED       11      3      3
  PLOD3 WILD-TYPE    204    152    159
D274V2, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLOD3 MUTATED        7      6      3      1
  PLOD3 WILD-TYPE    128    118    122     59
D274V3, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLOD3 MUTATED       10      5      2
  PLOD3 WILD-TYPE    243     97     87
D274V4, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLOD3 MUTATED        4     13      3
  PLOD3 WILD-TYPE    160    234    140
D274V5, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            13             234
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLOD3 MUTATED        2      5      9      1      3
  PLOD3 WILD-TYPE    119     99     82    120    114
D274V6, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             5              99
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLOD3 MUTATED        3     11      6
  PLOD3 WILD-TYPE    156    240    159
D274V7, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            11             240
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLOD3 MUTATED        4      8      6      1      1
  PLOD3 WILD-TYPE    114    123    145     93     80
D274V8, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             123
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLOD3 MUTATED        2      8      2      0      4
  PLOD3 WILD-TYPE    116    128    113     40     67
D274V9, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLOD3 MUTATED        0      9      4      2      1
  PLOD3 WILD-TYPE     48    100    126     99     91
D274V10, multiclass
        clus
vv       PLOD3 MUTATED PLOD3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             9             100
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(275) Variable = TMEM41B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM41B MUTATED        0      0      1      5
  TMEM41B WILD-TYPE    135     92    171    171
D275V1, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41B MUTATED        3      1      0
  TMEM41B WILD-TYPE    212    154    162
D275V2, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               3               212
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM41B MUTATED        1      4      0      0
  TMEM41B WILD-TYPE    134    120    125     60
D275V3, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41B MUTATED        3      2      0
  TMEM41B WILD-TYPE    250    100     89
D275V4, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               3               250
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41B MUTATED        1      3      1
  TMEM41B WILD-TYPE    163    244    142
D275V5, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               1               163
  CLUS_2               3               244
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41B MUTATED        0      1      2      1      1
  TMEM41B WILD-TYPE    121    103     89    120    116
D275V6, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM41B MUTATED        1      4      1
  TMEM41B WILD-TYPE    158    247    164
D275V7, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               1               158
  CLUS_2               4               247
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41B MUTATED        1      2      2      1      0
  TMEM41B WILD-TYPE    117    129    149     93     81
D275V8, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               129
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41B MUTATED        1      1      1      0      1
  TMEM41B WILD-TYPE    117    135    114     40     70
D275V9, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM41B MUTATED        0      2      0      1      1
  TMEM41B WILD-TYPE     48    107    130    100     91
D275V10, multiclass
        clus
vv       TMEM41B MUTATED TMEM41B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(276) Variable = ATP2B4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP2B4 MUTATED        4      2      4     12
  ATP2B4 WILD-TYPE    131     90    168    164
D276V1, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B4 MUTATED       13      2      6
  ATP2B4 WILD-TYPE    202    153    156
D276V2, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1             13              202
  CLUS_2              2              153
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP2B4 MUTATED        6     10      2      0
  ATP2B4 WILD-TYPE    129    114    123     60
D276V3, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              6              129
  CLUS_2             10              114
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B4 MUTATED       10      6      2
  ATP2B4 WILD-TYPE    243     96     87
D276V4, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              6               96
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B4 MUTATED        4     11      6
  ATP2B4 WILD-TYPE    160    236    137
D276V5, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             11              236
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B4 MUTATED        2      4      9      3      3
  ATP2B4 WILD-TYPE    119    100     82    118    114
D276V6, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3              9               82
  CLUS_4              3              118
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B4 MUTATED        1     14      6
  ATP2B4 WILD-TYPE    158    237    159
D276V7, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             14              237
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B4 MUTATED        2      6      8      3      2
  ATP2B4 WILD-TYPE    116    125    143     91     79
D276V8, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              125
  CLUS_3              8              143
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B4 MUTATED        1      6      5      2      6
  ATP2B4 WILD-TYPE    117    130    110     38     65
D276V9, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              5              110
  CLUS_4              2               38
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B4 MUTATED        0      7      6      4      3
  ATP2B4 WILD-TYPE     48    102    124     97     89
D276V10, multiclass
        clus
vv       ATP2B4 MUTATED ATP2B4 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              7              102
  CLUS_3              6              124
  CLUS_4              4               97
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(277) Variable = LRRN2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRRN2 MUTATED        5      5      9     16
  LRRN2 WILD-TYPE    130     87    163    160
D277V1, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5              87
  CLUS_3             9             163
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRN2 MUTATED       20      2     12
  LRRN2 WILD-TYPE    195    153    150
D277V2, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1            20             195
  CLUS_2             2             153
  CLUS_3            12             150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRRN2 MUTATED        5     10     11      3
  LRRN2 WILD-TYPE    130    114    114     57
D277V3, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2            10             114
  CLUS_3            11             114
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRN2 MUTATED       14      8      7
  LRRN2 WILD-TYPE    239     94     82
D277V4, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             8              94
  CLUS_3             7              82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRN2 MUTATED        2     16     16
  LRRN2 WILD-TYPE    162    231    127
D277V5, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            16             231
  CLUS_3            16             127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRN2 MUTATED        5      7      9      1     12
  LRRN2 WILD-TYPE    116     97     82    120    105
D277V6, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             7              97
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5            12             105
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRN2 MUTATED        5     17     13
  LRRN2 WILD-TYPE    154    234    152
D277V7, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            17             234
  CLUS_3            13             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRN2 MUTATED        6      7     12      1      9
  LRRN2 WILD-TYPE    112    124    139     93     72
D277V8, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             6             112
  CLUS_2             7             124
  CLUS_3            12             139
  CLUS_4             1              93
  CLUS_5             9              72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRN2 MUTATED        2      7      9      3      7
  LRRN2 WILD-TYPE    116    129    106     37     64
D277V9, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             129
  CLUS_3             9             106
  CLUS_4             3              37
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRN2 MUTATED        0      5     12     10      1
  LRRN2 WILD-TYPE     48    104    118     91     91
D277V10, multiclass
        clus
vv       LRRN2 MUTATED LRRN2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3            12             118
  CLUS_4            10              91
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(278) Variable = OBSCN MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OBSCN MUTATED       14     15     28     56
  OBSCN WILD-TYPE    121     77    144    120
D278V1, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            14             121
  CLUS_2            15              77
  CLUS_3            28             144
  CLUS_4            56             120
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OBSCN MUTATED       55     21     29
  OBSCN WILD-TYPE    160    134    133
D278V2, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            55             160
  CLUS_2            21             134
  CLUS_3            29             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OBSCN MUTATED       25     34     13      8
  OBSCN WILD-TYPE    110     90    112     52
D278V3, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            25             110
  CLUS_2            34              90
  CLUS_3            13             112
  CLUS_4             8              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OBSCN MUTATED       48     21     11
  OBSCN WILD-TYPE    205     81     78
D278V4, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            48             205
  CLUS_2            21              81
  CLUS_3            11              78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OBSCN MUTATED       25     51     31
  OBSCN WILD-TYPE    139    196    112
D278V5, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            25             139
  CLUS_2            51             196
  CLUS_3            31             112
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OBSCN MUTATED       17     21     29     17     23
  OBSCN WILD-TYPE    104     83     62    104     94
D278V6, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            17             104
  CLUS_2            21              83
  CLUS_3            29              62
  CLUS_4            17             104
  CLUS_5            23              94
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OBSCN MUTATED       23     61     30
  OBSCN WILD-TYPE    136    190    135
D278V7, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            23             136
  CLUS_2            61             190
  CLUS_3            30             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OBSCN MUTATED       23     33     36     13      9
  OBSCN WILD-TYPE     95     98    115     81     72
D278V8, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            23              95
  CLUS_2            33              98
  CLUS_3            36             115
  CLUS_4            13              81
  CLUS_5             9              72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OBSCN MUTATED       15     34     22      6     14
  OBSCN WILD-TYPE    103    102     93     34     57
D278V9, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1            15             103
  CLUS_2            34             102
  CLUS_3            22              93
  CLUS_4             6              34
  CLUS_5            14              57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OBSCN MUTATED        6     27     28     18     12
  OBSCN WILD-TYPE     42     82    102     83     80
D278V10, multiclass
        clus
vv       OBSCN MUTATED OBSCN WILD-TYPE
  CLUS_1             6              42
  CLUS_2            27              82
  CLUS_3            28             102
  CLUS_4            18              83
  CLUS_5            12              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(279) Variable = KIDINS220 MUTATION ANALYSIS
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIDINS220 MUTATED        2      6      5     15
  KIDINS220 WILD-TYPE    133     86    167    161
D279V1, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 2                 133
  CLUS_2                 6                  86
  CLUS_3                 5                 167
  CLUS_4                15                 161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KIDINS220 MUTATED       13      7      3
  KIDINS220 WILD-TYPE    202    148    159
D279V2, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                13                 202
  CLUS_2                 7                 148
  CLUS_3                 3                 159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIDINS220 MUTATED        7      9      1      3
  KIDINS220 WILD-TYPE    128    115    124     57
D279V3, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 7                 128
  CLUS_2                 9                 115
  CLUS_3                 1                 124
  CLUS_4                 3                  57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KIDINS220 MUTATED       14      6      0
  KIDINS220 WILD-TYPE    239     96     89
D279V4, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                14                 239
  CLUS_2                 6                  96
  CLUS_3                 0                  89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KIDINS220 MUTATED        7     17      3
  KIDINS220 WILD-TYPE    157    230    140
D279V5, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 7                 157
  CLUS_2                17                 230
  CLUS_3                 3                 140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIDINS220 MUTATED        3      7     10      5      2
  KIDINS220 WILD-TYPE    118     97     81    116    115
D279V6, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 3                 118
  CLUS_2                 7                  97
  CLUS_3                10                  81
  CLUS_4                 5                 116
  CLUS_5                 2                 115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KIDINS220 MUTATED        8     16      4
  KIDINS220 WILD-TYPE    151    235    161
D279V7, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 8                 151
  CLUS_2                16                 235
  CLUS_3                 4                 161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIDINS220 MUTATED        6      9      8      5      0
  KIDINS220 WILD-TYPE    112    122    143     89     81
D279V8, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 6                 112
  CLUS_2                 9                 122
  CLUS_3                 8                 143
  CLUS_4                 5                  89
  CLUS_5                 0                  81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIDINS220 MUTATED        5      9      2      2      3
  KIDINS220 WILD-TYPE    113    127    113     38     68
D279V9, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 5                 113
  CLUS_2                 9                 127
  CLUS_3                 2                 113
  CLUS_4                 2                  38
  CLUS_5                 3                  68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIDINS220 MUTATED        1     10      5      0      5
  KIDINS220 WILD-TYPE     47     99    125    101     87
D279V10, multiclass
        clus
vv       KIDINS220 MUTATED KIDINS220 WILD-TYPE
  CLUS_1                 1                  47
  CLUS_2                10                  99
  CLUS_3                 5                 125
  CLUS_4                 0                 101
  CLUS_5                 5                  87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(280) Variable = NID2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NID2 MUTATED        1      2      2     17
  NID2 WILD-TYPE    134     90    170    159
D280V1, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NID2 MUTATED        9      3      5
  NID2 WILD-TYPE    206    152    157
D280V2, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NID2 MUTATED       11      6      2      1
  NID2 WILD-TYPE    124    118    123     59
D280V3, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1           11            124
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NID2 MUTATED       15      3      2
  NID2 WILD-TYPE    238     99     87
D280V4, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1           15            238
  CLUS_2            3             99
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NID2 MUTATED        2     13      5
  NID2 WILD-TYPE    162    234    138
D280V5, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2           13            234
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NID2 MUTATED        1      7      5      2      5
  NID2 WILD-TYPE    120     97     86    119    112
D280V6, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            7             97
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NID2 MUTATED        1     17      4
  NID2 WILD-TYPE    158    234    161
D280V7, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           17            234
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NID2 MUTATED        0      7     12      1      2
  NID2 WILD-TYPE    118    124    139     93     79
D280V8, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            7            124
  CLUS_3           12            139
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NID2 MUTATED        1      8      1      0      5
  NID2 WILD-TYPE    117    128    114     40     66
D280V9, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            128
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NID2 MUTATED        0      6      7      1      1
  NID2 WILD-TYPE     48    103    123    100     91
D280V10, multiclass
        clus
vv       NID2 MUTATED NID2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(281) Variable = KIRREL MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIRREL MUTATED        3      5      5     11
  KIRREL WILD-TYPE    132     87    167    165
D281V1, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              3              132
  CLUS_2              5               87
  CLUS_3              5              167
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIRREL MUTATED       13      4      5
  KIRREL WILD-TYPE    202    151    157
D281V2, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1             13              202
  CLUS_2              4              151
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIRREL MUTATED        6      7      5      0
  KIRREL WILD-TYPE    129    117    120     60
D281V3, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              6              129
  CLUS_2              7              117
  CLUS_3              5              120
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIRREL MUTATED       10      3      5
  KIRREL WILD-TYPE    243     99     84
D281V4, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1             10              243
  CLUS_2              3               99
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIRREL MUTATED        5     14      4
  KIRREL WILD-TYPE    159    233    139
D281V5, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              5              159
  CLUS_2             14              233
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL MUTATED        8      6      4      2      3
  KIRREL WILD-TYPE    113     98     87    119    114
D281V6, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              8              113
  CLUS_2              6               98
  CLUS_3              4               87
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIRREL MUTATED        5     12      7
  KIRREL WILD-TYPE    154    239    158
D281V7, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              5              154
  CLUS_2             12              239
  CLUS_3              7              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL MUTATED        4      8      5      3      4
  KIRREL WILD-TYPE    114    123    146     91     77
D281V8, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              4              114
  CLUS_2              8              123
  CLUS_3              5              146
  CLUS_4              3               91
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL MUTATED        5      9      4      1      2
  KIRREL WILD-TYPE    113    127    111     39     69
D281V9, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              5              113
  CLUS_2              9              127
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL MUTATED        0      9      5      4      3
  KIRREL WILD-TYPE     48    100    125     97     89
D281V10, multiclass
        clus
vv       KIRREL MUTATED KIRREL WILD-TYPE
  CLUS_1              0               48
  CLUS_2              9              100
  CLUS_3              5              125
  CLUS_4              4               97
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(282) Variable = PTCH1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTCH1 MUTATED        3      3      9     19
  PTCH1 WILD-TYPE    132     89    163    157
D282V1, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             9             163
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTCH1 MUTATED       20      9      5
  PTCH1 WILD-TYPE    195    146    157
D282V2, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1            20             195
  CLUS_2             9             146
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTCH1 MUTATED        6     11      3      5
  PTCH1 WILD-TYPE    129    113    122     55
D282V3, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            11             113
  CLUS_3             3             122
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTCH1 MUTATED       17      4      4
  PTCH1 WILD-TYPE    236     98     85
D282V4, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1            17             236
  CLUS_2             4              98
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTCH1 MUTATED       10     13     10
  PTCH1 WILD-TYPE    154    234    133
D282V5, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1            10             154
  CLUS_2            13             234
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCH1 MUTATED        1      2     13      9      8
  PTCH1 WILD-TYPE    120    102     78    112    109
D282V6, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3            13              78
  CLUS_4             9             112
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTCH1 MUTATED       10     19      6
  PTCH1 WILD-TYPE    149    232    159
D282V7, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1            10             149
  CLUS_2            19             232
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCH1 MUTATED        2      9     11      9      4
  PTCH1 WILD-TYPE    116    122    140     85     77
D282V8, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             122
  CLUS_3            11             140
  CLUS_4             9              85
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCH1 MUTATED        8      8      5      1     11
  PTCH1 WILD-TYPE    110    128    110     39     60
D282V9, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1             8             110
  CLUS_2             8             128
  CLUS_3             5             110
  CLUS_4             1              39
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCH1 MUTATED        1      7     14      2      9
  PTCH1 WILD-TYPE     47    102    116     99     83
D282V10, multiclass
        clus
vv       PTCH1 MUTATED PTCH1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3            14             116
  CLUS_4             2              99
  CLUS_5             9              83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(283) Variable = NUP35 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP35 MUTATED        0      0      3      4
  NUP35 WILD-TYPE    135     92    169    172
D283V1, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUP35 MUTATED        3      2      1
  NUP35 WILD-TYPE    212    153    161
D283V2, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUP35 MUTATED        2      1      1      0
  NUP35 WILD-TYPE    133    123    124     60
D283V3, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUP35 MUTATED        2      1      1
  NUP35 WILD-TYPE    251    101     88
D283V4, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUP35 MUTATED        2      3      2
  NUP35 WILD-TYPE    162    244    141
D283V5, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUP35 MUTATED        1      2      2      1      1
  NUP35 WILD-TYPE    120    102     89    120    116
D283V6, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUP35 MUTATED        1      4      2
  NUP35 WILD-TYPE    158    247    163
D283V7, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUP35 MUTATED        2      2      2      1      0
  NUP35 WILD-TYPE    116    129    149     93     81
D283V8, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUP35 MUTATED        1      2      1      0      2
  NUP35 WILD-TYPE    117    134    114     40     69
D283V9, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUP35 MUTATED        0      1      3      1      1
  NUP35 WILD-TYPE     48    108    127    100     91
D283V10, multiclass
        clus
vv       NUP35 MUTATED NUP35 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(284) Variable = ZC3H18 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H18 MUTATED        4      0      5     15
  ZC3H18 WILD-TYPE    131     92    167    161
D284V1, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              0               92
  CLUS_3              5              167
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H18 MUTATED       13      3      4
  ZC3H18 WILD-TYPE    202    152    158
D284V2, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1             13              202
  CLUS_2              3              152
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H18 MUTATED        4     10      1      1
  ZC3H18 WILD-TYPE    131    114    124     59
D284V3, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              4              131
  CLUS_2             10              114
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H18 MUTATED        9      6      1
  ZC3H18 WILD-TYPE    244     96     88
D284V4, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              6               96
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H18 MUTATED        2     16      5
  ZC3H18 WILD-TYPE    162    231    138
D284V5, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             16              231
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H18 MUTATED        6      4      9      1      3
  ZC3H18 WILD-TYPE    115    100     82    120    114
D284V6, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              4              100
  CLUS_3              9               82
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZC3H18 MUTATED        2     18      5
  ZC3H18 WILD-TYPE    157    233    160
D284V7, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             18              233
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H18 MUTATED        4      9     10      1      1
  ZC3H18 WILD-TYPE    114    122    141     93     80
D284V8, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              9              122
  CLUS_3             10              141
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H18 MUTATED        1      8      3      2      5
  ZC3H18 WILD-TYPE    117    128    112     38     66
D284V9, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              128
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H18 MUTATED        2      9      5      2      1
  ZC3H18 WILD-TYPE     46    100    125     99     91
D284V10, multiclass
        clus
vv       ZC3H18 MUTATED ZC3H18 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              9              100
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(285) Variable = GLYR1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYR1 MUTATED        0      3      1     13
  GLYR1 WILD-TYPE    135     89    171    163
D285V1, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3              89
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYR1 MUTATED       11      1      2
  GLYR1 WILD-TYPE    204    154    160
D285V2, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYR1 MUTATED        5      9      0      0
  GLYR1 WILD-TYPE    130    115    125     60
D285V3, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             9             115
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYR1 MUTATED        7      6      1
  GLYR1 WILD-TYPE    246     96     88
D285V4, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYR1 MUTATED        1     11      4
  GLYR1 WILD-TYPE    163    236    139
D285V5, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYR1 MUTATED        1      3      8      1      3
  GLYR1 WILD-TYPE    120    101     83    120    114
D285V6, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GLYR1 MUTATED        3     12      2
  GLYR1 WILD-TYPE    156    239    163
D285V7, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYR1 MUTATED        3      7      6      1      0
  GLYR1 WILD-TYPE    115    124    145     93     81
D285V8, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYR1 MUTATED        2      7      1      0      2
  GLYR1 WILD-TYPE    116    129    114     40     69
D285V9, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             129
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYR1 MUTATED        0      5      5      1      1
  GLYR1 WILD-TYPE     48    104    125    100     91
D285V10, multiclass
        clus
vv       GLYR1 MUTATED GLYR1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(286) Variable = FRYL MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FRYL MUTATED        6      2      7     20
  FRYL WILD-TYPE    129     90    165    156
D286V1, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            6            129
  CLUS_2            2             90
  CLUS_3            7            165
  CLUS_4           20            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FRYL MUTATED       12      7      9
  FRYL WILD-TYPE    203    148    153
D286V2, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1           12            203
  CLUS_2            7            148
  CLUS_3            9            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FRYL MUTATED       11     10      4      3
  FRYL WILD-TYPE    124    114    121     57
D286V3, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1           11            124
  CLUS_2           10            114
  CLUS_3            4            121
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FRYL MUTATED       19      6      3
  FRYL WILD-TYPE    234     96     86
D286V4, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1           19            234
  CLUS_2            6             96
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FRYL MUTATED        9     14      9
  FRYL WILD-TYPE    155    233    134
D286V5, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            9            155
  CLUS_2           14            233
  CLUS_3            9            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRYL MUTATED        2      7     10      7      6
  FRYL WILD-TYPE    119     97     81    114    111
D286V6, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            2            119
  CLUS_2            7             97
  CLUS_3           10             81
  CLUS_4            7            114
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FRYL MUTATED        7     18     10
  FRYL WILD-TYPE    152    233    155
D286V7, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            7            152
  CLUS_2           18            233
  CLUS_3           10            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRYL MUTATED        7      8     11      7      2
  FRYL WILD-TYPE    111    123    140     87     79
D286V8, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            7            111
  CLUS_2            8            123
  CLUS_3           11            140
  CLUS_4            7             87
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRYL MUTATED        7      7      5      2      6
  FRYL WILD-TYPE    111    129    110     38     65
D286V9, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            7            111
  CLUS_2            7            129
  CLUS_3            5            110
  CLUS_4            2             38
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FRYL MUTATED        3      6      8      3      7
  FRYL WILD-TYPE     45    103    122     98     85
D286V10, multiclass
        clus
vv       FRYL MUTATED FRYL WILD-TYPE
  CLUS_1            3             45
  CLUS_2            6            103
  CLUS_3            8            122
  CLUS_4            3             98
  CLUS_5            7             85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(287) Variable = CNBD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNBD1 MUTATED        9      6      2      5
  CNBD1 WILD-TYPE    126     86    170    171
D287V1, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             6              86
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNBD1 MUTATED       11      8      0
  CNBD1 WILD-TYPE    204    147    162
D287V2, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             8             147
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNBD1 MUTATED        8      6      3      1
  CNBD1 WILD-TYPE    127    118    122     59
D287V3, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNBD1 MUTATED       13      2      3
  CNBD1 WILD-TYPE    240    100     86
D287V4, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             2             100
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNBD1 MUTATED        6     12      4
  CNBD1 WILD-TYPE    158    235    139
D287V5, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            12             235
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNBD1 MUTATED       13      2      4      1      2
  CNBD1 WILD-TYPE    108    102     87    120    115
D287V6, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1            13             108
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNBD1 MUTATED        8     11      3
  CNBD1 WILD-TYPE    151    240    162
D287V7, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1             8             151
  CLUS_2            11             240
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNBD1 MUTATED       10      6      4      0      2
  CNBD1 WILD-TYPE    108    125    147     94     79
D287V8, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1            10             108
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNBD1 MUTATED        4      7      3      2      2
  CNBD1 WILD-TYPE    114    129    112     38     69
D287V9, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             129
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNBD1 MUTATED        2      7      7      2      0
  CNBD1 WILD-TYPE     46    102    123     99     92
D287V10, multiclass
        clus
vv       CNBD1 MUTATED CNBD1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3             7             123
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(288) Variable = PANK1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PANK1 MUTATED        1      2      1      9
  PANK1 WILD-TYPE    134     90    171    167
D288V1, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PANK1 MUTATED        7      1      3
  PANK1 WILD-TYPE    208    154    159
D288V2, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PANK1 MUTATED        4      4      1      1
  PANK1 WILD-TYPE    131    120    124     59
D288V3, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PANK1 MUTATED        5      3      2
  PANK1 WILD-TYPE    248     99     87
D288V4, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PANK1 MUTATED        3      7      3
  PANK1 WILD-TYPE    161    240    140
D288V5, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PANK1 MUTATED        0      4      5      1      3
  PANK1 WILD-TYPE    121    100     86    120    114
D288V6, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             4             100
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PANK1 MUTATED        1     10      2
  PANK1 WILD-TYPE    158    241    163
D288V7, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PANK1 MUTATED        1      5      5      1      1
  PANK1 WILD-TYPE    117    126    146     93     80
D288V8, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PANK1 MUTATED        1      4      1      1      3
  PANK1 WILD-TYPE    117    132    114     39     68
D288V9, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PANK1 MUTATED        0      3      5      1      1
  PANK1 WILD-TYPE     48    106    125    100     91
D288V10, multiclass
        clus
vv       PANK1 MUTATED PANK1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(289) Variable = UGP2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGP2 MUTATED        0      0      0      9
  UGP2 WILD-TYPE    135     92    172    167
D289V1, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGP2 MUTATED        6      0      2
  UGP2 WILD-TYPE    209    155    160
D289V2, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGP2 MUTATED        2      6      0      0
  UGP2 WILD-TYPE    133    118    125     60
D289V3, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            6            118
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGP2 MUTATED        6      2      0
  UGP2 WILD-TYPE    247    100     89
D289V4, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGP2 MUTATED        1      7      0
  UGP2 WILD-TYPE    163    240    143
D289V5, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGP2 MUTATED        0      1      6      0      1
  UGP2 WILD-TYPE    121    103     85    121    116
D289V6, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGP2 MUTATED        0      6      3
  UGP2 WILD-TYPE    159    245    162
D289V7, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGP2 MUTATED        0      5      3      0      1
  UGP2 WILD-TYPE    118    126    148     94     80
D289V8, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGP2 MUTATED        0      5      1      0      2
  UGP2 WILD-TYPE    118    131    114     40     69
D289V9, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGP2 MUTATED        0      3      4      1      0
  UGP2 WILD-TYPE     48    106    126    100     92
D289V10, multiclass
        clus
vv       UGP2 MUTATED UGP2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(290) Variable = CASD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASD1 MUTATED        2      0      3     10
  CASD1 WILD-TYPE    133     92    169    166
D290V1, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASD1 MUTATED        9      3      0
  CASD1 WILD-TYPE    206    152    162
D290V2, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             3             152
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASD1 MUTATED        8      5      1      0
  CASD1 WILD-TYPE    127    119    124     60
D290V3, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASD1 MUTATED        9      4      1
  CASD1 WILD-TYPE    244     98     88
D290V4, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASD1 MUTATED        4      9      1
  CASD1 WILD-TYPE    160    238    142
D290V5, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASD1 MUTATED        0      3      7      3      1
  CASD1 WILD-TYPE    121    101     84    118    116
D290V6, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASD1 MUTATED        5     10      0
  CASD1 WILD-TYPE    154    241    165
D290V7, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            10             241
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASD1 MUTATED        1      7      4      3      0
  CASD1 WILD-TYPE    117    124    147     91     81
D290V8, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             3              91
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASD1 MUTATED        3      3      0      1      3
  CASD1 WILD-TYPE    115    133    115     39     68
D290V9, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASD1 MUTATED        0      4      3      0      3
  CASD1 WILD-TYPE     48    105    127    101     89
D290V10, multiclass
        clus
vv       CASD1 MUTATED CASD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(291) Variable = NT5M MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NT5M MUTATED        0      0      2      5
  NT5M WILD-TYPE    135     92    170    171
D291V1, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NT5M MUTATED        5      0      0
  NT5M WILD-TYPE    210    155    162
D291V2, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NT5M MUTATED        1      1      2      0
  NT5M WILD-TYPE    134    123    123     60
D291V3, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1            123
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NT5M MUTATED        3      0      1
  NT5M WILD-TYPE    250    102     88
D291V4, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            3            250
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NT5M MUTATED        0      3      3
  NT5M WILD-TYPE    164    244    140
D291V5, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            0            164
  CLUS_2            3            244
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5M MUTATED        1      0      4      0      1
  NT5M WILD-TYPE    120    104     87    121    116
D291V6, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NT5M MUTATED        1      5      1
  NT5M WILD-TYPE    158    246    164
D291V7, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5M MUTATED        0      4      3      0      0
  NT5M WILD-TYPE    118    127    148     94     81
D291V8, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5M MUTATED        1      3      0      0      1
  NT5M WILD-TYPE    117    133    115     40     70
D291V9, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5M MUTATED        1      2      2      0      0
  NT5M WILD-TYPE     47    107    128    101     92
D291V10, multiclass
        clus
vv       NT5M MUTATED NT5M WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(292) Variable = AZGP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AZGP1 MUTATED        1      1      1      1
  AZGP1 WILD-TYPE    134     91    171    175
D292V1, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             1             175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AZGP1 MUTATED        3      1      0
  AZGP1 WILD-TYPE    212    154    162
D292V2, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AZGP1 MUTATED        3      1      0      0
  AZGP1 WILD-TYPE    132    123    125     60
D292V3, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AZGP1 MUTATED        4      0      0
  AZGP1 WILD-TYPE    249    102     89
D292V4, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AZGP1 MUTATED        1      3      0
  AZGP1 WILD-TYPE    163    244    143
D292V5, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AZGP1 MUTATED        1      0      3      0      0
  AZGP1 WILD-TYPE    120    104     88    121    117
D292V6, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AZGP1 MUTATED        0      3      1
  AZGP1 WILD-TYPE    159    248    164
D292V7, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AZGP1 MUTATED        1      3      0      0      0
  AZGP1 WILD-TYPE    117    128    151     94     81
D292V8, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             0             151
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AZGP1 MUTATED        0      2      1      1      0
  AZGP1 WILD-TYPE    118    134    114     39     71
D292V9, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AZGP1 MUTATED        0      3      0      1      0
  AZGP1 WILD-TYPE     48    106    130    100     92
D292V10, multiclass
        clus
vv       AZGP1 MUTATED AZGP1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(293) Variable = RAB42 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAB42 MUTATED        0      0      0      5
  RAB42 WILD-TYPE    135     92    172    171
D293V1, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB42 MUTATED        4      0      0
  RAB42 WILD-TYPE    211    155    162
D293V2, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAB42 MUTATED        2      1      1      0
  RAB42 WILD-TYPE    133    123    124     60
D293V3, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB42 MUTATED        3      0      1
  RAB42 WILD-TYPE    250    102     88
D293V4, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB42 MUTATED        0      4      1
  RAB42 WILD-TYPE    164    243    142
D293V5, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB42 MUTATED        0      2      2      0      1
  RAB42 WILD-TYPE    121    102     89    121    116
D293V6, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB42 MUTATED        0      3      2
  RAB42 WILD-TYPE    159    248    163
D293V7, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB42 MUTATED        1      1      2      0      1
  RAB42 WILD-TYPE    117    130    149     94     80
D293V8, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             130
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB42 MUTATED        0      2      2      0      0
  RAB42 WILD-TYPE    118    134    113     40     71
D293V9, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB42 MUTATED        0      0      3      1      0
  RAB42 WILD-TYPE     48    109    127    100     92
D293V10, multiclass
        clus
vv       RAB42 MUTATED RAB42 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             0             109
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(294) Variable = C11ORF80 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C11ORF80 MUTATED        2      1      2      4
  C11ORF80 WILD-TYPE    133     91    170    172
D294V1, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF80 MUTATED        5      1      2
  C11ORF80 WILD-TYPE    210    154    160
D294V2, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                1                154
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C11ORF80 MUTATED        2      5      0      0
  C11ORF80 WILD-TYPE    133    119    125     60
D294V3, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                5                119
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF80 MUTATED        4      3      0
  C11ORF80 WILD-TYPE    249     99     89
D294V4, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF80 MUTATED        3      5      0
  C11ORF80 WILD-TYPE    161    242    143
D294V5, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                5                242
  CLUS_3                0                143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF80 MUTATED        0      0      6      2      0
  C11ORF80 WILD-TYPE    121    104     85    119    117
D294V6, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                0                104
  CLUS_3                6                 85
  CLUS_4                2                119
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF80 MUTATED        3      5      1
  C11ORF80 WILD-TYPE    156    246    164
D294V7, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                5                246
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF80 MUTATED        0      6      1      2      0
  C11ORF80 WILD-TYPE    118    125    150     92     81
D294V8, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                125
  CLUS_3                1                150
  CLUS_4                2                 92
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF80 MUTATED        2      3      1      1      0
  C11ORF80 WILD-TYPE    116    133    114     39     71
D294V9, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                3                133
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF80 MUTATED        0      3      2      0      2
  C11ORF80 WILD-TYPE     48    106    128    101     90
D294V10, multiclass
        clus
vv       C11ORF80 MUTATED C11ORF80 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(295) Variable = OXNAD1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OXNAD1 MUTATED        2      0      3      4
  OXNAD1 WILD-TYPE    133     92    169    172
D295V1, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              3              169
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OXNAD1 MUTATED        7      1      1
  OXNAD1 WILD-TYPE    208    154    161
D295V2, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OXNAD1 MUTATED        2      1      1      1
  OXNAD1 WILD-TYPE    133    123    124     59
D295V3, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1              123
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OXNAD1 MUTATED        4      0      1
  OXNAD1 WILD-TYPE    249    102     88
D295V4, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OXNAD1 MUTATED        1      7      1
  OXNAD1 WILD-TYPE    163    240    142
D295V5, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXNAD1 MUTATED        0      3      4      1      1
  OXNAD1 WILD-TYPE    121    101     87    120    116
D295V6, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OXNAD1 MUTATED        1      7      1
  OXNAD1 WILD-TYPE    158    244    164
D295V7, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              7              244
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXNAD1 MUTATED        0      7      0      1      1
  OXNAD1 WILD-TYPE    118    124    151     93     80
D295V8, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              124
  CLUS_3              0              151
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXNAD1 MUTATED        1      5      1      1      0
  OXNAD1 WILD-TYPE    117    131    114     39     71
D295V9, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXNAD1 MUTATED        0      6      0      1      1
  OXNAD1 WILD-TYPE     48    103    130    100     91
D295V10, multiclass
        clus
vv       OXNAD1 MUTATED OXNAD1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              0              130
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(296) Variable = KLRK1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLRK1 MUTATED        0      0      3      5
  KLRK1 WILD-TYPE    135     92    169    171
D296V1, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRK1 MUTATED        5      2      0
  KLRK1 WILD-TYPE    210    153    162
D296V2, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLRK1 MUTATED        0      2      5      0
  KLRK1 WILD-TYPE    135    122    120     60
D296V3, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2             122
  CLUS_3             5             120
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRK1 MUTATED        3      0      4
  KLRK1 WILD-TYPE    250    102     85
D296V4, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRK1 MUTATED        2      3      3
  KLRK1 WILD-TYPE    162    244    140
D296V5, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRK1 MUTATED        1      0      3      2      2
  KLRK1 WILD-TYPE    120    104     88    119    115
D296V6, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRK1 MUTATED        1      3      4
  KLRK1 WILD-TYPE    158    248    161
D296V7, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             3             248
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRK1 MUTATED        0      3      1      2      2
  KLRK1 WILD-TYPE    118    128    150     92     79
D296V8, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             1             150
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRK1 MUTATED        1      3      3      0      0
  KLRK1 WILD-TYPE    117    133    112     40     71
D296V9, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRK1 MUTATED        0      3      2      0      2
  KLRK1 WILD-TYPE     48    106    128    101     90
D296V10, multiclass
        clus
vv       KLRK1 MUTATED KLRK1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(297) Variable = IPO11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IPO11 MUTATED        1      0      1     10
  IPO11 WILD-TYPE    134     92    171    166
D297V1, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IPO11 MUTATED        7      1      3
  IPO11 WILD-TYPE    208    154    159
D297V2, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IPO11 MUTATED        2      5      1      2
  IPO11 WILD-TYPE    133    119    124     58
D297V3, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IPO11 MUTATED        6      3      1
  IPO11 WILD-TYPE    247     99     88
D297V4, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IPO11 MUTATED        2      6      4
  IPO11 WILD-TYPE    162    241    139
D297V5, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO11 MUTATED        1      2      4      2      3
  IPO11 WILD-TYPE    120    102     87    119    114
D297V6, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IPO11 MUTATED        0      8      5
  IPO11 WILD-TYPE    159    243    160
D297V7, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             8             243
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO11 MUTATED        2      5      4      1      1
  IPO11 WILD-TYPE    116    126    147     93     80
D297V8, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO11 MUTATED        0      2      4      0      4
  IPO11 WILD-TYPE    118    134    111     40     67
D297V9, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             4             111
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPO11 MUTATED        0      3      3      3      1
  IPO11 WILD-TYPE     48    106    127     98     91
D297V10, multiclass
        clus
vv       IPO11 MUTATED IPO11 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(298) Variable = GAS6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAS6 MUTATED        3      0      2     13
  GAS6 WILD-TYPE    132     92    170    163
D298V1, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAS6 MUTATED        9      2      3
  GAS6 WILD-TYPE    206    153    159
D298V2, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAS6 MUTATED        5      6      2      4
  GAS6 WILD-TYPE    130    118    123     56
D298V3, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            4             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAS6 MUTATED       10      4      3
  GAS6 WILD-TYPE    243     98     86
D298V4, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            4             98
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAS6 MUTATED        2     10      3
  GAS6 WILD-TYPE    162    237    140
D298V5, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            2            162
  CLUS_2           10            237
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAS6 MUTATED        0      5      5      2      3
  GAS6 WILD-TYPE    121     99     86    119    114
D298V6, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            5             99
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAS6 MUTATED        3     11      4
  GAS6 WILD-TYPE    156    240    161
D298V7, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           11            240
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAS6 MUTATED        2      6      7      2      1
  GAS6 WILD-TYPE    116    125    144     92     80
D298V8, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            7            144
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAS6 MUTATED        1      5      1      3      4
  GAS6 WILD-TYPE    117    131    114     37     67
D298V9, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            3             37
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAS6 MUTATED        0      5      6      1      2
  GAS6 WILD-TYPE     48    104    124    100     90
D298V10, multiclass
        clus
vv       GAS6 MUTATED GAS6 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            6            124
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(299) Variable = DMXL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DMXL2 MUTATED        4     10     13     23
  DMXL2 WILD-TYPE    131     82    159    153
D299V1, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2            10              82
  CLUS_3            13             159
  CLUS_4            23             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DMXL2 MUTATED       26      7     12
  DMXL2 WILD-TYPE    189    148    150
D299V2, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1            26             189
  CLUS_2             7             148
  CLUS_3            12             150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DMXL2 MUTATED       12     13      7      4
  DMXL2 WILD-TYPE    123    111    118     56
D299V3, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1            12             123
  CLUS_2            13             111
  CLUS_3             7             118
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DMXL2 MUTATED       24      5      7
  DMXL2 WILD-TYPE    229     97     82
D299V4, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1            24             229
  CLUS_2             5              97
  CLUS_3             7              82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DMXL2 MUTATED        7     24     18
  DMXL2 WILD-TYPE    157    223    125
D299V5, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            24             223
  CLUS_3            18             125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DMXL2 MUTATED        9     11     12      2     15
  DMXL2 WILD-TYPE    112     93     79    119    102
D299V6, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1             9             112
  CLUS_2            11              93
  CLUS_3            12              79
  CLUS_4             2             119
  CLUS_5            15             102
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DMXL2 MUTATED        9     28     13
  DMXL2 WILD-TYPE    150    223    152
D299V7, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1             9             150
  CLUS_2            28             223
  CLUS_3            13             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DMXL2 MUTATED       11     15     16      2      6
  DMXL2 WILD-TYPE    107    116    135     92     75
D299V8, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1            11             107
  CLUS_2            15             116
  CLUS_3            16             135
  CLUS_4             2              92
  CLUS_5             6              75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DMXL2 MUTATED        5     14     10      4      6
  DMXL2 WILD-TYPE    113    122    105     36     65
D299V9, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            14             122
  CLUS_3            10             105
  CLUS_4             4              36
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DMXL2 MUTATED        4     10     12     11      2
  DMXL2 WILD-TYPE     44     99    118     90     90
D299V10, multiclass
        clus
vv       DMXL2 MUTATED DMXL2 WILD-TYPE
  CLUS_1             4              44
  CLUS_2            10              99
  CLUS_3            12             118
  CLUS_4            11              90
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(300) Variable = IRS1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS1 MUTATED        0      2      3     21
  IRS1 WILD-TYPE    135     90    169    155
D300V1, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4           21            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS1 MUTATED       14      4      5
  IRS1 WILD-TYPE    201    151    157
D300V2, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1           14            201
  CLUS_2            4            151
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS1 MUTATED        8     10      2      2
  IRS1 WILD-TYPE    127    114    123     58
D300V3, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            8            127
  CLUS_2           10            114
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS1 MUTATED       15      5      2
  IRS1 WILD-TYPE    238     97     87
D300V4, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1           15            238
  CLUS_2            5             97
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS1 MUTATED        4     16      6
  IRS1 WILD-TYPE    160    231    137
D300V5, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           16            231
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS1 MUTATED        3      4     13      2      4
  IRS1 WILD-TYPE    118    100     78    119    113
D300V6, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            4            100
  CLUS_3           13             78
  CLUS_4            2            119
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS1 MUTATED        3     19      4
  IRS1 WILD-TYPE    156    232    161
D300V7, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           19            232
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS1 MUTATED        1      9     12      2      2
  IRS1 WILD-TYPE    117    122    139     92     79
D300V8, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            9            122
  CLUS_3           12            139
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS1 MUTATED        2      8      1      3      7
  IRS1 WILD-TYPE    116    128    114     37     64
D300V9, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            8            128
  CLUS_3            1            114
  CLUS_4            3             37
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS1 MUTATED        1      7     10      1      2
  IRS1 WILD-TYPE     47    102    120    100     90
D300V10, multiclass
        clus
vv       IRS1 MUTATED IRS1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            7            102
  CLUS_3           10            120
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(301) Variable = HIST1H1A MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIST1H1A MUTATED        0      1      3      7
  HIST1H1A WILD-TYPE    135     91    169    169
D301V1, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HIST1H1A MUTATED        3      2      2
  HIST1H1A WILD-TYPE    212    153    160
D301V2, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                3                212
  CLUS_2                2                153
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIST1H1A MUTATED        2      7      1      1
  HIST1H1A WILD-TYPE    133    117    124     59
D301V3, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                2                133
  CLUS_2                7                117
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HIST1H1A MUTATED        7      3      1
  HIST1H1A WILD-TYPE    246     99     88
D301V4, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                7                246
  CLUS_2                3                 99
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HIST1H1A MUTATED        3      4      2
  HIST1H1A WILD-TYPE    161    243    141
D301V5, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                3                161
  CLUS_2                4                243
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIST1H1A MUTATED        1      1      3      2      2
  HIST1H1A WILD-TYPE    120    103     88    119    115
D301V6, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                3                 88
  CLUS_4                2                119
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HIST1H1A MUTATED        3      5      3
  HIST1H1A WILD-TYPE    156    246    162
D301V7, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                3                156
  CLUS_2                5                246
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIST1H1A MUTATED        1      1      7      2      0
  HIST1H1A WILD-TYPE    117    130    144     92     81
D301V8, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                1                117
  CLUS_2                1                130
  CLUS_3                7                144
  CLUS_4                2                 92
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIST1H1A MUTATED        2      0      2      0      3
  HIST1H1A WILD-TYPE    116    136    113     40     68
D301V9, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                2                116
  CLUS_2                0                136
  CLUS_3                2                113
  CLUS_4                0                 40
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIST1H1A MUTATED        0      1      4      0      2
  HIST1H1A WILD-TYPE     48    108    126    101     90
D301V10, multiclass
        clus
vv       HIST1H1A MUTATED HIST1H1A WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                4                126
  CLUS_4                0                101
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(302) Variable = CTSO MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSO MUTATED        0      2      1      4
  CTSO WILD-TYPE    135     90    171    172
D302V1, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSO MUTATED        5      1      0
  CTSO WILD-TYPE    210    154    162
D302V2, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSO MUTATED        3      2      1      0
  CTSO WILD-TYPE    132    122    124     60
D302V3, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSO MUTATED        6      0      0
  CTSO WILD-TYPE    247    102     89
D302V4, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            6            247
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSO MUTATED        2      4      1
  CTSO WILD-TYPE    162    243    142
D302V5, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSO MUTATED        1      2      3      0      1
  CTSO WILD-TYPE    120    102     88    121    116
D302V6, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSO MUTATED        1      4      2
  CTSO WILD-TYPE    158    247    163
D302V7, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSO MUTATED        2      3      2      0      0
  CTSO WILD-TYPE    116    128    149     94     81
D302V8, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSO MUTATED        0      2      2      1      1
  CTSO WILD-TYPE    118    134    113     39     70
D302V9, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSO MUTATED        1      2      2      1      0
  CTSO WILD-TYPE     47    107    128    100     92
D302V10, multiclass
        clus
vv       CTSO MUTATED CTSO WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(303) Variable = CASC3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASC3 MUTATED        3      1      0      7
  CASC3 WILD-TYPE    132     91    172    169
D303V1, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASC3 MUTATED        8      2      1
  CASC3 WILD-TYPE    207    153    161
D303V2, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASC3 MUTATED        4      6      0      0
  CASC3 WILD-TYPE    131    118    125     60
D303V3, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASC3 MUTATED        5      5      0
  CASC3 WILD-TYPE    248     97     89
D303V4, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             5              97
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASC3 MUTATED        1      7      3
  CASC3 WILD-TYPE    163    240    140
D303V5, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASC3 MUTATED        0      1      6      0      4
  CASC3 WILD-TYPE    121    103     85    121    113
D303V6, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASC3 MUTATED        1      7      3
  CASC3 WILD-TYPE    158    244    162
D303V7, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASC3 MUTATED        2      3      5      0      1
  CASC3 WILD-TYPE    116    128    146     94     80
D303V8, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             128
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASC3 MUTATED        1      4      3      0      2
  CASC3 WILD-TYPE    117    132    112     40     69
D303V9, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASC3 MUTATED        0      2      5      3      0
  CASC3 WILD-TYPE     48    107    125     98     92
D303V10, multiclass
        clus
vv       CASC3 MUTATED CASC3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(304) Variable = TNFSF10 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF10 MUTATED        5      0      0      4
  TNFSF10 WILD-TYPE    130     92    172    172
D304V1, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF10 MUTATED        4      1      1
  TNFSF10 WILD-TYPE    211    154    161
D304V2, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF10 MUTATED        2      4      0      1
  TNFSF10 WILD-TYPE    133    120    125     59
D304V3, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF10 MUTATED        4      3      0
  TNFSF10 WILD-TYPE    249     99     89
D304V4, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF10 MUTATED        0      7      0
  TNFSF10 WILD-TYPE    164    240    143
D304V5, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               7               240
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF10 MUTATED        0      1      6      0      0
  TNFSF10 WILD-TYPE    121    103     85    121    117
D304V6, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               6                85
  CLUS_4               0               121
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF10 MUTATED        0      9      0
  TNFSF10 WILD-TYPE    159    242    165
D304V7, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               9               242
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF10 MUTATED        2      5      2      0      0
  TNFSF10 WILD-TYPE    116    126    149     94     81
D304V8, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF10 MUTATED        0      3      0      1      1
  TNFSF10 WILD-TYPE    118    133    115     39     70
D304V9, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF10 MUTATED        0      4      1      0      0
  TNFSF10 WILD-TYPE     48    105    129    101     92
D304V10, multiclass
        clus
vv       TNFSF10 MUTATED TNFSF10 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               1               129
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(305) Variable = RIC3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RIC3 MUTATED        0      0      2      7
  RIC3 WILD-TYPE    135     92    170    169
D305V1, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIC3 MUTATED        7      1      1
  RIC3 WILD-TYPE    208    154    161
D305V2, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RIC3 MUTATED        2      3      1      1
  RIC3 WILD-TYPE    133    121    124     59
D305V3, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIC3 MUTATED        4      2      1
  RIC3 WILD-TYPE    249    100     88
D305V4, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIC3 MUTATED        2      5      2
  RIC3 WILD-TYPE    162    242    141
D305V5, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIC3 MUTATED        1      2      4      1      1
  RIC3 WILD-TYPE    120    102     87    120    116
D305V6, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RIC3 MUTATED        1      6      2
  RIC3 WILD-TYPE    158    245    163
D305V7, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIC3 MUTATED        0      4      3      1      1
  RIC3 WILD-TYPE    118    127    148     93     80
D305V8, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIC3 MUTATED        1      3      1      1      3
  RIC3 WILD-TYPE    117    133    114     39     68
D305V9, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RIC3 MUTATED        0      4      4      0      1
  RIC3 WILD-TYPE     48    105    126    101     91
D305V10, multiclass
        clus
vv       RIC3 MUTATED RIC3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(306) Variable = FAM108A1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM108A1 MUTATED        1      1      3      0
  FAM108A1 WILD-TYPE    134     91    169    176
D306V1, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4                0                176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  FAM108A1 MUTATED        2      2      2
  FAM108A1 WILD-TYPE    213    153    160
D306V2, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                2                213
  CLUS_2                2                153
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM108A1 MUTATED        1      2      0      1
  FAM108A1 WILD-TYPE    134    122    125     59
D306V3, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                122
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  FAM108A1 MUTATED        3      1      0
  FAM108A1 WILD-TYPE    250    101     89
D306V4, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                1                101
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  FAM108A1 MUTATED        3      2      1
  FAM108A1 WILD-TYPE    161    245    142
D306V5, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                2                245
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM108A1 MUTATED        1      0      1      3      1
  FAM108A1 WILD-TYPE    120    104     90    118    116
D306V6, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                1                 90
  CLUS_4                3                118
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  FAM108A1 MUTATED        3      2      1
  FAM108A1 WILD-TYPE    156    249    164
D306V7, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                2                249
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM108A1 MUTATED        2      2      0      2      0
  FAM108A1 WILD-TYPE    116    129    151     92     81
D306V8, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                2                129
  CLUS_3                0                151
  CLUS_4                2                 92
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM108A1 MUTATED        3      2      1      0      0
  FAM108A1 WILD-TYPE    115    134    114     40     71
D306V9, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                2                134
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM108A1 MUTATED        1      2      0      1      2
  FAM108A1 WILD-TYPE     47    107    130    100     90
D306V10, multiclass
        clus
vv       FAM108A1 MUTATED FAM108A1 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                2                107
  CLUS_3                0                130
  CLUS_4                1                100
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(307) Variable = GAB2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAB2 MUTATED        4      3      1      5
  GAB2 WILD-TYPE    131     89    171    171
D307V1, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3             89
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAB2 MUTATED        9      3      0
  GAB2 WILD-TYPE    206    152    162
D307V2, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GAB2 MUTATED        1      5      1      2
  GAB2 WILD-TYPE    134    119    124     58
D307V3, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            5            119
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAB2 MUTATED        3      5      1
  GAB2 WILD-TYPE    250     97     88
D307V4, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAB2 MUTATED        2      7      4
  GAB2 WILD-TYPE    162    240    139
D307V5, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            7            240
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAB2 MUTATED        3      1      5      2      2
  GAB2 WILD-TYPE    118    103     86    119    115
D307V6, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            1            103
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GAB2 MUTATED        4      9      0
  GAB2 WILD-TYPE    155    242    165
D307V7, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            4            155
  CLUS_2            9            242
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAB2 MUTATED        4      6      2      1      0
  GAB2 WILD-TYPE    114    125    149     93     81
D307V8, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            6            125
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAB2 MUTATED        4      4      1      0      2
  GAB2 WILD-TYPE    114    132    114     40     69
D307V9, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GAB2 MUTATED        1      5      2      2      1
  GAB2 WILD-TYPE     47    104    128     99     91
D307V10, multiclass
        clus
vv       GAB2 MUTATED GAB2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(308) Variable = BAHCC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAHCC1 MUTATED        4      1      1     11
  BAHCC1 WILD-TYPE    131     91    171    165
D308V1, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BAHCC1 MUTATED       10      0      5
  BAHCC1 WILD-TYPE    205    155    157
D308V2, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              0              155
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAHCC1 MUTATED        4      5      0      3
  BAHCC1 WILD-TYPE    131    119    125     57
D308V3, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BAHCC1 MUTATED        8      4      0
  BAHCC1 WILD-TYPE    245     98     89
D308V4, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BAHCC1 MUTATED        2     10      5
  BAHCC1 WILD-TYPE    162    237    138
D308V5, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             10              237
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAHCC1 MUTATED        3      3      8      1      2
  BAHCC1 WILD-TYPE    118    101     83    120    115
D308V6, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              3              101
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BAHCC1 MUTATED        3     12      2
  BAHCC1 WILD-TYPE    156    239    163
D308V7, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             12              239
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAHCC1 MUTATED        2      6      8      1      0
  BAHCC1 WILD-TYPE    116    125    143     93     81
D308V8, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              125
  CLUS_3              8              143
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAHCC1 MUTATED        1      6      2      1      5
  BAHCC1 WILD-TYPE    117    130    113     39     66
D308V9, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAHCC1 MUTATED        1      5      7      1      1
  BAHCC1 WILD-TYPE     47    104    123    100     91
D308V10, multiclass
        clus
vv       BAHCC1 MUTATED BAHCC1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              7              123
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(309) Variable = ARHGAP18 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGAP18 MUTATED        2      1      2      5
  ARHGAP18 WILD-TYPE    133     91    170    171
D309V1, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4                5                171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGAP18 MUTATED        5      2      1
  ARHGAP18 WILD-TYPE    210    153    161
D309V2, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                2                153
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGAP18 MUTATED        4      3      0      1
  ARHGAP18 WILD-TYPE    131    121    125     59
D309V3, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGAP18 MUTATED        5      2      1
  ARHGAP18 WILD-TYPE    248    100     88
D309V4, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                2                100
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGAP18 MUTATED        1      8      1
  ARHGAP18 WILD-TYPE    163    239    142
D309V5, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                8                239
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP18 MUTATED        2      1      5      1      1
  ARHGAP18 WILD-TYPE    119    103     86    120    116
D309V6, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                1                103
  CLUS_3                5                 86
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGAP18 MUTATED        1      9      0
  ARHGAP18 WILD-TYPE    158    242    165
D309V7, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                9                242
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP18 MUTATED        1      7      1      1      0
  ARHGAP18 WILD-TYPE    117    124    150     93     81
D309V8, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                124
  CLUS_3                1                150
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP18 MUTATED        1      4      0      1      2
  ARHGAP18 WILD-TYPE    117    132    115     39     69
D309V9, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                4                132
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGAP18 MUTATED        0      4      3      0      1
  ARHGAP18 WILD-TYPE     48    105    127    101     91
D309V10, multiclass
        clus
vv       ARHGAP18 MUTATED ARHGAP18 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                4                105
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(310) Variable = FHDC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FHDC1 MUTATED        4      2      1     12
  FHDC1 WILD-TYPE    131     90    171    164
D310V1, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHDC1 MUTATED       10      2      2
  FHDC1 WILD-TYPE    205    153    160
D310V2, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FHDC1 MUTATED        4      7      4      2
  FHDC1 WILD-TYPE    131    117    121     58
D310V3, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             7             117
  CLUS_3             4             121
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHDC1 MUTATED        6      8      3
  FHDC1 WILD-TYPE    247     94     86
D310V4, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             8              94
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHDC1 MUTATED        2     11      6
  FHDC1 WILD-TYPE    162    236    137
D310V5, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            11             236
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHDC1 MUTATED        1      3      8      2      5
  FHDC1 WILD-TYPE    120    101     83    119    112
D310V6, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FHDC1 MUTATED        2     13      4
  FHDC1 WILD-TYPE    157    238    161
D310V7, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            13             238
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHDC1 MUTATED        3      5      7      1      3
  FHDC1 WILD-TYPE    115    126    144     93     78
D310V8, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             126
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHDC1 MUTATED        3      3      2      2      3
  FHDC1 WILD-TYPE    115    133    113     38     68
D310V9, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FHDC1 MUTATED        1      5      5      1      1
  FHDC1 WILD-TYPE     47    104    125    100     91
D310V10, multiclass
        clus
vv       FHDC1 MUTATED FHDC1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(311) Variable = CCDC148 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC148 MUTATED        0      0      4      6
  CCDC148 WILD-TYPE    135     92    168    170
D311V1, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               4               168
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC148 MUTATED        7      2      1
  CCDC148 WILD-TYPE    208    153    161
D311V2, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC148 MUTATED        4      1      2      1
  CCDC148 WILD-TYPE    131    123    123     59
D311V3, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               1               123
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC148 MUTATED        6      0      2
  CCDC148 WILD-TYPE    247    102     87
D311V4, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC148 MUTATED        2      8      0
  CCDC148 WILD-TYPE    162    239    143
D311V5, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               8               239
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC148 MUTATED        0      4      4      2      0
  CCDC148 WILD-TYPE    121    100     87    119    117
D311V6, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               4               100
  CLUS_3               4                87
  CLUS_4               2               119
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC148 MUTATED        2      8      0
  CCDC148 WILD-TYPE    157    243    165
D311V7, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               8               243
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC148 MUTATED        0      6      2      2      0
  CCDC148 WILD-TYPE    118    125    149     92     81
D311V8, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               125
  CLUS_3               2               149
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC148 MUTATED        2      5      0      0      2
  CCDC148 WILD-TYPE    116    131    115     40     69
D311V9, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               131
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC148 MUTATED        0      5      2      0      2
  CCDC148 WILD-TYPE     48    104    128    101     90
D311V10, multiclass
        clus
vv       CCDC148 MUTATED CCDC148 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(312) Variable = SF3B3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SF3B3 MUTATED        2      5      9      8
  SF3B3 WILD-TYPE    133     87    163    168
D312V1, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5              87
  CLUS_3             9             163
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B3 MUTATED       11      5      5
  SF3B3 WILD-TYPE    204    150    157
D312V2, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             5             150
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SF3B3 MUTATED       11      3      4      2
  SF3B3 WILD-TYPE    124    121    121     58
D312V3, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             3             121
  CLUS_3             4             121
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B3 MUTATED       15      2      3
  SF3B3 WILD-TYPE    238    100     86
D312V4, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1            15             238
  CLUS_2             2             100
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B3 MUTATED        7     11      6
  SF3B3 WILD-TYPE    157    236    137
D312V5, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            11             236
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B3 MUTATED        5      5      7      3      4
  SF3B3 WILD-TYPE    116     99     84    118    113
D312V6, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             5              99
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B3 MUTATED        6     12      6
  SF3B3 WILD-TYPE    153    239    159
D312V7, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            12             239
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B3 MUTATED        6      7      5      3      3
  SF3B3 WILD-TYPE    112    124    146     91     78
D312V8, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             6             112
  CLUS_2             7             124
  CLUS_3             5             146
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B3 MUTATED        5      5      4      1      2
  SF3B3 WILD-TYPE    113    131    111     39     69
D312V9, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             5             131
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B3 MUTATED        2      3      7      2      3
  SF3B3 WILD-TYPE     46    106    123     99     89
D312V10, multiclass
        clus
vv       SF3B3 MUTATED SF3B3 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             7             123
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(313) Variable = PPIP5K2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPIP5K2 MUTATED        0      1      4     11
  PPIP5K2 WILD-TYPE    135     91    168    165
D313V1, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               4               168
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIP5K2 MUTATED        2      3      4
  PPIP5K2 WILD-TYPE    213    152    158
D313V2, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               3               152
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPIP5K2 MUTATED        8      4      2      2
  PPIP5K2 WILD-TYPE    127    120    123     58
D313V3, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               8               127
  CLUS_2               4               120
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIP5K2 MUTATED       14      0      2
  PPIP5K2 WILD-TYPE    239    102     87
D313V4, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1              14               239
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIP5K2 MUTATED        4      5      5
  PPIP5K2 WILD-TYPE    160    242    138
D313V5, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               5               242
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIP5K2 MUTATED        2      1      4      2      5
  PPIP5K2 WILD-TYPE    119    103     87    119    112
D313V6, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               1               103
  CLUS_3               4                87
  CLUS_4               2               119
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIP5K2 MUTATED        3     10      3
  PPIP5K2 WILD-TYPE    156    241    162
D313V7, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              10               241
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIP5K2 MUTATED        2      5      7      2      0
  PPIP5K2 WILD-TYPE    116    126    144     92     81
D313V8, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               7               144
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIP5K2 MUTATED        2      1      0      2      4
  PPIP5K2 WILD-TYPE    116    135    115     38     67
D313V9, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               135
  CLUS_3               0               115
  CLUS_4               2                38
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIP5K2 MUTATED        1      2      3      1      2
  PPIP5K2 WILD-TYPE     47    107    127    100     90
D313V10, multiclass
        clus
vv       PPIP5K2 MUTATED PPIP5K2 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(314) Variable = PTCHD3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTCHD3 MUTATED        4      2      2     18
  PTCHD3 WILD-TYPE    131     90    170    158
D314V1, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              2              170
  CLUS_4             18              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTCHD3 MUTATED       14      2      4
  PTCHD3 WILD-TYPE    201    153    158
D314V2, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              2              153
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTCHD3 MUTATED       10      8      1      2
  PTCHD3 WILD-TYPE    125    116    124     58
D314V3, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1             10              125
  CLUS_2              8              116
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTCHD3 MUTATED       16      4      1
  PTCHD3 WILD-TYPE    237     98     88
D314V4, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1             16              237
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTCHD3 MUTATED        8     11      5
  PTCHD3 WILD-TYPE    156    236    138
D314V5, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              8              156
  CLUS_2             11              236
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCHD3 MUTATED        2      4      8      3      7
  PTCHD3 WILD-TYPE    119    100     83    118    110
D314V6, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3              8               83
  CLUS_4              3              118
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTCHD3 MUTATED        4     18      4
  PTCHD3 WILD-TYPE    155    233    161
D314V7, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             18              233
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCHD3 MUTATED        2     14      5      3      2
  PTCHD3 WILD-TYPE    116    117    146     91     79
D314V8, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             14              117
  CLUS_3              5              146
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCHD3 MUTATED        2      8      3      3      3
  PTCHD3 WILD-TYPE    116    128    112     37     68
D314V9, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              8              128
  CLUS_3              3              112
  CLUS_4              3               37
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTCHD3 MUTATED        1      5      8      2      3
  PTCHD3 WILD-TYPE     47    104    122     99     89
D314V10, multiclass
        clus
vv       PTCHD3 MUTATED PTCHD3 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(315) Variable = DLGAP3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLGAP3 MUTATED        4      2      4     13
  DLGAP3 WILD-TYPE    131     90    168    163
D315V1, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DLGAP3 MUTATED       15      3      4
  DLGAP3 WILD-TYPE    200    152    158
D315V2, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              3              152
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLGAP3 MUTATED        8      7      2      3
  DLGAP3 WILD-TYPE    127    117    123     57
D315V3, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              7              117
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DLGAP3 MUTATED       13      4      3
  DLGAP3 WILD-TYPE    240     98     86
D315V4, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DLGAP3 MUTATED        6     11      5
  DLGAP3 WILD-TYPE    158    236    138
D315V5, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             11              236
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLGAP3 MUTATED        2      3      9      4      4
  DLGAP3 WILD-TYPE    119    101     82    117    113
D315V6, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              9               82
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DLGAP3 MUTATED        5     14      4
  DLGAP3 WILD-TYPE    154    237    161
D315V7, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             14              237
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLGAP3 MUTATED        1     10      7      3      2
  DLGAP3 WILD-TYPE    117    121    144     91     79
D315V8, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2             10              121
  CLUS_3              7              144
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLGAP3 MUTATED        3      8      2      2      5
  DLGAP3 WILD-TYPE    115    128    113     38     66
D315V9, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              128
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLGAP3 MUTATED        2      6      6      3      3
  DLGAP3 WILD-TYPE     46    103    124     98     89
D315V10, multiclass
        clus
vv       DLGAP3 MUTATED DLGAP3 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              6              103
  CLUS_3              6              124
  CLUS_4              3               98
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(316) Variable = KIN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIN MUTATED        1      0      0      7
  KIN WILD-TYPE    134     92    172    169
D316V1, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           1           134
  CLUS_2           0            92
  CLUS_3           0           172
  CLUS_4           7           169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KIN MUTATED        6      0      2
  KIN WILD-TYPE    209    155    160
D316V2, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           6           209
  CLUS_2           0           155
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIN MUTATED        4      2      0      0
  KIN WILD-TYPE    131    122    125     60
D316V3, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           4           131
  CLUS_2           2           122
  CLUS_3           0           125
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KIN MUTATED        3      2      1
  KIN WILD-TYPE    250    100     88
D316V4, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           3           250
  CLUS_2           2           100
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KIN MUTATED        2      3      3
  KIN WILD-TYPE    162    244    140
D316V5, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           2           162
  CLUS_2           3           244
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIN MUTATED        1      2      4      0      1
  KIN WILD-TYPE    120    102     87    121    116
D316V6, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           1           120
  CLUS_2           2           102
  CLUS_3           4            87
  CLUS_4           0           121
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  KIN MUTATED        2      6      0
  KIN WILD-TYPE    157    245    165
D316V7, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           2           157
  CLUS_2           6           245
  CLUS_3           0           165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIN MUTATED        2      2      4      0      0
  KIN WILD-TYPE    116    129    147     94     81
D316V8, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           2           116
  CLUS_2           2           129
  CLUS_3           4           147
  CLUS_4           0            94
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIN MUTATED        0      3      0      2      2
  KIN WILD-TYPE    118    133    115     38     69
D316V9, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           0           118
  CLUS_2           3           133
  CLUS_3           0           115
  CLUS_4           2            38
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIN MUTATED        2      1      4      0      0
  KIN WILD-TYPE     46    108    126    101     92
D316V10, multiclass
        clus
vv       KIN MUTATED KIN WILD-TYPE
  CLUS_1           2            46
  CLUS_2           1           108
  CLUS_3           4           126
  CLUS_4           0           101
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(317) Variable = KPNA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KPNA1 MUTATED        3      0      3      0
  KPNA1 WILD-TYPE    132     92    169    176
D317V1, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             0             176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA1 MUTATED        2      3      1
  KPNA1 WILD-TYPE    213    152    161
D317V2, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KPNA1 MUTATED        2      0      3      0
  KPNA1 WILD-TYPE    133    124    122     60
D317V3, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0             124
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA1 MUTATED        3      0      2
  KPNA1 WILD-TYPE    250    102     87
D317V4, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA1 MUTATED        3      2      1
  KPNA1 WILD-TYPE    161    245    142
D317V5, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             2             245
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA1 MUTATED        2      0      1      2      1
  KPNA1 WILD-TYPE    119    104     90    119    116
D317V6, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             1              90
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA1 MUTATED        4      1      1
  KPNA1 WILD-TYPE    155    250    164
D317V7, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             1             250
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA1 MUTATED        2      1      0      2      1
  KPNA1 WILD-TYPE    116    130    151     92     80
D317V8, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             1             130
  CLUS_3             0             151
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA1 MUTATED        4      1      1      0      0
  KPNA1 WILD-TYPE    114    135    114     40     71
D317V9, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA1 MUTATED        2      1      0      1      2
  KPNA1 WILD-TYPE     46    108    130    100     90
D317V10, multiclass
        clus
vv       KPNA1 MUTATED KPNA1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             1             108
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(318) Variable = KIAA0649 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0649 MUTATED        2      1      2     17
  KIAA0649 WILD-TYPE    133     91    170    159
D318V1, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4               17                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0649 MUTATED       16      0      4
  KIAA0649 WILD-TYPE    199    155    158
D318V2, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1               16                199
  CLUS_2                0                155
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0649 MUTATED        7      5      5      2
  KIAA0649 WILD-TYPE    128    119    120     58
D318V3, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                5                119
  CLUS_3                5                120
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0649 MUTATED       12      3      4
  KIAA0649 WILD-TYPE    241     99     85
D318V4, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                3                 99
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0649 MUTATED        4     12      6
  KIAA0649 WILD-TYPE    160    235    137
D318V5, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               12                235
  CLUS_3                6                137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0649 MUTATED        1      4     11      2      4
  KIAA0649 WILD-TYPE    120    100     80    119    113
D318V6, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                4                100
  CLUS_3               11                 80
  CLUS_4                2                119
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0649 MUTATED        1     14      7
  KIAA0649 WILD-TYPE    158    237    158
D318V7, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                1                158
  CLUS_2               14                237
  CLUS_3                7                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0649 MUTATED        1     10      8      0      3
  KIAA0649 WILD-TYPE    117    121    143     94     78
D318V8, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                1                117
  CLUS_2               10                121
  CLUS_3                8                143
  CLUS_4                0                 94
  CLUS_5                3                 78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0649 MUTATED        0      6      5      0      8
  KIAA0649 WILD-TYPE    118    130    110     40     63
D318V9, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                130
  CLUS_3                5                110
  CLUS_4                0                 40
  CLUS_5                8                 63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0649 MUTATED        0      7      8      4      0
  KIAA0649 WILD-TYPE     48    102    122     97     92
D318V10, multiclass
        clus
vv       KIAA0649 MUTATED KIAA0649 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                7                102
  CLUS_3                8                122
  CLUS_4                4                 97
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(319) Variable = NIN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIN MUTATED        6      3     10     14
  NIN WILD-TYPE    129     89    162    162
D319V1, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           6           129
  CLUS_2           3            89
  CLUS_3          10           162
  CLUS_4          14           162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NIN MUTATED       16     10      3
  NIN WILD-TYPE    199    145    159
D319V2, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1          16           199
  CLUS_2          10           145
  CLUS_3           3           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NIN MUTATED        9      7      3      3
  NIN WILD-TYPE    126    117    122     57
D319V3, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           9           126
  CLUS_2           7           117
  CLUS_3           3           122
  CLUS_4           3            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NIN MUTATED       16      3      3
  NIN WILD-TYPE    237     99     86
D319V4, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1          16           237
  CLUS_2           3            99
  CLUS_3           3            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NIN MUTATED       12     16      4
  NIN WILD-TYPE    152    231    139
D319V5, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1          12           152
  CLUS_2          16           231
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NIN MUTATED        5      7      9      8      3
  NIN WILD-TYPE    116     97     82    113    114
D319V6, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           5           116
  CLUS_2           7            97
  CLUS_3           9            82
  CLUS_4           8           113
  CLUS_5           3           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NIN MUTATED        6     22      5
  NIN WILD-TYPE    153    229    160
D319V7, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           6           153
  CLUS_2          22           229
  CLUS_3           5           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NIN MUTATED        3     15     10      4      1
  NIN WILD-TYPE    115    116    141     90     80
D319V8, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           3           115
  CLUS_2          15           116
  CLUS_3          10           141
  CLUS_4           4            90
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NIN MUTATED        5     13      4      1      4
  NIN WILD-TYPE    113    123    111     39     67
D319V9, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           5           113
  CLUS_2          13           123
  CLUS_3           4           111
  CLUS_4           1            39
  CLUS_5           4            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NIN MUTATED        3      9      8      3      4
  NIN WILD-TYPE     45    100    122     98     88
D319V10, multiclass
        clus
vv       NIN MUTATED NIN WILD-TYPE
  CLUS_1           3            45
  CLUS_2           9           100
  CLUS_3           8           122
  CLUS_4           3            98
  CLUS_5           4            88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(320) Variable = CTSC MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSC MUTATED        0      0      0     11
  CTSC WILD-TYPE    135     92    172    165
D320V1, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSC MUTATED        6      0      1
  CTSC WILD-TYPE    209    155    161
D320V2, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            6            209
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSC MUTATED        3      3      1      0
  CTSC WILD-TYPE    132    121    124     60
D320V3, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSC MUTATED        5      1      1
  CTSC WILD-TYPE    248    101     88
D320V4, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSC MUTATED        0      6      5
  CTSC WILD-TYPE    164    241    138
D320V5, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            0            164
  CLUS_2            6            241
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSC MUTATED        0      2      6      0      3
  CTSC WILD-TYPE    121    102     85    121    114
D320V6, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSC MUTATED        0      8      3
  CTSC WILD-TYPE    159    243    162
D320V7, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSC MUTATED        1      3      5      0      2
  CTSC WILD-TYPE    117    128    146     94     79
D320V8, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSC MUTATED        0      3      2      0      2
  CTSC WILD-TYPE    118    133    113     40     69
D320V9, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSC MUTATED        0      2      3      2      0
  CTSC WILD-TYPE     48    107    127     99     92
D320V10, multiclass
        clus
vv       CTSC MUTATED CTSC WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(321) Variable = TYRO3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRO3 MUTATED        2      0      5     10
  TYRO3 WILD-TYPE    133     92    167    166
D321V1, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             5             167
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRO3 MUTATED       13      1      2
  TYRO3 WILD-TYPE    202    154    160
D321V2, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TYRO3 MUTATED        5      4      2      3
  TYRO3 WILD-TYPE    130    120    123     57
D321V3, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRO3 MUTATED       10      2      2
  TYRO3 WILD-TYPE    243    100     87
D321V4, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRO3 MUTATED        1     12      4
  TYRO3 WILD-TYPE    163    235    139
D321V5, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            12             235
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TYRO3 MUTATED        1      6      5      1      4
  TYRO3 WILD-TYPE    120     98     86    120    113
D321V6, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             6              98
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TYRO3 MUTATED        1     12      4
  TYRO3 WILD-TYPE    158    239    161
D321V7, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TYRO3 MUTATED        1      9      6      0      1
  TYRO3 WILD-TYPE    117    122    145     94     80
D321V8, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             122
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TYRO3 MUTATED        2      8      1      2      3
  TYRO3 WILD-TYPE    116    128    114     38     68
D321V9, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             128
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TYRO3 MUTATED        0     11      3      2      0
  TYRO3 WILD-TYPE     48     98    127     99     92
D321V10, multiclass
        clus
vv       TYRO3 MUTATED TYRO3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2            11              98
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(322) Variable = C2ORF42 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2ORF42 MUTATED        2      2      3      7
  C2ORF42 WILD-TYPE    133     90    169    169
D322V1, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               3               169
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF42 MUTATED        6      3      2
  C2ORF42 WILD-TYPE    209    152    160
D322V2, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2ORF42 MUTATED        5      5      2      2
  C2ORF42 WILD-TYPE    130    119    123     58
D322V3, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               5               119
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF42 MUTATED        8      4      2
  C2ORF42 WILD-TYPE    245     98     87
D322V4, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               4                98
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF42 MUTATED        3      7      5
  C2ORF42 WILD-TYPE    161    240    138
D322V5, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               7               240
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF42 MUTATED        2      1      6      4      2
  C2ORF42 WILD-TYPE    119    103     85    117    115
D322V6, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               1               103
  CLUS_3               6                85
  CLUS_4               4               117
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF42 MUTATED        3      7      5
  C2ORF42 WILD-TYPE    156    244    160
D322V7, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               7               244
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF42 MUTATED        1      5      6      2      1
  C2ORF42 WILD-TYPE    117    126    145     92     80
D322V8, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               6               145
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF42 MUTATED        2      3      3      0      1
  C2ORF42 WILD-TYPE    116    133    112     40     70
D322V9, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               3               133
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF42 MUTATED        0      3      1      3      2
  C2ORF42 WILD-TYPE     48    106    129     98     90
D322V10, multiclass
        clus
vv       C2ORF42 MUTATED C2ORF42 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               1               129
  CLUS_4               3                98
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(323) Variable = COL12A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL12A1 MUTATED       10      8      9     37
  COL12A1 WILD-TYPE    125     84    163    139
D323V1, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1              10               125
  CLUS_2               8                84
  CLUS_3               9               163
  CLUS_4              37               139
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL12A1 MUTATED       35     10     11
  COL12A1 WILD-TYPE    180    145    151
D323V2, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1              35               180
  CLUS_2              10               145
  CLUS_3              11               151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL12A1 MUTATED       15     20      9      6
  COL12A1 WILD-TYPE    120    104    116     54
D323V3, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1              15               120
  CLUS_2              20               104
  CLUS_3               9               116
  CLUS_4               6                54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL12A1 MUTATED       29     12      9
  COL12A1 WILD-TYPE    224     90     80
D323V4, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1              29               224
  CLUS_2              12                90
  CLUS_3               9                80
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL12A1 MUTATED       11     33     17
  COL12A1 WILD-TYPE    153    214    126
D323V5, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1              11               153
  CLUS_2              33               214
  CLUS_3              17               126
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL12A1 MUTATED        7     12     19      6     17
  COL12A1 WILD-TYPE    114     92     72    115    100
D323V6, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1               7               114
  CLUS_2              12                92
  CLUS_3              19                72
  CLUS_4               6               115
  CLUS_5              17               100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL12A1 MUTATED        6     39     20
  COL12A1 WILD-TYPE    153    212    145
D323V7, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1               6               153
  CLUS_2              39               212
  CLUS_3              20               145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL12A1 MUTATED       12     22     21      5      5
  COL12A1 WILD-TYPE    106    109    130     89     76
D323V8, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1              12               106
  CLUS_2              22               109
  CLUS_3              21               130
  CLUS_4               5                89
  CLUS_5               5                76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL12A1 MUTATED        3     18     12      7     14
  COL12A1 WILD-TYPE    115    118    103     33     57
D323V9, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              18               118
  CLUS_3              12               103
  CLUS_4               7                33
  CLUS_5              14                57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL12A1 MUTATED        4     16     18     11      5
  COL12A1 WILD-TYPE     44     93    112     90     87
D323V10, multiclass
        clus
vv       COL12A1 MUTATED COL12A1 WILD-TYPE
  CLUS_1               4                44
  CLUS_2              16                93
  CLUS_3              18               112
  CLUS_4              11                90
  CLUS_5               5                87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(324) Variable = FAM60A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM60A MUTATED        1      1      0      2
  FAM60A WILD-TYPE    134     91    172    174
D324V1, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              2              174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM60A MUTATED        3      0      0
  FAM60A WILD-TYPE    212    155    162
D324V2, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM60A MUTATED        2      1      1      0
  FAM60A WILD-TYPE    133    123    124     60
D324V3, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1              123
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM60A MUTATED        3      0      1
  FAM60A WILD-TYPE    250    102     88
D324V4, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              3              250
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM60A MUTATED        0      3      1
  FAM60A WILD-TYPE    164    244    142
D324V5, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM60A MUTATED        1      1      1      0      1
  FAM60A WILD-TYPE    120    103     90    121    116
D324V6, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM60A MUTATED        0      3      1
  FAM60A WILD-TYPE    159    248    164
D324V7, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              0              159
  CLUS_2              3              248
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM60A MUTATED        0      3      1      0      0
  FAM60A WILD-TYPE    118    128    150     94     81
D324V8, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM60A MUTATED        0      3      0      0      0
  FAM60A WILD-TYPE    118    133    115     40     71
D324V9, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM60A MUTATED        0      2      1      0      0
  FAM60A WILD-TYPE     48    107    129    101     92
D324V10, multiclass
        clus
vv       FAM60A MUTATED FAM60A WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(325) Variable = CBWD6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBWD6 MUTATED        1      0      0      6
  CBWD6 WILD-TYPE    134     92    172    170
D325V1, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD6 MUTATED        6      0      0
  CBWD6 WILD-TYPE    209    155    162
D325V2, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBWD6 MUTATED        4      1      0      0
  CBWD6 WILD-TYPE    131    123    125     60
D325V3, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD6 MUTATED        5      0      0
  CBWD6 WILD-TYPE    248    102     89
D325V4, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD6 MUTATED        1      5      1
  CBWD6 WILD-TYPE    163    242    142
D325V5, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD6 MUTATED        1      2      4      0      0
  CBWD6 WILD-TYPE    120    102     87    121    117
D325V6, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBWD6 MUTATED        0      7      0
  CBWD6 WILD-TYPE    159    244    165
D325V7, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD6 MUTATED        0      6      1      0      0
  CBWD6 WILD-TYPE    118    125    150     94     81
D325V8, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD6 MUTATED        0      3      0      2      0
  CBWD6 WILD-TYPE    118    133    115     38     71
D325V9, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBWD6 MUTATED        1      4      0      0      0
  CBWD6 WILD-TYPE     47    105    130    101     92
D325V10, multiclass
        clus
vv       CBWD6 MUTATED CBWD6 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             0             130
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(326) Variable = SPG20 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPG20 MUTATED        4      1      1     19
  SPG20 WILD-TYPE    131     91    171    157
D326V1, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG20 MUTATED       14      1      3
  SPG20 WILD-TYPE    201    154    159
D326V2, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPG20 MUTATED        4     12      3      1
  SPG20 WILD-TYPE    131    112    122     59
D326V3, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             4             131
  CLUS_2            12             112
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG20 MUTATED       10      8      2
  SPG20 WILD-TYPE    243     94     87
D326V4, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             8              94
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG20 MUTATED        4     13      7
  SPG20 WILD-TYPE    160    234    136
D326V5, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            13             234
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG20 MUTATED        1      2     12      2      7
  SPG20 WILD-TYPE    120    102     79    119    110
D326V6, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3            12              79
  CLUS_4             2             119
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG20 MUTATED        2     19      4
  SPG20 WILD-TYPE    157    232    161
D326V7, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            19             232
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG20 MUTATED        1     11     11      0      2
  SPG20 WILD-TYPE    117    120    140     94     79
D326V8, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            11             120
  CLUS_3            11             140
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG20 MUTATED        0      8      2      0      5
  SPG20 WILD-TYPE    118    128    113     40     66
D326V9, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG20 MUTATED        0      8      5      2      0
  SPG20 WILD-TYPE     48    101    125     99     92
D326V10, multiclass
        clus
vv       SPG20 MUTATED SPG20 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(327) Variable = BPTF MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BPTF MUTATED        7      2      9     21
  BPTF WILD-TYPE    128     90    163    155
D327V1, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1            7            128
  CLUS_2            2             90
  CLUS_3            9            163
  CLUS_4           21            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BPTF MUTATED       19      8      5
  BPTF WILD-TYPE    196    147    157
D327V2, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1           19            196
  CLUS_2            8            147
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BPTF MUTATED       14     14      6      2
  BPTF WILD-TYPE    121    110    119     58
D327V3, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1           14            121
  CLUS_2           14            110
  CLUS_3            6            119
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BPTF MUTATED       23      7      6
  BPTF WILD-TYPE    230     95     83
D327V4, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1           23            230
  CLUS_2            7             95
  CLUS_3            6             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BPTF MUTATED        8     22      8
  BPTF WILD-TYPE    156    225    135
D327V5, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1            8            156
  CLUS_2           22            225
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BPTF MUTATED        6      5     16      5      6
  BPTF WILD-TYPE    115     99     75    116    111
D327V6, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1            6            115
  CLUS_2            5             99
  CLUS_3           16             75
  CLUS_4            5            116
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BPTF MUTATED       10     25      3
  BPTF WILD-TYPE    149    226    162
D327V7, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1           10            149
  CLUS_2           25            226
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BPTF MUTATED        8     13     12      5      0
  BPTF WILD-TYPE    110    118    139     89     81
D327V8, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1            8            110
  CLUS_2           13            118
  CLUS_3           12            139
  CLUS_4            5             89
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BPTF MUTATED        8      9      1      4      6
  BPTF WILD-TYPE    110    127    114     36     65
D327V9, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1            8            110
  CLUS_2            9            127
  CLUS_3            1            114
  CLUS_4            4             36
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BPTF MUTATED        3     10      8      2      5
  BPTF WILD-TYPE     45     99    122     99     87
D327V10, multiclass
        clus
vv       BPTF MUTATED BPTF WILD-TYPE
  CLUS_1            3             45
  CLUS_2           10             99
  CLUS_3            8            122
  CLUS_4            2             99
  CLUS_5            5             87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(328) Variable = MAP2K1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP2K1 MUTATED        1      0      5      3
  MAP2K1 WILD-TYPE    134     92    167    173
D328V1, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              5              167
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K1 MUTATED        5      2      2
  MAP2K1 WILD-TYPE    210    153    160
D328V2, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP2K1 MUTATED        3      2      1      0
  MAP2K1 WILD-TYPE    132    122    124     60
D328V3, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K1 MUTATED        4      1      1
  MAP2K1 WILD-TYPE    249    101     88
D328V4, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K1 MUTATED        3      5      0
  MAP2K1 WILD-TYPE    161    242    143
D328V5, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              5              242
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K1 MUTATED        1      1      3      1      2
  MAP2K1 WILD-TYPE    120    103     88    120    115
D328V6, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K1 MUTATED        2      5      2
  MAP2K1 WILD-TYPE    157    246    163
D328V7, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K1 MUTATED        1      2      4      1      1
  MAP2K1 WILD-TYPE    117    129    147     93     80
D328V8, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K1 MUTATED        2      3      1      0      3
  MAP2K1 WILD-TYPE    116    133    114     40     68
D328V9, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K1 MUTATED        1      1      5      1      1
  MAP2K1 WILD-TYPE     47    108    125    100     91
D328V10, multiclass
        clus
vv       MAP2K1 MUTATED MAP2K1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(329) Variable = RAI1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAI1 MUTATED        5      0      4     23
  RAI1 WILD-TYPE    130     92    168    153
D329V1, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4           23            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI1 MUTATED       19      2      6
  RAI1 WILD-TYPE    196    153    156
D329V2, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1           19            196
  CLUS_2            2            153
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAI1 MUTATED        9     13      2      3
  RAI1 WILD-TYPE    126    111    123     57
D329V3, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            9            126
  CLUS_2           13            111
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI1 MUTATED       16      9      2
  RAI1 WILD-TYPE    237     93     87
D329V4, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1           16            237
  CLUS_2            9             93
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI1 MUTATED        6     18      8
  RAI1 WILD-TYPE    158    229    135
D329V5, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            6            158
  CLUS_2           18            229
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI1 MUTATED        3      5     15      3      6
  RAI1 WILD-TYPE    118     99     76    118    111
D329V6, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            5             99
  CLUS_3           15             76
  CLUS_4            3            118
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI1 MUTATED        3     21      8
  RAI1 WILD-TYPE    156    230    157
D329V7, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           21            230
  CLUS_3            8            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI1 MUTATED        3     13     13      2      1
  RAI1 WILD-TYPE    115    118    138     92     80
D329V8, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           13            118
  CLUS_3           13            138
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI1 MUTATED        3     10      4      2      4
  RAI1 WILD-TYPE    115    126    111     38     67
D329V9, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           10            126
  CLUS_3            4            111
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI1 MUTATED        1      8      9      3      2
  RAI1 WILD-TYPE     47    101    121     98     90
D329V10, multiclass
        clus
vv       RAI1 MUTATED RAI1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            8            101
  CLUS_3            9            121
  CLUS_4            3             98
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(330) Variable = TRUB1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRUB1 MUTATED        1      0      1     10
  TRUB1 WILD-TYPE    134     92    171    166
D330V1, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRUB1 MUTATED        6      1      3
  TRUB1 WILD-TYPE    209    154    159
D330V2, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRUB1 MUTATED        4      5      1      1
  TRUB1 WILD-TYPE    131    119    124     59
D330V3, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRUB1 MUTATED        7      3      1
  TRUB1 WILD-TYPE    246     99     88
D330V4, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRUB1 MUTATED        3      6      3
  TRUB1 WILD-TYPE    161    241    140
D330V5, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             6             241
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRUB1 MUTATED        1      2      5      1      3
  TRUB1 WILD-TYPE    120    102     86    120    114
D330V6, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRUB1 MUTATED        2      7      3
  TRUB1 WILD-TYPE    157    244    162
D330V7, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRUB1 MUTATED        1      4      5      1      1
  TRUB1 WILD-TYPE    117    127    146     93     80
D330V8, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRUB1 MUTATED        1      3      1      1      4
  TRUB1 WILD-TYPE    117    133    114     39     67
D330V9, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRUB1 MUTATED        1      2      6      0      1
  TRUB1 WILD-TYPE     47    107    124    101     91
D330V10, multiclass
        clus
vv       TRUB1 MUTATED TRUB1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(331) Variable = SPATA20 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPATA20 MUTATED        2      2      2     12
  SPATA20 WILD-TYPE    133     90    170    164
D331V1, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA20 MUTATED       10      0      6
  SPATA20 WILD-TYPE    205    155    156
D331V2, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1              10               205
  CLUS_2               0               155
  CLUS_3               6               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPATA20 MUTATED        6      4      5      0
  SPATA20 WILD-TYPE    129    120    120     60
D331V3, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               4               120
  CLUS_3               5               120
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA20 MUTATED        8      3      4
  SPATA20 WILD-TYPE    245     99     85
D331V4, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               3                99
  CLUS_3               4                85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA20 MUTATED        1      9      8
  SPATA20 WILD-TYPE    163    238    135
D331V5, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               8               135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA20 MUTATED        2      3      6      1      6
  SPATA20 WILD-TYPE    119    101     85    120    111
D331V6, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               6               111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA20 MUTATED        2     10      6
  SPATA20 WILD-TYPE    157    241    159
D331V7, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              10               241
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA20 MUTATED        5      6      5      0      2
  SPATA20 WILD-TYPE    113    125    146     94     79
D331V8, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               5               113
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA20 MUTATED        0      3      6      4      2
  SPATA20 WILD-TYPE    118    133    109     36     69
D331V9, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               6               109
  CLUS_4               4                36
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA20 MUTATED        1      3      5      6      0
  SPATA20 WILD-TYPE     47    106    125     95     92
D331V10, multiclass
        clus
vv       SPATA20 MUTATED SPATA20 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               5               125
  CLUS_4               6                95
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(332) Variable = NOS3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOS3 MUTATED        2      2      5     11
  NOS3 WILD-TYPE    133     90    167    165
D332V1, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            5            167
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS3 MUTATED        9      4      3
  NOS3 WILD-TYPE    206    151    159
D332V2, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            4            151
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOS3 MUTATED        7      6      0      3
  NOS3 WILD-TYPE    128    118    125     57
D332V3, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            6            118
  CLUS_3            0            125
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS3 MUTATED       11      5      0
  NOS3 WILD-TYPE    242     97     89
D332V4, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS3 MUTATED        6     11      3
  NOS3 WILD-TYPE    158    236    140
D332V5, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            6            158
  CLUS_2           11            236
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS3 MUTATED        3      0     11      4      2
  NOS3 WILD-TYPE    118    104     80    117    115
D332V6, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            0            104
  CLUS_3           11             80
  CLUS_4            4            117
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS3 MUTATED        7     12      1
  NOS3 WILD-TYPE    152    239    164
D332V7, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            7            152
  CLUS_2           12            239
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS3 MUTATED        2      9      5      4      0
  NOS3 WILD-TYPE    116    122    146     90     81
D332V8, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            9            122
  CLUS_3            5            146
  CLUS_4            4             90
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS3 MUTATED        4      4      1      0      5
  NOS3 WILD-TYPE    114    132    114     40     66
D332V9, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS3 MUTATED        0      5      4      1      4
  NOS3 WILD-TYPE     48    104    126    100     88
D332V10, multiclass
        clus
vv       NOS3 MUTATED NOS3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(333) Variable = FAM155B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM155B MUTATED        3      2      1      8
  FAM155B WILD-TYPE    132     90    171    168
D333V1, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM155B MUTATED       11      1      1
  FAM155B WILD-TYPE    204    154    161
D333V2, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1              11               204
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM155B MUTATED        4      4      2      0
  FAM155B WILD-TYPE    131    120    123     60
D333V3, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               4               131
  CLUS_2               4               120
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM155B MUTATED        7      2      1
  FAM155B WILD-TYPE    246    100     88
D333V4, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               7               246
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM155B MUTATED        1     11      2
  FAM155B WILD-TYPE    163    236    141
D333V5, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               1               163
  CLUS_2              11               236
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM155B MUTATED        3      2      8      0      1
  FAM155B WILD-TYPE    118    102     83    121    116
D333V6, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               3               118
  CLUS_2               2               102
  CLUS_3               8                83
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM155B MUTATED        2      9      3
  FAM155B WILD-TYPE    157    242    162
D333V7, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               2               157
  CLUS_2               9               242
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM155B MUTATED        1      7      6      0      0
  FAM155B WILD-TYPE    117    124    145     94     81
D333V8, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               7               124
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM155B MUTATED        1      7      2      1      1
  FAM155B WILD-TYPE    117    129    113     39     70
D333V9, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               7               129
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM155B MUTATED        0      6      6      0      0
  FAM155B WILD-TYPE     48    103    124    101     92
D333V10, multiclass
        clus
vv       FAM155B MUTATED FAM155B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               6               103
  CLUS_3               6               124
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(334) Variable = MDM2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MDM2 MUTATED        0      2      3      4
  MDM2 WILD-TYPE    135     90    169    172
D334V1, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MDM2 MUTATED        3      2      2
  MDM2 WILD-TYPE    212    153    160
D334V2, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MDM2 MUTATED        4      3      1      1
  MDM2 WILD-TYPE    131    121    124     59
D334V3, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MDM2 MUTATED        7      1      1
  MDM2 WILD-TYPE    246    101     88
D334V4, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MDM2 MUTATED        2      5      1
  MDM2 WILD-TYPE    162    242    142
D334V5, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MDM2 MUTATED        2      1      2      2      1
  MDM2 WILD-TYPE    119    103     89    119    116
D334V6, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            2            119
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MDM2 MUTATED        3      5      1
  MDM2 WILD-TYPE    156    246    164
D334V7, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            5            246
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MDM2 MUTATED        1      2      3      2      1
  MDM2 WILD-TYPE    117    129    148     92     80
D334V8, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MDM2 MUTATED        2      1      1      0      1
  MDM2 WILD-TYPE    116    135    114     40     70
D334V9, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MDM2 MUTATED        0      1      1      1      2
  MDM2 WILD-TYPE     48    108    129    100     90
D334V10, multiclass
        clus
vv       MDM2 MUTATED MDM2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(335) Variable = ASB11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASB11 MUTATED        0      0      1      9
  ASB11 WILD-TYPE    135     92    171    167
D335V1, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASB11 MUTATED        6      0      4
  ASB11 WILD-TYPE    209    155    158
D335V2, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASB11 MUTATED        3      6      1      1
  ASB11 WILD-TYPE    132    118    124     59
D335V3, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASB11 MUTATED        6      5      0
  ASB11 WILD-TYPE    247     97     89
D335V4, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             5              97
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASB11 MUTATED        2      6      3
  ASB11 WILD-TYPE    162    241    140
D335V5, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB11 MUTATED        0      2      6      1      2
  ASB11 WILD-TYPE    121    102     85    120    115
D335V6, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASB11 MUTATED        1      9      1
  ASB11 WILD-TYPE    158    242    164
D335V7, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB11 MUTATED        1      4      5      1      0
  ASB11 WILD-TYPE    117    127    146     93     81
D335V8, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB11 MUTATED        0      2      0      2      6
  ASB11 WILD-TYPE    118    134    115     38     65
D335V9, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB11 MUTATED        1      3      4      1      1
  ASB11 WILD-TYPE     47    106    126    100     91
D335V10, multiclass
        clus
vv       ASB11 MUTATED ASB11 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(336) Variable = TAS2R10 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAS2R10 MUTATED        0      0      3      2
  TAS2R10 WILD-TYPE    135     92    169    174
D336V1, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R10 MUTATED        3      2      0
  TAS2R10 WILD-TYPE    212    153    162
D336V2, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               2               153
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAS2R10 MUTATED        3      0      0      1
  TAS2R10 WILD-TYPE    132    124    125     59
D336V3, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0               124
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R10 MUTATED        4      0      0
  TAS2R10 WILD-TYPE    249    102     89
D336V4, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R10 MUTATED        1      4      0
  TAS2R10 WILD-TYPE    163    243    143
D336V5, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R10 MUTATED        1      1      2      1      0
  TAS2R10 WILD-TYPE    120    103     89    120    117
D336V6, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R10 MUTATED        2      3      0
  TAS2R10 WILD-TYPE    157    248    165
D336V7, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               3               248
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R10 MUTATED        1      3      0      1      0
  TAS2R10 WILD-TYPE    117    128    151     93     81
D336V8, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               128
  CLUS_3               0               151
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R10 MUTATED        2      1      0      0      1
  TAS2R10 WILD-TYPE    116    135    115     40     70
D336V9, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               135
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R10 MUTATED        0      3      0      0      1
  TAS2R10 WILD-TYPE     48    106    130    101     91
D336V10, multiclass
        clus
vv       TAS2R10 MUTATED TAS2R10 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               0               130
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(337) Variable = B4GALT6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B4GALT6 MUTATED        2      1      2      4
  B4GALT6 WILD-TYPE    133     91    170    172
D337V1, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  B4GALT6 MUTATED        5      2      1
  B4GALT6 WILD-TYPE    210    153    161
D337V2, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B4GALT6 MUTATED        5      1      0      1
  B4GALT6 WILD-TYPE    130    123    125     59
D337V3, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               1               123
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  B4GALT6 MUTATED        6      1      0
  B4GALT6 WILD-TYPE    247    101     89
D337V4, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  B4GALT6 MUTATED        3      6      0
  B4GALT6 WILD-TYPE    161    241    143
D337V5, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               6               241
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALT6 MUTATED        1      1      5      2      0
  B4GALT6 WILD-TYPE    120    103     86    119    117
D337V6, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               5                86
  CLUS_4               2               119
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  B4GALT6 MUTATED        2      7      0
  B4GALT6 WILD-TYPE    157    244    165
D337V7, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               7               244
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALT6 MUTATED        1      5      1      2      0
  B4GALT6 WILD-TYPE    117    126    150     92     81
D337V8, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               1               150
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALT6 MUTATED        1      2      0      1      1
  B4GALT6 WILD-TYPE    117    134    115     39     70
D337V9, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALT6 MUTATED        1      3      0      0      1
  B4GALT6 WILD-TYPE     47    106    130    101     91
D337V10, multiclass
        clus
vv       B4GALT6 MUTATED B4GALT6 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               0               130
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(338) Variable = SNAPC2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNAPC2 MUTATED        0      1      1      7
  SNAPC2 WILD-TYPE    135     91    171    169
D338V1, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC2 MUTATED        8      0      1
  SNAPC2 WILD-TYPE    207    155    161
D338V2, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SNAPC2 MUTATED        5      1      0      1
  SNAPC2 WILD-TYPE    130    123    125     59
D338V3, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC2 MUTATED        7      0      0
  SNAPC2 WILD-TYPE    246    102     89
D338V4, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC2 MUTATED        0      6      3
  SNAPC2 WILD-TYPE    164    241    140
D338V5, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC2 MUTATED        0      2      5      0      2
  SNAPC2 WILD-TYPE    121    102     86    121    115
D338V6, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SNAPC2 MUTATED        0      7      2
  SNAPC2 WILD-TYPE    159    244    163
D338V7, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              7              244
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC2 MUTATED        0      3      5      0      1
  SNAPC2 WILD-TYPE    118    128    146     94     80
D338V8, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC2 MUTATED        0      3      1      1      3
  SNAPC2 WILD-TYPE    118    133    114     39     68
D338V9, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SNAPC2 MUTATED        0      2      5      1      0
  SNAPC2 WILD-TYPE     48    107    125    100     92
D338V10, multiclass
        clus
vv       SNAPC2 MUTATED SNAPC2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(339) Variable = TCHP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCHP MUTATED        3      0      1      9
  TCHP WILD-TYPE    132     92    171    167
D339V1, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCHP MUTATED        7      2      2
  TCHP WILD-TYPE    208    153    160
D339V2, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            7            208
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCHP MUTATED        5      3      2      1
  TCHP WILD-TYPE    130    121    123     59
D339V3, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCHP MUTATED        7      2      2
  TCHP WILD-TYPE    246    100     87
D339V4, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            7            246
  CLUS_2            2            100
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCHP MUTATED        1      7      3
  TCHP WILD-TYPE    163    240    140
D339V5, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCHP MUTATED        2      2      5      1      1
  TCHP WILD-TYPE    119    102     86    120    116
D339V6, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCHP MUTATED        1     10      2
  TCHP WILD-TYPE    158    241    163
D339V7, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            1            158
  CLUS_2           10            241
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCHP MUTATED        3      4      5      1      0
  TCHP WILD-TYPE    115    127    146     93     81
D339V8, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCHP MUTATED        2      2      2      2      3
  TCHP WILD-TYPE    116    134    113     38     68
D339V9, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCHP MUTATED        3      3      3      1      1
  TCHP WILD-TYPE     45    106    127    100     91
D339V10, multiclass
        clus
vv       TCHP MUTATED TCHP WILD-TYPE
  CLUS_1            3             45
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(340) Variable = ADNP2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADNP2 MUTATED        1      0      3     17
  ADNP2 WILD-TYPE    134     92    169    159
D340V1, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ADNP2 MUTATED       13      4      1
  ADNP2 WILD-TYPE    202    151    161
D340V2, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             4             151
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADNP2 MUTATED        7      9      1      1
  ADNP2 WILD-TYPE    128    115    124     59
D340V3, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             9             115
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ADNP2 MUTATED       12      5      1
  ADNP2 WILD-TYPE    241     97     88
D340V4, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ADNP2 MUTATED        2     14      3
  ADNP2 WILD-TYPE    162    233    140
D340V5, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            14             233
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP2 MUTATED        0      5     10      2      2
  ADNP2 WILD-TYPE    121     99     81    119    115
D340V6, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             5              99
  CLUS_3            10              81
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ADNP2 MUTATED        3     17      1
  ADNP2 WILD-TYPE    156    234    164
D340V7, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            17             234
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP2 MUTATED        1      6     12      2      0
  ADNP2 WILD-TYPE    117    125    139     92     81
D340V8, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3            12             139
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP2 MUTATED        1      7      1      1      6
  ADNP2 WILD-TYPE    117    129    114     39     65
D340V9, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADNP2 MUTATED        0      5      9      1      1
  ADNP2 WILD-TYPE     48    104    121    100     91
D340V10, multiclass
        clus
vv       ADNP2 MUTATED ADNP2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             9             121
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(341) Variable = PUS7L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PUS7L MUTATED        1      2      1      6
  PUS7L WILD-TYPE    134     90    171    170
D341V1, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PUS7L MUTATED        5      0      1
  PUS7L WILD-TYPE    210    155    161
D341V2, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PUS7L MUTATED        1      4      2      2
  PUS7L WILD-TYPE    134    120    123     58
D341V3, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             1             134
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PUS7L MUTATED        5      2      2
  PUS7L WILD-TYPE    248    100     87
D341V4, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PUS7L MUTATED        1      4      3
  PUS7L WILD-TYPE    163    243    140
D341V5, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PUS7L MUTATED        2      2      1      0      3
  PUS7L WILD-TYPE    119    102     90    121    114
D341V6, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             1              90
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PUS7L MUTATED        2      5      3
  PUS7L WILD-TYPE    157    246    162
D341V7, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             2             157
  CLUS_2             5             246
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PUS7L MUTATED        1      3      5      0      1
  PUS7L WILD-TYPE    117    128    146     94     80
D341V8, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PUS7L MUTATED        0      2      1      0      3
  PUS7L WILD-TYPE    118    134    114     40     68
D341V9, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PUS7L MUTATED        0      2      4      0      0
  PUS7L WILD-TYPE     48    107    126    101     92
D341V10, multiclass
        clus
vv       PUS7L MUTATED PUS7L WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(342) Variable = NCOA7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCOA7 MUTATED        3      0      4     11
  NCOA7 WILD-TYPE    132     92    168    165
D342V1, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCOA7 MUTATED        7      4      3
  NCOA7 WILD-TYPE    208    151    159
D342V2, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCOA7 MUTATED        4      7      3      1
  NCOA7 WILD-TYPE    131    117    122     59
D342V3, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             7             117
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCOA7 MUTATED        8      5      2
  NCOA7 WILD-TYPE    245     97     87
D342V4, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCOA7 MUTATED        2     11      2
  NCOA7 WILD-TYPE    162    236    141
D342V5, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            11             236
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCOA7 MUTATED        5      4      3      1      2
  NCOA7 WILD-TYPE    116    100     88    120    115
D342V6, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             4             100
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCOA7 MUTATED        2     14      2
  NCOA7 WILD-TYPE    157    237    163
D342V7, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            14             237
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCOA7 MUTATED        2      5      7      1      3
  NCOA7 WILD-TYPE    116    126    144     93     78
D342V8, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCOA7 MUTATED        2      5      1      0      5
  NCOA7 WILD-TYPE    116    131    114     40     66
D342V9, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCOA7 MUTATED        1      4      6      1      1
  NCOA7 WILD-TYPE     47    105    124    100     91
D342V10, multiclass
        clus
vv       NCOA7 MUTATED NCOA7 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(343) Variable = RAD50 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAD50 MUTATED        1      2      1     11
  RAD50 WILD-TYPE    134     90    171    165
D343V1, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAD50 MUTATED       10      1      1
  RAD50 WILD-TYPE    205    154    161
D343V2, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAD50 MUTATED        3      7      2      2
  RAD50 WILD-TYPE    132    117    123     58
D343V3, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             7             117
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAD50 MUTATED        8      5      1
  RAD50 WILD-TYPE    245     97     88
D343V4, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAD50 MUTATED        1     12      2
  RAD50 WILD-TYPE    163    235    141
D343V5, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            12             235
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD50 MUTATED        1      4      8      0      2
  RAD50 WILD-TYPE    120    100     83    121    115
D343V6, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAD50 MUTATED        1     12      2
  RAD50 WILD-TYPE    158    239    163
D343V7, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD50 MUTATED        2      8      3      0      2
  RAD50 WILD-TYPE    116    123    148     94     79
D343V8, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             123
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD50 MUTATED        1      7      0      0      2
  RAD50 WILD-TYPE    117    129    115     40     69
D343V9, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAD50 MUTATED        0      6      4      0      0
  RAD50 WILD-TYPE     48    103    126    101     92
D343V10, multiclass
        clus
vv       RAD50 MUTATED RAD50 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(344) Variable = KIAA1009 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1009 MUTATED        3      0      3     12
  KIAA1009 WILD-TYPE    132     92    169    164
D344V1, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                0                 92
  CLUS_3                3                169
  CLUS_4               12                164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1009 MUTATED       12      4      1
  KIAA1009 WILD-TYPE    203    151    161
D344V2, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1               12                203
  CLUS_2                4                151
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1009 MUTATED        7      6      1      1
  KIAA1009 WILD-TYPE    128    118    124     59
D344V3, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                6                118
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1009 MUTATED        9      5      1
  KIAA1009 WILD-TYPE    244     97     88
D344V4, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                9                244
  CLUS_2                5                 97
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1009 MUTATED        3     11      4
  KIAA1009 WILD-TYPE    161    236    139
D344V5, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               11                236
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1009 MUTATED        0      3     10      2      3
  KIAA1009 WILD-TYPE    121    101     81    119    114
D344V6, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                3                101
  CLUS_3               10                 81
  CLUS_4                2                119
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1009 MUTATED        3     11      4
  KIAA1009 WILD-TYPE    156    240    161
D344V7, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               11                240
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1009 MUTATED        3      6      6      2      1
  KIAA1009 WILD-TYPE    115    125    145     92     80
D344V8, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                6                125
  CLUS_3                6                145
  CLUS_4                2                 92
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1009 MUTATED        2      5      2      1      5
  KIAA1009 WILD-TYPE    116    131    113     39     66
D344V9, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                131
  CLUS_3                2                113
  CLUS_4                1                 39
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1009 MUTATED        0      5      6      2      2
  KIAA1009 WILD-TYPE     48    104    124     99     90
D344V10, multiclass
        clus
vv       KIAA1009 MUTATED KIAA1009 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                6                124
  CLUS_4                2                 99
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(345) Variable = PFKP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PFKP MUTATED        1      3      1     15
  PFKP WILD-TYPE    134     89    171    161
D345V1, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3             89
  CLUS_3            1            171
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PFKP MUTATED       13      1      1
  PFKP WILD-TYPE    202    154    161
D345V2, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1           13            202
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PFKP MUTATED        6      7      0      1
  PFKP WILD-TYPE    129    117    125     59
D345V3, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            6            129
  CLUS_2            7            117
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PFKP MUTATED        9      5      0
  PFKP WILD-TYPE    244     97     89
D345V4, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            9            244
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PFKP MUTATED        1     11      7
  PFKP WILD-TYPE    163    236    136
D345V5, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            1            163
  CLUS_2           11            236
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PFKP MUTATED        2      6      8      0      3
  PFKP WILD-TYPE    119     98     83    121    114
D345V6, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            2            119
  CLUS_2            6             98
  CLUS_3            8             83
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PFKP MUTATED        2     16      2
  PFKP WILD-TYPE    157    235    163
D345V7, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            2            157
  CLUS_2           16            235
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PFKP MUTATED        2      5     13      0      0
  PFKP WILD-TYPE    116    126    138     94     81
D345V8, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3           13            138
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PFKP MUTATED        0      4      1      2      5
  PFKP WILD-TYPE    118    132    114     38     66
D345V9, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PFKP MUTATED        2      3      7      0      0
  PFKP WILD-TYPE     46    106    123    101     92
D345V10, multiclass
        clus
vv       PFKP MUTATED PFKP WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            7            123
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(346) Variable = NT5DC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NT5DC1 MUTATED        1      0      0      7
  NT5DC1 WILD-TYPE    134     92    172    169
D346V1, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NT5DC1 MUTATED        7      0      1
  NT5DC1 WILD-TYPE    208    155    161
D346V2, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NT5DC1 MUTATED        4      2      0      0
  NT5DC1 WILD-TYPE    131    122    125     60
D346V3, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NT5DC1 MUTATED        4      0      2
  NT5DC1 WILD-TYPE    249    102     87
D346V4, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              0              102
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NT5DC1 MUTATED        0      6      2
  NT5DC1 WILD-TYPE    164    241    141
D346V5, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5DC1 MUTATED        0      3      3      0      2
  NT5DC1 WILD-TYPE    121    101     88    121    115
D346V6, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NT5DC1 MUTATED        1      6      1
  NT5DC1 WILD-TYPE    158    245    164
D346V7, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5DC1 MUTATED        2      4      2      0      0
  NT5DC1 WILD-TYPE    116    127    149     94     81
D346V8, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5DC1 MUTATED        0      4      1      1      2
  NT5DC1 WILD-TYPE    118    132    114     39     69
D346V9, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NT5DC1 MUTATED        0      3      4      1      0
  NT5DC1 WILD-TYPE     48    106    126    100     92
D346V10, multiclass
        clus
vv       NT5DC1 MUTATED NT5DC1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(347) Variable = TM7SF4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TM7SF4 MUTATED        5      3      3     13
  TM7SF4 WILD-TYPE    130     89    169    163
D347V1, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF4 MUTATED       16      3      3
  TM7SF4 WILD-TYPE    199    152    159
D347V2, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1             16              199
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TM7SF4 MUTATED       10      8      2      2
  TM7SF4 WILD-TYPE    125    116    123     58
D347V3, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1             10              125
  CLUS_2              8              116
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF4 MUTATED       16      4      2
  TM7SF4 WILD-TYPE    237     98     87
D347V4, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1             16              237
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF4 MUTATED        2     19      3
  TM7SF4 WILD-TYPE    162    228    140
D347V5, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             19              228
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF4 MUTATED        3      9      8      0      4
  TM7SF4 WILD-TYPE    118     95     83    121    113
D347V6, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              9               95
  CLUS_3              8               83
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF4 MUTATED        2     17      5
  TM7SF4 WILD-TYPE    157    234    160
D347V7, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             17              234
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF4 MUTATED        3     12      8      0      1
  TM7SF4 WILD-TYPE    115    119    143     94     80
D347V8, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             12              119
  CLUS_3              8              143
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF4 MUTATED        1     12      3      1      5
  TM7SF4 WILD-TYPE    117    124    112     39     66
D347V9, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2             12              124
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF4 MUTATED        1     10      8      3      0
  TM7SF4 WILD-TYPE     47     99    122     98     92
D347V10, multiclass
        clus
vv       TM7SF4 MUTATED TM7SF4 WILD-TYPE
  CLUS_1              1               47
  CLUS_2             10               99
  CLUS_3              8              122
  CLUS_4              3               98
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(348) Variable = PKN2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKN2 MUTATED        1      0      4     13
  PKN2 WILD-TYPE    134     92    168    163
D348V1, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN2 MUTATED        7      3      5
  PKN2 WILD-TYPE    208    152    157
D348V2, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            3            152
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKN2 MUTATED        5      7      2      0
  PKN2 WILD-TYPE    130    117    123     60
D348V3, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN2 MUTATED        8      4      2
  PKN2 WILD-TYPE    245     98     87
D348V4, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            4             98
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN2 MUTATED        4      9      4
  PKN2 WILD-TYPE    160    238    139
D348V5, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            4            160
  CLUS_2            9            238
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN2 MUTATED        2      4      7      2      2
  PKN2 WILD-TYPE    119    100     84    119    115
D348V6, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            4            100
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN2 MUTATED        2     12      4
  PKN2 WILD-TYPE    157    239    161
D348V7, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           12            239
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN2 MUTATED        1      8      5      2      2
  PKN2 WILD-TYPE    117    123    146     92     79
D348V8, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            123
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN2 MUTATED        2      5      2      2      2
  PKN2 WILD-TYPE    116    131    113     38     69
D348V9, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN2 MUTATED        2      5      2      2      2
  PKN2 WILD-TYPE     46    104    128     99     90
D348V10, multiclass
        clus
vv       PKN2 MUTATED PKN2 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            5            104
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(349) Variable = THEMIS MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THEMIS MUTATED        1      2      0     11
  THEMIS WILD-TYPE    134     90    172    165
D349V1, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              0              172
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  THEMIS MUTATED        8      0      3
  THEMIS WILD-TYPE    207    155    159
D349V2, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THEMIS MUTATED        6      4      1      2
  THEMIS WILD-TYPE    129    120    124     58
D349V3, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  THEMIS MUTATED        8      4      1
  THEMIS WILD-TYPE    245     98     88
D349V4, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              8              245
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  THEMIS MUTATED        3      6      3
  THEMIS WILD-TYPE    161    241    140
D349V5, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THEMIS MUTATED        2      2      4      1      3
  THEMIS WILD-TYPE    119    102     87    120    114
D349V6, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  THEMIS MUTATED        1      8      5
  THEMIS WILD-TYPE    158    243    160
D349V7, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THEMIS MUTATED        3      4      5      0      2
  THEMIS WILD-TYPE    115    127    146     94     79
D349V8, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              127
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THEMIS MUTATED        1      3      3      1      3
  THEMIS WILD-TYPE    117    133    112     39     68
D349V9, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THEMIS MUTATED        2      4      3      2      0
  THEMIS WILD-TYPE     46    105    127     99     92
D349V10, multiclass
        clus
vv       THEMIS MUTATED THEMIS WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(350) Variable = GCC2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GCC2 MUTATED        1      1      5     13
  GCC2 WILD-TYPE    134     91    167    163
D350V1, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            5            167
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCC2 MUTATED        8      7      1
  GCC2 WILD-TYPE    207    148    161
D350V2, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            7            148
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GCC2 MUTATED        7      9      1      2
  GCC2 WILD-TYPE    128    115    124     58
D350V3, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            9            115
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCC2 MUTATED       11      8      0
  GCC2 WILD-TYPE    242     94     89
D350V4, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            8             94
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCC2 MUTATED        9      6      4
  GCC2 WILD-TYPE    155    241    139
D350V5, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            9            155
  CLUS_2            6            241
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCC2 MUTATED        2      0      6      6      5
  GCC2 WILD-TYPE    119    104     85    115    112
D350V6, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            6             85
  CLUS_4            6            115
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCC2 MUTATED        7     12      1
  GCC2 WILD-TYPE    152    239    164
D350V7, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            7            152
  CLUS_2           12            239
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCC2 MUTATED        1      5      8      5      1
  GCC2 WILD-TYPE    117    126    143     89     80
D350V8, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            8            143
  CLUS_4            5             89
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCC2 MUTATED        4      3      0      1      5
  GCC2 WILD-TYPE    114    133    115     39     66
D350V9, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCC2 MUTATED        2      2      5      0      4
  GCC2 WILD-TYPE     46    107    125    101     88
D350V10, multiclass
        clus
vv       GCC2 MUTATED GCC2 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            2            107
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(351) Variable = FAM70B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM70B MUTATED        2      1      0     11
  FAM70B WILD-TYPE    133     91    172    165
D351V1, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM70B MUTATED        8      0      2
  FAM70B WILD-TYPE    207    155    160
D351V2, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM70B MUTATED        6      4      1      1
  FAM70B WILD-TYPE    129    120    124     59
D351V3, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM70B MUTATED        9      2      1
  FAM70B WILD-TYPE    244    100     88
D351V4, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM70B MUTATED        2      8      3
  FAM70B WILD-TYPE    162    239    140
D351V5, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              2              162
  CLUS_2              8              239
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM70B MUTATED        0      1      9      0      3
  FAM70B WILD-TYPE    121    103     82    121    114
D351V6, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              9               82
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM70B MUTATED        0     11      3
  FAM70B WILD-TYPE    159    240    162
D351V7, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              0              159
  CLUS_2             11              240
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM70B MUTATED        0      9      3      0      2
  FAM70B WILD-TYPE    118    122    148     94     79
D351V8, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              0              118
  CLUS_2              9              122
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM70B MUTATED        0      3      1      2      2
  FAM70B WILD-TYPE    118    133    114     38     69
D351V9, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM70B MUTATED        1      4      2      1      0
  FAM70B WILD-TYPE     47    105    128    100     92
D351V10, multiclass
        clus
vv       FAM70B MUTATED FAM70B WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(352) Variable = C16ORF74 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF74 MUTATED        0      0      1      2
  C16ORF74 WILD-TYPE    135     92    171    174
D352V1, multiclass
        clus
vv       C16ORF74 MUTATED C16ORF74 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                2                174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF74 MUTATED        1      0      1
  C16ORF74 WILD-TYPE    214    155    161
D352V2, multiclass
[1] "Remove cluster labels:" "C16ORF74 MUTATED"      
clus
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 2                530 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7716 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7717         TCGA-BR-7722         TCGA-BR-7723 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7851         TCGA-BR-7901         TCGA-BR-7957 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7958         TCGA-BR-7959         TCGA-BR-8058 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8059         TCGA-BR-8060         TCGA-BR-8077 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8078         TCGA-BR-8080         TCGA-BR-8081 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8285         TCGA-BR-8286 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8289         TCGA-BR-8291         TCGA-BR-8295 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8297         TCGA-BR-8360         TCGA-BR-8361 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8363         TCGA-BR-8364         TCGA-BR-8365 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8366         TCGA-BR-8367         TCGA-BR-8368 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8369         TCGA-BR-8370         TCGA-BR-8371 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8372         TCGA-BR-8373         TCGA-BR-8380 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8381         TCGA-BR-8382         TCGA-BR-8384 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8483         TCGA-BR-8484         TCGA-BR-8485 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8486         TCGA-BR-8487         TCGA-BR-8588 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8589         TCGA-BR-8590         TCGA-BR-8591 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8592         TCGA-BR-8676         TCGA-BR-8677 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8678         TCGA-BR-8679         TCGA-BR-8680 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8682         TCGA-BR-8683         TCGA-BR-8686 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8687         TCGA-BR-8690         TCGA-BR-A44T 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A44U         TCGA-BR-A452         TCGA-BR-A453 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4CQ         TCGA-BR-A4CR         TCGA-BR-A4CS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4IU         TCGA-BR-A4IV         TCGA-BR-A4IY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4IZ         TCGA-BR-A4J1         TCGA-BR-A4J2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J4         TCGA-BR-A4J5         TCGA-BR-A4J6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J7         TCGA-BR-A4J8         TCGA-BR-A4PD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4PE         TCGA-BR-A4PF         TCGA-BR-A4QI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4QL         TCGA-BR-A4QM         TCGA-CD-5798 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5799         TCGA-CD-5800         TCGA-CD-5801 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5802         TCGA-CD-5803         TCGA-CD-5804 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5813         TCGA-CD-8524         TCGA-CD-8525 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8526         TCGA-CD-8527         TCGA-CD-8528 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8529         TCGA-CD-8530         TCGA-CD-8531 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8532         TCGA-CD-8533         TCGA-CD-8534 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8535         TCGA-CD-8536         TCGA-CD-A486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A487         TCGA-CD-A489         TCGA-CD-A48A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A48C         TCGA-CD-A4MG         TCGA-CD-A4MH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A4MI         TCGA-CD-A4MJ         TCGA-CG-4437 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4441         TCGA-CG-5716         TCGA-CG-5717 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5718         TCGA-CG-5719         TCGA-CG-5720 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5721         TCGA-CG-5722         TCGA-CG-5723 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5724         TCGA-CG-5725         TCGA-CG-5726 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5727         TCGA-CG-5728         TCGA-CG-5730 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5732         TCGA-CG-5733         TCGA-CG-5734 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-5577         TCGA-D7-5578         TCGA-D7-5579 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6518         TCGA-D7-6519         TCGA-D7-6520 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6521         TCGA-D7-6522         TCGA-D7-6524 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6525         TCGA-D7-6526         TCGA-D7-6527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6528         TCGA-D7-6815         TCGA-D7-6817 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6818         TCGA-D7-6820         TCGA-D7-6822 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8570         TCGA-D7-8572         TCGA-D7-8573 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8574         TCGA-D7-8575         TCGA-D7-8576 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8578         TCGA-D7-8579         TCGA-D7-A4YT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YU         TCGA-D7-A4YV         TCGA-D7-A4YX 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YY         TCGA-D7-A4Z0         TCGA-D7-A6ET 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EV         TCGA-D7-A6EX         TCGA-D7-A6EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EZ         TCGA-D7-A6F0         TCGA-D7-A6F2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A747         TCGA-D7-A748         TCGA-D7-A74A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A74B         TCGA-EQ-5647         TCGA-EQ-8122 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-EQ-A4SO         TCGA-F1-6177         TCGA-F1-6874 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-6875         TCGA-F1-A448         TCGA-F1-A72C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-7735         TCGA-FP-7829         TCGA-FP-7916 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-7998         TCGA-FP-8099         TCGA-FP-8209 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-8210         TCGA-FP-8211         TCGA-FP-8631 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-A4BE         TCGA-FP-A4BF         TCGA-FP-A8CX 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-A9TM         TCGA-HF-7131         TCGA-HF-7132 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7133         TCGA-HF-7134         TCGA-HF-7136 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-A5NB         TCGA-HU-8238         TCGA-HU-8243 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8244         TCGA-HU-8249         TCGA-HU-8602 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8604         TCGA-HU-8608         TCGA-HU-8610 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4G2         TCGA-HU-A4G3         TCGA-HU-A4G6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4G8         TCGA-HU-A4G9         TCGA-HU-A4GC 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GD         TCGA-HU-A4GF         TCGA-HU-A4GH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GJ         TCGA-HU-A4GN         TCGA-HU-A4GP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GQ         TCGA-HU-A4GT         TCGA-HU-A4GU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GX         TCGA-HU-A4GY         TCGA-HU-A4H0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H3         TCGA-HU-A4H4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H5         TCGA-HU-A4H6         TCGA-HU-A4H8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4HB         TCGA-HU-A4HD         TCGA-IC-A6RE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IC-A6RF         TCGA-IG-A3I8         TCGA-IG-A3QL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3Y9         TCGA-IG-A3YA         TCGA-IG-A3YB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3YC         TCGA-IG-A4P3         TCGA-IG-A4QS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A4QT         TCGA-IG-A50L         TCGA-IG-A51D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A5B8         TCGA-IG-A5S3         TCGA-IG-A625 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A6QS         TCGA-IG-A7DP         TCGA-IG-A8O2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A97H         TCGA-IG-A97I         TCGA-IN-7806 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-7808         TCGA-IN-8462         TCGA-IN-8663 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RI         TCGA-IN-A6RJ         TCGA-IN-A6RL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RN         TCGA-IN-A6RO         TCGA-IN-A6RP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RR         TCGA-IN-A6RS         TCGA-IN-A7NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A7NT         TCGA-IN-A7NU         TCGA-IN-AB1V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-AB1X         TCGA-IP-7968         TCGA-JY-A6F8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FA         TCGA-JY-A6FB         TCGA-JY-A6FD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FE         TCGA-JY-A6FG         TCGA-JY-A6FH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A938         TCGA-JY-A939         TCGA-JY-A93C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A93D         TCGA-JY-A93E         TCGA-JY-A93F 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-KB-A6F5         TCGA-KB-A6F7         TCGA-KB-A93G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-KB-A93J         TCGA-KH-A6WC         TCGA-L5-A43C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43E         TCGA-L5-A43H         TCGA-L5-A43I 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43J         TCGA-L5-A43M         TCGA-L5-A4OE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OF         TCGA-L5-A4OG         TCGA-L5-A4OH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OI         TCGA-L5-A4OJ         TCGA-L5-A4OM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4ON         TCGA-L5-A4OO         TCGA-L5-A4OP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OQ         TCGA-L5-A4OR         TCGA-L5-A4OS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OT         TCGA-L5-A4OU         TCGA-L5-A4OW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OX         TCGA-L5-A88S         TCGA-L5-A88T 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A88V         TCGA-L5-A88W         TCGA-L5-A88Y 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A88Z         TCGA-L5-A891         TCGA-L5-A893 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NE         TCGA-L5-A8NF         TCGA-L5-A8NG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NH         TCGA-L5-A8NI         TCGA-L5-A8NJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NK         TCGA-L5-A8NL         TCGA-L5-A8NM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NN         TCGA-L5-A8NQ         TCGA-L5-A8NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NS         TCGA-L5-A8NT         TCGA-L5-A8NU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NV         TCGA-L5-A8NW         TCGA-L7-A56G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L7-A6VZ         TCGA-LN-A49K         TCGA-LN-A49L 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49M         TCGA-LN-A49N         TCGA-LN-A49O 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49P         TCGA-LN-A49R         TCGA-LN-A49S 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49U         TCGA-LN-A49V         TCGA-LN-A49W 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A3         TCGA-LN-A4A4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A5         TCGA-LN-A4A6         TCGA-LN-A4A8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A9         TCGA-LN-A4MQ         TCGA-LN-A4MR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A5U5         TCGA-LN-A5U6         TCGA-LN-A5U7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HV         TCGA-LN-A7HW         TCGA-LN-A7HX 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HY         TCGA-LN-A7HZ         TCGA-LN-A8HZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A8I0         TCGA-LN-A8I1         TCGA-LN-A9FO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FP         TCGA-LN-A9FQ         TCGA-LN-A9FR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-M9-A5M8         TCGA-MX-A5UG         TCGA-MX-A5UJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-MX-A663         TCGA-MX-A666         TCGA-Q9-A6FU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Q9-A6FW         TCGA-R5-A7O7         TCGA-R5-A7ZE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R5-A7ZF         TCGA-R5-A7ZI         TCGA-R5-A7ZR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R5-A804         TCGA-R5-A805         TCGA-R6-A6DN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6DQ         TCGA-R6-A6KZ         TCGA-R6-A6L4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6L6         TCGA-R6-A6XQ         TCGA-R6-A6Y0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6Y2         TCGA-R6-A8W5         TCGA-R6-A8W8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A8WC         TCGA-R6-A8WG         TCGA-RD-A7BS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7BT         TCGA-RD-A7BW         TCGA-RD-A7C1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8MV         TCGA-RD-A8MW         TCGA-RD-A8N0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8N1         TCGA-RD-A8N2         TCGA-RD-A8N4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8N5         TCGA-RD-A8N6         TCGA-RD-A8N9 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RE-A7BO         TCGA-S8-A6BV         TCGA-S8-A6BW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-SW-A7EA         TCGA-SW-A7EB         TCGA-V5-A7RB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-V5-A7RC         TCGA-V5-A7RE         TCGA-V5-AASV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-V5-AASW         TCGA-V5-AASX         TCGA-VQ-A8DL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8DT         TCGA-VQ-A8DU         TCGA-VQ-A8DV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8DZ         TCGA-VQ-A8E2         TCGA-VQ-A8E7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8P2         TCGA-VQ-A8P3         TCGA-VQ-A8PE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8PK         TCGA-VQ-A8PM         TCGA-VQ-A8PQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A91Q         TCGA-VQ-A91U         TCGA-VQ-A91V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A92D         TCGA-VQ-A94T         TCGA-VQ-AA64 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA68         TCGA-VQ-AA69         TCGA-VQ-AA6A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6B         TCGA-VQ-AA6F         TCGA-VQ-AA6G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6I         TCGA-VQ-AA6J         TCGA-VQ-AA6K 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EO         TCGA-VR-A8EP         TCGA-VR-A8EQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8ER         TCGA-VR-A8ET         TCGA-VR-A8EU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EW         TCGA-VR-A8EX         TCGA-VR-A8EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EZ         TCGA-VR-A8Q7         TCGA-VR-AA4D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA4G         TCGA-VR-AA7B         TCGA-VR-AA7D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA7I         TCGA-X8-AAAR         TCGA-XP-A8T6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-XP-A8T7         TCGA-XP-A8T8         TCGA-Z6-A8JD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Z6-A8JE         TCGA-Z6-A9VB         TCGA-Z6-AAPN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-ZA-A8F6         TCGA-ZR-A9CJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF74 MUTATED        1      1      0      0
  C16ORF74 WILD-TYPE    134    123    125     60
D352V3, multiclass
[1] "Remove cluster labels:" "C16ORF74 MUTATED"      
clus
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 2                442 
        TCGA-2H-A9GF         TCGA-2H-A9GI         TCGA-2H-A9GL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GQ         TCGA-2H-A9GR         TCGA-B7-5816 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-5818         TCGA-B7-A5TI         TCGA-B7-A5TJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-A5TK         TCGA-B7-A5TN         TCGA-BR-4183 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4184         TCGA-BR-4187         TCGA-BR-4188 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4191         TCGA-BR-4201         TCGA-BR-4253 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4255         TCGA-BR-4256         TCGA-BR-4257 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4267         TCGA-BR-4279         TCGA-BR-4280 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4292         TCGA-BR-4294         TCGA-BR-4357 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4362         TCGA-BR-4363         TCGA-BR-4366 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4368         TCGA-BR-4369         TCGA-BR-4370 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4371         TCGA-BR-6452         TCGA-BR-6453 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6454         TCGA-BR-6455         TCGA-BR-6456 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6457         TCGA-BR-6458         TCGA-BR-6564 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7715         TCGA-BR-7716         TCGA-BR-7717 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7722         TCGA-BR-7723         TCGA-BR-7851 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7901         TCGA-BR-7957         TCGA-BR-7958 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7959         TCGA-BR-8058         TCGA-BR-8059 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8060         TCGA-BR-8080         TCGA-BR-8081 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8285         TCGA-BR-8286 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8289         TCGA-BR-8291         TCGA-BR-8295 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8297         TCGA-BR-8360         TCGA-BR-8361 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8363         TCGA-BR-8364         TCGA-BR-8365 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8366         TCGA-BR-8367         TCGA-BR-8368 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8369         TCGA-BR-8370         TCGA-BR-8371 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8372         TCGA-BR-8380         TCGA-BR-8381 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8484         TCGA-BR-8485         TCGA-BR-8486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8588         TCGA-BR-8589         TCGA-BR-8590 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8591         TCGA-BR-8592         TCGA-BR-8676 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8677         TCGA-BR-8678         TCGA-BR-8679 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8680         TCGA-BR-8682         TCGA-BR-8683 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8686         TCGA-BR-8687         TCGA-BR-8690 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A44T         TCGA-BR-A44U         TCGA-BR-A452 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A453         TCGA-BR-A4CQ         TCGA-BR-A4CR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4CS         TCGA-BR-A4IU         TCGA-BR-A4IV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4IY         TCGA-BR-A4IZ         TCGA-BR-A4J1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J2         TCGA-BR-A4J4         TCGA-BR-A4J5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J6         TCGA-BR-A4J7         TCGA-BR-A4J8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4PD         TCGA-BR-A4PE         TCGA-BR-A4PF 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4QI         TCGA-BR-A4QL         TCGA-BR-A4QM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5798         TCGA-CD-5799         TCGA-CD-5800 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5801         TCGA-CD-5802         TCGA-CD-5803 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5804         TCGA-CD-5813         TCGA-CD-8524 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8525         TCGA-CD-8526         TCGA-CD-8527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8528         TCGA-CD-8529         TCGA-CD-8530 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8531         TCGA-CD-8532         TCGA-CD-8533 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8534         TCGA-CD-8535         TCGA-CD-8536 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A486         TCGA-CD-A487         TCGA-CD-A489 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A48A         TCGA-CD-A48C         TCGA-CD-A4MG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A4MH         TCGA-CD-A4MI         TCGA-CD-A4MJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4300         TCGA-CG-4301         TCGA-CG-4304 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4305         TCGA-CG-4306         TCGA-CG-4436 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4437         TCGA-CG-4438         TCGA-CG-4442 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4443         TCGA-CG-4444         TCGA-CG-4449 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4455         TCGA-CG-4460         TCGA-CG-4465 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4466         TCGA-CG-4469         TCGA-CG-4474 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4475         TCGA-CG-4476         TCGA-CG-4477 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5716         TCGA-CG-5717         TCGA-CG-5718 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5719         TCGA-CG-5720         TCGA-CG-5721 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5723         TCGA-CG-5724         TCGA-CG-5725 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5726         TCGA-CG-5727         TCGA-CG-5728 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5730         TCGA-CG-5732         TCGA-CG-5733 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5734         TCGA-D7-5577         TCGA-D7-5578 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-5579         TCGA-D7-6518         TCGA-D7-6519 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6520         TCGA-D7-6521         TCGA-D7-6522 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6524         TCGA-D7-6525         TCGA-D7-6527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6528         TCGA-D7-6815         TCGA-D7-6817 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6818         TCGA-D7-6820         TCGA-D7-6822 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8570         TCGA-D7-8572         TCGA-D7-8573 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8574         TCGA-D7-8575         TCGA-D7-8578 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YT         TCGA-D7-A4YU         TCGA-D7-A4YV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YX         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EV         TCGA-D7-A6EX         TCGA-D7-A6EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EZ         TCGA-D7-A6F0         TCGA-D7-A748 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-EQ-A4SO         TCGA-F1-6177 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-6874         TCGA-F1-6875         TCGA-F1-A448 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-A72C         TCGA-FP-7916         TCGA-FP-7998 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7131         TCGA-HF-7132         TCGA-HF-7133 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7134         TCGA-HF-7136         TCGA-HF-A5NB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8602         TCGA-HU-8608         TCGA-HU-8610 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GF         TCGA-HU-A4GQ         TCGA-HU-A4GT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GU         TCGA-HU-A4GX         TCGA-HU-A4GY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H3         TCGA-HU-A4H4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H5         TCGA-HU-A4HD         TCGA-IC-A6RE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IC-A6RF         TCGA-IG-A3I8         TCGA-IG-A3QL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3Y9         TCGA-IG-A3YA         TCGA-IG-A3YB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3YC         TCGA-IG-A4P3         TCGA-IG-A4QS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A4QT         TCGA-IG-A50L         TCGA-IG-A51D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A5B8         TCGA-IG-A5S3         TCGA-IG-A625 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A6QS         TCGA-IG-A8O2         TCGA-IG-A97H 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A97I         TCGA-IN-7806         TCGA-IN-7808 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-8462         TCGA-IN-8663         TCGA-IN-A6RI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RL         TCGA-IN-A6RN         TCGA-IN-A6RO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RR         TCGA-IN-A6RS         TCGA-IN-A7NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A7NT         TCGA-IN-A7NU         TCGA-IN-AB1V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-AB1X         TCGA-IP-7968         TCGA-JY-A6F8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FA         TCGA-JY-A6FB         TCGA-JY-A6FD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FE         TCGA-JY-A6FG         TCGA-JY-A939 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A93E         TCGA-JY-A93F         TCGA-KB-A6F5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-KB-A93G         TCGA-L5-A43C         TCGA-L5-A43E 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OJ         TCGA-L5-A4ON         TCGA-L5-A4OP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OQ         TCGA-L5-A4OR         TCGA-L5-A4OS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OT         TCGA-L5-A4OU         TCGA-L5-A4OW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OX         TCGA-L5-A88W         TCGA-L5-A891 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NE         TCGA-L5-A8NF         TCGA-L5-A8NI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NJ         TCGA-L5-A8NK         TCGA-L5-A8NL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NQ         TCGA-L5-A8NS         TCGA-L5-A8NT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NV         TCGA-L5-A8NW         TCGA-L7-A56G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L7-A6VZ         TCGA-LN-A49K         TCGA-LN-A49L 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49M         TCGA-LN-A49N         TCGA-LN-A49O 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49P         TCGA-LN-A49R         TCGA-LN-A49S 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49U         TCGA-LN-A49V         TCGA-LN-A49W 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A3         TCGA-LN-A4A4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A5         TCGA-LN-A4A6         TCGA-LN-A4A8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A9         TCGA-LN-A4MQ         TCGA-LN-A4MR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A5U5         TCGA-LN-A5U6         TCGA-LN-A5U7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7BS         TCGA-RD-A7BT         TCGA-RD-A7BW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7C1         TCGA-RD-A8MV         TCGA-RD-A8MW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8N0         TCGA-RD-A8N1         TCGA-RE-A7BO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-S8-A6BV         TCGA-S8-A6BW         TCGA-SW-A7EA 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-SW-A7EB         TCGA-VQ-A8DL         TCGA-VQ-A8DT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8DU         TCGA-VQ-A8E2         TCGA-VQ-A8E7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8P2         TCGA-VQ-A8P3         TCGA-VQ-A8PE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8PK         TCGA-VQ-A8PM         TCGA-VQ-A8PQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A91U         TCGA-VQ-A91V         TCGA-VQ-A92D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA64         TCGA-VQ-AA69         TCGA-VQ-AA6A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6B         TCGA-VQ-AA6F         TCGA-VQ-AA6G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6I         TCGA-VQ-AA6K         TCGA-VR-A8EO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EP         TCGA-VR-A8EQ         TCGA-VR-A8Q7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA4D         TCGA-VR-AA7B         TCGA-X8-AAAR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-XP-A8T6         TCGA-XP-A8T7         TCGA-Z6-A8JD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Z6-A8JE         TCGA-Z6-A9VB         TCGA-Z6-AAPN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-ZA-A8F6 
"C16ORF74 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF74 MUTATED        1      1      0
  C16ORF74 WILD-TYPE    252    101     89
D352V4, multiclass
[1] "Remove cluster labels:" "C16ORF74 MUTATED"      
clus
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 2                442 
        TCGA-2H-A9GF         TCGA-2H-A9GI         TCGA-2H-A9GL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GQ         TCGA-2H-A9GR         TCGA-B7-5816 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-5818         TCGA-B7-A5TI         TCGA-B7-A5TJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-A5TK         TCGA-B7-A5TN         TCGA-BR-4183 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4184         TCGA-BR-4187         TCGA-BR-4188 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4191         TCGA-BR-4201         TCGA-BR-4253 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4255         TCGA-BR-4256         TCGA-BR-4257 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4267         TCGA-BR-4279         TCGA-BR-4280 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4292         TCGA-BR-4294         TCGA-BR-4357 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4362         TCGA-BR-4363         TCGA-BR-4366 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4368         TCGA-BR-4369         TCGA-BR-4370 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-4371         TCGA-BR-6452         TCGA-BR-6453 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6454         TCGA-BR-6455         TCGA-BR-6456 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6457         TCGA-BR-6458         TCGA-BR-6564 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7715         TCGA-BR-7716         TCGA-BR-7717 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7722         TCGA-BR-7723         TCGA-BR-7851 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7901         TCGA-BR-7957         TCGA-BR-7958 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7959         TCGA-BR-8058         TCGA-BR-8059 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8060         TCGA-BR-8080         TCGA-BR-8081 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8285         TCGA-BR-8286 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8289         TCGA-BR-8291         TCGA-BR-8295 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8297         TCGA-BR-8360         TCGA-BR-8361 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8363         TCGA-BR-8364         TCGA-BR-8365 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8366         TCGA-BR-8367         TCGA-BR-8368 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8369         TCGA-BR-8370         TCGA-BR-8371 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8372         TCGA-BR-8380         TCGA-BR-8381 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8484         TCGA-BR-8485         TCGA-BR-8486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8588         TCGA-BR-8589         TCGA-BR-8590 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8591         TCGA-BR-8592         TCGA-BR-8676 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8677         TCGA-BR-8678         TCGA-BR-8679 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8680         TCGA-BR-8682         TCGA-BR-8683 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8686         TCGA-BR-8687         TCGA-BR-8690 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A44T         TCGA-BR-A44U         TCGA-BR-A452 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A453         TCGA-BR-A4CQ         TCGA-BR-A4CR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4CS         TCGA-BR-A4IU         TCGA-BR-A4IV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4IY         TCGA-BR-A4IZ         TCGA-BR-A4J1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J2         TCGA-BR-A4J4         TCGA-BR-A4J5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J6         TCGA-BR-A4J7         TCGA-BR-A4J8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4PD         TCGA-BR-A4PE         TCGA-BR-A4PF 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4QI         TCGA-BR-A4QL         TCGA-BR-A4QM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5798         TCGA-CD-5799         TCGA-CD-5800 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5801         TCGA-CD-5802         TCGA-CD-5803 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5804         TCGA-CD-5813         TCGA-CD-8524 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8525         TCGA-CD-8526         TCGA-CD-8527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8528         TCGA-CD-8529         TCGA-CD-8530 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8531         TCGA-CD-8532         TCGA-CD-8533 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8534         TCGA-CD-8535         TCGA-CD-8536 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A486         TCGA-CD-A487         TCGA-CD-A489 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A48A         TCGA-CD-A48C         TCGA-CD-A4MG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A4MH         TCGA-CD-A4MI         TCGA-CD-A4MJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4300         TCGA-CG-4301         TCGA-CG-4304 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4305         TCGA-CG-4306         TCGA-CG-4436 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4437         TCGA-CG-4438         TCGA-CG-4442 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4443         TCGA-CG-4444         TCGA-CG-4449 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4455         TCGA-CG-4460         TCGA-CG-4465 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4466         TCGA-CG-4469         TCGA-CG-4474 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4475         TCGA-CG-4476         TCGA-CG-4477 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5716         TCGA-CG-5717         TCGA-CG-5718 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5719         TCGA-CG-5720         TCGA-CG-5721 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5723         TCGA-CG-5724         TCGA-CG-5725 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5726         TCGA-CG-5727         TCGA-CG-5728 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5730         TCGA-CG-5732         TCGA-CG-5733 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5734         TCGA-D7-5577         TCGA-D7-5578 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-5579         TCGA-D7-6518         TCGA-D7-6519 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6520         TCGA-D7-6521         TCGA-D7-6522 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6524         TCGA-D7-6525         TCGA-D7-6527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6528         TCGA-D7-6815         TCGA-D7-6817 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6818         TCGA-D7-6820         TCGA-D7-6822 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8570         TCGA-D7-8572         TCGA-D7-8573 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8574         TCGA-D7-8575         TCGA-D7-8578 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YT         TCGA-D7-A4YU         TCGA-D7-A4YV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YX         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EV         TCGA-D7-A6EX         TCGA-D7-A6EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EZ         TCGA-D7-A6F0         TCGA-D7-A748 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-EQ-A4SO         TCGA-F1-6177 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-6874         TCGA-F1-6875         TCGA-F1-A448 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-A72C         TCGA-FP-7916         TCGA-FP-7998 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7131         TCGA-HF-7132         TCGA-HF-7133 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7134         TCGA-HF-7136         TCGA-HF-A5NB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8602         TCGA-HU-8608         TCGA-HU-8610 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GF         TCGA-HU-A4GQ         TCGA-HU-A4GT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GU         TCGA-HU-A4GX         TCGA-HU-A4GY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H3         TCGA-HU-A4H4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H5         TCGA-HU-A4HD         TCGA-IC-A6RE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IC-A6RF         TCGA-IG-A3I8         TCGA-IG-A3QL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3Y9         TCGA-IG-A3YA         TCGA-IG-A3YB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3YC         TCGA-IG-A4P3         TCGA-IG-A4QS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A4QT         TCGA-IG-A50L         TCGA-IG-A51D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A5B8         TCGA-IG-A5S3         TCGA-IG-A625 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A6QS         TCGA-IG-A8O2         TCGA-IG-A97H 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A97I         TCGA-IN-7806         TCGA-IN-7808 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-8462         TCGA-IN-8663         TCGA-IN-A6RI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RL         TCGA-IN-A6RN         TCGA-IN-A6RO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RR         TCGA-IN-A6RS         TCGA-IN-A7NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A7NT         TCGA-IN-A7NU         TCGA-IN-AB1V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-AB1X         TCGA-IP-7968         TCGA-JY-A6F8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FA         TCGA-JY-A6FB         TCGA-JY-A6FD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FE         TCGA-JY-A6FG         TCGA-JY-A939 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A93E         TCGA-JY-A93F         TCGA-KB-A6F5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-KB-A93G         TCGA-L5-A43C         TCGA-L5-A43E 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OJ         TCGA-L5-A4ON         TCGA-L5-A4OP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OQ         TCGA-L5-A4OR         TCGA-L5-A4OS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OT         TCGA-L5-A4OU         TCGA-L5-A4OW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OX         TCGA-L5-A88W         TCGA-L5-A891 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NE         TCGA-L5-A8NF         TCGA-L5-A8NI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NJ         TCGA-L5-A8NK         TCGA-L5-A8NL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NQ         TCGA-L5-A8NS         TCGA-L5-A8NT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NV         TCGA-L5-A8NW         TCGA-L7-A56G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L7-A6VZ         TCGA-LN-A49K         TCGA-LN-A49L 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49M         TCGA-LN-A49N         TCGA-LN-A49O 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49P         TCGA-LN-A49R         TCGA-LN-A49S 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49U         TCGA-LN-A49V         TCGA-LN-A49W 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A3         TCGA-LN-A4A4 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A5         TCGA-LN-A4A6         TCGA-LN-A4A8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A9         TCGA-LN-A4MQ         TCGA-LN-A4MR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A5U5         TCGA-LN-A5U6         TCGA-LN-A5U7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7BS         TCGA-RD-A7BT         TCGA-RD-A7BW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7C1         TCGA-RD-A8MV         TCGA-RD-A8MW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8N0         TCGA-RD-A8N1         TCGA-RE-A7BO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-S8-A6BV         TCGA-S8-A6BW         TCGA-SW-A7EA 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-SW-A7EB         TCGA-VQ-A8DL         TCGA-VQ-A8DT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8DU         TCGA-VQ-A8E2         TCGA-VQ-A8E7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8P2         TCGA-VQ-A8P3         TCGA-VQ-A8PE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8PK         TCGA-VQ-A8PM         TCGA-VQ-A8PQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A91U         TCGA-VQ-A91V         TCGA-VQ-A92D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA64         TCGA-VQ-AA69         TCGA-VQ-AA6A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6B         TCGA-VQ-AA6F         TCGA-VQ-AA6G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6I         TCGA-VQ-AA6K         TCGA-VR-A8EO 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EP         TCGA-VR-A8EQ         TCGA-VR-A8Q7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA4D         TCGA-VR-AA7B         TCGA-X8-AAAR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-XP-A8T6         TCGA-XP-A8T7         TCGA-Z6-A8JD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Z6-A8JE         TCGA-Z6-A9VB         TCGA-Z6-AAPN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-ZA-A8F6 
"C16ORF74 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF74 MUTATED        0      2      1
  C16ORF74 WILD-TYPE    164    245    142
D352V5, multiclass
        clus
vv       C16ORF74 MUTATED C16ORF74 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                2                245
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF74 MUTATED        1      1      1      0      0
  C16ORF74 WILD-TYPE    120    103     90    121    117
D352V6, multiclass
        clus
vv       C16ORF74 MUTATED C16ORF74 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                1                 90
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF74 MUTATED        0      3      0
  C16ORF74 WILD-TYPE    159    248    165
D352V7, multiclass
        clus
vv       C16ORF74 MUTATED C16ORF74 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                3                248
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF74 MUTATED        0      1      2      0      0
  C16ORF74 WILD-TYPE    118    130    149     94     81
D352V8, multiclass
        clus
vv       C16ORF74 MUTATED C16ORF74 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                130
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF74 MUTATED        0      1      0      0      0
  C16ORF74 WILD-TYPE    118    135    115     40     71
D352V9, multiclass
[1] "Remove cluster labels:" "C16ORF74 MUTATED"      
clus
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 1                479 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7717 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7723         TCGA-BR-7851         TCGA-BR-7901 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7957         TCGA-BR-7958         TCGA-BR-7959 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8058         TCGA-BR-8059         TCGA-BR-8060 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8077         TCGA-BR-8078         TCGA-BR-8080 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8286         TCGA-BR-8289 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8291         TCGA-BR-8295         TCGA-BR-8297 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8360         TCGA-BR-8361         TCGA-BR-8363 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8364         TCGA-BR-8365         TCGA-BR-8368 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8369         TCGA-BR-8370         TCGA-BR-8371 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8372         TCGA-BR-8373         TCGA-BR-8380 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8381         TCGA-BR-8382         TCGA-BR-8384 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8483         TCGA-BR-8485         TCGA-BR-8486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8487         TCGA-BR-8588         TCGA-BR-8590 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8591         TCGA-BR-8592         TCGA-BR-8676 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8677         TCGA-BR-8678         TCGA-BR-8679 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8680         TCGA-BR-8682         TCGA-BR-8683 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8687         TCGA-BR-8690         TCGA-BR-A44T 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A452         TCGA-BR-A453         TCGA-BR-A4CQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4CR         TCGA-BR-A4CS         TCGA-BR-A4IU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4IV         TCGA-BR-A4IY         TCGA-BR-A4IZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J1         TCGA-BR-A4J5         TCGA-BR-A4J6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J7         TCGA-BR-A4J8         TCGA-BR-A4PD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4QI         TCGA-BR-A4QL         TCGA-BR-A4QM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5798         TCGA-CD-5799         TCGA-CD-5800 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5801         TCGA-CD-5802         TCGA-CD-5803 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5804         TCGA-CD-5813         TCGA-CD-8524 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8525         TCGA-CD-8526         TCGA-CD-8527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8529         TCGA-CD-8530         TCGA-CD-8531 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8532         TCGA-CD-8533         TCGA-CD-8534 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8535         TCGA-CD-8536         TCGA-CD-A486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A487         TCGA-CD-A489         TCGA-CD-A48C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A4MG         TCGA-CD-A4MH         TCGA-CD-A4MI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4437         TCGA-CG-4441         TCGA-CG-4449 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5716         TCGA-CG-5717         TCGA-CG-5718 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5719         TCGA-CG-5720         TCGA-CG-5721 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5722         TCGA-CG-5723         TCGA-CG-5724 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5725         TCGA-CG-5726         TCGA-CG-5727 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5728         TCGA-CG-5730         TCGA-CG-5732 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5733         TCGA-CG-5734         TCGA-D7-5577 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-5578         TCGA-D7-5579         TCGA-D7-6518 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6519         TCGA-D7-6520         TCGA-D7-6521 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6522         TCGA-D7-6524         TCGA-D7-6525 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6526         TCGA-D7-6527         TCGA-D7-6528 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6815         TCGA-D7-6817         TCGA-D7-6818 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6820         TCGA-D7-6822         TCGA-D7-8570 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8572         TCGA-D7-8574         TCGA-D7-8575 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8576         TCGA-D7-8578         TCGA-D7-8579 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YT         TCGA-D7-A4YU         TCGA-D7-A4YV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YY         TCGA-D7-A4Z0         TCGA-D7-A6ET 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EV         TCGA-D7-A6EX         TCGA-D7-A6EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EZ         TCGA-D7-A6F0         TCGA-D7-A6F2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A747         TCGA-D7-A748         TCGA-D7-A74A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A74B         TCGA-EQ-5647         TCGA-EQ-8122 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-6177         TCGA-F1-6874         TCGA-F1-6875 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-A448         TCGA-FP-7735         TCGA-FP-7829 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-7998         TCGA-FP-8099         TCGA-FP-8209 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-8210         TCGA-FP-8211         TCGA-FP-8631 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-A4BE         TCGA-FP-A9TM         TCGA-HF-7131 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7132         TCGA-HF-7134         TCGA-HF-7136 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8238         TCGA-HU-8243         TCGA-HU-8602 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8604         TCGA-HU-8608         TCGA-HU-A4G3 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4G8         TCGA-HU-A4GC         TCGA-HU-A4GD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GF         TCGA-HU-A4GH         TCGA-HU-A4GJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GN         TCGA-HU-A4GQ         TCGA-HU-A4GT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GX         TCGA-HU-A4GY         TCGA-HU-A4H2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H4         TCGA-HU-A4H5         TCGA-HU-A4H6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H8         TCGA-HU-A4HB         TCGA-IC-A6RE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IC-A6RF         TCGA-IG-A3I8         TCGA-IG-A3QL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3Y9         TCGA-IG-A3YA         TCGA-IG-A3YB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3YC         TCGA-IG-A4P3         TCGA-IG-A4QS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A4QT         TCGA-IG-A50L         TCGA-IG-A51D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A5B8         TCGA-IG-A5S3         TCGA-IG-A625 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A6QS         TCGA-IG-A7DP         TCGA-IG-A8O2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A97H         TCGA-IG-A97I         TCGA-IN-7806 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-7808         TCGA-IN-8462         TCGA-IN-8663 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RI         TCGA-IN-A6RJ         TCGA-IN-A6RL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RN         TCGA-IN-A6RP         TCGA-IN-A7NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A7NT         TCGA-IN-A7NU         TCGA-IN-AB1V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-AB1X         TCGA-IP-7968         TCGA-JY-A6F8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FA         TCGA-JY-A6FB         TCGA-JY-A6FD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FE         TCGA-JY-A6FG         TCGA-JY-A6FH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A938         TCGA-JY-A939         TCGA-JY-A93C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A93D         TCGA-JY-A93E         TCGA-KB-A6F5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-KB-A6F7         TCGA-KB-A93J         TCGA-KH-A6WC 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43C         TCGA-L5-A43E         TCGA-L5-A43H 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43I         TCGA-L5-A43J         TCGA-L5-A43M 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OE         TCGA-L5-A4OF         TCGA-L5-A4OG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OH         TCGA-L5-A4OI         TCGA-L5-A4OM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4ON         TCGA-L5-A4OO         TCGA-L5-A4OP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OQ         TCGA-L5-A4OR         TCGA-L5-A4OS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OT         TCGA-L5-A4OU         TCGA-L5-A4OW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OX         TCGA-L5-A88S         TCGA-L5-A88T 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A88V         TCGA-L5-A88W         TCGA-L5-A88Y 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A88Z         TCGA-L5-A891         TCGA-L5-A893 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NE         TCGA-L5-A8NF         TCGA-L5-A8NG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NH         TCGA-L5-A8NI         TCGA-L5-A8NJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NK         TCGA-L5-A8NL         TCGA-L5-A8NM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NN         TCGA-L5-A8NQ         TCGA-L5-A8NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NS         TCGA-L5-A8NT         TCGA-L5-A8NU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NV         TCGA-L5-A8NW         TCGA-L7-A56G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L7-A6VZ         TCGA-LN-A49K         TCGA-LN-A49L 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49M         TCGA-LN-A49N         TCGA-LN-A49O 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49P         TCGA-LN-A49R         TCGA-LN-A49S 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49U         TCGA-LN-A49W         TCGA-LN-A49X 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49Y         TCGA-LN-A4A1         TCGA-LN-A4A2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A4         TCGA-LN-A4A5         TCGA-LN-A4A6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A8         TCGA-LN-A4A9         TCGA-LN-A4MQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4MR         TCGA-LN-A5U5         TCGA-LN-A5U6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A5U7         TCGA-LN-A7HV         TCGA-LN-A7HW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HX         TCGA-LN-A7HY         TCGA-LN-A7HZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A8HZ         TCGA-LN-A8I0         TCGA-LN-A8I1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FO         TCGA-LN-A9FP         TCGA-LN-A9FQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FR         TCGA-M9-A5M8         TCGA-MX-A5UG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-MX-A5UJ         TCGA-MX-A663         TCGA-MX-A666 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Q9-A6FU         TCGA-Q9-A6FW         TCGA-R5-A7O7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R5-A7ZE         TCGA-R5-A7ZF         TCGA-R5-A7ZI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R5-A7ZR         TCGA-R5-A804         TCGA-R5-A805 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6DN         TCGA-R6-A6DQ         TCGA-R6-A6KZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6L4         TCGA-R6-A6L6         TCGA-R6-A6XQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6Y0         TCGA-R6-A6Y2         TCGA-R6-A8W5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A8W8         TCGA-R6-A8WG         TCGA-RD-A7BS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7BW         TCGA-RD-A7C1         TCGA-RD-A8MV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8MW         TCGA-RD-A8N0         TCGA-RD-A8N1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8N5         TCGA-RD-A8N6         TCGA-RD-A8N9 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RE-A7BO         TCGA-S8-A6BV         TCGA-S8-A6BW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-SW-A7EA         TCGA-SW-A7EB         TCGA-V5-A7RB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-V5-A7RC         TCGA-V5-A7RE         TCGA-V5-AASW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-V5-AASX         TCGA-VQ-A8DL         TCGA-VQ-A8DU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8DV         TCGA-VQ-A8E2         TCGA-VQ-A8E7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8P2         TCGA-VQ-A8P3         TCGA-VQ-A8PE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8PK         TCGA-VQ-A8PM         TCGA-VQ-A8PQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A91Q         TCGA-VQ-A91U         TCGA-VQ-A91V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A92D         TCGA-VQ-A94T         TCGA-VQ-AA64 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA68         TCGA-VQ-AA69         TCGA-VQ-AA6A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6B         TCGA-VQ-AA6F         TCGA-VQ-AA6G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6I         TCGA-VQ-AA6J         TCGA-VQ-AA6K 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EO         TCGA-VR-A8EP         TCGA-VR-A8EQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8ER         TCGA-VR-A8ET         TCGA-VR-A8EU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EW         TCGA-VR-A8EX         TCGA-VR-A8EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EZ         TCGA-VR-A8Q7         TCGA-VR-AA4D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA4G         TCGA-VR-AA7B         TCGA-VR-AA7D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA7I         TCGA-X8-AAAR         TCGA-XP-A8T6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-XP-A8T7         TCGA-XP-A8T8         TCGA-Z6-A8JD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Z6-A8JE         TCGA-Z6-A9VB         TCGA-Z6-AAPN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-ZA-A8F6         TCGA-ZR-A9CJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF74 MUTATED        0      1      0      0      0
  C16ORF74 WILD-TYPE     48    108    130    101     92
D352V10, multiclass
[1] "Remove cluster labels:" "C16ORF74 MUTATED"      
clus
  C16ORF74 MUTATED C16ORF74 WILD-TYPE 
                 1                479 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7717 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7723         TCGA-BR-7851         TCGA-BR-7901 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-7957         TCGA-BR-7958         TCGA-BR-7959 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8058         TCGA-BR-8059         TCGA-BR-8060 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8077         TCGA-BR-8078         TCGA-BR-8080 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8286         TCGA-BR-8289 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8291         TCGA-BR-8295         TCGA-BR-8297 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8360         TCGA-BR-8361         TCGA-BR-8363 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8364         TCGA-BR-8365         TCGA-BR-8368 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8369         TCGA-BR-8370         TCGA-BR-8371 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8372         TCGA-BR-8373         TCGA-BR-8380 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8381         TCGA-BR-8382         TCGA-BR-8384 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8483         TCGA-BR-8485         TCGA-BR-8486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8487         TCGA-BR-8588         TCGA-BR-8590 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8591         TCGA-BR-8592         TCGA-BR-8676 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8677         TCGA-BR-8678         TCGA-BR-8679 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8680         TCGA-BR-8682         TCGA-BR-8683 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-8687         TCGA-BR-8690         TCGA-BR-A44T 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A452         TCGA-BR-A453         TCGA-BR-A4CQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4CR         TCGA-BR-A4CS         TCGA-BR-A4IU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4IV         TCGA-BR-A4IY         TCGA-BR-A4IZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J1         TCGA-BR-A4J5         TCGA-BR-A4J6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4J7         TCGA-BR-A4J8         TCGA-BR-A4PD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-BR-A4QI         TCGA-BR-A4QL         TCGA-BR-A4QM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5798         TCGA-CD-5799         TCGA-CD-5800 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5801         TCGA-CD-5802         TCGA-CD-5803 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-5804         TCGA-CD-5813         TCGA-CD-8524 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8525         TCGA-CD-8526         TCGA-CD-8527 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8529         TCGA-CD-8530         TCGA-CD-8531 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8532         TCGA-CD-8533         TCGA-CD-8534 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-8535         TCGA-CD-8536         TCGA-CD-A486 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A487         TCGA-CD-A489         TCGA-CD-A48C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CD-A4MG         TCGA-CD-A4MH         TCGA-CD-A4MI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-4437         TCGA-CG-4441         TCGA-CG-4449 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5716         TCGA-CG-5717         TCGA-CG-5718 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5719         TCGA-CG-5720         TCGA-CG-5721 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5722         TCGA-CG-5723         TCGA-CG-5724 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5725         TCGA-CG-5726         TCGA-CG-5727 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5728         TCGA-CG-5730         TCGA-CG-5732 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-CG-5733         TCGA-CG-5734         TCGA-D7-5577 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-5578         TCGA-D7-5579         TCGA-D7-6518 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6519         TCGA-D7-6520         TCGA-D7-6521 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6522         TCGA-D7-6524         TCGA-D7-6525 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6526         TCGA-D7-6527         TCGA-D7-6528 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6815         TCGA-D7-6817         TCGA-D7-6818 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-6820         TCGA-D7-6822         TCGA-D7-8570 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8572         TCGA-D7-8574         TCGA-D7-8575 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-8576         TCGA-D7-8578         TCGA-D7-8579 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YT         TCGA-D7-A4YU         TCGA-D7-A4YV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A4YY         TCGA-D7-A4Z0         TCGA-D7-A6ET 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EV         TCGA-D7-A6EX         TCGA-D7-A6EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A6EZ         TCGA-D7-A6F0         TCGA-D7-A6F2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A747         TCGA-D7-A748         TCGA-D7-A74A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-D7-A74B         TCGA-EQ-5647         TCGA-EQ-8122 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-6177         TCGA-F1-6874         TCGA-F1-6875 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-F1-A448         TCGA-FP-7735         TCGA-FP-7829 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-7998         TCGA-FP-8099         TCGA-FP-8209 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-8210         TCGA-FP-8211         TCGA-FP-8631 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-FP-A4BE         TCGA-FP-A9TM         TCGA-HF-7131 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HF-7132         TCGA-HF-7134         TCGA-HF-7136 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8238         TCGA-HU-8243         TCGA-HU-8602 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-8604         TCGA-HU-8608         TCGA-HU-A4G3 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4G8         TCGA-HU-A4GC         TCGA-HU-A4GD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GF         TCGA-HU-A4GH         TCGA-HU-A4GJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GN         TCGA-HU-A4GQ         TCGA-HU-A4GT 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4GX         TCGA-HU-A4GY         TCGA-HU-A4H2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H4         TCGA-HU-A4H5         TCGA-HU-A4H6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-HU-A4H8         TCGA-HU-A4HB         TCGA-IC-A6RE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IC-A6RF         TCGA-IG-A3I8         TCGA-IG-A3QL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3Y9         TCGA-IG-A3YA         TCGA-IG-A3YB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A3YC         TCGA-IG-A4P3         TCGA-IG-A4QS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A4QT         TCGA-IG-A50L         TCGA-IG-A51D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A5B8         TCGA-IG-A5S3         TCGA-IG-A625 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A6QS         TCGA-IG-A7DP         TCGA-IG-A8O2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IG-A97H         TCGA-IG-A97I         TCGA-IN-7806 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-7808         TCGA-IN-8462         TCGA-IN-8663 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RI         TCGA-IN-A6RJ         TCGA-IN-A6RL 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A6RN         TCGA-IN-A6RP         TCGA-IN-A7NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-A7NT         TCGA-IN-A7NU         TCGA-IN-AB1V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-IN-AB1X         TCGA-IP-7968         TCGA-JY-A6F8 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FA         TCGA-JY-A6FB         TCGA-JY-A6FD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A6FE         TCGA-JY-A6FG         TCGA-JY-A6FH 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A938         TCGA-JY-A939         TCGA-JY-A93C 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-JY-A93D         TCGA-JY-A93E         TCGA-KB-A6F5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-KB-A6F7         TCGA-KB-A93J         TCGA-KH-A6WC 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43C         TCGA-L5-A43E         TCGA-L5-A43H 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A43I         TCGA-L5-A43J         TCGA-L5-A43M 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OE         TCGA-L5-A4OF         TCGA-L5-A4OG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OH         TCGA-L5-A4OI         TCGA-L5-A4OM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4ON         TCGA-L5-A4OO         TCGA-L5-A4OP 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OQ         TCGA-L5-A4OR         TCGA-L5-A4OS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OT         TCGA-L5-A4OU         TCGA-L5-A4OW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A4OX         TCGA-L5-A88S         TCGA-L5-A88T 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A88V         TCGA-L5-A88W         TCGA-L5-A88Y 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A88Z         TCGA-L5-A891         TCGA-L5-A893 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NE         TCGA-L5-A8NF         TCGA-L5-A8NG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NH         TCGA-L5-A8NI         TCGA-L5-A8NJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NK         TCGA-L5-A8NL         TCGA-L5-A8NM 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NN         TCGA-L5-A8NQ         TCGA-L5-A8NR 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NS         TCGA-L5-A8NT         TCGA-L5-A8NU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L5-A8NV         TCGA-L5-A8NW         TCGA-L7-A56G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-L7-A6VZ         TCGA-LN-A49K         TCGA-LN-A49L 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49M         TCGA-LN-A49N         TCGA-LN-A49O 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49P         TCGA-LN-A49R         TCGA-LN-A49S 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49U         TCGA-LN-A49W         TCGA-LN-A49X 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A49Y         TCGA-LN-A4A1         TCGA-LN-A4A2 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A4         TCGA-LN-A4A5         TCGA-LN-A4A6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4A8         TCGA-LN-A4A9         TCGA-LN-A4MQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A4MR         TCGA-LN-A5U5         TCGA-LN-A5U6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A5U7         TCGA-LN-A7HV         TCGA-LN-A7HW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A7HX         TCGA-LN-A7HY         TCGA-LN-A7HZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A8HZ         TCGA-LN-A8I0         TCGA-LN-A8I1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FO         TCGA-LN-A9FP         TCGA-LN-A9FQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-LN-A9FR         TCGA-M9-A5M8         TCGA-MX-A5UG 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-MX-A5UJ         TCGA-MX-A663         TCGA-MX-A666 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Q9-A6FU         TCGA-Q9-A6FW         TCGA-R5-A7O7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R5-A7ZE         TCGA-R5-A7ZF         TCGA-R5-A7ZI 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R5-A7ZR         TCGA-R5-A804         TCGA-R5-A805 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6DN         TCGA-R6-A6DQ         TCGA-R6-A6KZ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6L4         TCGA-R6-A6L6         TCGA-R6-A6XQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A6Y0         TCGA-R6-A6Y2         TCGA-R6-A8W5 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-R6-A8W8         TCGA-R6-A8WG         TCGA-RD-A7BS 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A7BW         TCGA-RD-A7C1         TCGA-RD-A8MV 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8MW         TCGA-RD-A8N0         TCGA-RD-A8N1 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RD-A8N5         TCGA-RD-A8N6         TCGA-RD-A8N9 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-RE-A7BO         TCGA-S8-A6BV         TCGA-S8-A6BW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-SW-A7EA         TCGA-SW-A7EB         TCGA-V5-A7RB 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-V5-A7RC         TCGA-V5-A7RE         TCGA-V5-AASW 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-V5-AASX         TCGA-VQ-A8DL         TCGA-VQ-A8DU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8DV         TCGA-VQ-A8E2         TCGA-VQ-A8E7 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8P2         TCGA-VQ-A8P3         TCGA-VQ-A8PE 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A8PK         TCGA-VQ-A8PM         TCGA-VQ-A8PQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A91Q         TCGA-VQ-A91U         TCGA-VQ-A91V 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-A92D         TCGA-VQ-A94T         TCGA-VQ-AA64 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA68         TCGA-VQ-AA69         TCGA-VQ-AA6A 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6B         TCGA-VQ-AA6F         TCGA-VQ-AA6G 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VQ-AA6I         TCGA-VQ-AA6J         TCGA-VQ-AA6K 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EO         TCGA-VR-A8EP         TCGA-VR-A8EQ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8ER         TCGA-VR-A8ET         TCGA-VR-A8EU 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EW         TCGA-VR-A8EX         TCGA-VR-A8EY 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-A8EZ         TCGA-VR-A8Q7         TCGA-VR-AA4D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA4G         TCGA-VR-AA7B         TCGA-VR-AA7D 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-VR-AA7I         TCGA-X8-AAAR         TCGA-XP-A8T6 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-XP-A8T7         TCGA-XP-A8T8         TCGA-Z6-A8JD 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-Z6-A8JE         TCGA-Z6-A9VB         TCGA-Z6-AAPN 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 
        TCGA-ZA-A8F6         TCGA-ZR-A9CJ 
"C16ORF74 WILD-TYPE" "C16ORF74 WILD-TYPE" 

Clustering(353) Variable = ACVR1B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACVR1B MUTATED        2      1      3      9
  ACVR1B WILD-TYPE    133     91    169    167
D353V1, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACVR1B MUTATED        8      2      2
  ACVR1B WILD-TYPE    207    153    160
D353V2, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              8              207
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACVR1B MUTATED        6      7      1      1
  ACVR1B WILD-TYPE    129    117    124     59
D353V3, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              6              129
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACVR1B MUTATED       11      3      1
  ACVR1B WILD-TYPE    242     99     88
D353V4, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1             11              242
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACVR1B MUTATED        2     10      1
  ACVR1B WILD-TYPE    162    237    142
D353V5, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              2              162
  CLUS_2             10              237
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACVR1B MUTATED        0      3      7      3      0
  ACVR1B WILD-TYPE    121    101     84    118    117
D353V6, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              3              118
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACVR1B MUTATED        2     10      3
  ACVR1B WILD-TYPE    157    241    162
D353V7, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              2              157
  CLUS_2             10              241
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACVR1B MUTATED        1      5      7      1      1
  ACVR1B WILD-TYPE    117    126    144     93     80
D353V8, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              7              144
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACVR1B MUTATED        1      5      2      1      3
  ACVR1B WILD-TYPE    117    131    113     39     68
D353V9, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACVR1B MUTATED        0      5      4      2      1
  ACVR1B WILD-TYPE     48    104    126     99     91
D353V10, multiclass
        clus
vv       ACVR1B MUTATED ACVR1B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(354) Variable = C2CD3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2CD3 MUTATED        4      5      4     17
  C2CD3 WILD-TYPE    131     87    168    159
D354V1, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5              87
  CLUS_3             4             168
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  C2CD3 MUTATED       16      4      5
  C2CD3 WILD-TYPE    199    151    157
D354V2, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             4             151
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2CD3 MUTATED        9      8      2      7
  C2CD3 WILD-TYPE    126    116    123     53
D354V3, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             8             116
  CLUS_3             2             123
  CLUS_4             7              53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  C2CD3 MUTATED       19      5      2
  C2CD3 WILD-TYPE    234     97     87
D354V4, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1            19             234
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  C2CD3 MUTATED        9     16      4
  C2CD3 WILD-TYPE    155    231    139
D354V5, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             9             155
  CLUS_2            16             231
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2CD3 MUTATED        3      5     10      6      5
  C2CD3 WILD-TYPE    118     99     81    115    112
D354V6, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3            10              81
  CLUS_4             6             115
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  C2CD3 MUTATED        5     18      7
  C2CD3 WILD-TYPE    154    233    158
D354V7, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            18             233
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2CD3 MUTATED        1     15      9      3      2
  C2CD3 WILD-TYPE    117    116    142     91     79
D354V8, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            15             116
  CLUS_3             9             142
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2CD3 MUTATED        3     11      4      4      1
  C2CD3 WILD-TYPE    115    125    111     36     70
D354V9, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            11             125
  CLUS_3             4             111
  CLUS_4             4              36
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2CD3 MUTATED        2     11      7      0      3
  C2CD3 WILD-TYPE     46     98    123    101     89
D354V10, multiclass
        clus
vv       C2CD3 MUTATED C2CD3 WILD-TYPE
  CLUS_1             2              46
  CLUS_2            11              98
  CLUS_3             7             123
  CLUS_4             0             101
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(355) Variable = MASTL MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MASTL MUTATED        4      1      2     10
  MASTL WILD-TYPE    131     91    170    166
D355V1, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MASTL MUTATED        9      0      7
  MASTL WILD-TYPE    206    155    155
D355V2, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MASTL MUTATED        7      6      2      1
  MASTL WILD-TYPE    128    118    123     59
D355V3, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             7             128
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MASTL MUTATED       11      3      2
  MASTL WILD-TYPE    242     99     87
D355V4, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MASTL MUTATED        4      8      4
  MASTL WILD-TYPE    160    239    139
D355V5, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             4             160
  CLUS_2             8             239
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MASTL MUTATED        3      4      4      1      4
  MASTL WILD-TYPE    118    100     87    120    113
D355V6, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MASTL MUTATED        2     12      3
  MASTL WILD-TYPE    157    239    162
D355V7, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             2             157
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MASTL MUTATED        3      6      7      0      1
  MASTL WILD-TYPE    115    125    144     94     80
D355V8, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MASTL MUTATED        3      5      0      2      6
  MASTL WILD-TYPE    115    131    115     38     65
D355V9, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MASTL MUTATED        2      6      6      2      0
  MASTL WILD-TYPE     46    103    124     99     92
D355V10, multiclass
        clus
vv       MASTL MUTATED MASTL WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(356) Variable = CASP7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASP7 MUTATED        0      1      1      3
  CASP7 WILD-TYPE    135     91    171    173
D356V1, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP7 MUTATED        4      0      1
  CASP7 WILD-TYPE    211    155    161
D356V2, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASP7 MUTATED        2      2      0      1
  CASP7 WILD-TYPE    133    122    125     59
D356V3, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP7 MUTATED        4      0      1
  CASP7 WILD-TYPE    249    102     88
D356V4, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP7 MUTATED        1      3      1
  CASP7 WILD-TYPE    163    244    142
D356V5, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP7 MUTATED        0      1      2      1      1
  CASP7 WILD-TYPE    121    103     89    120    116
D356V6, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CASP7 MUTATED        0      5      0
  CASP7 WILD-TYPE    159    246    165
D356V7, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP7 MUTATED        0      3      2      0      0
  CASP7 WILD-TYPE    118    128    149     94     81
D356V8, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP7 MUTATED        0      3      0      0      2
  CASP7 WILD-TYPE    118    133    115     40     69
D356V9, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASP7 MUTATED        0      3      2      0      0
  CASP7 WILD-TYPE     48    106    128    101     92
D356V10, multiclass
        clus
vv       CASP7 MUTATED CASP7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(357) Variable = HIAT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIAT1 MUTATED        0      1      3      7
  HIAT1 WILD-TYPE    135     91    169    169
D357V1, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HIAT1 MUTATED        5      2      1
  HIAT1 WILD-TYPE    210    153    161
D357V2, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIAT1 MUTATED        6      3      1      0
  HIAT1 WILD-TYPE    129    121    124     60
D357V3, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HIAT1 MUTATED        8      1      1
  HIAT1 WILD-TYPE    245    101     88
D357V4, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HIAT1 MUTATED        3      4      2
  HIAT1 WILD-TYPE    161    243    141
D357V5, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIAT1 MUTATED        1      1      5      1      1
  HIAT1 WILD-TYPE    120    103     86    120    116
D357V6, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HIAT1 MUTATED        1      9      1
  HIAT1 WILD-TYPE    158    242    164
D357V7, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIAT1 MUTATED        0      3      6      1      1
  HIAT1 WILD-TYPE    118    128    145     93     80
D357V8, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIAT1 MUTATED        1      3      1      1      2
  HIAT1 WILD-TYPE    117    133    114     39     69
D357V9, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIAT1 MUTATED        1      2      4      0      1
  HIAT1 WILD-TYPE     47    107    126    101     91
D357V10, multiclass
        clus
vv       HIAT1 MUTATED HIAT1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(358) Variable = FAM116A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM116A MUTATED        0      1      1      8
  FAM116A WILD-TYPE    135     91    171    168
D358V1, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM116A MUTATED        3      2      2
  FAM116A WILD-TYPE    212    153    160
D358V2, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               3               212
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM116A MUTATED        7      3      0      0
  FAM116A WILD-TYPE    128    121    125     60
D358V3, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               7               128
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM116A MUTATED        8      2      0
  FAM116A WILD-TYPE    245    100     89
D358V4, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               8               245
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM116A MUTATED        4      4      2
  FAM116A WILD-TYPE    160    243    141
D358V5, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               4               160
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM116A MUTATED        0      3      4      1      2
  FAM116A WILD-TYPE    121    101     87    120    115
D358V6, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               0               121
  CLUS_2               3               101
  CLUS_3               4                87
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM116A MUTATED        1      7      2
  FAM116A WILD-TYPE    158    244    163
D358V7, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               1               158
  CLUS_2               7               244
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM116A MUTATED        0      5      3      1      1
  FAM116A WILD-TYPE    118    126    148     93     80
D358V8, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               126
  CLUS_3               3               148
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM116A MUTATED        1      3      1      1      0
  FAM116A WILD-TYPE    117    133    114     39     71
D358V9, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM116A MUTATED        1      2      1      1      1
  FAM116A WILD-TYPE     47    107    129    100     91
D358V10, multiclass
        clus
vv       FAM116A MUTATED FAM116A WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(359) Variable = ERBB3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERBB3 MUTATED        4      3      8     26
  ERBB3 WILD-TYPE    131     89    164    150
D359V1, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3              89
  CLUS_3             8             164
  CLUS_4            26             150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB3 MUTATED       20      4     10
  ERBB3 WILD-TYPE    195    151    152
D359V2, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1            20             195
  CLUS_2             4             151
  CLUS_3            10             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERBB3 MUTATED        9     15      5      5
  ERBB3 WILD-TYPE    126    109    120     55
D359V3, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             9             126
  CLUS_2            15             109
  CLUS_3             5             120
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB3 MUTATED       19     10      5
  ERBB3 WILD-TYPE    234     92     84
D359V4, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1            19             234
  CLUS_2            10              92
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB3 MUTATED        8     19     13
  ERBB3 WILD-TYPE    156    228    130
D359V5, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             8             156
  CLUS_2            19             228
  CLUS_3            13             130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB3 MUTATED        3      7     15      4     11
  ERBB3 WILD-TYPE    118     97     76    117    106
D359V6, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             7              97
  CLUS_3            15              76
  CLUS_4             4             117
  CLUS_5            11             106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ERBB3 MUTATED        4     23     14
  ERBB3 WILD-TYPE    155    228    151
D359V7, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            23             228
  CLUS_3            14             151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB3 MUTATED        5     11     14      4      7
  ERBB3 WILD-TYPE    113    120    137     90     74
D359V8, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            11             120
  CLUS_3            14             137
  CLUS_4             4              90
  CLUS_5             7              74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB3 MUTATED        1     11      7      3      9
  ERBB3 WILD-TYPE    117    125    108     37     62
D359V9, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            11             125
  CLUS_3             7             108
  CLUS_4             3              37
  CLUS_5             9              62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERBB3 MUTATED        0      7     15      5      4
  ERBB3 WILD-TYPE     48    102    115     96     88
D359V10, multiclass
        clus
vv       ERBB3 MUTATED ERBB3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3            15             115
  CLUS_4             5              96
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(360) Variable = NDST2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NDST2 MUTATED        4      0      2     10
  NDST2 WILD-TYPE    131     92    170    166
D360V1, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NDST2 MUTATED        7      4      1
  NDST2 WILD-TYPE    208    151    161
D360V2, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             4             151
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NDST2 MUTATED        7      3      0      2
  NDST2 WILD-TYPE    128    121    125     58
D360V3, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NDST2 MUTATED        9      3      0
  NDST2 WILD-TYPE    244     99     89
D360V4, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NDST2 MUTATED        8      6      2
  NDST2 WILD-TYPE    156    241    141
D360V5, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             8             156
  CLUS_2             6             241
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NDST2 MUTATED        2      2      6      4      2
  NDST2 WILD-TYPE    119    102     85    117    115
D360V6, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             4             117
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NDST2 MUTATED        6      9      1
  NDST2 WILD-TYPE    153    242    164
D360V7, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             6             153
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NDST2 MUTATED        2      7      4      3      0
  NDST2 WILD-TYPE    116    124    147     91     81
D360V8, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             3              91
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NDST2 MUTATED        2      5      0      2      4
  NDST2 WILD-TYPE    116    131    115     38     67
D360V9, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NDST2 MUTATED        0      4      4      2      3
  NDST2 WILD-TYPE     48    105    126     99     89
D360V10, multiclass
        clus
vv       NDST2 MUTATED NDST2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(361) Variable = RB1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        4      4      3     10
  RB1 WILD-TYPE    131     88    169    166
D361V1, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           4           131
  CLUS_2           4            88
  CLUS_3           3           169
  CLUS_4          10           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        8      5      5
  RB1 WILD-TYPE    207    150    157
D361V2, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           8           207
  CLUS_2           5           150
  CLUS_3           5           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RB1 MUTATED        8      5      2      4
  RB1 WILD-TYPE    127    119    123     56
D361V3, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           8           127
  CLUS_2           5           119
  CLUS_3           2           123
  CLUS_4           4            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED       13      4      2
  RB1 WILD-TYPE    240     98     87
D361V4, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1          13           240
  CLUS_2           4            98
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        6      8      7
  RB1 WILD-TYPE    158    239    136
D361V5, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           6           158
  CLUS_2           8           239
  CLUS_3           7           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1 MUTATED        5      1      4      5      6
  RB1 WILD-TYPE    116    103     87    116    111
D361V6, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           5           116
  CLUS_2           1           103
  CLUS_3           4            87
  CLUS_4           5           116
  CLUS_5           6           111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RB1 MUTATED        7      9      5
  RB1 WILD-TYPE    152    242    160
D361V7, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           7           152
  CLUS_2           9           242
  CLUS_3           5           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1 MUTATED        4      4      8      4      1
  RB1 WILD-TYPE    114    127    143     90     80
D361V8, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           4           114
  CLUS_2           4           127
  CLUS_3           8           143
  CLUS_4           4            90
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1 MUTATED        5      2      0      4      5
  RB1 WILD-TYPE    113    134    115     36     66
D361V9, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           5           113
  CLUS_2           2           134
  CLUS_3           0           115
  CLUS_4           4            36
  CLUS_5           5            66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RB1 MUTATED        3      2      7      0      4
  RB1 WILD-TYPE     45    107    123    101     88
D361V10, multiclass
        clus
vv       RB1 MUTATED RB1 WILD-TYPE
  CLUS_1           3            45
  CLUS_2           2           107
  CLUS_3           7           123
  CLUS_4           0           101
  CLUS_5           4            88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(362) Variable = GNAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GNAS MUTATED        7      5     12     24
  GNAS WILD-TYPE    128     87    160    152
D362V1, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1            7            128
  CLUS_2            5             87
  CLUS_3           12            160
  CLUS_4           24            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GNAS MUTATED       28     11      6
  GNAS WILD-TYPE    187    144    156
D362V2, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1           28            187
  CLUS_2           11            144
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GNAS MUTATED       15     10      4     10
  GNAS WILD-TYPE    120    114    121     50
D362V3, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1           15            120
  CLUS_2           10            114
  CLUS_3            4            121
  CLUS_4           10             50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GNAS MUTATED       26      8      5
  GNAS WILD-TYPE    227     94     84
D362V4, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1           26            227
  CLUS_2            8             94
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GNAS MUTATED       12     27      8
  GNAS WILD-TYPE    152    220    135
D362V5, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1           12            152
  CLUS_2           27            220
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNAS MUTATED        5      7     17     11      7
  GNAS WILD-TYPE    116     97     74    110    110
D362V6, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1            5            116
  CLUS_2            7             97
  CLUS_3           17             74
  CLUS_4           11            110
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GNAS MUTATED       11     31      7
  GNAS WILD-TYPE    148    220    158
D362V7, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1           11            148
  CLUS_2           31            220
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNAS MUTATED        5     17     17      8      2
  GNAS WILD-TYPE    113    114    134     86     79
D362V8, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1            5            113
  CLUS_2           17            114
  CLUS_3           17            134
  CLUS_4            8             86
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNAS MUTATED        8     16      6      5      7
  GNAS WILD-TYPE    110    120    109     35     64
D362V9, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1            8            110
  CLUS_2           16            120
  CLUS_3            6            109
  CLUS_4            5             35
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNAS MUTATED        1     12     16      5      8
  GNAS WILD-TYPE     47     97    114     96     84
D362V10, multiclass
        clus
vv       GNAS MUTATED GNAS WILD-TYPE
  CLUS_1            1             47
  CLUS_2           12             97
  CLUS_3           16            114
  CLUS_4            5             96
  CLUS_5            8             84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(363) Variable = SPG11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPG11 MUTATED        1      3      5     13
  SPG11 WILD-TYPE    134     89    167    163
D363V1, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             5             167
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG11 MUTATED        9      5      4
  SPG11 WILD-TYPE    206    150    158
D363V2, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             5             150
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPG11 MUTATED        5      9      3      1
  SPG11 WILD-TYPE    130    115    122     59
D363V3, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             9             115
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG11 MUTATED       10      4      4
  SPG11 WILD-TYPE    243     98     85
D363V4, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             4              98
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG11 MUTATED        4     10      7
  SPG11 WILD-TYPE    160    237    136
D363V5, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            10             237
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG11 MUTATED        1      3      7      4      6
  SPG11 WILD-TYPE    120    101     84    117    111
D363V6, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             4             117
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPG11 MUTATED        6     12      4
  SPG11 WILD-TYPE    153    239    161
D363V7, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG11 MUTATED        1      5      9      4      3
  SPG11 WILD-TYPE    117    126    142     90     78
D363V8, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG11 MUTATED        4      6      3      1      3
  SPG11 WILD-TYPE    114    130    112     39     68
D363V9, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPG11 MUTATED        0      6      6      1      4
  SPG11 WILD-TYPE     48    103    124    100     88
D363V10, multiclass
        clus
vv       SPG11 MUTATED SPG11 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(364) Variable = FAH MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAH MUTATED        1      2      2      4
  FAH WILD-TYPE    134     90    170    172
D364V1, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           1           134
  CLUS_2           2            90
  CLUS_3           2           170
  CLUS_4           4           172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  FAH MUTATED        5      1      1
  FAH WILD-TYPE    210    154    161
D364V2, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           5           210
  CLUS_2           1           154
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAH MUTATED        4      4      1      0
  FAH WILD-TYPE    131    120    124     60
D364V3, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           4           131
  CLUS_2           4           120
  CLUS_3           1           124
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  FAH MUTATED        6      2      1
  FAH WILD-TYPE    247    100     88
D364V4, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           6           247
  CLUS_2           2           100
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  FAH MUTATED        0      6      2
  FAH WILD-TYPE    164    241    141
D364V5, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           0           164
  CLUS_2           6           241
  CLUS_3           2           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAH MUTATED        2      3      2      0      1
  FAH WILD-TYPE    119    101     89    121    116
D364V6, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           2           119
  CLUS_2           3           101
  CLUS_3           2            89
  CLUS_4           0           121
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  FAH MUTATED        1      7      1
  FAH WILD-TYPE    158    244    164
D364V7, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           1           158
  CLUS_2           7           244
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAH MUTATED        3      3      3      0      0
  FAH WILD-TYPE    115    128    148     94     81
D364V8, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           3           115
  CLUS_2           3           128
  CLUS_3           3           148
  CLUS_4           0            94
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAH MUTATED        0      3      2      0      1
  FAH WILD-TYPE    118    133    113     40     70
D364V9, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           0           118
  CLUS_2           3           133
  CLUS_3           2           113
  CLUS_4           0            40
  CLUS_5           1            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAH MUTATED        1      3      1      1      0
  FAH WILD-TYPE     47    106    129    100     92
D364V10, multiclass
        clus
vv       FAH MUTATED FAH WILD-TYPE
  CLUS_1           1            47
  CLUS_2           3           106
  CLUS_3           1           129
  CLUS_4           1           100
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(365) Variable = CNTLN MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNTLN MUTATED        8      3      7     27
  CNTLN WILD-TYPE    127     89    165    149
D365V1, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             8             127
  CLUS_2             3              89
  CLUS_3             7             165
  CLUS_4            27             149
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNTLN MUTATED       30      3      8
  CNTLN WILD-TYPE    185    152    154
D365V2, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1            30             185
  CLUS_2             3             152
  CLUS_3             8             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNTLN MUTATED       16     18      1      3
  CNTLN WILD-TYPE    119    106    124     57
D365V3, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1            16             119
  CLUS_2            18             106
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNTLN MUTATED       29      8      1
  CNTLN WILD-TYPE    224     94     88
D365V4, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1            29             224
  CLUS_2             8              94
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNTLN MUTATED        7     28     10
  CNTLN WILD-TYPE    157    219    133
D365V5, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             7             157
  CLUS_2            28             219
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNTLN MUTATED        4      7     24      3      7
  CNTLN WILD-TYPE    117     97     67    118    110
D365V6, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             4             117
  CLUS_2             7              97
  CLUS_3            24              67
  CLUS_4             3             118
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNTLN MUTATED        4     34      7
  CNTLN WILD-TYPE    155    217    158
D365V7, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             4             155
  CLUS_2            34             217
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNTLN MUTATED        4     21     17      1      2
  CNTLN WILD-TYPE    114    110    134     93     79
D365V8, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             4             114
  CLUS_2            21             110
  CLUS_3            17             134
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNTLN MUTATED        1     16      4      3     11
  CNTLN WILD-TYPE    117    120    111     37     60
D365V9, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             1             117
  CLUS_2            16             120
  CLUS_3             4             111
  CLUS_4             3              37
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNTLN MUTATED        2     15     13      4      1
  CNTLN WILD-TYPE     46     94    117     97     91
D365V10, multiclass
        clus
vv       CNTLN MUTATED CNTLN WILD-TYPE
  CLUS_1             2              46
  CLUS_2            15              94
  CLUS_3            13             117
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(366) Variable = KIAA0748 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0748 MUTATED        6      3      2      9
  KIAA0748 WILD-TYPE    129     89    170    167
D366V1, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                6                129
  CLUS_2                3                 89
  CLUS_3                2                170
  CLUS_4                9                167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0748 MUTATED       14      0      6
  KIAA0748 WILD-TYPE    201    155    156
D366V2, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1               14                201
  CLUS_2                0                155
  CLUS_3                6                156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0748 MUTATED        6      6      3      2
  KIAA0748 WILD-TYPE    129    118    122     58
D366V3, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                6                129
  CLUS_2                6                118
  CLUS_3                3                122
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0748 MUTATED       11      5      1
  KIAA0748 WILD-TYPE    242     97     88
D366V4, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1               11                242
  CLUS_2                5                 97
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0748 MUTATED        3     12      6
  KIAA0748 WILD-TYPE    161    235    137
D366V5, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               12                235
  CLUS_3                6                137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0748 MUTATED        2      7      6      2      4
  KIAA0748 WILD-TYPE    119     97     85    119    113
D366V6, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                7                 97
  CLUS_3                6                 85
  CLUS_4                2                119
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0748 MUTATED        3     15      3
  KIAA0748 WILD-TYPE    156    236    162
D366V7, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               15                236
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0748 MUTATED        2      7     10      1      1
  KIAA0748 WILD-TYPE    116    124    141     93     80
D366V8, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                7                124
  CLUS_3               10                141
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0748 MUTATED        2      6      3      4      4
  KIAA0748 WILD-TYPE    116    130    112     36     67
D366V9, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                6                130
  CLUS_3                3                112
  CLUS_4                4                 36
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0748 MUTATED        2      5      6      5      1
  KIAA0748 WILD-TYPE     46    104    124     96     91
D366V10, multiclass
        clus
vv       KIAA0748 MUTATED KIAA0748 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                5                104
  CLUS_3                6                124
  CLUS_4                5                 96
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(367) Variable = ZMYM3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYM3 MUTATED        2      4      2     13
  ZMYM3 WILD-TYPE    133     88    170    163
D367V1, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4              88
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM3 MUTATED       15      2      3
  ZMYM3 WILD-TYPE    200    153    159
D367V2, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYM3 MUTATED        4      5      3      2
  ZMYM3 WILD-TYPE    131    119    122     58
D367V3, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM3 MUTATED       10      3      1
  ZMYM3 WILD-TYPE    243     99     88
D367V4, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM3 MUTATED        4     13      5
  ZMYM3 WILD-TYPE    160    234    138
D367V5, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            13             234
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM3 MUTATED        3      5      6      4      4
  ZMYM3 WILD-TYPE    118     99     85    117    113
D367V6, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             6              85
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZMYM3 MUTATED        6     13      3
  ZMYM3 WILD-TYPE    153    238    162
D367V7, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            13             238
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM3 MUTATED        2     11      5      2      2
  ZMYM3 WILD-TYPE    116    120    146     92     79
D367V8, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            11             120
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM3 MUTATED        2      9      3      2      4
  ZMYM3 WILD-TYPE    116    127    112     38     67
D367V9, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             127
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYM3 MUTATED        1      9      7      1      2
  ZMYM3 WILD-TYPE     47    100    123    100     90
D367V10, multiclass
        clus
vv       ZMYM3 MUTATED ZMYM3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             9             100
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(368) Variable = C4ORF6 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C4ORF6 MUTATED        0      0      0     11
  C4ORF6 WILD-TYPE    135     92    172    165
D368V1, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  C4ORF6 MUTATED        8      0      2
  C4ORF6 WILD-TYPE    207    155    160
D368V2, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C4ORF6 MUTATED        5      3      0      1
  C4ORF6 WILD-TYPE    130    121    125     59
D368V3, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  C4ORF6 MUTATED        8      1      0
  C4ORF6 WILD-TYPE    245    101     89
D368V4, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  C4ORF6 MUTATED        2      5      3
  C4ORF6 WILD-TYPE    162    242    140
D368V5, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C4ORF6 MUTATED        0      1      8      0      1
  C4ORF6 WILD-TYPE    121    103     83    121    116
D368V6, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              8               83
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  C4ORF6 MUTATED        0      9      3
  C4ORF6 WILD-TYPE    159    242    162
D368V7, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              9              242
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C4ORF6 MUTATED        1      6      4      0      1
  C4ORF6 WILD-TYPE    117    125    147     94     80
D368V8, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C4ORF6 MUTATED        0      3      1      1      5
  C4ORF6 WILD-TYPE    118    133    114     39     66
D368V9, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C4ORF6 MUTATED        1      4      3      2      0
  C4ORF6 WILD-TYPE     47    105    127     99     92
D368V10, multiclass
        clus
vv       C4ORF6 MUTATED C4ORF6 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(369) Variable = DPP7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPP7 MUTATED        0      0      1     10
  DPP7 WILD-TYPE    135     92    171    166
D369V1, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPP7 MUTATED        8      0      1
  DPP7 WILD-TYPE    207    155    161
D369V2, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPP7 MUTATED        3      3      2      1
  DPP7 WILD-TYPE    132    121    123     59
D369V3, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPP7 MUTATED        6      1      2
  DPP7 WILD-TYPE    247    101     87
D369V4, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPP7 MUTATED        1      7      3
  DPP7 WILD-TYPE    163    240    140
D369V5, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPP7 MUTATED        0      1      7      1      2
  DPP7 WILD-TYPE    121    103     84    120    115
D369V6, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            7             84
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DPP7 MUTATED        0      7      4
  DPP7 WILD-TYPE    159    244    161
D369V7, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            7            244
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPP7 MUTATED        0      4      5      1      1
  DPP7 WILD-TYPE    118    127    146     93     80
D369V8, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPP7 MUTATED        0      3      3      0      2
  DPP7 WILD-TYPE    118    133    112     40     69
D369V9, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPP7 MUTATED        0      2      5      0      1
  DPP7 WILD-TYPE     48    107    125    101     91
D369V10, multiclass
        clus
vv       DPP7 MUTATED DPP7 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(370) Variable = DUSP9 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DUSP9 MUTATED        2      1      3      4
  DUSP9 WILD-TYPE    133     91    169    172
D370V1, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DUSP9 MUTATED        4      3      1
  DUSP9 WILD-TYPE    211    152    161
D370V2, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DUSP9 MUTATED        2      3      0      0
  DUSP9 WILD-TYPE    133    121    125     60
D370V3, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DUSP9 MUTATED        3      2      0
  DUSP9 WILD-TYPE    250    100     89
D370V4, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DUSP9 MUTATED        2      4      3
  DUSP9 WILD-TYPE    162    243    140
D370V5, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DUSP9 MUTATED        3      1      5      0      0
  DUSP9 WILD-TYPE    118    103     86    121    117
D370V6, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DUSP9 MUTATED        3      6      1
  DUSP9 WILD-TYPE    156    245    164
D370V7, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DUSP9 MUTATED        4      4      2      0      0
  DUSP9 WILD-TYPE    114    127    149     94     81
D370V8, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DUSP9 MUTATED        3      3      1      0      0
  DUSP9 WILD-TYPE    115    133    114     40     71
D370V9, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DUSP9 MUTATED        2      3      1      1      0
  DUSP9 WILD-TYPE     46    106    129    100     92
D370V10, multiclass
        clus
vv       DUSP9 MUTATED DUSP9 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(371) Variable = BCL9L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCL9L MUTATED        1      2      8     20
  BCL9L WILD-TYPE    134     90    164    156
D371V1, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             8             164
  CLUS_4            20             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BCL9L MUTATED       19      3      5
  BCL9L WILD-TYPE    196    152    157
D371V2, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1            19             196
  CLUS_2             3             152
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCL9L MUTATED       11     12      1      5
  BCL9L WILD-TYPE    124    112    124     55
D371V3, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1            11             124
  CLUS_2            12             112
  CLUS_3             1             124
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BCL9L MUTATED       23      5      1
  BCL9L WILD-TYPE    230     97     88
D371V4, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1            23             230
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BCL9L MUTATED        6     14      8
  BCL9L WILD-TYPE    158    233    135
D371V5, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             6             158
  CLUS_2            14             233
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL9L MUTATED        2      2     15      4      5
  BCL9L WILD-TYPE    119    102     76    117    112
D371V6, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3            15              76
  CLUS_4             4             117
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BCL9L MUTATED        5     20      6
  BCL9L WILD-TYPE    154    231    159
D371V7, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             5             154
  CLUS_2            20             231
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL9L MUTATED        4     11     10      3      3
  BCL9L WILD-TYPE    114    120    141     91     78
D371V8, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             4             114
  CLUS_2            11             120
  CLUS_3            10             141
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL9L MUTATED        3      7      4      2      9
  BCL9L WILD-TYPE    115    129    111     38     62
D371V9, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             129
  CLUS_3             4             111
  CLUS_4             2              38
  CLUS_5             9              62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL9L MUTATED        1      7     10      4      3
  BCL9L WILD-TYPE     47    102    120     97     89
D371V10, multiclass
        clus
vv       BCL9L MUTATED BCL9L WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3            10             120
  CLUS_4             4              97
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(372) Variable = SENP3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SENP3 MUTATED        3      1      0     10
  SENP3 WILD-TYPE    132     91    172    166
D372V1, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SENP3 MUTATED        9      0      3
  SENP3 WILD-TYPE    206    155    159
D372V2, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SENP3 MUTATED        2      3      3      3
  SENP3 WILD-TYPE    133    121    122     57
D372V3, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             3             122
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SENP3 MUTATED        4      5      2
  SENP3 WILD-TYPE    249     97     87
D372V4, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SENP3 MUTATED        0      9      4
  SENP3 WILD-TYPE    164    238    139
D372V5, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SENP3 MUTATED        4      1      5      0      3
  SENP3 WILD-TYPE    117    103     86    121    114
D372V6, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SENP3 MUTATED        1      8      5
  SENP3 WILD-TYPE    158    243    160
D372V7, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SENP3 MUTATED        1      5      7      0      1
  SENP3 WILD-TYPE    117    126    144     94     80
D372V8, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SENP3 MUTATED        1      3      2      2      3
  SENP3 WILD-TYPE    117    133    113     38     68
D372V9, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SENP3 MUTATED        1      4      5      1      0
  SENP3 WILD-TYPE     47    105    125    100     92
D372V10, multiclass
        clus
vv       SENP3 MUTATED SENP3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(373) Variable = MMP3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MMP3 MUTATED        0      1      1     11
  MMP3 WILD-TYPE    135     91    171    165
D373V1, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MMP3 MUTATED        8      1      3
  MMP3 WILD-TYPE    207    154    159
D373V2, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MMP3 MUTATED        6      2      1      1
  MMP3 WILD-TYPE    129    122    124     59
D373V3, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MMP3 MUTATED        8      1      1
  MMP3 WILD-TYPE    245    101     88
D373V4, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MMP3 MUTATED        3      6      4
  MMP3 WILD-TYPE    161    241    139
D373V5, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            6            241
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP3 MUTATED        2      2      5      1      3
  MMP3 WILD-TYPE    119    102     86    120    114
D373V6, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MMP3 MUTATED        2      8      3
  MMP3 WILD-TYPE    157    243    162
D373V7, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            8            243
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP3 MUTATED        1      3      7      1      1
  MMP3 WILD-TYPE    117    128    144     93     80
D373V8, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP3 MUTATED        1      4      1      1      4
  MMP3 WILD-TYPE    117    132    114     39     67
D373V9, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP3 MUTATED        0      3      7      0      1
  MMP3 WILD-TYPE     48    106    123    101     91
D373V10, multiclass
        clus
vv       MMP3 MUTATED MMP3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            7            123
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(374) Variable = RCOR3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RCOR3 MUTATED        1      0      3     12
  RCOR3 WILD-TYPE    134     92    169    164
D374V1, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RCOR3 MUTATED       11      1      3
  RCOR3 WILD-TYPE    204    154    159
D374V2, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RCOR3 MUTATED        6      8      0      1
  RCOR3 WILD-TYPE    129    116    125     59
D374V3, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RCOR3 MUTATED       13      1      1
  RCOR3 WILD-TYPE    240    101     88
D374V4, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RCOR3 MUTATED        3      9      3
  RCOR3 WILD-TYPE    161    238    140
D374V5, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RCOR3 MUTATED        1      3      8      1      2
  RCOR3 WILD-TYPE    120    101     83    120    115
D374V6, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RCOR3 MUTATED        2     12      3
  RCOR3 WILD-TYPE    157    239    162
D374V7, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RCOR3 MUTATED        1      7      6      1      2
  RCOR3 WILD-TYPE    117    124    145     93     79
D374V8, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RCOR3 MUTATED        1      7      2      1      4
  RCOR3 WILD-TYPE    117    129    113     39     67
D374V9, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RCOR3 MUTATED        1      6      5      2      1
  RCOR3 WILD-TYPE     47    103    125     99     91
D374V10, multiclass
        clus
vv       RCOR3 MUTATED RCOR3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(375) Variable = MBD2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBD2 MUTATED        1      2      1      8
  MBD2 WILD-TYPE    134     90    171    168
D375V1, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD2 MUTATED        7      1      1
  MBD2 WILD-TYPE    208    154    161
D375V2, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBD2 MUTATED        2      4      1      1
  MBD2 WILD-TYPE    133    120    124     59
D375V3, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            4            120
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD2 MUTATED        6      0      2
  MBD2 WILD-TYPE    247    102     87
D375V4, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD2 MUTATED        1      8      2
  MBD2 WILD-TYPE    163    239    141
D375V5, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD2 MUTATED        1      2      5      1      2
  MBD2 WILD-TYPE    120    102     86    120    115
D375V6, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD2 MUTATED        2      9      1
  MBD2 WILD-TYPE    157    242    164
D375V7, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD2 MUTATED        1      5      5      1      0
  MBD2 WILD-TYPE    117    126    146     93     81
D375V8, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD2 MUTATED        0      4      0      1      3
  MBD2 WILD-TYPE    118    132    115     39     68
D375V9, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD2 MUTATED        0      4      3      0      1
  MBD2 WILD-TYPE     48    105    127    101     91
D375V10, multiclass
        clus
vv       MBD2 MUTATED MBD2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(376) Variable = ABCB6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCB6 MUTATED        2      1      3     12
  ABCB6 WILD-TYPE    133     91    169    164
D376V1, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB6 MUTATED       12      1      3
  ABCB6 WILD-TYPE    203    154    159
D376V2, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCB6 MUTATED        4     10      1      1
  ABCB6 WILD-TYPE    131    114    124     59
D376V3, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             4             131
  CLUS_2            10             114
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB6 MUTATED        7      7      2
  ABCB6 WILD-TYPE    246     95     87
D376V4, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             7              95
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB6 MUTATED        4      9      3
  ABCB6 WILD-TYPE    160    238    140
D376V5, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB6 MUTATED        2      3      5      2      4
  ABCB6 WILD-TYPE    119    101     86    119    113
D376V6, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCB6 MUTATED        2     14      2
  ABCB6 WILD-TYPE    157    237    163
D376V7, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            14             237
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB6 MUTATED        2      7      7      2      0
  ABCB6 WILD-TYPE    116    124    144     92     81
D376V8, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB6 MUTATED        1      7      1      1      6
  ABCB6 WILD-TYPE    117    129    114     39     65
D376V9, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCB6 MUTATED        1      7      6      0      2
  ABCB6 WILD-TYPE     47    102    124    101     90
D376V10, multiclass
        clus
vv       ABCB6 MUTATED ABCB6 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(377) Variable = BTBD11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTBD11 MUTATED        4      1      6     20
  BTBD11 WILD-TYPE    131     91    166    156
D377V1, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1               91
  CLUS_3              6              166
  CLUS_4             20              156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BTBD11 MUTATED       17      5      3
  BTBD11 WILD-TYPE    198    150    159
D377V2, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1             17              198
  CLUS_2              5              150
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTBD11 MUTATED       10      9      3      2
  BTBD11 WILD-TYPE    125    115    122     58
D377V3, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1             10              125
  CLUS_2              9              115
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BTBD11 MUTATED       14      7      3
  BTBD11 WILD-TYPE    239     95     86
D377V4, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1             14              239
  CLUS_2              7               95
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BTBD11 MUTATED        6     19      5
  BTBD11 WILD-TYPE    158    228    138
D377V5, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             19              228
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD11 MUTATED        3     11     10      3      3
  BTBD11 WILD-TYPE    118     93     81    118    114
D377V6, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              3              118
  CLUS_2             11               93
  CLUS_3             10               81
  CLUS_4              3              118
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BTBD11 MUTATED        6     22      3
  BTBD11 WILD-TYPE    153    229    162
D377V7, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              6              153
  CLUS_2             22              229
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD11 MUTATED        3      9     14      4      1
  BTBD11 WILD-TYPE    115    122    137     90     80
D377V8, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              9              122
  CLUS_3             14              137
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD11 MUTATED        3     13      1      3      5
  BTBD11 WILD-TYPE    115    123    114     37     66
D377V9, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             13              123
  CLUS_3              1              114
  CLUS_4              3               37
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTBD11 MUTATED        0      7     12      2      4
  BTBD11 WILD-TYPE     48    102    118     99     88
D377V10, multiclass
        clus
vv       BTBD11 MUTATED BTBD11 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              7              102
  CLUS_3             12              118
  CLUS_4              2               99
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(378) Variable = SOX7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX7 MUTATED        1      2      5     12
  SOX7 WILD-TYPE    134     90    167    164
D378V1, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            5            167
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX7 MUTATED       11      1      5
  SOX7 WILD-TYPE    204    154    157
D378V2, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1           11            204
  CLUS_2            1            154
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOX7 MUTATED        5      8      0      4
  SOX7 WILD-TYPE    130    116    125     56
D378V3, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            8            116
  CLUS_3            0            125
  CLUS_4            4             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX7 MUTATED       11      5      1
  SOX7 WILD-TYPE    242     97     88
D378V4, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX7 MUTATED        3     10      6
  SOX7 WILD-TYPE    161    237    137
D378V5, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            3            161
  CLUS_2           10            237
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOX7 MUTATED        2      7      5      1      4
  SOX7 WILD-TYPE    119     97     86    120    113
D378V6, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            7             97
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOX7 MUTATED        3     12      5
  SOX7 WILD-TYPE    156    239    160
D378V7, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           12            239
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOX7 MUTATED        3      6      8      1      2
  SOX7 WILD-TYPE    115    125    143     93     79
D378V8, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            6            125
  CLUS_3            8            143
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOX7 MUTATED        1      5      1      2      7
  SOX7 WILD-TYPE    117    131    114     38     64
D378V9, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOX7 MUTATED        1      3      8      3      1
  SOX7 WILD-TYPE     47    106    122     98     91
D378V10, multiclass
        clus
vv       SOX7 MUTATED SOX7 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            8            122
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(379) Variable = HCRTR2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HCRTR2 MUTATED        1      2      5      6
  HCRTR2 WILD-TYPE    134     90    167    170
D379V1, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              5              167
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR2 MUTATED        4      6      2
  HCRTR2 WILD-TYPE    211    149    160
D379V2, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              6              149
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HCRTR2 MUTATED        5      1      3      1
  HCRTR2 WILD-TYPE    130    123    122     59
D379V3, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              1              123
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR2 MUTATED        7      0      3
  HCRTR2 WILD-TYPE    246    102     86
D379V4, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              0              102
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR2 MUTATED        5      5      4
  HCRTR2 WILD-TYPE    159    242    139
D379V5, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR2 MUTATED        1      2      3      5      3
  HCRTR2 WILD-TYPE    120    102     88    116    114
D379V6, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              5              116
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR2 MUTATED        5      7      2
  HCRTR2 WILD-TYPE    154    244    163
D379V7, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              5              154
  CLUS_2              7              244
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR2 MUTATED        2      3      4      4      1
  HCRTR2 WILD-TYPE    116    128    147     90     80
D379V8, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              128
  CLUS_3              4              147
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR2 MUTATED        5      2      0      1      2
  HCRTR2 WILD-TYPE    113    134    115     39     69
D379V9, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR2 MUTATED        0      4      2      0      4
  HCRTR2 WILD-TYPE     48    105    128    101     88
D379V10, multiclass
        clus
vv       HCRTR2 MUTATED HCRTR2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(380) Variable = LARP1B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LARP1B MUTATED        3      1      1      9
  LARP1B WILD-TYPE    132     91    171    167
D380V1, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP1B MUTATED        9      1      2
  LARP1B WILD-TYPE    206    154    160
D380V2, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LARP1B MUTATED        6      5      0      0
  LARP1B WILD-TYPE    129    119    125     60
D380V3, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              6              129
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP1B MUTATED        8      2      1
  LARP1B WILD-TYPE    245    100     88
D380V4, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              8              245
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP1B MUTATED        2      7      3
  LARP1B WILD-TYPE    162    240    140
D380V5, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP1B MUTATED        3      3      3      0      3
  LARP1B WILD-TYPE    118    101     88    121    114
D380V6, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              3              118
  CLUS_2              3              101
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LARP1B MUTATED        2     10      2
  LARP1B WILD-TYPE    157    241    163
D380V7, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              2              157
  CLUS_2             10              241
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP1B MUTATED        1      6      5      0      2
  LARP1B WILD-TYPE    117    125    146     94     79
D380V8, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP1B MUTATED        2      5      2      1      2
  LARP1B WILD-TYPE    116    131    113     39     69
D380V9, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              131
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LARP1B MUTATED        0      6      4      2      0
  LARP1B WILD-TYPE     48    103    126     99     92
D380V10, multiclass
        clus
vv       LARP1B MUTATED LARP1B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(381) Variable = C17ORF57 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C17ORF57 MUTATED        0      1      5     10
  C17ORF57 WILD-TYPE    135     91    167    166
D381V1, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                5                167
  CLUS_4               10                166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C17ORF57 MUTATED        8      4      1
  C17ORF57 WILD-TYPE    207    151    161
D381V2, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                8                207
  CLUS_2                4                151
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C17ORF57 MUTATED        7      6      0      1
  C17ORF57 WILD-TYPE    128    118    125     59
D381V3, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                6                118
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C17ORF57 MUTATED       12      2      0
  C17ORF57 WILD-TYPE    241    100     89
D381V4, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C17ORF57 MUTATED        4      9      2
  C17ORF57 WILD-TYPE    160    238    141
D381V5, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                4                160
  CLUS_2                9                238
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C17ORF57 MUTATED        0      1      9      3      2
  C17ORF57 WILD-TYPE    121    103     82    118    115
D381V6, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                9                 82
  CLUS_4                3                118
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C17ORF57 MUTATED        3     11      2
  C17ORF57 WILD-TYPE    156    240    163
D381V7, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               11                240
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C17ORF57 MUTATED        0      8      5      3      0
  C17ORF57 WILD-TYPE    118    123    146     91     81
D381V8, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                8                123
  CLUS_3                5                146
  CLUS_4                3                 91
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C17ORF57 MUTATED        3      6      0      1      1
  C17ORF57 WILD-TYPE    115    130    115     39     70
D381V9, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                6                130
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C17ORF57 MUTATED        1      5      2      0      3
  C17ORF57 WILD-TYPE     47    104    128    101     89
D381V10, multiclass
        clus
vv       C17ORF57 MUTATED C17ORF57 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                5                104
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(382) Variable = HAUS3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAUS3 MUTATED        0      2      2      8
  HAUS3 WILD-TYPE    135     90    170    168
D382V1, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS3 MUTATED        6      0      5
  HAUS3 WILD-TYPE    209    155    157
D382V2, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAUS3 MUTATED        3      2      1      3
  HAUS3 WILD-TYPE    132    122    124     57
D382V3, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS3 MUTATED        7      1      1
  HAUS3 WILD-TYPE    246    101     88
D382V4, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS3 MUTATED        0     10      3
  HAUS3 WILD-TYPE    164    237    140
D382V5, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS3 MUTATED        2      4      4      0      3
  HAUS3 WILD-TYPE    119    100     87    121    114
D382V6, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS3 MUTATED        2      9      2
  HAUS3 WILD-TYPE    157    242    163
D382V7, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS3 MUTATED        3      4      6      0      0
  HAUS3 WILD-TYPE    115    127    145     94     81
D382V8, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             127
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS3 MUTATED        1      3      1      0      5
  HAUS3 WILD-TYPE    117    133    114     40     66
D382V9, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS3 MUTATED        0      5      3      2      0
  HAUS3 WILD-TYPE     48    104    127     99     92
D382V10, multiclass
        clus
vv       HAUS3 MUTATED HAUS3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(383) Variable = EHMT2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EHMT2 MUTATED        2      7      4     10
  EHMT2 WILD-TYPE    133     85    168    166
D383V1, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             7              85
  CLUS_3             4             168
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHMT2 MUTATED       12      4      4
  EHMT2 WILD-TYPE    203    151    158
D383V2, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             4             151
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EHMT2 MUTATED        7      5      0      3
  EHMT2 WILD-TYPE    128    119    125     57
D383V3, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHMT2 MUTATED       12      3      0
  EHMT2 WILD-TYPE    241     99     89
D383V4, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHMT2 MUTATED        5     14      3
  EHMT2 WILD-TYPE    159    233    140
D383V5, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            14             233
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHMT2 MUTATED        7      7      5      1      2
  EHMT2 WILD-TYPE    114     97     86    120    115
D383V6, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             7             114
  CLUS_2             7              97
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHMT2 MUTATED        4     15      4
  EHMT2 WILD-TYPE    155    236    161
D383V7, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            15             236
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHMT2 MUTATED        7      7      9      0      0
  EHMT2 WILD-TYPE    111    124    142     94     81
D383V8, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             7             111
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHMT2 MUTATED        4      6      3      2      2
  EHMT2 WILD-TYPE    114    130    112     38     69
D383V9, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHMT2 MUTATED        2      7      6      2      0
  EHMT2 WILD-TYPE     46    102    124     99     92
D383V10, multiclass
        clus
vv       EHMT2 MUTATED EHMT2 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(384) Variable = PLEKHA5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLEKHA5 MUTATED        3      0      3     17
  PLEKHA5 WILD-TYPE    132     92    169    159
D384V1, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4              17               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA5 MUTATED       14      3      2
  PLEKHA5 WILD-TYPE    201    152    160
D384V2, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1              14               201
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLEKHA5 MUTATED        6     10      3      2
  PLEKHA5 WILD-TYPE    129    114    122     58
D384V3, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               6               129
  CLUS_2              10               114
  CLUS_3               3               122
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA5 MUTATED       12      6      3
  PLEKHA5 WILD-TYPE    241     96     86
D384V4, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               6                96
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA5 MUTATED        4     15      3
  PLEKHA5 WILD-TYPE    160    232    140
D384V5, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               4               160
  CLUS_2              15               232
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA5 MUTATED        0      3     10      4      5
  PLEKHA5 WILD-TYPE    121    101     81    117    112
D384V6, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               3               101
  CLUS_3              10                81
  CLUS_4               4               117
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHA5 MUTATED        3     16      4
  PLEKHA5 WILD-TYPE    156    235    161
D384V7, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              16               235
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA5 MUTATED        0     12      7      3      1
  PLEKHA5 WILD-TYPE    118    119    144     91     80
D384V8, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               0               118
  CLUS_2              12               119
  CLUS_3               7               144
  CLUS_4               3                91
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA5 MUTATED        2      6      2      2      5
  PLEKHA5 WILD-TYPE    116    130    113     38     66
D384V9, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               6               130
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHA5 MUTATED        0      9      5      0      3
  PLEKHA5 WILD-TYPE     48    100    125    101     89
D384V10, multiclass
        clus
vv       PLEKHA5 MUTATED PLEKHA5 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               9               100
  CLUS_3               5               125
  CLUS_4               0               101
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(385) Variable = ALG10 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALG10 MUTATED        0      2      4     11
  ALG10 WILD-TYPE    135     90    168    165
D385V1, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             4             168
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALG10 MUTATED        9      2      3
  ALG10 WILD-TYPE    206    153    159
D385V2, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALG10 MUTATED        6      5      2      3
  ALG10 WILD-TYPE    129    119    123     57
D385V3, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALG10 MUTATED       11      3      2
  ALG10 WILD-TYPE    242     99     87
D385V4, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALG10 MUTATED        3      7      5
  ALG10 WILD-TYPE    161    240    138
D385V5, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALG10 MUTATED        2      3      5      2      3
  ALG10 WILD-TYPE    119    101     86    119    114
D385V6, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALG10 MUTATED        4     10      3
  ALG10 WILD-TYPE    155    241    162
D385V7, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALG10 MUTATED        3      3      8      2      1
  ALG10 WILD-TYPE    115    128    143     92     80
D385V8, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             128
  CLUS_3             8             143
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALG10 MUTATED        0      2      2      2      5
  ALG10 WILD-TYPE    118    134    113     38     66
D385V9, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALG10 MUTATED        1      2      5      2      1
  ALG10 WILD-TYPE     47    107    125     99     91
D385V10, multiclass
        clus
vv       ALG10 MUTATED ALG10 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(386) Variable = NAA16 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAA16 MUTATED        5      0      2      8
  NAA16 WILD-TYPE    130     92    170    168
D386V1, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA16 MUTATED        8      2      2
  NAA16 WILD-TYPE    207    153    160
D386V2, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAA16 MUTATED        6      4      2      1
  NAA16 WILD-TYPE    129    120    123     59
D386V3, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA16 MUTATED        8      4      1
  NAA16 WILD-TYPE    245     98     88
D386V4, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA16 MUTATED        7      7      1
  NAA16 WILD-TYPE    157    240    142
D386V5, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             7             157
  CLUS_2             7             240
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA16 MUTATED        1      3      5      4      2
  NAA16 WILD-TYPE    120    101     86    117    115
D386V6, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             4             117
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA16 MUTATED        3      8      4
  NAA16 WILD-TYPE    156    243    161
D386V7, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA16 MUTATED        2      5      6      2      0
  NAA16 WILD-TYPE    116    126    145     92     81
D386V8, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA16 MUTATED        2      3      3      1      4
  NAA16 WILD-TYPE    116    133    112     39     67
D386V9, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA16 MUTATED        1      3      5      2      2
  NAA16 WILD-TYPE     47    106    125     99     90
D386V10, multiclass
        clus
vv       NAA16 MUTATED NAA16 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(387) Variable = C6ORF150 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C6ORF150 MUTATED        2      0      2      4
  C6ORF150 WILD-TYPE    133     92    170    172
D387V1, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                2                170
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF150 MUTATED        4      2      0
  C6ORF150 WILD-TYPE    211    153    162
D387V2, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                2                153
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C6ORF150 MUTATED        3      2      1      1
  C6ORF150 WILD-TYPE    132    122    124     59
D387V3, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                2                122
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF150 MUTATED        4      3      0
  C6ORF150 WILD-TYPE    249     99     89
D387V4, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF150 MUTATED        3      4      1
  C6ORF150 WILD-TYPE    161    243    142
D387V5, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                4                243
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF150 MUTATED        1      0      6      1      0
  C6ORF150 WILD-TYPE    120    104     85    120    117
D387V6, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                6                 85
  CLUS_4                1                120
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF150 MUTATED        1      7      0
  C6ORF150 WILD-TYPE    158    244    165
D387V7, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                7                244
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF150 MUTATED        1      4      2      1      0
  C6ORF150 WILD-TYPE    117    127    149     93     81
D387V8, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                4                127
  CLUS_3                2                149
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF150 MUTATED        1      1      0      3      0
  C6ORF150 WILD-TYPE    117    135    115     37     71
D387V9, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                1                135
  CLUS_3                0                115
  CLUS_4                3                 37
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF150 MUTATED        2      1      1      0      1
  C6ORF150 WILD-TYPE     46    108    129    101     91
D387V10, multiclass
        clus
vv       C6ORF150 MUTATED C6ORF150 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                1                108
  CLUS_3                1                129
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(388) Variable = SLC7A10 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC7A10 MUTATED        1      0      0      4
  SLC7A10 WILD-TYPE    134     92    172    172
D388V1, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC7A10 MUTATED        4      1      1
  SLC7A10 WILD-TYPE    211    154    161
D388V2, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC7A10 MUTATED        2      2      0      1
  SLC7A10 WILD-TYPE    133    122    125     59
D388V3, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC7A10 MUTATED        4      1      0
  SLC7A10 WILD-TYPE    249    101     89
D388V4, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC7A10 MUTATED        0      3      3
  SLC7A10 WILD-TYPE    164    244    140
D388V5, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               3               244
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC7A10 MUTATED        1      2      2      0      1
  SLC7A10 WILD-TYPE    120    102     89    121    116
D388V6, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC7A10 MUTATED        0      5      1
  SLC7A10 WILD-TYPE    159    246    164
D388V7, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               5               246
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC7A10 MUTATED        1      2      3      0      0
  SLC7A10 WILD-TYPE    117    129    148     94     81
D388V8, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               129
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC7A10 MUTATED        1      3      0      0      2
  SLC7A10 WILD-TYPE    117    133    115     40     69
D388V9, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC7A10 MUTATED        1      1      4      0      0
  SLC7A10 WILD-TYPE     47    108    126    101     92
D388V10, multiclass
        clus
vv       SLC7A10 MUTATED SLC7A10 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               4               126
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(389) Variable = KIF21A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF21A MUTATED        3      3      2     16
  KIF21A WILD-TYPE    132     89    170    160
D389V1, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3               89
  CLUS_3              2              170
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF21A MUTATED       15      3      3
  KIF21A WILD-TYPE    200    152    159
D389V2, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1             15              200
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF21A MUTATED       10      9      1      0
  KIF21A WILD-TYPE    125    115    124     60
D389V3, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1             10              125
  CLUS_2              9              115
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF21A MUTATED       13      5      2
  KIF21A WILD-TYPE    240     97     87
D389V4, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1             13              240
  CLUS_2              5               97
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF21A MUTATED        4     12      7
  KIF21A WILD-TYPE    160    235    136
D389V5, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              4              160
  CLUS_2             12              235
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF21A MUTATED        0      8      8      3      4
  KIF21A WILD-TYPE    121     96     83    118    113
D389V6, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              0              121
  CLUS_2              8               96
  CLUS_3              8               83
  CLUS_4              3              118
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF21A MUTATED        3     17      4
  KIF21A WILD-TYPE    156    234    161
D389V7, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              3              156
  CLUS_2             17              234
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF21A MUTATED        1      9      9      3      2
  KIF21A WILD-TYPE    117    122    142     91     79
D389V8, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              1              117
  CLUS_2              9              122
  CLUS_3              9              142
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF21A MUTATED        3      8      4      2      4
  KIF21A WILD-TYPE    115    128    111     38     67
D389V9, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              128
  CLUS_3              4              111
  CLUS_4              2               38
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF21A MUTATED        1      8      6      3      3
  KIF21A WILD-TYPE     47    101    124     98     89
D389V10, multiclass
        clus
vv       KIF21A MUTATED KIF21A WILD-TYPE
  CLUS_1              1               47
  CLUS_2              8              101
  CLUS_3              6              124
  CLUS_4              3               98
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(390) Variable = GPR82 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR82 MUTATED        1      1      1      6
  GPR82 WILD-TYPE    134     91    171    170
D390V1, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR82 MUTATED        7      1      1
  GPR82 WILD-TYPE    208    154    161
D390V2, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR82 MUTATED        6      2      0      0
  GPR82 WILD-TYPE    129    122    125     60
D390V3, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR82 MUTATED        7      1      0
  GPR82 WILD-TYPE    246    101     89
D390V4, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR82 MUTATED        1      7      0
  GPR82 WILD-TYPE    163    240    143
D390V5, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR82 MUTATED        0      3      5      0      0
  GPR82 WILD-TYPE    121    101     86    121    117
D390V6, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR82 MUTATED        1      7      1
  GPR82 WILD-TYPE    158    244    164
D390V7, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR82 MUTATED        1      4      2      0      2
  GPR82 WILD-TYPE    117    127    149     94     79
D390V8, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR82 MUTATED        1      1      0      2      3
  GPR82 WILD-TYPE    117    135    115     38     68
D390V9, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR82 MUTATED        1      2      3      1      0
  GPR82 WILD-TYPE     47    107    127    100     92
D390V10, multiclass
        clus
vv       GPR82 MUTATED GPR82 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(391) Variable = C14ORF50 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C14ORF50 MUTATED        0      1      0      7
  C14ORF50 WILD-TYPE    135     91    172    169
D391V1, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF50 MUTATED        3      0      3
  C14ORF50 WILD-TYPE    212    155    159
D391V2, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                3                212
  CLUS_2                0                155
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C14ORF50 MUTATED        2      5      1      0
  C14ORF50 WILD-TYPE    133    119    124     60
D391V3, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                5                119
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF50 MUTATED        4      2      2
  C14ORF50 WILD-TYPE    249    100     87
D391V4, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                2                100
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF50 MUTATED        1      2      4
  C14ORF50 WILD-TYPE    163    245    139
D391V5, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                2                245
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF50 MUTATED        1      1      2      0      3
  C14ORF50 WILD-TYPE    120    103     89    121    114
D391V6, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                2                 89
  CLUS_4                0                121
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C14ORF50 MUTATED        2      5      1
  C14ORF50 WILD-TYPE    157    246    164
D391V7, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                5                246
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF50 MUTATED        2      2      3      0      1
  C14ORF50 WILD-TYPE    116    129    148     94     80
D391V8, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                2                129
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF50 MUTATED        0      2      0      1      3
  C14ORF50 WILD-TYPE    118    134    115     39     68
D391V9, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C14ORF50 MUTATED        1      1      3      1      0
  C14ORF50 WILD-TYPE     47    108    127    100     92
D391V10, multiclass
        clus
vv       C14ORF50 MUTATED C14ORF50 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                1                108
  CLUS_3                3                127
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(392) Variable = ELOVL2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ELOVL2 MUTATED        2      0      1      6
  ELOVL2 WILD-TYPE    133     92    171    170
D392V1, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ELOVL2 MUTATED        5      2      1
  ELOVL2 WILD-TYPE    210    153    161
D392V2, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ELOVL2 MUTATED        4      4      0      0
  ELOVL2 WILD-TYPE    131    120    125     60
D392V3, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ELOVL2 MUTATED        6      1      1
  ELOVL2 WILD-TYPE    247    101     88
D392V4, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ELOVL2 MUTATED        2      5      1
  ELOVL2 WILD-TYPE    162    242    142
D392V5, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELOVL2 MUTATED        3      1      2      0      2
  ELOVL2 WILD-TYPE    118    103     89    121    115
D392V6, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ELOVL2 MUTATED        2      7      0
  ELOVL2 WILD-TYPE    157    244    165
D392V7, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELOVL2 MUTATED        2      1      5      1      0
  ELOVL2 WILD-TYPE    116    130    146     93     81
D392V8, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              1              130
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELOVL2 MUTATED        3      1      0      1      2
  ELOVL2 WILD-TYPE    115    135    115     39     69
D392V9, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELOVL2 MUTATED        2      1      3      0      1
  ELOVL2 WILD-TYPE     46    108    127    101     91
D392V10, multiclass
        clus
vv       ELOVL2 MUTATED ELOVL2 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(393) Variable = GPC4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPC4 MUTATED        0      1      1      6
  GPC4 WILD-TYPE    135     91    171    170
D393V1, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC4 MUTATED        7      1      0
  GPC4 WILD-TYPE    208    154    162
D393V2, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPC4 MUTATED        3      2      0      1
  GPC4 WILD-TYPE    132    122    125     59
D393V3, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC4 MUTATED        4      2      0
  GPC4 WILD-TYPE    249    100     89
D393V4, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC4 MUTATED        0      8      1
  GPC4 WILD-TYPE    164    239    142
D393V5, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            8            239
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC4 MUTATED        0      2      7      0      0
  GPC4 WILD-TYPE    121    102     84    121    117
D393V6, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPC4 MUTATED        0      9      0
  GPC4 WILD-TYPE    159    242    165
D393V7, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            9            242
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC4 MUTATED        0      4      5      0      0
  GPC4 WILD-TYPE    118    127    146     94     81
D393V8, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC4 MUTATED        0      6      0      0      2
  GPC4 WILD-TYPE    118    130    115     40     69
D393V9, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPC4 MUTATED        0      4      4      0      0
  GPC4 WILD-TYPE     48    105    126    101     92
D393V10, multiclass
        clus
vv       GPC4 MUTATED GPC4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(394) Variable = FOXN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FOXN3 MUTATED        1      0      1     13
  FOXN3 WILD-TYPE    134     92    171    163
D394V1, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXN3 MUTATED       12      0      1
  FOXN3 WILD-TYPE    203    155    161
D394V2, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FOXN3 MUTATED        3      8      1      1
  FOXN3 WILD-TYPE    132    116    124     59
D394V3, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             8             116
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXN3 MUTATED        9      3      1
  FOXN3 WILD-TYPE    244     99     88
D394V4, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXN3 MUTATED        0      8      5
  FOXN3 WILD-TYPE    164    239    138
D394V5, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             8             239
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXN3 MUTATED        1      2      6      0      4
  FOXN3 WILD-TYPE    120    102     85    121    113
D394V6, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXN3 MUTATED        2     10      3
  FOXN3 WILD-TYPE    157    241    162
D394V7, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXN3 MUTATED        2      6      7      0      0
  FOXN3 WILD-TYPE    116    125    144     94     81
D394V8, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXN3 MUTATED        1      4      1      1      6
  FOXN3 WILD-TYPE    117    132    114     39     65
D394V9, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXN3 MUTATED        1      4      7      1      0
  FOXN3 WILD-TYPE     47    105    123    100     92
D394V10, multiclass
        clus
vv       FOXN3 MUTATED FOXN3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(395) Variable = SETDB2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETDB2 MUTATED        3      2      2     10
  SETDB2 WILD-TYPE    132     90    170    166
D395V1, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2               90
  CLUS_3              2              170
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETDB2 MUTATED        7      3      1
  SETDB2 WILD-TYPE    208    152    161
D395V2, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              3              152
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETDB2 MUTATED        7      8      0      1
  SETDB2 WILD-TYPE    128    116    125     59
D395V3, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETDB2 MUTATED       11      5      0
  SETDB2 WILD-TYPE    242     97     89
D395V4, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              5               97
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETDB2 MUTATED        5      7      4
  SETDB2 WILD-TYPE    159    240    139
D395V5, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              7              240
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETDB2 MUTATED        4      2      5      2      3
  SETDB2 WILD-TYPE    117    102     86    119    114
D395V6, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETDB2 MUTATED        3     12      2
  SETDB2 WILD-TYPE    156    239    163
D395V7, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             12              239
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETDB2 MUTATED        3      6      7      1      0
  SETDB2 WILD-TYPE    115    125    144     93     81
D395V8, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              125
  CLUS_3              7              144
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETDB2 MUTATED        2      6      1      0      2
  SETDB2 WILD-TYPE    116    130    114     40     69
D395V9, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETDB2 MUTATED        2      4      4      0      1
  SETDB2 WILD-TYPE     46    105    126    101     91
D395V10, multiclass
        clus
vv       SETDB2 MUTATED SETDB2 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(396) Variable = CTNNA1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTNNA1 MUTATED        3      3      2     14
  CTNNA1 WILD-TYPE    132     89    170    162
D396V1, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3               89
  CLUS_3              2              170
  CLUS_4             14              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNA1 MUTATED       14      1      6
  CTNNA1 WILD-TYPE    201    154    156
D396V2, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              1              154
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTNNA1 MUTATED        4      7      4      3
  CTNNA1 WILD-TYPE    131    117    121     57
D396V3, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              7              117
  CLUS_3              4              121
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNA1 MUTATED        9      4      5
  CTNNA1 WILD-TYPE    244     98     84
D396V4, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              4               98
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNA1 MUTATED        7     11      4
  CTNNA1 WILD-TYPE    157    236    139
D396V5, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              7              157
  CLUS_2             11              236
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNA1 MUTATED        2      3      9      4      4
  CTNNA1 WILD-TYPE    119    101     82    117    113
D396V6, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              9               82
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CTNNA1 MUTATED        7      9      6
  CTNNA1 WILD-TYPE    152    242    159
D396V7, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              7              152
  CLUS_2              9              242
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNA1 MUTATED        3      9      7      2      1
  CTNNA1 WILD-TYPE    115    122    144     92     80
D396V8, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              9              122
  CLUS_3              7              144
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNA1 MUTATED        2      8      3      3      4
  CTNNA1 WILD-TYPE    116    128    112     37     67
D396V9, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              8              128
  CLUS_3              3              112
  CLUS_4              3               37
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTNNA1 MUTATED        2      9      5      2      2
  CTNNA1 WILD-TYPE     46    100    125     99     90
D396V10, multiclass
        clus
vv       CTNNA1 MUTATED CTNNA1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              9              100
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(397) Variable = UBE2Q1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBE2Q1 MUTATED        2      0      0      5
  UBE2Q1 WILD-TYPE    133     92    172    171
D397V1, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBE2Q1 MUTATED        2      0      1
  UBE2Q1 WILD-TYPE    213    155    161
D397V2, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              2              213
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBE2Q1 MUTATED        2      3      1      1
  UBE2Q1 WILD-TYPE    133    121    124     59
D397V3, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBE2Q1 MUTATED        6      0      1
  UBE2Q1 WILD-TYPE    247    102     88
D397V4, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBE2Q1 MUTATED        0      4      2
  UBE2Q1 WILD-TYPE    164    243    141
D397V5, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBE2Q1 MUTATED        0      0      4      0      2
  UBE2Q1 WILD-TYPE    121    104     87    121    115
D397V6, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBE2Q1 MUTATED        0      5      2
  UBE2Q1 WILD-TYPE    159    246    163
D397V7, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBE2Q1 MUTATED        1      2      4      0      0
  UBE2Q1 WILD-TYPE    117    129    147     94     81
D397V8, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBE2Q1 MUTATED        0      1      0      1      1
  UBE2Q1 WILD-TYPE    118    135    115     39     70
D397V9, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBE2Q1 MUTATED        0      2      1      0      0
  UBE2Q1 WILD-TYPE     48    107    129    101     92
D397V10, multiclass
        clus
vv       UBE2Q1 MUTATED UBE2Q1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(398) Variable = MAP2K7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP2K7 MUTATED        2      4      3     17
  MAP2K7 WILD-TYPE    133     88    169    159
D398V1, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K7 MUTATED       15      1      7
  MAP2K7 WILD-TYPE    200    154    155
D398V2, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              1              154
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP2K7 MUTATED        8      8      5      1
  MAP2K7 WILD-TYPE    127    116    120     59
D398V3, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              8              116
  CLUS_3              5              120
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K7 MUTATED       12      6      4
  MAP2K7 WILD-TYPE    241     96     85
D398V4, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              6               96
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K7 MUTATED        3     15      5
  MAP2K7 WILD-TYPE    161    232    138
D398V5, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             15              232
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K7 MUTATED        2      7      8      1      5
  MAP2K7 WILD-TYPE    119     97     83    120    112
D398V6, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              7               97
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP2K7 MUTATED        1     17      9
  MAP2K7 WILD-TYPE    158    234    156
D398V7, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             17              234
  CLUS_3              9              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K7 MUTATED        3     11      9      0      4
  MAP2K7 WILD-TYPE    115    120    142     94     77
D398V8, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             11              120
  CLUS_3              9              142
  CLUS_4              0               94
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K7 MUTATED        0      8      6      2      5
  MAP2K7 WILD-TYPE    118    128    109     38     66
D398V9, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              8              128
  CLUS_3              6              109
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP2K7 MUTATED        1      7      8      5      0
  MAP2K7 WILD-TYPE     47    102    122     96     92
D398V10, multiclass
        clus
vv       MAP2K7 MUTATED MAP2K7 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              7              102
  CLUS_3              8              122
  CLUS_4              5               96
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(399) Variable = SH3RF1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3RF1 MUTATED        1      0      3     11
  SH3RF1 WILD-TYPE    134     92    169    165
D399V1, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              3              169
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3RF1 MUTATED        9      2      2
  SH3RF1 WILD-TYPE    206    153    160
D399V2, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3RF1 MUTATED        2      6      3      0
  SH3RF1 WILD-TYPE    133    118    122     60
D399V3, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              6              118
  CLUS_3              3              122
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3RF1 MUTATED        5      4      2
  SH3RF1 WILD-TYPE    248     98     87
D399V4, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3RF1 MUTATED        4      5      6
  SH3RF1 WILD-TYPE    160    242    137
D399V5, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              5              242
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3RF1 MUTATED        1      2      5      1      6
  SH3RF1 WILD-TYPE    120    102     86    120    111
D399V6, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              1              120
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3RF1 MUTATED        2      8      5
  SH3RF1 WILD-TYPE    157    243    160
D399V7, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3RF1 MUTATED        0      6      6      1      2
  SH3RF1 WILD-TYPE    118    125    145     93     79
D399V8, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              125
  CLUS_3              6              145
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3RF1 MUTATED        1      6      3      0      3
  SH3RF1 WILD-TYPE    117    130    112     40     68
D399V9, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3RF1 MUTATED        0      5      6      1      1
  SH3RF1 WILD-TYPE     48    104    124    100     91
D399V10, multiclass
        clus
vv       SH3RF1 MUTATED SH3RF1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(400) Variable = GPR161 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR161 MUTATED        2      1      6      9
  GPR161 WILD-TYPE    133     91    166    167
D400V1, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              6              166
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR161 MUTATED        7      5      2
  GPR161 WILD-TYPE    208    150    160
D400V2, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              5              150
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR161 MUTATED        4      4      2      3
  GPR161 WILD-TYPE    131    120    123     57
D400V3, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR161 MUTATED       10      2      1
  GPR161 WILD-TYPE    243    100     88
D400V4, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR161 MUTATED        5      9      2
  GPR161 WILD-TYPE    159    238    141
D400V5, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              9              238
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR161 MUTATED        2      6      2      5      1
  GPR161 WILD-TYPE    119     98     89    116    116
D400V6, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              6               98
  CLUS_3              2               89
  CLUS_4              5              116
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR161 MUTATED        4     10      4
  GPR161 WILD-TYPE    155    241    161
D400V7, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             10              241
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR161 MUTATED        1      5      6      4      2
  GPR161 WILD-TYPE    117    126    145     90     79
D400V8, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              6              145
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR161 MUTATED        2      5      4      1      2
  GPR161 WILD-TYPE    116    131    111     39     69
D400V9, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              131
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR161 MUTATED        0      3      4      3      4
  GPR161 WILD-TYPE     48    106    126     98     88
D400V10, multiclass
        clus
vv       GPR161 MUTATED GPR161 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              3               98
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(401) Variable = KANK4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KANK4 MUTATED        4      2      2     11
  KANK4 WILD-TYPE    131     90    170    165
D401V1, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KANK4 MUTATED       13      4      0
  KANK4 WILD-TYPE    202    151    162
D401V2, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             4             151
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KANK4 MUTATED        5      6      3      1
  KANK4 WILD-TYPE    130    118    122     59
D401V3, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KANK4 MUTATED       10      3      2
  KANK4 WILD-TYPE    243     99     87
D401V4, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KANK4 MUTATED        4     13      2
  KANK4 WILD-TYPE    160    234    141
D401V5, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            13             234
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KANK4 MUTATED        5      4      7      1      2
  KANK4 WILD-TYPE    116    100     84    120    115
D401V6, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KANK4 MUTATED        2     14      3
  KANK4 WILD-TYPE    157    237    162
D401V7, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            14             237
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KANK4 MUTATED        3      7      8      0      1
  KANK4 WILD-TYPE    115    124    143     94     80
D401V8, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             124
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KANK4 MUTATED        2      6      3      4      2
  KANK4 WILD-TYPE    116    130    112     36     69
D401V9, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             4              36
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KANK4 MUTATED        2      5      8      2      0
  KANK4 WILD-TYPE     46    104    122     99     92
D401V10, multiclass
        clus
vv       KANK4 MUTATED KANK4 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             8             122
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(402) Variable = ZC3H4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H4 MUTATED        6      2      1     13
  ZC3H4 WILD-TYPE    129     90    171    163
D402V1, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H4 MUTATED       15      0      3
  ZC3H4 WILD-TYPE    200    155    159
D402V2, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H4 MUTATED        9      5      2      3
  ZC3H4 WILD-TYPE    126    119    123     57
D402V3, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H4 MUTATED       13      3      3
  ZC3H4 WILD-TYPE    240     99     86
D402V4, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             3              99
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H4 MUTATED        2     15      4
  ZC3H4 WILD-TYPE    162    232    139
D402V5, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            15             232
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H4 MUTATED        4      5      9      1      2
  ZC3H4 WILD-TYPE    117     99     82    120    115
D402V6, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H4 MUTATED        2     17      3
  ZC3H4 WILD-TYPE    157    234    162
D402V7, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            17             234
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H4 MUTATED        2     11      6      0      3
  ZC3H4 WILD-TYPE    116    120    145     94     78
D402V8, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            11             120
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H4 MUTATED        1      8      2      1      5
  ZC3H4 WILD-TYPE    117    128    113     39     66
D402V9, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H4 MUTATED        0      9      7      1      0
  ZC3H4 WILD-TYPE     48    100    123    100     92
D402V10, multiclass
        clus
vv       ZC3H4 MUTATED ZC3H4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             9             100
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(403) Variable = KYNU MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KYNU MUTATED        2      0      3      9
  KYNU WILD-TYPE    133     92    169    167
D403V1, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KYNU MUTATED        5      3      3
  KYNU WILD-TYPE    210    152    159
D403V2, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            5            210
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KYNU MUTATED        7      5      0      1
  KYNU WILD-TYPE    128    119    125     59
D403V3, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            7            128
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KYNU MUTATED        8      4      1
  KYNU WILD-TYPE    245     98     88
D403V4, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            8            245
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KYNU MUTATED        5      5      4
  KYNU WILD-TYPE    159    242    139
D403V5, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            5            159
  CLUS_2            5            242
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KYNU MUTATED        1      1      7      2      3
  KYNU WILD-TYPE    120    103     84    119    114
D403V6, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KYNU MUTATED        3      9      2
  KYNU WILD-TYPE    156    242    163
D403V7, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KYNU MUTATED        1      6      5      2      0
  KYNU WILD-TYPE    117    125    146     92     81
D403V8, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            125
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KYNU MUTATED        2      2      0      1      4
  KYNU WILD-TYPE    116    134    115     39     67
D403V9, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KYNU MUTATED        1      2      4      0      2
  KYNU WILD-TYPE     47    107    126    101     90
D403V10, multiclass
        clus
vv       KYNU MUTATED KYNU WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(404) Variable = MIA2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MIA2 MUTATED        2      2      0      7
  MIA2 WILD-TYPE    133     90    172    169
D404V1, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA2 MUTATED        6      3      0
  MIA2 WILD-TYPE    209    152    162
D404V2, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            3            152
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MIA2 MUTATED        7      2      0      1
  MIA2 WILD-TYPE    128    122    125     59
D404V3, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA2 MUTATED        9      1      0
  MIA2 WILD-TYPE    244    101     89
D404V4, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA2 MUTATED        2      8      1
  MIA2 WILD-TYPE    162    239    142
D404V5, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA2 MUTATED        2      2      6      1      0
  MIA2 WILD-TYPE    119    102     85    120    117
D404V6, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            6             85
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA2 MUTATED        3      8      0
  MIA2 WILD-TYPE    156    243    165
D404V7, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            8            243
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA2 MUTATED        2      5      3      1      0
  MIA2 WILD-TYPE    116    126    148     93     81
D404V8, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA2 MUTATED        2      2      0      3      1
  MIA2 WILD-TYPE    116    134    115     37     70
D404V9, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            3             37
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA2 MUTATED        3      3      1      0      1
  MIA2 WILD-TYPE     45    106    129    101     91
D404V10, multiclass
        clus
vv       MIA2 MUTATED MIA2 WILD-TYPE
  CLUS_1            3             45
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(405) Variable = PHF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHF1 MUTATED        2      0      1      6
  PHF1 WILD-TYPE    133     92    171    170
D405V1, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PHF1 MUTATED        6      1      0
  PHF1 WILD-TYPE    209    154    162
D405V2, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHF1 MUTATED        4      2      0      0
  PHF1 WILD-TYPE    131    122    125     60
D405V3, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PHF1 MUTATED        4      2      0
  PHF1 WILD-TYPE    249    100     89
D405V4, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PHF1 MUTATED        1      8      0
  PHF1 WILD-TYPE    163    239    143
D405V5, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF1 MUTATED        0      3      5      1      0
  PHF1 WILD-TYPE    121    101     86    120    117
D405V6, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PHF1 MUTATED        1      8      0
  PHF1 WILD-TYPE    158    243    165
D405V7, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            8            243
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF1 MUTATED        1      7      0      1      0
  PHF1 WILD-TYPE    117    124    151     93     81
D405V8, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            7            124
  CLUS_3            0            151
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF1 MUTATED        1      5      0      1      0
  PHF1 WILD-TYPE    117    131    115     39     71
D405V9, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF1 MUTATED        0      6      0      0      1
  PHF1 WILD-TYPE     48    103    130    101     91
D405V10, multiclass
        clus
vv       PHF1 MUTATED PHF1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            0            130
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(406) Variable = TMEFF2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEFF2 MUTATED        2      1      2      8
  TMEFF2 WILD-TYPE    133     91    170    168
D406V1, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEFF2 MUTATED        7      2      3
  TMEFF2 WILD-TYPE    208    153    159
D406V2, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEFF2 MUTATED        3      6      1      2
  TMEFF2 WILD-TYPE    132    118    124     58
D406V3, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEFF2 MUTATED        6      5      1
  TMEFF2 WILD-TYPE    247     97     88
D406V4, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEFF2 MUTATED        3      7      3
  TMEFF2 WILD-TYPE    161    240    140
D406V5, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEFF2 MUTATED        0      3      5      2      3
  TMEFF2 WILD-TYPE    121    101     86    119    114
D406V6, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              5               86
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEFF2 MUTATED        2      8      3
  TMEFF2 WILD-TYPE    157    243    162
D406V7, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEFF2 MUTATED        0      5      6      2      0
  TMEFF2 WILD-TYPE    118    126    145     92     81
D406V8, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              6              145
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEFF2 MUTATED        2      5      0      0      5
  TMEFF2 WILD-TYPE    116    131    115     40     66
D406V9, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEFF2 MUTATED        0      4      6      0      2
  TMEFF2 WILD-TYPE     48    105    124    101     90
D406V10, multiclass
        clus
vv       TMEFF2 MUTATED TMEFF2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              6              124
  CLUS_4              0              101
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(407) Variable = FAM83E MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83E MUTATED        1      0      2     11
  FAM83E WILD-TYPE    134     92    170    165
D407V1, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83E MUTATED        9      1      3
  FAM83E WILD-TYPE    206    154    159
D407V2, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM83E MUTATED        5      5      1      1
  FAM83E WILD-TYPE    130    119    124     59
D407V3, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              5              130
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83E MUTATED        9      2      1
  FAM83E WILD-TYPE    244    100     88
D407V4, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83E MUTATED        2      9      3
  FAM83E WILD-TYPE    162    238    140
D407V5, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              2              162
  CLUS_2              9              238
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM83E MUTATED        0      3      8      1      2
  FAM83E WILD-TYPE    121    101     83    120    115
D407V6, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM83E MUTATED        1     11      3
  FAM83E WILD-TYPE    158    240    162
D407V7, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              1              158
  CLUS_2             11              240
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM83E MUTATED        1      9      3      1      1
  FAM83E WILD-TYPE    117    122    148     93     80
D407V8, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              1              117
  CLUS_2              9              122
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM83E MUTATED        1      5      2      1      3
  FAM83E WILD-TYPE    117    131    113     39     68
D407V9, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM83E MUTATED        0      7      3      1      1
  FAM83E WILD-TYPE     48    102    127    100     91
D407V10, multiclass
        clus
vv       FAM83E MUTATED FAM83E WILD-TYPE
  CLUS_1              0               48
  CLUS_2              7              102
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(408) Variable = PPP3CA MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP3CA MUTATED        2      1      2      8
  PPP3CA WILD-TYPE    133     91    170    168
D408V1, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PPP3CA MUTATED        6      2      2
  PPP3CA WILD-TYPE    209    153    160
D408V2, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              6              209
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP3CA MUTATED        2      5      0      3
  PPP3CA WILD-TYPE    133    119    125     57
D408V3, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PPP3CA MUTATED        7      2      1
  PPP3CA WILD-TYPE    246    100     88
D408V4, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              7              246
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PPP3CA MUTATED        2      7      3
  PPP3CA WILD-TYPE    162    240    140
D408V5, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP3CA MUTATED        1      2      5      1      3
  PPP3CA WILD-TYPE    120    102     86    120    114
D408V6, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PPP3CA MUTATED        2      9      2
  PPP3CA WILD-TYPE    157    242    163
D408V7, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              2              157
  CLUS_2              9              242
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP3CA MUTATED        2      5      4      1      1
  PPP3CA WILD-TYPE    116    126    147     93     80
D408V8, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP3CA MUTATED        1      4      1      1      2
  PPP3CA WILD-TYPE    117    132    114     39     69
D408V9, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP3CA MUTATED        0      2      6      0      1
  PPP3CA WILD-TYPE     48    107    124    101     91
D408V10, multiclass
        clus
vv       PPP3CA MUTATED PPP3CA WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              6              124
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(409) Variable = RASAL2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASAL2 MUTATED        1      2      3     16
  RASAL2 WILD-TYPE    134     90    169    160
D409V1, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASAL2 MUTATED       13      1      4
  RASAL2 WILD-TYPE    202    154    158
D409V2, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1             13              202
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASAL2 MUTATED        6      5      5      2
  RASAL2 WILD-TYPE    129    119    120     58
D409V3, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              5              119
  CLUS_3              5              120
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASAL2 MUTATED        8      6      4
  RASAL2 WILD-TYPE    245     96     85
D409V4, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              6               96
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASAL2 MUTATED        3     11      7
  RASAL2 WILD-TYPE    161    236    136
D409V5, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             11              236
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASAL2 MUTATED        2      2     12      1      4
  RASAL2 WILD-TYPE    119    102     79    120    113
D409V6, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3             12               79
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASAL2 MUTATED        1     16      6
  RASAL2 WILD-TYPE    158    235    159
D409V7, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             16              235
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASAL2 MUTATED        1      8      8      1      5
  RASAL2 WILD-TYPE    117    123    143     93     76
D409V8, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              123
  CLUS_3              8              143
  CLUS_4              1               93
  CLUS_5              5               76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASAL2 MUTATED        1      6      2      2      6
  RASAL2 WILD-TYPE    117    130    113     38     65
D409V9, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASAL2 MUTATED        1      5      8      2      1
  RASAL2 WILD-TYPE     47    104    122     99     91
D409V10, multiclass
        clus
vv       RASAL2 MUTATED RASAL2 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(410) Variable = RRS1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRS1 MUTATED        2      2      2      4
  RRS1 WILD-TYPE    133     90    170    172
D410V1, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RRS1 MUTATED        6      2      0
  RRS1 WILD-TYPE    209    153    162
D410V2, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRS1 MUTATED        3      2      0      2
  RRS1 WILD-TYPE    132    122    125     58
D410V3, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RRS1 MUTATED        4      3      0
  RRS1 WILD-TYPE    249     99     89
D410V4, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RRS1 MUTATED        2      6      2
  RRS1 WILD-TYPE    162    241    141
D410V5, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            6            241
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRS1 MUTATED        2      0      6      2      0
  RRS1 WILD-TYPE    119    104     85    119    117
D410V6, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RRS1 MUTATED        3      7      0
  RRS1 WILD-TYPE    156    244    165
D410V7, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            7            244
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRS1 MUTATED        1      5      2      2      0
  RRS1 WILD-TYPE    117    126    149     92     81
D410V8, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            2            149
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRS1 MUTATED        3      3      0      0      2
  RRS1 WILD-TYPE    115    133    115     40     69
D410V9, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRS1 MUTATED        1      2      3      0      2
  RRS1 WILD-TYPE     47    107    127    101     90
D410V10, multiclass
        clus
vv       RRS1 MUTATED RRS1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(411) Variable = RBM6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBM6 MUTATED        2      0      4     20
  RBM6 WILD-TYPE    133     92    168    156
D411V1, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4           20            156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBM6 MUTATED       12      1      6
  RBM6 WILD-TYPE    203    154    156
D411V2, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            1            154
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBM6 MUTATED       11      8      5      1
  RBM6 WILD-TYPE    124    116    120     59
D411V3, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1           11            124
  CLUS_2            8            116
  CLUS_3            5            120
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBM6 MUTATED       14      7      4
  RBM6 WILD-TYPE    239     95     85
D411V4, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1           14            239
  CLUS_2            7             95
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBM6 MUTATED        5     10      9
  RBM6 WILD-TYPE    159    237    134
D411V5, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            5            159
  CLUS_2           10            237
  CLUS_3            9            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM6 MUTATED        2      5      9      2      6
  RBM6 WILD-TYPE    119     99     82    119    111
D411V6, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            5             99
  CLUS_3            9             82
  CLUS_4            2            119
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBM6 MUTATED        3     16      7
  RBM6 WILD-TYPE    156    235    158
D411V7, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           16            235
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM6 MUTATED        1      9      9      2      5
  RBM6 WILD-TYPE    117    122    142     92     76
D411V8, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            9            122
  CLUS_3            9            142
  CLUS_4            2             92
  CLUS_5            5             76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM6 MUTATED        3      3      3      2      6
  RBM6 WILD-TYPE    115    133    112     38     65
D411V9, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            3            133
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM6 MUTATED        2      5      6      2      2
  RBM6 WILD-TYPE     46    104    124     99     90
D411V10, multiclass
        clus
vv       RBM6 MUTATED RBM6 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            5            104
  CLUS_3            6            124
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(412) Variable = AXIN2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AXIN2 MUTATED        4      2      3     13
  AXIN2 WILD-TYPE    131     90    169    163
D412V1, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN2 MUTATED       13      3      3
  AXIN2 WILD-TYPE    202    152    159
D412V2, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AXIN2 MUTATED        6      5      4      2
  AXIN2 WILD-TYPE    129    119    121     58
D412V3, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             5             119
  CLUS_3             4             121
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN2 MUTATED       10      2      5
  AXIN2 WILD-TYPE    243    100     84
D412V4, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             2             100
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN2 MUTATED        3     10      8
  AXIN2 WILD-TYPE    161    237    135
D412V5, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            10             237
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN2 MUTATED        2      4      7      2      6
  AXIN2 WILD-TYPE    119    100     84    119    111
D412V6, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN2 MUTATED        4     12      6
  AXIN2 WILD-TYPE    155    239    159
D412V7, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN2 MUTATED        4      9      5      1      3
  AXIN2 WILD-TYPE    114    122    146     93     78
D412V8, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             122
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN2 MUTATED        2      6      5      2      4
  AXIN2 WILD-TYPE    116    130    110     38     67
D412V9, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             5             110
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN2 MUTATED        0      5      9      4      1
  AXIN2 WILD-TYPE     48    104    121     97     91
D412V10, multiclass
        clus
vv       AXIN2 MUTATED AXIN2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             9             121
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(413) Variable = TFE3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TFE3 MUTATED        1      2      1      6
  TFE3 WILD-TYPE    134     90    171    170
D413V1, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TFE3 MUTATED        7      1      1
  TFE3 WILD-TYPE    208    154    161
D413V2, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TFE3 MUTATED        3      3      1      0
  TFE3 WILD-TYPE    132    121    124     60
D413V3, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TFE3 MUTATED        5      1      1
  TFE3 WILD-TYPE    248    101     88
D413V4, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TFE3 MUTATED        0      9      1
  TFE3 WILD-TYPE    164    238    142
D413V5, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            9            238
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TFE3 MUTATED        1      3      6      0      0
  TFE3 WILD-TYPE    120    101     85    121    117
D413V6, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TFE3 MUTATED        1      9      0
  TFE3 WILD-TYPE    158    242    165
D413V7, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            9            242
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TFE3 MUTATED        1      7      2      0      0
  TFE3 WILD-TYPE    117    124    149     94     81
D413V8, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            7            124
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TFE3 MUTATED        1      4      0      1      2
  TFE3 WILD-TYPE    117    132    115     39     69
D413V9, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TFE3 MUTATED        0      6      2      0      0
  TFE3 WILD-TYPE     48    103    128    101     92
D413V10, multiclass
        clus
vv       TFE3 MUTATED TFE3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(414) Variable = RPL22 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL22 MUTATED        1      0      0      8
  RPL22 WILD-TYPE    134     92    172    168
D414V1, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPL22 MUTATED        4      1      3
  RPL22 WILD-TYPE    211    154    159
D414V2, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPL22 MUTATED        3      4      1      0
  RPL22 WILD-TYPE    132    120    124     60
D414V3, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPL22 MUTATED        5      2      1
  RPL22 WILD-TYPE    248    100     88
D414V4, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPL22 MUTATED        1      5      2
  RPL22 WILD-TYPE    163    242    141
D414V5, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPL22 MUTATED        0      1      6      0      1
  RPL22 WILD-TYPE    121    103     85    121    116
D414V6, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPL22 MUTATED        0      6      3
  RPL22 WILD-TYPE    159    245    162
D414V7, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPL22 MUTATED        1      4      2      0      2
  RPL22 WILD-TYPE    117    127    149     94     79
D414V8, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPL22 MUTATED        0      2      2      1      2
  RPL22 WILD-TYPE    118    134    113     39     69
D414V9, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPL22 MUTATED        1      2      1      3      0
  RPL22 WILD-TYPE     47    107    129     98     92
D414V10, multiclass
        clus
vv       RPL22 MUTATED RPL22 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             1             129
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(415) Variable = CDC5L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC5L MUTATED        3      0      2     11
  CDC5L WILD-TYPE    132     92    170    165
D415V1, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDC5L MUTATED        9      1      3
  CDC5L WILD-TYPE    206    154    159
D415V2, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC5L MUTATED        5      6      1      0
  CDC5L WILD-TYPE    130    118    124     60
D415V3, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             5             130
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDC5L MUTATED        8      3      1
  CDC5L WILD-TYPE    245     99     88
D415V4, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             8             245
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDC5L MUTATED        3      7      6
  CDC5L WILD-TYPE    161    240    137
D415V5, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC5L MUTATED        3      2      7      0      4
  CDC5L WILD-TYPE    118    102     84    121    113
D415V6, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             3             118
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDC5L MUTATED        3     12      2
  CDC5L WILD-TYPE    156    239    163
D415V7, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             3             156
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC5L MUTATED        3      5      7      0      2
  CDC5L WILD-TYPE    115    126    144     94     79
D415V8, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             126
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC5L MUTATED        2      5      1      1      4
  CDC5L WILD-TYPE    116    131    114     39     67
D415V9, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC5L MUTATED        3      3      5      2      0
  CDC5L WILD-TYPE     45    106    125     99     92
D415V10, multiclass
        clus
vv       CDC5L MUTATED CDC5L WILD-TYPE
  CLUS_1             3              45
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(416) Variable = SYNCRIP MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYNCRIP MUTATED        3      2      4      8
  SYNCRIP WILD-TYPE    132     90    168    168
D416V1, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               4               168
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SYNCRIP MUTATED        9      3      3
  SYNCRIP WILD-TYPE    206    152    159
D416V2, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               9               206
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYNCRIP MUTATED        6      7      2      1
  SYNCRIP WILD-TYPE    129    117    123     59
D416V3, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               6               129
  CLUS_2               7               117
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SYNCRIP MUTATED       13      3      0
  SYNCRIP WILD-TYPE    240     99     89
D416V4, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1              13               240
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SYNCRIP MUTATED        4      9      2
  SYNCRIP WILD-TYPE    160    238    141
D416V5, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               4               160
  CLUS_2               9               238
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNCRIP MUTATED        5      2      5      1      2
  SYNCRIP WILD-TYPE    116    102     86    120    115
D416V6, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               5               116
  CLUS_2               2               102
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SYNCRIP MUTATED        4     11      2
  SYNCRIP WILD-TYPE    155    240    163
D416V7, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               4               155
  CLUS_2              11               240
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNCRIP MUTATED        4      5      5      1      2
  SYNCRIP WILD-TYPE    114    126    146     93     79
D416V8, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               4               114
  CLUS_2               5               126
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNCRIP MUTATED        3      5      0      3      3
  SYNCRIP WILD-TYPE    115    131    115     37     68
D416V9, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               3               115
  CLUS_2               5               131
  CLUS_3               0               115
  CLUS_4               3                37
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYNCRIP MUTATED        4      3      3      3      1
  SYNCRIP WILD-TYPE     44    106    127     98     91
D416V10, multiclass
        clus
vv       SYNCRIP MUTATED SYNCRIP WILD-TYPE
  CLUS_1               4                44
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(417) Variable = CRYGA MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRYGA MUTATED        1      0      1      9
  CRYGA WILD-TYPE    134     92    171    167
D417V1, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CRYGA MUTATED        8      0      3
  CRYGA WILD-TYPE    207    155    159
D417V2, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRYGA MUTATED        5      3      0      1
  CRYGA WILD-TYPE    130    121    125     59
D417V3, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CRYGA MUTATED        7      2      0
  CRYGA WILD-TYPE    246    100     89
D417V4, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CRYGA MUTATED        1      4      5
  CRYGA WILD-TYPE    163    243    138
D417V5, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYGA MUTATED        2      1      4      0      3
  CRYGA WILD-TYPE    119    103     87    121    114
D417V6, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CRYGA MUTATED        1      7      3
  CRYGA WILD-TYPE    158    244    162
D417V7, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYGA MUTATED        0      5      4      0      2
  CRYGA WILD-TYPE    118    126    147     94     79
D417V8, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYGA MUTATED        0      2      2      1      4
  CRYGA WILD-TYPE    118    134    113     39     67
D417V9, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYGA MUTATED        1      3      3      2      0
  CRYGA WILD-TYPE     47    106    127     99     92
D417V10, multiclass
        clus
vv       CRYGA MUTATED CRYGA WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(418) Variable = SF3B2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SF3B2 MUTATED        1      2      1     16
  SF3B2 WILD-TYPE    134     90    171    160
D418V1, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B2 MUTATED       11      3      3
  SF3B2 WILD-TYPE    204    152    159
D418V2, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SF3B2 MUTATED        4      6      1      4
  SF3B2 WILD-TYPE    131    118    124     56
D418V3, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B2 MUTATED       11      3      1
  SF3B2 WILD-TYPE    242     99     88
D418V4, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B2 MUTATED        3      9      6
  SF3B2 WILD-TYPE    161    238    137
D418V5, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             9             238
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B2 MUTATED        1      3      8      2      4
  SF3B2 WILD-TYPE    120    101     83    119    113
D418V6, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SF3B2 MUTATED        1     13      6
  SF3B2 WILD-TYPE    158    238    159
D418V7, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            13             238
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B2 MUTATED        1      8      8      1      2
  SF3B2 WILD-TYPE    117    123    143     93     79
D418V8, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             8             143
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B2 MUTATED        2      5      2      2      5
  SF3B2 WILD-TYPE    116    131    113     38     66
D418V9, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SF3B2 MUTATED        1      7      5      2      1
  SF3B2 WILD-TYPE     47    102    125     99     91
D418V10, multiclass
        clus
vv       SF3B2 MUTATED SF3B2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(419) Variable = FAM113B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM113B MUTATED        1      1      3     11
  FAM113B WILD-TYPE    134     91    169    165
D419V1, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113B MUTATED       11      0      4
  FAM113B WILD-TYPE    204    155    158
D419V2, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1              11               204
  CLUS_2               0               155
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM113B MUTATED        4      6      2      1
  FAM113B WILD-TYPE    131    118    123     59
D419V3, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               4               131
  CLUS_2               6               118
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113B MUTATED        6      5      2
  FAM113B WILD-TYPE    247     97     87
D419V4, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               6               247
  CLUS_2               5                97
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113B MUTATED        3      7      6
  FAM113B WILD-TYPE    161    240    137
D419V5, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               3               161
  CLUS_2               7               240
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113B MUTATED        0      2      8      1      5
  FAM113B WILD-TYPE    121    102     83    120    112
D419V6, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               8                83
  CLUS_4               1               120
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113B MUTATED        1     12      4
  FAM113B WILD-TYPE    158    239    161
D419V7, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               1               158
  CLUS_2              12               239
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113B MUTATED        2      7      7      0      1
  FAM113B WILD-TYPE    116    124    144     94     80
D419V8, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               2               116
  CLUS_2               7               124
  CLUS_3               7               144
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113B MUTATED        0      5      1      3      6
  FAM113B WILD-TYPE    118    131    114     37     65
D419V9, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               1               114
  CLUS_4               3                37
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113B MUTATED        1      5      8      1      0
  FAM113B WILD-TYPE     47    104    122    100     92
D419V10, multiclass
        clus
vv       FAM113B MUTATED FAM113B WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               8               122
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(420) Variable = PTPN4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN4 MUTATED        2      3      3      8
  PTPN4 WILD-TYPE    133     89    169    168
D420V1, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN4 MUTATED        8      3      1
  PTPN4 WILD-TYPE    207    152    161
D420V2, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN4 MUTATED        3      4      3      3
  PTPN4 WILD-TYPE    132    120    122     57
D420V3, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN4 MUTATED        8      2      3
  PTPN4 WILD-TYPE    245    100     86
D420V4, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN4 MUTATED        4      7      5
  PTPN4 WILD-TYPE    160    240    138
D420V5, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             7             240
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN4 MUTATED        1      3      7      3      2
  PTPN4 WILD-TYPE    120    101     84    118    115
D420V6, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN4 MUTATED        4     10      3
  PTPN4 WILD-TYPE    155    241    162
D420V7, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN4 MUTATED        1      5      7      3      1
  PTPN4 WILD-TYPE    117    126    144     91     80
D420V8, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN4 MUTATED        2      4      3      1      2
  PTPN4 WILD-TYPE    116    132    112     39     69
D420V9, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN4 MUTATED        1      3      5      0      3
  PTPN4 WILD-TYPE     47    106    125    101     89
D420V10, multiclass
        clus
vv       PTPN4 MUTATED PTPN4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(421) Variable = RNF111 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNF111 MUTATED        0      2      4     11
  RNF111 WILD-TYPE    135     90    168    165
D421V1, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF111 MUTATED        7      4      2
  RNF111 WILD-TYPE    208    151    160
D421V2, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              4              151
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNF111 MUTATED        6      8      1      1
  RNF111 WILD-TYPE    129    116    124     59
D421V3, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              8              116
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF111 MUTATED       13      1      2
  RNF111 WILD-TYPE    240    101     87
D421V4, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF111 MUTATED        4      8      5
  RNF111 WILD-TYPE    160    239    138
D421V5, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              8              239
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF111 MUTATED        2      1      7      4      3
  RNF111 WILD-TYPE    119    103     84    117    114
D421V6, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              1              103
  CLUS_3              7               84
  CLUS_4              4              117
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RNF111 MUTATED        4     11      3
  RNF111 WILD-TYPE    155    240    162
D421V7, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             11              240
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF111 MUTATED        2      6      5      4      1
  RNF111 WILD-TYPE    116    125    146     90     80
D421V8, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              125
  CLUS_3              5              146
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF111 MUTATED        4      4      2      1      2
  RNF111 WILD-TYPE    114    132    113     39     69
D421V9, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNF111 MUTATED        2      3      4      0      4
  RNF111 WILD-TYPE     46    106    126    101     88
D421V10, multiclass
        clus
vv       RNF111 MUTATED RNF111 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(422) Variable = LAT2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LAT2 MUTATED        3      0      2      6
  LAT2 WILD-TYPE    132     92    170    170
D422V1, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LAT2 MUTATED        5      2      3
  LAT2 WILD-TYPE    210    153    159
D422V2, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LAT2 MUTATED        6      2      2      1
  LAT2 WILD-TYPE    129    122    123     59
D422V3, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            2            122
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LAT2 MUTATED        9      0      2
  LAT2 WILD-TYPE    244    102     87
D422V4, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LAT2 MUTATED        2      3      3
  LAT2 WILD-TYPE    162    244    140
D422V5, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LAT2 MUTATED        0      3      1      2      2
  LAT2 WILD-TYPE    121    101     90    119    115
D422V6, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            1             90
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LAT2 MUTATED        2      4      5
  LAT2 WILD-TYPE    157    247    160
D422V7, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            4            247
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LAT2 MUTATED        2      2      3      1      3
  LAT2 WILD-TYPE    116    129    148     93     78
D422V8, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            129
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LAT2 MUTATED        1      2      4      0      2
  LAT2 WILD-TYPE    117    134    111     40     69
D422V9, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            4            111
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LAT2 MUTATED        0      3      3      2      1
  LAT2 WILD-TYPE     48    106    127     99     91
D422V10, multiclass
        clus
vv       LAT2 MUTATED LAT2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(423) Variable = ENTPD2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ENTPD2 MUTATED        0      0      2      5
  ENTPD2 WILD-TYPE    135     92    170    171
D423V1, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ENTPD2 MUTATED        4      0      2
  ENTPD2 WILD-TYPE    211    155    160
D423V2, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ENTPD2 MUTATED        3      2      0      0
  ENTPD2 WILD-TYPE    132    122    125     60
D423V3, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ENTPD2 MUTATED        3      1      1
  ENTPD2 WILD-TYPE    250    101     88
D423V4, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ENTPD2 MUTATED        0      3      4
  ENTPD2 WILD-TYPE    164    244    139
D423V5, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ENTPD2 MUTATED        1      2      1      0      3
  ENTPD2 WILD-TYPE    120    102     90    121    114
D423V6, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ENTPD2 MUTATED        1      4      2
  ENTPD2 WILD-TYPE    158    247    163
D423V7, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              4              247
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ENTPD2 MUTATED        1      2      3      0      1
  ENTPD2 WILD-TYPE    117    129    148     94     80
D423V8, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ENTPD2 MUTATED        0      2      2      0      1
  ENTPD2 WILD-TYPE    118    134    113     40     70
D423V9, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ENTPD2 MUTATED        0      1      3      1      0
  ENTPD2 WILD-TYPE     48    108    127    100     92
D423V10, multiclass
        clus
vv       ENTPD2 MUTATED ENTPD2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(424) Variable = CUL2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUL2 MUTATED        1      0      0      9
  CUL2 WILD-TYPE    134     92    172    167
D424V1, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL2 MUTATED        6      1      2
  CUL2 WILD-TYPE    209    154    160
D424V2, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUL2 MUTATED        3      6      1      0
  CUL2 WILD-TYPE    132    118    124     60
D424V3, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            6            118
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL2 MUTATED        7      3      0
  CUL2 WILD-TYPE    246     99     89
D424V4, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL2 MUTATED        2      4      3
  CUL2 WILD-TYPE    162    243    140
D424V5, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL2 MUTATED        0      2      6      0      1
  CUL2 WILD-TYPE    121    102     85    121    116
D424V6, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL2 MUTATED        1      8      1
  CUL2 WILD-TYPE    158    243    164
D424V7, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            8            243
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL2 MUTATED        0      3      6      0      1
  CUL2 WILD-TYPE    118    128    145     94     80
D424V8, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            6            145
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL2 MUTATED        0      3      1      2      2
  CUL2 WILD-TYPE    118    133    114     38     69
D424V9, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL2 MUTATED        0      3      3      2      0
  CUL2 WILD-TYPE     48    106    127     99     92
D424V10, multiclass
        clus
vv       CUL2 MUTATED CUL2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(425) Variable = CROT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CROT MUTATED        2      0      3     12
  CROT WILD-TYPE    133     92    169    164
D425V1, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CROT MUTATED       10      1      4
  CROT WILD-TYPE    205    154    158
D425V2, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CROT MUTATED        6      8      0      1
  CROT WILD-TYPE    129    116    125     59
D425V3, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            6            129
  CLUS_2            8            116
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CROT MUTATED       12      3      0
  CROT WILD-TYPE    241     99     89
D425V4, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1           12            241
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CROT MUTATED        4      9      3
  CROT WILD-TYPE    160    238    140
D425V5, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            4            160
  CLUS_2            9            238
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CROT MUTATED        0      3      8      1      4
  CROT WILD-TYPE    121    101     83    120    113
D425V6, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            8             83
  CLUS_4            1            120
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CROT MUTATED        2     12      3
  CROT WILD-TYPE    157    239    162
D425V7, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            2            157
  CLUS_2           12            239
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CROT MUTATED        1      7      7      1      1
  CROT WILD-TYPE    117    124    144     93     80
D425V8, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            7            124
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CROT MUTATED        1      5      2      2      2
  CROT WILD-TYPE    117    131    113     38     69
D425V9, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CROT MUTATED        1      5      3      2      1
  CROT WILD-TYPE     47    104    127     99     91
D425V10, multiclass
        clus
vv       CROT MUTATED CROT WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(426) Variable = PDS5B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDS5B MUTATED        1      3      9     14
  PDS5B WILD-TYPE    134     89    163    162
D426V1, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             9             163
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5B MUTATED       13      7      3
  PDS5B WILD-TYPE    202    148    159
D426V2, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1            13             202
  CLUS_2             7             148
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDS5B MUTATED        8      8      4      1
  PDS5B WILD-TYPE    127    116    121     59
D426V3, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             8             127
  CLUS_2             8             116
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5B MUTATED       14      5      2
  PDS5B WILD-TYPE    239     97     87
D426V4, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1            14             239
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5B MUTATED       12      9      4
  PDS5B WILD-TYPE    152    238    139
D426V5, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1            12             152
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5B MUTATED        3      2      8      7      5
  PDS5B WILD-TYPE    118    102     83    114    112
D426V6, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             3             118
  CLUS_2             2             102
  CLUS_3             8              83
  CLUS_4             7             114
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5B MUTATED        9     13      5
  PDS5B WILD-TYPE    150    238    160
D426V7, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             9             150
  CLUS_2            13             238
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5B MUTATED        1      8      8      8      2
  PDS5B WILD-TYPE    117    123    143     86     79
D426V8, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             8             143
  CLUS_4             8              86
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5B MUTATED        6      4      2      5      3
  PDS5B WILD-TYPE    112    132    113     35     68
D426V9, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             6             112
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             5              35
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5B MUTATED        1      5      5      1      8
  PDS5B WILD-TYPE     47    104    125    100     84
D426V10, multiclass
        clus
vv       PDS5B MUTATED PDS5B WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             8              84
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(427) Variable = MTMR6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR6 MUTATED        1      1      2      9
  MTMR6 WILD-TYPE    134     91    170    167
D427V1, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR6 MUTATED        9      1      2
  MTMR6 WILD-TYPE    206    154    160
D427V2, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTMR6 MUTATED        3      4      2      2
  MTMR6 WILD-TYPE    132    120    123     58
D427V3, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR6 MUTATED        7      1      3
  MTMR6 WILD-TYPE    246    101     86
D427V4, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR6 MUTATED        2      8      3
  MTMR6 WILD-TYPE    162    239    140
D427V5, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR6 MUTATED        3      5      3      0      2
  MTMR6 WILD-TYPE    118     99     88    121    115
D427V6, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTMR6 MUTATED        2      9      2
  MTMR6 WILD-TYPE    157    242    163
D427V7, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR6 MUTATED        2      4      6      0      1
  MTMR6 WILD-TYPE    116    127    145     94     80
D427V8, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR6 MUTATED        1      3      0      1      5
  MTMR6 WILD-TYPE    117    133    115     39     66
D427V9, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTMR6 MUTATED        3      3      4      0      0
  MTMR6 WILD-TYPE     45    106    126    101     92
D427V10, multiclass
        clus
vv       MTMR6 MUTATED MTMR6 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(428) Variable = SYCP2L MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYCP2L MUTATED        1      1      4     11
  SYCP2L WILD-TYPE    134     91    168    165
D428V1, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SYCP2L MUTATED        7      2      5
  SYCP2L WILD-TYPE    208    153    157
D428V2, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              7              208
  CLUS_2              2              153
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYCP2L MUTATED        2      9      3      0
  SYCP2L WILD-TYPE    133    115    122     60
D428V3, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              2              133
  CLUS_2              9              115
  CLUS_3              3              122
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SYCP2L MUTATED        7      4      3
  SYCP2L WILD-TYPE    246     98     86
D428V4, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              7              246
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SYCP2L MUTATED        3     12      2
  SYCP2L WILD-TYPE    161    235    141
D428V5, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              3              161
  CLUS_2             12              235
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP2L MUTATED        1      7      4      3      2
  SYCP2L WILD-TYPE    120     97     87    118    115
D428V6, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              1              120
  CLUS_2              7               97
  CLUS_3              4               87
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SYCP2L MUTATED        3     10      4
  SYCP2L WILD-TYPE    156    241    161
D428V7, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              3              156
  CLUS_2             10              241
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP2L MUTATED        3      5      3      3      3
  SYCP2L WILD-TYPE    115    126    148     91     78
D428V8, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              126
  CLUS_3              3              148
  CLUS_4              3               91
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP2L MUTATED        3      4      4      0      3
  SYCP2L WILD-TYPE    115    132    111     40     68
D428V9, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              132
  CLUS_3              4              111
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYCP2L MUTATED        1      3      4      3      3
  SYCP2L WILD-TYPE     47    106    126     98     89
D428V10, multiclass
        clus
vv       SYCP2L MUTATED SYCP2L WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              3               98
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(429) Variable = NUB1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUB1 MUTATED        3      1      1      7
  NUB1 WILD-TYPE    132     91    171    169
D429V1, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NUB1 MUTATED        8      3      1
  NUB1 WILD-TYPE    207    152    161
D429V2, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUB1 MUTATED        5      3      0      0
  NUB1 WILD-TYPE    130    121    125     60
D429V3, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NUB1 MUTATED        6      2      0
  NUB1 WILD-TYPE    247    100     89
D429V4, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NUB1 MUTATED        3      9      0
  NUB1 WILD-TYPE    161    238    143
D429V5, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            9            238
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUB1 MUTATED        1      2      7      2      0
  NUB1 WILD-TYPE    120    102     84    119    117
D429V6, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NUB1 MUTATED        2     10      0
  NUB1 WILD-TYPE    157    241    165
D429V7, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           10            241
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUB1 MUTATED        1      6      3      2      0
  NUB1 WILD-TYPE    117    125    148     92     81
D429V8, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            125
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUB1 MUTATED        2      6      0      2      1
  NUB1 WILD-TYPE    116    130    115     38     70
D429V9, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            130
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUB1 MUTATED        1      7      2      0      1
  NUB1 WILD-TYPE     47    102    128    101     91
D429V10, multiclass
        clus
vv       NUB1 MUTATED NUB1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            7            102
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(430) Variable = ZFHX3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFHX3 MUTATED        8      3      8     27
  ZFHX3 WILD-TYPE    127     89    164    149
D430V1, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             3              89
  CLUS_3             8             164
  CLUS_4            27             149
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZFHX3 MUTATED       23      9      6
  ZFHX3 WILD-TYPE    192    146    156
D430V2, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1            23             192
  CLUS_2             9             146
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFHX3 MUTATED       13     19      3      4
  ZFHX3 WILD-TYPE    122    105    122     56
D430V3, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1            13             122
  CLUS_2            19             105
  CLUS_3             3             122
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZFHX3 MUTATED       26     11      2
  ZFHX3 WILD-TYPE    227     91     87
D430V4, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1            26             227
  CLUS_2            11              91
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZFHX3 MUTATED        9     24     10
  ZFHX3 WILD-TYPE    155    223    133
D430V5, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             9             155
  CLUS_2            24             223
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFHX3 MUTATED        5      7     18      5      8
  ZFHX3 WILD-TYPE    116     97     73    116    109
D430V6, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             7              97
  CLUS_3            18              73
  CLUS_4             5             116
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZFHX3 MUTATED        9     29      8
  ZFHX3 WILD-TYPE    150    222    157
D430V7, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             9             150
  CLUS_2            29             222
  CLUS_3             8             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFHX3 MUTATED        7     16     15      4      4
  ZFHX3 WILD-TYPE    111    115    136     90     77
D430V8, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             7             111
  CLUS_2            16             115
  CLUS_3            15             136
  CLUS_4             4              90
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFHX3 MUTATED        6     13      4      4     10
  ZFHX3 WILD-TYPE    112    123    111     36     61
D430V9, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             6             112
  CLUS_2            13             123
  CLUS_3             4             111
  CLUS_4             4              36
  CLUS_5            10              61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFHX3 MUTATED        2     11     14      6      4
  ZFHX3 WILD-TYPE     46     98    116     95     88
D430V10, multiclass
        clus
vv       ZFHX3 MUTATED ZFHX3 WILD-TYPE
  CLUS_1             2              46
  CLUS_2            11              98
  CLUS_3            14             116
  CLUS_4             6              95
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(431) Variable = EVI5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EVI5 MUTATED        0      2      2      9
  EVI5 WILD-TYPE    135     90    170    167
D431V1, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EVI5 MUTATED        7      1      4
  EVI5 WILD-TYPE    208    154    158
D431V2, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EVI5 MUTATED        2      6      1      1
  EVI5 WILD-TYPE    133    118    124     59
D431V3, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            6            118
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EVI5 MUTATED        6      2      2
  EVI5 WILD-TYPE    247    100     87
D431V4, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            2            100
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EVI5 MUTATED        1      5      5
  EVI5 WILD-TYPE    163    242    138
D431V5, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI5 MUTATED        1      3      4      0      3
  EVI5 WILD-TYPE    120    101     87    121    114
D431V6, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EVI5 MUTATED        1      9      3
  EVI5 WILD-TYPE    158    242    162
D431V7, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            9            242
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI5 MUTATED        2      5      5      0      1
  EVI5 WILD-TYPE    116    126    146     94     80
D431V8, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI5 MUTATED        1      3      1      1      6
  EVI5 WILD-TYPE    117    133    114     39     65
D431V9, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI5 MUTATED        2      5      4      1      0
  EVI5 WILD-TYPE     46    104    126    100     92
D431V10, multiclass
        clus
vv       EVI5 MUTATED EVI5 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            5            104
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(432) Variable = TIMP3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIMP3 MUTATED        3      1      2      5
  TIMP3 WILD-TYPE    132     91    170    171
D432V1, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIMP3 MUTATED        8      2      0
  TIMP3 WILD-TYPE    207    153    162
D432V2, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIMP3 MUTATED        4      5      0      0
  TIMP3 WILD-TYPE    131    119    125     60
D432V3, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIMP3 MUTATED        6      3      0
  TIMP3 WILD-TYPE    247     99     89
D432V4, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIMP3 MUTATED        3      8      0
  TIMP3 WILD-TYPE    161    239    143
D432V5, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIMP3 MUTATED        3      2      4      1      1
  TIMP3 WILD-TYPE    118    102     87    120    116
D432V6, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIMP3 MUTATED        1      9      1
  TIMP3 WILD-TYPE    158    242    164
D432V7, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIMP3 MUTATED        2      7      2      0      0
  TIMP3 WILD-TYPE    116    124    149     94     81
D432V8, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIMP3 MUTATED        1      5      0      1      0
  TIMP3 WILD-TYPE    117    131    115     39     71
D432V9, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIMP3 MUTATED        1      4      2      0      0
  TIMP3 WILD-TYPE     47    105    128    101     92
D432V10, multiclass
        clus
vv       TIMP3 MUTATED TIMP3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(433) Variable = EIF4EBP2 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4EBP2 MUTATED        2      0      1      4
  EIF4EBP2 WILD-TYPE    133     92    171    172
D433V1, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  EIF4EBP2 MUTATED        4      1      2
  EIF4EBP2 WILD-TYPE    211    154    160
D433V2, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4EBP2 MUTATED        3      2      0      0
  EIF4EBP2 WILD-TYPE    132    122    125     60
D433V3, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                2                122
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  EIF4EBP2 MUTATED        4      1      0
  EIF4EBP2 WILD-TYPE    249    101     89
D433V4, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                1                101
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  EIF4EBP2 MUTATED        2      5      0
  EIF4EBP2 WILD-TYPE    162    242    143
D433V5, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                5                242
  CLUS_3                0                143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4EBP2 MUTATED        2      2      2      1      0
  EIF4EBP2 WILD-TYPE    119    102     89    120    117
D433V6, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                2                102
  CLUS_3                2                 89
  CLUS_4                1                120
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  EIF4EBP2 MUTATED        1      4      2
  EIF4EBP2 WILD-TYPE    158    247    163
D433V7, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4EBP2 MUTATED        3      2      2      0      0
  EIF4EBP2 WILD-TYPE    115    129    149     94     81
D433V8, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                2                129
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4EBP2 MUTATED        0      2      2      1      1
  EIF4EBP2 WILD-TYPE    118    134    113     39     70
D433V9, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                2                113
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4EBP2 MUTATED        0      3      1      2      0
  EIF4EBP2 WILD-TYPE     48    106    129     99     92
D433V10, multiclass
        clus
vv       EIF4EBP2 MUTATED EIF4EBP2 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                1                129
  CLUS_4                2                 99
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(434) Variable = HOXB7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HOXB7 MUTATED        0      1      3      5
  HOXB7 WILD-TYPE    135     91    169    171
D434V1, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXB7 MUTATED        5      1      3
  HOXB7 WILD-TYPE    210    154    159
D434V2, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HOXB7 MUTATED        2      3      1      1
  HOXB7 WILD-TYPE    133    121    124     59
D434V3, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXB7 MUTATED        4      2      1
  HOXB7 WILD-TYPE    249    100     88
D434V4, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXB7 MUTATED        2      6      1
  HOXB7 WILD-TYPE    162    241    142
D434V5, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXB7 MUTATED        2      2      3      2      0
  HOXB7 WILD-TYPE    119    102     88    119    117
D434V6, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOXB7 MUTATED        1      5      3
  HOXB7 WILD-TYPE    158    246    162
D434V7, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXB7 MUTATED        1      3      3      2      0
  HOXB7 WILD-TYPE    117    128    148     92     81
D434V8, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXB7 MUTATED        0      4      3      1      0
  HOXB7 WILD-TYPE    118    132    112     39     71
D434V9, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOXB7 MUTATED        0      3      2      1      2
  HOXB7 WILD-TYPE     48    106    128    100     90
D434V10, multiclass
        clus
vv       HOXB7 MUTATED HOXB7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(435) Variable = CYP4B1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP4B1 MUTATED        0      1      3      7
  CYP4B1 WILD-TYPE    135     91    169    169
D435V1, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CYP4B1 MUTATED        8      0      2
  CYP4B1 WILD-TYPE    207    155    160
D435V2, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP4B1 MUTATED        3      2      3      1
  CYP4B1 WILD-TYPE    132    122    122     59
D435V3, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CYP4B1 MUTATED        4      1      4
  CYP4B1 WILD-TYPE    249    101     85
D435V4, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CYP4B1 MUTATED        1      7      3
  CYP4B1 WILD-TYPE    163    240    140
D435V5, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP4B1 MUTATED        1      2      4      1      3
  CYP4B1 WILD-TYPE    120    102     87    120    114
D435V6, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CYP4B1 MUTATED        3      6      2
  CYP4B1 WILD-TYPE    156    245    163
D435V7, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              6              245
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP4B1 MUTATED        2      7      2      0      0
  CYP4B1 WILD-TYPE    116    124    149     94     81
D435V8, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              124
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP4B1 MUTATED        1      4      0      2      0
  CYP4B1 WILD-TYPE    117    132    115     38     71
D435V9, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP4B1 MUTATED        1      3      2      1      0
  CYP4B1 WILD-TYPE     47    106    128    100     92
D435V10, multiclass
        clus
vv       CYP4B1 MUTATED CYP4B1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(436) Variable = PTOV1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTOV1 MUTATED        3      0      0     10
  PTOV1 WILD-TYPE    132     92    172    166
D436V1, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTOV1 MUTATED        9      0      3
  PTOV1 WILD-TYPE    206    155    159
D436V2, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTOV1 MUTATED        4      6      2      0
  PTOV1 WILD-TYPE    131    118    123     60
D436V3, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTOV1 MUTATED        9      2      1
  PTOV1 WILD-TYPE    244    100     88
D436V4, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTOV1 MUTATED        0     11      2
  PTOV1 WILD-TYPE    164    236    141
D436V5, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            11             236
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTOV1 MUTATED        0      1     10      0      2
  PTOV1 WILD-TYPE    121    103     81    121    115
D436V6, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3            10              81
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTOV1 MUTATED        1     10      2
  PTOV1 WILD-TYPE    158    241    163
D436V7, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTOV1 MUTATED        0      8      3      0      2
  PTOV1 WILD-TYPE    118    123    148     94     79
D436V8, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             123
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTOV1 MUTATED        0      4      1      1      3
  PTOV1 WILD-TYPE    118    132    114     39     68
D436V9, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTOV1 MUTATED        0      5      3      1      0
  PTOV1 WILD-TYPE     48    104    127    100     92
D436V10, multiclass
        clus
vv       PTOV1 MUTATED PTOV1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(437) Variable = NOBOX MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOBOX MUTATED        0      0      3      9
  NOBOX WILD-TYPE    135     92    169    167
D437V1, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOBOX MUTATED        5      2      1
  NOBOX WILD-TYPE    210    153    161
D437V2, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOBOX MUTATED        4      5      1      1
  NOBOX WILD-TYPE    131    119    124     59
D437V3, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOBOX MUTATED        6      3      2
  NOBOX WILD-TYPE    247     99     87
D437V4, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOBOX MUTATED        5      2      4
  NOBOX WILD-TYPE    159    245    139
D437V5, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             5             159
  CLUS_2             2             245
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOBOX MUTATED        0      1      3      2      5
  NOBOX WILD-TYPE    121    103     88    119    112
D437V6, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOBOX MUTATED        2      7      3
  NOBOX WILD-TYPE    157    244    162
D437V7, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOBOX MUTATED        1      4      4      2      1
  NOBOX WILD-TYPE    117    127    147     92     80
D437V8, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOBOX MUTATED        2      2      1      1      2
  NOBOX WILD-TYPE    116    134    114     39     69
D437V9, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOBOX MUTATED        1      2      2      1      2
  NOBOX WILD-TYPE     47    107    128    100     90
D437V10, multiclass
        clus
vv       NOBOX MUTATED NOBOX WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(438) Variable = SORBS2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SORBS2 MUTATED        2      2      4     19
  SORBS2 WILD-TYPE    133     90    168    157
D438V1, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SORBS2 MUTATED       15      5      4
  SORBS2 WILD-TYPE    200    150    158
D438V2, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              5              150
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SORBS2 MUTATED       10      5      2      4
  SORBS2 WILD-TYPE    125    119    123     56
D438V3, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1             10              125
  CLUS_2              5              119
  CLUS_3              2              123
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SORBS2 MUTATED       17      2      2
  SORBS2 WILD-TYPE    236    100     87
D438V4, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1             17              236
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SORBS2 MUTATED        5     17      5
  SORBS2 WILD-TYPE    159    230    138
D438V5, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              5              159
  CLUS_2             17              230
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SORBS2 MUTATED        4      5     10      4      4
  SORBS2 WILD-TYPE    117     99     81    117    113
D438V6, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              5               99
  CLUS_3             10               81
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SORBS2 MUTATED        6     16      5
  SORBS2 WILD-TYPE    153    235    160
D438V7, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              6              153
  CLUS_2             16              235
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SORBS2 MUTATED        2     11      9      3      2
  SORBS2 WILD-TYPE    116    120    142     91     79
D438V8, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             11              120
  CLUS_3              9              142
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SORBS2 MUTATED        3      8      3      3      5
  SORBS2 WILD-TYPE    115    128    112     37     66
D438V9, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              128
  CLUS_3              3              112
  CLUS_4              3               37
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SORBS2 MUTATED        1     10      5      3      3
  SORBS2 WILD-TYPE     47     99    125     98     89
D438V10, multiclass
        clus
vv       SORBS2 MUTATED SORBS2 WILD-TYPE
  CLUS_1              1               47
  CLUS_2             10               99
  CLUS_3              5              125
  CLUS_4              3               98
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(439) Variable = DNAH5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAH5 MUTATED       13     16     26     50
  DNAH5 WILD-TYPE    122     76    146    126
D439V1, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            13             122
  CLUS_2            16              76
  CLUS_3            26             146
  CLUS_4            50             126
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH5 MUTATED       56     22     19
  DNAH5 WILD-TYPE    159    133    143
D439V2, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            56             159
  CLUS_2            22             133
  CLUS_3            19             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAH5 MUTATED       23     30     22     10
  DNAH5 WILD-TYPE    112     94    103     50
D439V3, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            23             112
  CLUS_2            30              94
  CLUS_3            22             103
  CLUS_4            10              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH5 MUTATED       49     22     14
  DNAH5 WILD-TYPE    204     80     75
D439V4, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            49             204
  CLUS_2            22              80
  CLUS_3            14              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH5 MUTATED       29     54     19
  DNAH5 WILD-TYPE    135    193    124
D439V5, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            29             135
  CLUS_2            54             193
  CLUS_3            19             124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH5 MUTATED       23     21     22     17     19
  DNAH5 WILD-TYPE     98     83     69    104     98
D439V6, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            23              98
  CLUS_2            21              83
  CLUS_3            22              69
  CLUS_4            17             104
  CLUS_5            19              98
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH5 MUTATED       30     55     20
  DNAH5 WILD-TYPE    129    196    145
D439V7, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            30             129
  CLUS_2            55             196
  CLUS_3            20             145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH5 MUTATED       19     29     31     17      9
  DNAH5 WILD-TYPE     99    102    120     77     72
D439V8, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            19              99
  CLUS_2            29             102
  CLUS_3            31             120
  CLUS_4            17              77
  CLUS_5             9              72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH5 MUTATED       18     27     13      6     23
  DNAH5 WILD-TYPE    100    109    102     34     48
D439V9, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1            18             100
  CLUS_2            27             109
  CLUS_3            13             102
  CLUS_4             6              34
  CLUS_5            23              48
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH5 MUTATED        5     19     33     14     16
  DNAH5 WILD-TYPE     43     90     97     87     76
D439V10, multiclass
        clus
vv       DNAH5 MUTATED DNAH5 WILD-TYPE
  CLUS_1             5              43
  CLUS_2            19              90
  CLUS_3            33              97
  CLUS_4            14              87
  CLUS_5            16              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(440) Variable = CLMN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLMN MUTATED        3      1      0     13
  CLMN WILD-TYPE    132     91    172    163
D440V1, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLMN MUTATED        8      3      1
  CLMN WILD-TYPE    207    152    161
D440V2, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLMN MUTATED        5      5      1      2
  CLMN WILD-TYPE    130    119    124     58
D440V3, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            5            130
  CLUS_2            5            119
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLMN MUTATED        6      4      3
  CLMN WILD-TYPE    247     98     86
D440V4, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            6            247
  CLUS_2            4             98
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLMN MUTATED        4      8      4
  CLMN WILD-TYPE    160    239    139
D440V5, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            4            160
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLMN MUTATED        0      2      9      2      3
  CLMN WILD-TYPE    121    102     82    119    114
D440V6, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            9             82
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLMN MUTATED        3     12      2
  CLMN WILD-TYPE    156    239    163
D440V7, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            3            156
  CLUS_2           12            239
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLMN MUTATED        1      8      5      1      2
  CLMN WILD-TYPE    117    123    146     93     79
D440V8, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            123
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLMN MUTATED        2      4      0      3      3
  CLMN WILD-TYPE    116    132    115     37     68
D440V9, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            3             37
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLMN MUTATED        1      5      5      0      1
  CLMN WILD-TYPE     47    104    125    101     91
D440V10, multiclass
        clus
vv       CLMN MUTATED CLMN WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(441) Variable = CBLN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBLN3 MUTATED        0      1      1      5
  CBLN3 WILD-TYPE    135     91    171    171
D441V1, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLN3 MUTATED        5      0      0
  CBLN3 WILD-TYPE    210    155    162
D441V2, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CBLN3 MUTATED        3      1      0      2
  CBLN3 WILD-TYPE    132    123    125     58
D441V3, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLN3 MUTATED        6      0      0
  CBLN3 WILD-TYPE    247    102     89
D441V4, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLN3 MUTATED        1      6      0
  CBLN3 WILD-TYPE    163    241    143
D441V5, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLN3 MUTATED        1      2      4      0      0
  CBLN3 WILD-TYPE    120    102     87    121    117
D441V6, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CBLN3 MUTATED        1      6      0
  CBLN3 WILD-TYPE    158    245    165
D441V7, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLN3 MUTATED        1      4      2      0      0
  CBLN3 WILD-TYPE    117    127    149     94     81
D441V8, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLN3 MUTATED        0      4      0      0      1
  CBLN3 WILD-TYPE    118    132    115     40     70
D441V9, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CBLN3 MUTATED        0      3      2      0      0
  CBLN3 WILD-TYPE     48    106    128    101     92
D441V10, multiclass
        clus
vv       CBLN3 MUTATED CBLN3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(442) Variable = JHDM1D MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  JHDM1D MUTATED        2      0      1      8
  JHDM1D WILD-TYPE    133     92    171    168
D442V1, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JHDM1D MUTATED        7      1      0
  JHDM1D WILD-TYPE    208    154    162
D442V2, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              7              208
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  JHDM1D MUTATED        8      2      1      0
  JHDM1D WILD-TYPE    127    122    124     60
D442V3, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              8              127
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JHDM1D MUTATED        8      1      2
  JHDM1D WILD-TYPE    245    101     87
D442V4, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              8              245
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JHDM1D MUTATED        3      6      1
  JHDM1D WILD-TYPE    161    241    142
D442V5, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JHDM1D MUTATED        1      2      5      1      1
  JHDM1D WILD-TYPE    120    102     86    120    116
D442V6, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  JHDM1D MUTATED        3      8      0
  JHDM1D WILD-TYPE    156    243    165
D442V7, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              3              156
  CLUS_2              8              243
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JHDM1D MUTATED        2      6      2      1      0
  JHDM1D WILD-TYPE    116    125    149     93     81
D442V8, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              125
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JHDM1D MUTATED        2      3      0      1      2
  JHDM1D WILD-TYPE    116    133    115     39     69
D442V9, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  JHDM1D MUTATED        1      4      2      0      1
  JHDM1D WILD-TYPE     47    105    128    101     91
D442V10, multiclass
        clus
vv       JHDM1D MUTATED JHDM1D WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(443) Variable = FAM123C MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        0      0      3     14
  FAM123C WILD-TYPE    135     92    169    162
D443V1, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        9      3      3
  FAM123C WILD-TYPE    206    152    159
D443V2, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               9               206
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM123C MUTATED        8      5      1      1
  FAM123C WILD-TYPE    127    119    124     59
D443V3, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               8               127
  CLUS_2               5               119
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED       10      3      2
  FAM123C WILD-TYPE    243     99     87
D443V4, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1              10               243
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        2     10      4
  FAM123C WILD-TYPE    162    237    139
D443V5, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               2               162
  CLUS_2              10               237
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM123C MUTATED        0      4      7      2      3
  FAM123C WILD-TYPE    121    100     84    119    114
D443V6, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               0               121
  CLUS_2               4               100
  CLUS_3               7                84
  CLUS_4               2               119
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM123C MUTATED        3     12      2
  FAM123C WILD-TYPE    156    239    163
D443V7, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               3               156
  CLUS_2              12               239
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM123C MUTATED        2      7      5      2      1
  FAM123C WILD-TYPE    116    124    146     92     80
D443V8, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               2               116
  CLUS_2               7               124
  CLUS_3               5               146
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM123C MUTATED        2      5      1      1      5
  FAM123C WILD-TYPE    116    131    114     39     66
D443V9, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               131
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM123C MUTATED        0      6      5      1      2
  FAM123C WILD-TYPE     48    103    125    100     90
D443V10, multiclass
        clus
vv       FAM123C MUTATED FAM123C WILD-TYPE
  CLUS_1               0                48
  CLUS_2               6               103
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(444) Variable = GLIPR1L2 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLIPR1L2 MUTATED        1      1      4      8
  GLIPR1L2 WILD-TYPE    134     91    168    168
D444V1, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                4                168
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  GLIPR1L2 MUTATED        6      3      3
  GLIPR1L2 WILD-TYPE    209    152    159
D444V2, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                6                209
  CLUS_2                3                152
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLIPR1L2 MUTATED        7      5      0      2
  GLIPR1L2 WILD-TYPE    128    119    125     58
D444V3, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                5                119
  CLUS_3                0                125
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  GLIPR1L2 MUTATED       10      4      0
  GLIPR1L2 WILD-TYPE    243     98     89
D444V4, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1               10                243
  CLUS_2                4                 98
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  GLIPR1L2 MUTATED        2     10      3
  GLIPR1L2 WILD-TYPE    162    237    140
D444V5, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                2                162
  CLUS_2               10                237
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLIPR1L2 MUTATED        2      2      6      1      4
  GLIPR1L2 WILD-TYPE    119    102     85    120    113
D444V6, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                2                102
  CLUS_3                6                 85
  CLUS_4                1                120
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  GLIPR1L2 MUTATED        2     12      1
  GLIPR1L2 WILD-TYPE    157    239    164
D444V7, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                2                157
  CLUS_2               12                239
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLIPR1L2 MUTATED        3      5      5      1      1
  GLIPR1L2 WILD-TYPE    115    126    146     93     80
D444V8, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                5                126
  CLUS_3                5                146
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLIPR1L2 MUTATED        1      5      2      0      4
  GLIPR1L2 WILD-TYPE    117    131    113     40     67
D444V9, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                131
  CLUS_3                2                113
  CLUS_4                0                 40
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLIPR1L2 MUTATED        1      4      5      1      1
  GLIPR1L2 WILD-TYPE     47    105    125    100     91
D444V10, multiclass
        clus
vv       GLIPR1L2 MUTATED GLIPR1L2 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                4                105
  CLUS_3                5                125
  CLUS_4                1                100
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(445) Variable = TBC1D26 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBC1D26 MUTATED        2      0      3      3
  TBC1D26 WILD-TYPE    133     92    169    173
D445V1, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBC1D26 MUTATED        4      2      2
  TBC1D26 WILD-TYPE    211    153    160
D445V2, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBC1D26 MUTATED        2      2      1      0
  TBC1D26 WILD-TYPE    133    122    124     60
D445V3, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBC1D26 MUTATED        3      1      1
  TBC1D26 WILD-TYPE    250    101     88
D445V4, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBC1D26 MUTATED        3      4      1
  TBC1D26 WILD-TYPE    161    243    142
D445V5, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D26 MUTATED        0      0      4      3      1
  TBC1D26 WILD-TYPE    121    104     87    118    116
D445V6, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               4                87
  CLUS_4               3               118
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBC1D26 MUTATED        3      3      2
  TBC1D26 WILD-TYPE    156    248    163
D445V7, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               3               248
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D26 MUTATED        0      4      1      2      1
  TBC1D26 WILD-TYPE    118    127    150     92     80
D445V8, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               127
  CLUS_3               1               150
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D26 MUTATED        3      3      2      0      0
  TBC1D26 WILD-TYPE    115    133    113     40     71
D445V9, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               3               133
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D26 MUTATED        1      1      3      1      2
  TBC1D26 WILD-TYPE     47    108    127    100     90
D445V10, multiclass
        clus
vv       TBC1D26 MUTATED TBC1D26 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(446) Variable = BTNL3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL3 MUTATED        1      0      0      5
  BTNL3 WILD-TYPE    134     92    172    171
D446V1, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL3 MUTATED        2      1      2
  BTNL3 WILD-TYPE    213    154    160
D446V2, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTNL3 MUTATED        0      4      0      1
  BTNL3 WILD-TYPE    135    120    125     59
D446V3, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL3 MUTATED        2      3      0
  BTNL3 WILD-TYPE    251     99     89
D446V4, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL3 MUTATED        1      2      2
  BTNL3 WILD-TYPE    163    245    141
D446V5, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             2             245
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTNL3 MUTATED        1      1      2      0      1
  BTNL3 WILD-TYPE    120    103     89    121    116
D446V6, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTNL3 MUTATED        0      4      2
  BTNL3 WILD-TYPE    159    247    163
D446V7, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTNL3 MUTATED        1      0      5      0      0
  BTNL3 WILD-TYPE    117    131    146     94     81
D446V8, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             0             131
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTNL3 MUTATED        0      0      0      0      4
  BTNL3 WILD-TYPE    118    136    115     40     67
D446V9, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             136
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTNL3 MUTATED        0      0      3      1      0
  BTNL3 WILD-TYPE     48    109    127    100     92
D446V10, multiclass
        clus
vv       BTNL3 MUTATED BTNL3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             0             109
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(447) Variable = MYO9B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO9B MUTATED        4      1      5     17
  MYO9B WILD-TYPE    131     91    167    159
D447V1, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             5             167
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO9B MUTATED       14      6      5
  MYO9B WILD-TYPE    201    149    157
D447V2, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1            14             201
  CLUS_2             6             149
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO9B MUTATED        8     10      1      4
  MYO9B WILD-TYPE    127    114    124     56
D447V3, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             8             127
  CLUS_2            10             114
  CLUS_3             1             124
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO9B MUTATED       12      8      3
  MYO9B WILD-TYPE    241     94     86
D447V4, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1            12             241
  CLUS_2             8              94
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO9B MUTATED        6     15      5
  MYO9B WILD-TYPE    158    232    138
D447V5, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             6             158
  CLUS_2            15             232
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO9B MUTATED        3      5      8      6      4
  MYO9B WILD-TYPE    118     99     83    115    113
D447V6, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             8              83
  CLUS_4             6             115
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO9B MUTATED        6     19      3
  MYO9B WILD-TYPE    153    232    162
D447V7, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             6             153
  CLUS_2            19             232
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO9B MUTATED        3     10     10      4      1
  MYO9B WILD-TYPE    115    121    141     90     80
D447V8, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             3             115
  CLUS_2            10             121
  CLUS_3            10             141
  CLUS_4             4              90
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO9B MUTATED        6      6      2      1      6
  MYO9B WILD-TYPE    112    130    113     39     65
D447V9, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             6             112
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO9B MUTATED        2      6      8      1      4
  MYO9B WILD-TYPE     46    103    122    100     88
D447V10, multiclass
        clus
vv       MYO9B MUTATED MYO9B WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             8             122
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(448) Variable = KDM3B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDM3B MUTATED        4      6      2     16
  KDM3B WILD-TYPE    131     86    170    160
D448V1, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6              86
  CLUS_3             2             170
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KDM3B MUTATED       12      5      7
  KDM3B WILD-TYPE    203    150    155
D448V2, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1            12             203
  CLUS_2             5             150
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDM3B MUTATED       12      6      3      4
  KDM3B WILD-TYPE    123    118    122     56
D448V3, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1            12             123
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KDM3B MUTATED       20      3      2
  KDM3B WILD-TYPE    233     99     87
D448V4, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1            20             233
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KDM3B MUTATED        7     14      5
  KDM3B WILD-TYPE    157    233    138
D448V5, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             7             157
  CLUS_2            14             233
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDM3B MUTATED        3      6      7      4      6
  KDM3B WILD-TYPE    118     98     84    117    111
D448V6, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             3             118
  CLUS_2             6              98
  CLUS_3             7              84
  CLUS_4             4             117
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KDM3B MUTATED        7     14      7
  KDM3B WILD-TYPE    152    237    158
D448V7, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             7             152
  CLUS_2            14             237
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDM3B MUTATED        5      7      9      4      3
  KDM3B WILD-TYPE    113    124    142     90     78
D448V8, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             5             113
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDM3B MUTATED        3      6      3      5      4
  KDM3B WILD-TYPE    115    130    112     35     67
D448V9, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             5              35
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDM3B MUTATED        2      6      5      5      3
  KDM3B WILD-TYPE     46    103    125     96     89
D448V10, multiclass
        clus
vv       KDM3B MUTATED KDM3B WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             5              96
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(449) Variable = USP35 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP35 MUTATED        3      2      2      5
  USP35 WILD-TYPE    132     90    170    171
D449V1, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP35 MUTATED       10      1      1
  USP35 WILD-TYPE    205    154    161
D449V2, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP35 MUTATED        6      4      1      0
  USP35 WILD-TYPE    129    120    124     60
D449V3, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP35 MUTATED        9      2      0
  USP35 WILD-TYPE    244    100     89
D449V4, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP35 MUTATED        3      7      2
  USP35 WILD-TYPE    161    240    141
D449V5, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP35 MUTATED        2      2      5      2      1
  USP35 WILD-TYPE    119    102     86    119    116
D449V6, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP35 MUTATED        3      8      1
  USP35 WILD-TYPE    156    243    164
D449V7, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP35 MUTATED        2      4      3      2      1
  USP35 WILD-TYPE    116    127    148     92     80
D449V8, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP35 MUTATED        4      2      1      1      3
  USP35 WILD-TYPE    114    134    114     39     68
D449V9, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP35 MUTATED        1      3      4      1      2
  USP35 WILD-TYPE     47    106    126    100     90
D449V10, multiclass
        clus
vv       USP35 MUTATED USP35 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(450) Variable = ARAF MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARAF MUTATED        2      0      3     10
  ARAF WILD-TYPE    133     92    169    166
D450V1, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARAF MUTATED        9      1      3
  ARAF WILD-TYPE    206    154    159
D450V2, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            9            206
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARAF MUTATED        4      4      2      2
  ARAF WILD-TYPE    131    120    123     58
D450V3, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            4            131
  CLUS_2            4            120
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARAF MUTATED        7      2      3
  ARAF WILD-TYPE    246    100     86
D450V4, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            7            246
  CLUS_2            2            100
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARAF MUTATED        3      8      3
  ARAF WILD-TYPE    161    239    140
D450V5, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            3            161
  CLUS_2            8            239
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARAF MUTATED        3      3      5      1      2
  ARAF WILD-TYPE    118    101     86    120    115
D450V6, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARAF MUTATED        2      9      4
  ARAF WILD-TYPE    157    242    161
D450V7, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARAF MUTATED        3      5      6      1      0
  ARAF WILD-TYPE    115    126    145     93     81
D450V8, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            126
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARAF MUTATED        1      2      3      2      4
  ARAF WILD-TYPE    117    134    112     38     67
D450V9, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARAF MUTATED        1      3      6      1      1
  ARAF WILD-TYPE     47    106    124    100     91
D450V10, multiclass
        clus
vv       ARAF MUTATED ARAF WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(451) Variable = YLPM1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YLPM1 MUTATED        1      2      2     26
  YLPM1 WILD-TYPE    134     90    170    150
D451V1, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            26             150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YLPM1 MUTATED       14      5      7
  YLPM1 WILD-TYPE    201    150    155
D451V2, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             5             150
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YLPM1 MUTATED        9     14      2      1
  YLPM1 WILD-TYPE    126    110    123     59
D451V3, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             9             126
  CLUS_2            14             110
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YLPM1 MUTATED       16      8      2
  YLPM1 WILD-TYPE    237     94     87
D451V4, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1            16             237
  CLUS_2             8              94
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YLPM1 MUTATED        7     13      8
  YLPM1 WILD-TYPE    157    234    135
D451V5, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            13             234
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YLPM1 MUTATED        3      5     12      3      5
  YLPM1 WILD-TYPE    118     99     79    118    112
D451V6, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3            12              79
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YLPM1 MUTATED        5     21      5
  YLPM1 WILD-TYPE    154    230    160
D451V7, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            21             230
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YLPM1 MUTATED        2     11     12      3      3
  YLPM1 WILD-TYPE    116    120    139     91     78
D451V8, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            11             120
  CLUS_3            12             139
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YLPM1 MUTATED        4      7      1      1     11
  YLPM1 WILD-TYPE    114    129    114     39     60
D451V9, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             129
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YLPM1 MUTATED        2      9     10      0      3
  YLPM1 WILD-TYPE     46    100    120    101     89
D451V10, multiclass
        clus
vv       YLPM1 MUTATED YLPM1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             9             100
  CLUS_3            10             120
  CLUS_4             0             101
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(452) Variable = TXLNG MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TXLNG MUTATED        4      0      0      5
  TXLNG WILD-TYPE    131     92    172    171
D452V1, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TXLNG MUTATED        8      0      0
  TXLNG WILD-TYPE    207    155    162
D452V2, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TXLNG MUTATED        5      2      0      0
  TXLNG WILD-TYPE    130    122    125     60
D452V3, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             5             130
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TXLNG MUTATED        5      1      1
  TXLNG WILD-TYPE    248    101     88
D452V4, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TXLNG MUTATED        0      6      3
  TXLNG WILD-TYPE    164    241    140
D452V5, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             0             164
  CLUS_2             6             241
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TXLNG MUTATED        0      2      6      0      1
  TXLNG WILD-TYPE    121    102     85    121    116
D452V6, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TXLNG MUTATED        1      8      0
  TXLNG WILD-TYPE    158    243    165
D452V7, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TXLNG MUTATED        1      5      3      0      0
  TXLNG WILD-TYPE    117    126    148     94     81
D452V8, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TXLNG MUTATED        0      4      0      1      2
  TXLNG WILD-TYPE    118    132    115     39     69
D452V9, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TXLNG MUTATED        0      4      3      0      0
  TXLNG WILD-TYPE     48    105    127    101     92
D452V10, multiclass
        clus
vv       TXLNG MUTATED TXLNG WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(453) Variable = PIK3R3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R3 MUTATED        3      1      1      5
  PIK3R3 WILD-TYPE    132     91    171    171
D453V1, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R3 MUTATED        5      0      3
  PIK3R3 WILD-TYPE    210    155    159
D453V2, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R3 MUTATED        2      2      3      1
  PIK3R3 WILD-TYPE    133    122    122     59
D453V3, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R3 MUTATED        4      2      2
  PIK3R3 WILD-TYPE    249    100     87
D453V4, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R3 MUTATED        4      5      1
  PIK3R3 WILD-TYPE    160    242    142
D453V5, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              5              242
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R3 MUTATED        1      1      3      3      2
  PIK3R3 WILD-TYPE    120    103     88    118    115
D453V6, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R3 MUTATED        1      5      4
  PIK3R3 WILD-TYPE    158    246    161
D453V7, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R3 MUTATED        0      4      5      0      1
  PIK3R3 WILD-TYPE    118    127    146     94     80
D453V8, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R3 MUTATED        0      1      2      3      1
  PIK3R3 WILD-TYPE    118    135    113     37     70
D453V9, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              3               37
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R3 MUTATED        1      2      3      1      0
  PIK3R3 WILD-TYPE     47    107    127    100     92
D453V10, multiclass
        clus
vv       PIK3R3 MUTATED PIK3R3 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(454) Variable = UBR3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        0      3      1      9
  UBR3 WILD-TYPE    135     89    171    167
D454V1, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3             89
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        7      4      2
  UBR3 WILD-TYPE    208    151    160
D454V2, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            4            151
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBR3 MUTATED        7      2      0      1
  UBR3 WILD-TYPE    128    122    125     59
D454V3, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        8      2      0
  UBR3 WILD-TYPE    245    100     89
D454V4, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        4      8      2
  UBR3 WILD-TYPE    160    239    141
D454V5, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            4            160
  CLUS_2            8            239
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBR3 MUTATED        1      4      3      4      2
  UBR3 WILD-TYPE    120    100     88    117    115
D454V6, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            4            100
  CLUS_3            3             88
  CLUS_4            4            117
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UBR3 MUTATED        3      7      4
  UBR3 WILD-TYPE    156    244    161
D454V7, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            7            244
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBR3 MUTATED        2      2      6      4      0
  UBR3 WILD-TYPE    116    129    145     90     81
D454V8, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            129
  CLUS_3            6            145
  CLUS_4            4             90
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBR3 MUTATED        4      2      3      0      3
  UBR3 WILD-TYPE    114    134    112     40     68
D454V9, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            2            134
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBR3 MUTATED        1      1      5      1      4
  UBR3 WILD-TYPE     47    108    125    100     88
D454V10, multiclass
        clus
vv       UBR3 MUTATED UBR3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            5            125
  CLUS_4            1            100
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(455) Variable = RELT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RELT MUTATED        0      0      1      7
  RELT WILD-TYPE    135     92    171    169
D455V1, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELT MUTATED        7      1      0
  RELT WILD-TYPE    208    154    162
D455V2, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RELT MUTATED        4      1      1      0
  RELT WILD-TYPE    131    123    124     60
D455V3, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1            123
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELT MUTATED        5      0      1
  RELT WILD-TYPE    248    102     88
D455V4, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            5            248
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELT MUTATED        1      4      3
  RELT WILD-TYPE    163    243    140
D455V5, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            1            163
  CLUS_2            4            243
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELT MUTATED        0      0      5      1      2
  RELT WILD-TYPE    121    104     86    120    115
D455V6, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELT MUTATED        1      5      2
  RELT WILD-TYPE    158    246    163
D455V7, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELT MUTATED        0      4      1      1      2
  RELT WILD-TYPE    118    127    150     93     79
D455V8, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            1            150
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELT MUTATED        0      3      2      1      1
  RELT WILD-TYPE    118    133    113     39     70
D455V9, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELT MUTATED        0      3      2      1      1
  RELT WILD-TYPE     48    106    128    100     91
D455V10, multiclass
        clus
vv       RELT MUTATED RELT WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(456) Variable = TUBE1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TUBE1 MUTATED        0      3      0      7
  TUBE1 WILD-TYPE    135     89    172    169
D456V1, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3              89
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TUBE1 MUTATED        5      0      3
  TUBE1 WILD-TYPE    210    155    159
D456V2, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TUBE1 MUTATED        2      6      1      1
  TUBE1 WILD-TYPE    133    118    124     59
D456V3, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TUBE1 MUTATED        5      4      1
  TUBE1 WILD-TYPE    248     98     88
D456V4, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TUBE1 MUTATED        2      4      3
  TUBE1 WILD-TYPE    162    243    140
D456V5, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBE1 MUTATED        2      1      5      0      1
  TUBE1 WILD-TYPE    119    103     86    121    116
D456V6, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TUBE1 MUTATED        0      6      4
  TUBE1 WILD-TYPE    159    245    161
D456V7, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBE1 MUTATED        1      3      6      0      0
  TUBE1 WILD-TYPE    117    128    145     94     81
D456V8, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBE1 MUTATED        0      4      3      1      0
  TUBE1 WILD-TYPE    118    132    112     39     71
D456V9, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBE1 MUTATED        2      2      4      0      0
  TUBE1 WILD-TYPE     46    107    126    101     92
D456V10, multiclass
        clus
vv       TUBE1 MUTATED TUBE1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(457) Variable = TRIP11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIP11 MUTATED        2      0      7      9
  TRIP11 WILD-TYPE    133     92    165    167
D457V1, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              7              165
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP11 MUTATED        9      5      3
  TRIP11 WILD-TYPE    206    150    159
D457V2, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              5              150
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIP11 MUTATED       10      5      0      2
  TRIP11 WILD-TYPE    125    119    125     58
D457V3, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1             10              125
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP11 MUTATED       14      3      0
  TRIP11 WILD-TYPE    239     99     89
D457V4, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1             14              239
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP11 MUTATED        5      7      4
  TRIP11 WILD-TYPE    159    240    139
D457V5, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              7              240
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP11 MUTATED        3      0      6      5      2
  TRIP11 WILD-TYPE    118    104     85    116    115
D457V6, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              0              104
  CLUS_3              6               85
  CLUS_4              5              116
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP11 MUTATED        4     10      4
  TRIP11 WILD-TYPE    155    241    161
D457V7, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             10              241
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP11 MUTATED        2      6      4      4      2
  TRIP11 WILD-TYPE    116    125    147     90     79
D457V8, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP11 MUTATED        3      5      2      1      5
  TRIP11 WILD-TYPE    115    131    113     39     66
D457V9, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              131
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP11 MUTATED        1      3      6      2      4
  TRIP11 WILD-TYPE     47    106    124     99     88
D457V10, multiclass
        clus
vv       TRIP11 MUTATED TRIP11 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              6              124
  CLUS_4              2               99
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(458) Variable = ADCY10 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADCY10 MUTATED        3      4      8     12
  ADCY10 WILD-TYPE    132     88    164    164
D458V1, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4               88
  CLUS_3              8              164
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADCY10 MUTATED       14      4      5
  ADCY10 WILD-TYPE    201    151    157
D458V2, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              4              151
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ADCY10 MUTATED        7      8      5      2
  ADCY10 WILD-TYPE    128    116    120     58
D458V3, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              8              116
  CLUS_3              5              120
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADCY10 MUTATED       16      4      2
  ADCY10 WILD-TYPE    237     98     87
D458V4, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1             16              237
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADCY10 MUTATED        3     18      5
  ADCY10 WILD-TYPE    161    229    138
D458V5, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             18              229
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADCY10 MUTATED        3      9      6      4      4
  ADCY10 WILD-TYPE    118     95     85    117    113
D458V6, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              9               95
  CLUS_3              6               85
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ADCY10 MUTATED        7     14      6
  ADCY10 WILD-TYPE    152    237    159
D458V7, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              7              152
  CLUS_2             14              237
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADCY10 MUTATED        6      9      6      3      3
  ADCY10 WILD-TYPE    112    122    145     91     78
D458V8, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              6              112
  CLUS_2              9              122
  CLUS_3              6              145
  CLUS_4              3               91
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADCY10 MUTATED        5      8      6      0      3
  ADCY10 WILD-TYPE    113    128    109     40     68
D458V9, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              8              128
  CLUS_3              6              109
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ADCY10 MUTATED        1      7      6      5      3
  ADCY10 WILD-TYPE     47    102    124     96     89
D458V10, multiclass
        clus
vv       ADCY10 MUTATED ADCY10 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              7              102
  CLUS_3              6              124
  CLUS_4              5               96
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(459) Variable = INTS12 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INTS12 MUTATED        0      0      1      5
  INTS12 WILD-TYPE    135     92    171    171
D459V1, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INTS12 MUTATED        3      0      1
  INTS12 WILD-TYPE    212    155    161
D459V2, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INTS12 MUTATED        1      3      2      0
  INTS12 WILD-TYPE    134    121    123     60
D459V3, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INTS12 MUTATED        4      0      2
  INTS12 WILD-TYPE    249    102     87
D459V4, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              0              102
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INTS12 MUTATED        0      3      2
  INTS12 WILD-TYPE    164    244    141
D459V5, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS12 MUTATED        0      1      2      0      2
  INTS12 WILD-TYPE    121    103     89    121    115
D459V6, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INTS12 MUTATED        0      4      2
  INTS12 WILD-TYPE    159    247    163
D459V7, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              4              247
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS12 MUTATED        1      2      3      0      0
  INTS12 WILD-TYPE    117    129    148     94     81
D459V8, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS12 MUTATED        0      1      0      1      2
  INTS12 WILD-TYPE    118    135    115     39     69
D459V9, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS12 MUTATED        0      2      1      1      0
  INTS12 WILD-TYPE     48    107    129    100     92
D459V10, multiclass
        clus
vv       INTS12 MUTATED INTS12 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(460) Variable = TNFRSF9 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        0      0      2      9
  TNFRSF9 WILD-TYPE    135     92    170    167
D460V1, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        7      1      2
  TNFRSF9 WILD-TYPE    208    154    160
D460V2, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF9 MUTATED        1      4      2      1
  TNFRSF9 WILD-TYPE    134    120    123     59
D460V3, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               4               120
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        3      3      2
  TNFRSF9 WILD-TYPE    250     99     87
D460V4, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        2      6      2
  TNFRSF9 WILD-TYPE    162    241    141
D460V5, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               6               241
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF9 MUTATED        0      1      6      1      2
  TNFRSF9 WILD-TYPE    121    103     85    120    115
D460V6, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFRSF9 MUTATED        2      5      4
  TNFRSF9 WILD-TYPE    157    246    161
D460V7, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               5               246
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF9 MUTATED        0      3      5      1      2
  TNFRSF9 WILD-TYPE    118    128    146     93     79
D460V8, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF9 MUTATED        1      1      3      1      3
  TNFRSF9 WILD-TYPE    117    135    112     39     68
D460V9, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF9 MUTATED        1      0      6      1      1
  TNFRSF9 WILD-TYPE     47    109    124    100     91
D460V10, multiclass
        clus
vv       TNFRSF9 MUTATED TNFRSF9 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               0               109
  CLUS_3               6               124
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(461) Variable = DYX1C1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYX1C1 MUTATED        1      2      1      9
  DYX1C1 WILD-TYPE    134     90    171    167
D461V1, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYX1C1 MUTATED        8      2      1
  DYX1C1 WILD-TYPE    207    153    161
D461V2, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYX1C1 MUTATED        5      3      2      0
  DYX1C1 WILD-TYPE    130    121    123     60
D461V3, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYX1C1 MUTATED        8      1      1
  DYX1C1 WILD-TYPE    245    101     88
D461V4, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYX1C1 MUTATED        3      6      3
  DYX1C1 WILD-TYPE    161    241    140
D461V5, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYX1C1 MUTATED        1      4      3      0      4
  DYX1C1 WILD-TYPE    120    100     88    121    113
D461V6, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYX1C1 MUTATED        2      8      3
  DYX1C1 WILD-TYPE    157    243    162
D461V7, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYX1C1 MUTATED        1      4      6      0      2
  DYX1C1 WILD-TYPE    117    127    145     94     79
D461V8, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              127
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYX1C1 MUTATED        2      1      2      2      3
  DYX1C1 WILD-TYPE    116    135    113     38     68
D461V9, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYX1C1 MUTATED        1      2      5      2      0
  DYX1C1 WILD-TYPE     47    107    125     99     92
D461V10, multiclass
        clus
vv       DYX1C1 MUTATED DYX1C1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(462) Variable = KIAA1522 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1522 MUTATED        1      2      1      9
  KIAA1522 WILD-TYPE    134     90    171    167
D462V1, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                 90
  CLUS_3                1                171
  CLUS_4                9                167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1522 MUTATED        9      0      3
  KIAA1522 WILD-TYPE    206    155    159
D462V2, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                0                155
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1522 MUTATED        1      7      0      2
  KIAA1522 WILD-TYPE    134    117    125     58
D462V3, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                7                117
  CLUS_3                0                125
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1522 MUTATED        7      3      0
  KIAA1522 WILD-TYPE    246     99     89
D462V4, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                7                246
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1522 MUTATED        3      6      3
  KIAA1522 WILD-TYPE    161    241    140
D462V5, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                6                241
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1522 MUTATED        2      1      6      1      2
  KIAA1522 WILD-TYPE    119    103     85    120    115
D462V6, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                1                103
  CLUS_3                6                 85
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1522 MUTATED        3      6      4
  KIAA1522 WILD-TYPE    156    245    161
D462V7, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                6                245
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1522 MUTATED        2      5      4      1      1
  KIAA1522 WILD-TYPE    116    126    147     93     80
D462V8, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                126
  CLUS_3                4                147
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1522 MUTATED        1      3      2      1      5
  KIAA1522 WILD-TYPE    117    133    113     39     66
D462V9, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                133
  CLUS_3                2                113
  CLUS_4                1                 39
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1522 MUTATED        0      5      4      2      1
  KIAA1522 WILD-TYPE     48    104    126     99     91
D462V10, multiclass
        clus
vv       KIAA1522 MUTATED KIAA1522 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                4                126
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(463) Variable = WDR5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR5 MUTATED        0      1      1      4
  WDR5 WILD-TYPE    135     91    171    172
D463V1, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR5 MUTATED        1      2      0
  WDR5 WILD-TYPE    214    153    162
D463V2, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            1            214
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR5 MUTATED        2      1      2      0
  WDR5 WILD-TYPE    133    123    123     60
D463V3, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1            123
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR5 MUTATED        2      1      2
  WDR5 WILD-TYPE    251    101     87
D463V4, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            2            251
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR5 MUTATED        1      2      3
  WDR5 WILD-TYPE    163    245    140
D463V5, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR5 MUTATED        3      0      1      0      2
  WDR5 WILD-TYPE    118    104     90    121    115
D463V6, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            0            104
  CLUS_3            1             90
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WDR5 MUTATED        1      3      2
  WDR5 WILD-TYPE    158    248    163
D463V7, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR5 MUTATED        2      0      3      0      1
  WDR5 WILD-TYPE    116    131    148     94     80
D463V8, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            0            131
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR5 MUTATED        1      1      0      0      1
  WDR5 WILD-TYPE    117    135    115     40     70
D463V9, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR5 MUTATED        0      2      1      0      0
  WDR5 WILD-TYPE     48    107    129    101     92
D463V10, multiclass
        clus
vv       WDR5 MUTATED WDR5 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(464) Variable = GCDH MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GCDH MUTATED        0      1      1      6
  GCDH WILD-TYPE    135     91    171    170
D464V1, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCDH MUTATED        4      1      2
  GCDH WILD-TYPE    211    154    160
D464V2, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GCDH MUTATED        4      3      1      0
  GCDH WILD-TYPE    131    121    124     60
D464V3, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCDH MUTATED        5      2      1
  GCDH WILD-TYPE    248    100     88
D464V4, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCDH MUTATED        3      4      1
  GCDH WILD-TYPE    161    243    142
D464V5, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            3            161
  CLUS_2            4            243
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCDH MUTATED        1      1      3      1      2
  GCDH WILD-TYPE    120    103     88    120    115
D464V6, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GCDH MUTATED        1      5      2
  GCDH WILD-TYPE    158    246    163
D464V7, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCDH MUTATED        0      3      3      1      1
  GCDH WILD-TYPE    118    128    148     93     80
D464V8, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCDH MUTATED        1      2      1      0      2
  GCDH WILD-TYPE    117    134    114     40     69
D464V9, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCDH MUTATED        0      2      3      0      1
  GCDH WILD-TYPE     48    107    127    101     91
D464V10, multiclass
        clus
vv       GCDH MUTATED GCDH WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(465) Variable = CREBBP MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBBP MUTATED        4      2     11     30
  CREBBP WILD-TYPE    131     90    161    146
D465V1, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3             11              161
  CLUS_4             30              146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBBP MUTATED       29      9      5
  CREBBP WILD-TYPE    186    146    157
D465V2, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1             29              186
  CLUS_2              9              146
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CREBBP MUTATED       16     15      6      2
  CREBBP WILD-TYPE    119    109    119     58
D465V3, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1             16              119
  CLUS_2             15              109
  CLUS_3              6              119
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBBP MUTATED       25      9      5
  CREBBP WILD-TYPE    228     93     84
D465V4, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1             25              228
  CLUS_2              9               93
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBBP MUTATED        9     27     11
  CREBBP WILD-TYPE    155    220    132
D465V5, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              9              155
  CLUS_2             27              220
  CLUS_3             11              132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CREBBP MUTATED        5     10     19      6      7
  CREBBP WILD-TYPE    116     94     72    115    110
D465V6, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              5              116
  CLUS_2             10               94
  CLUS_3             19               72
  CLUS_4              6              115
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CREBBP MUTATED        8     33      7
  CREBBP WILD-TYPE    151    218    158
D465V7, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              8              151
  CLUS_2             33              218
  CLUS_3              7              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CREBBP MUTATED        5     16     18      6      3
  CREBBP WILD-TYPE    113    115    133     88     78
D465V8, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              5              113
  CLUS_2             16              115
  CLUS_3             18              133
  CLUS_4              6               88
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CREBBP MUTATED        5     12      5      3     10
  CREBBP WILD-TYPE    113    124    110     37     61
D465V9, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              5              113
  CLUS_2             12              124
  CLUS_3              5              110
  CLUS_4              3               37
  CLUS_5             10               61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CREBBP MUTATED        4     13     11      1      6
  CREBBP WILD-TYPE     44     96    119    100     86
D465V10, multiclass
        clus
vv       CREBBP MUTATED CREBBP WILD-TYPE
  CLUS_1              4               44
  CLUS_2             13               96
  CLUS_3             11              119
  CLUS_4              1              100
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(466) Variable = IDH2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        1      0      2      5
  IDH2 WILD-TYPE    134     92    170    171
D466V1, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        4      2      2
  IDH2 WILD-TYPE    211    153    160
D466V2, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDH2 MUTATED        0      3      2      0
  IDH2 WILD-TYPE    135    121    123     60
D466V3, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        1      3      1
  IDH2 WILD-TYPE    252     99     88
D466V4, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        4      4      0
  IDH2 WILD-TYPE    160    243    143
D466V5, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            4            160
  CLUS_2            4            243
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDH2 MUTATED        1      2      1      2      2
  IDH2 WILD-TYPE    120    102     90    119    115
D466V6, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            1             90
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IDH2 MUTATED        3      3      2
  IDH2 WILD-TYPE    156    248    163
D466V7, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDH2 MUTATED        0      4      1      3      0
  IDH2 WILD-TYPE    118    127    150     91     81
D466V8, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            1            150
  CLUS_4            3             91
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDH2 MUTATED        2      2      0      2      1
  IDH2 WILD-TYPE    116    134    115     38     70
D466V9, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDH2 MUTATED        0      2      2      0      3
  IDH2 WILD-TYPE     48    107    128    101     89
D466V10, multiclass
        clus
vv       IDH2 MUTATED IDH2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(467) Variable = POP1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POP1 MUTATED        4      2      5     10
  POP1 WILD-TYPE    131     90    167    166
D467V1, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2             90
  CLUS_3            5            167
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POP1 MUTATED        9      3      5
  POP1 WILD-TYPE    206    152    157
D467V2, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POP1 MUTATED        6      8      2      3
  POP1 WILD-TYPE    129    116    123     57
D467V3, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            8            116
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POP1 MUTATED       12      5      2
  POP1 WILD-TYPE    241     97     87
D467V4, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1           12            241
  CLUS_2            5             97
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POP1 MUTATED        7      8      7
  POP1 WILD-TYPE    157    239    136
D467V5, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            7            157
  CLUS_2            8            239
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POP1 MUTATED        3      1     11      3      4
  POP1 WILD-TYPE    118    103     80    118    113
D467V6, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            1            103
  CLUS_3           11             80
  CLUS_4            3            118
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  POP1 MUTATED        3     14      5
  POP1 WILD-TYPE    156    237    160
D467V7, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           14            237
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POP1 MUTATED        4      8      8      2      0
  POP1 WILD-TYPE    114    123    143     92     81
D467V8, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            8            123
  CLUS_3            8            143
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POP1 MUTATED        1      6      2      4      3
  POP1 WILD-TYPE    117    130    113     36     68
D467V9, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            130
  CLUS_3            2            113
  CLUS_4            4             36
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POP1 MUTATED        1      6      5      2      2
  POP1 WILD-TYPE     47    103    125     99     90
D467V10, multiclass
        clus
vv       POP1 MUTATED POP1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3            5            125
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(468) Variable = NTAN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NTAN1 MUTATED        0      0      1      6
  NTAN1 WILD-TYPE    135     92    171    170
D468V1, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NTAN1 MUTATED        4      1      1
  NTAN1 WILD-TYPE    211    154    161
D468V2, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NTAN1 MUTATED        3      2      0      1
  NTAN1 WILD-TYPE    132    122    125     59
D468V3, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NTAN1 MUTATED        5      1      0
  NTAN1 WILD-TYPE    248    101     89
D468V4, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NTAN1 MUTATED        1      4      2
  NTAN1 WILD-TYPE    163    243    141
D468V5, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NTAN1 MUTATED        0      1      3      1      2
  NTAN1 WILD-TYPE    121    103     88    120    115
D468V6, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NTAN1 MUTATED        1      5      1
  NTAN1 WILD-TYPE    158    246    164
D468V7, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NTAN1 MUTATED        0      3      3      1      0
  NTAN1 WILD-TYPE    118    128    148     93     81
D468V8, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NTAN1 MUTATED        1      2      0      0      2
  NTAN1 WILD-TYPE    117    134    115     40     69
D468V9, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NTAN1 MUTATED        0      1      3      0      1
  NTAN1 WILD-TYPE     48    108    127    101     91
D468V10, multiclass
        clus
vv       NTAN1 MUTATED NTAN1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(469) Variable = ZNF776 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF776 MUTATED        0      0      1      9
  ZNF776 WILD-TYPE    135     92    171    167
D469V1, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF776 MUTATED        4      1      3
  ZNF776 WILD-TYPE    211    154    159
D469V2, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF776 MUTATED        4      3      2      0
  ZNF776 WILD-TYPE    131    121    123     60
D469V3, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF776 MUTATED        5      2      2
  ZNF776 WILD-TYPE    248    100     87
D469V4, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF776 MUTATED        4      2      3
  ZNF776 WILD-TYPE    160    245    140
D469V5, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              2              245
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF776 MUTATED        2      1      2      1      3
  ZNF776 WILD-TYPE    119    103     89    120    114
D469V6, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF776 MUTATED        2      4      4
  ZNF776 WILD-TYPE    157    247    161
D469V7, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              4              247
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF776 MUTATED        0      2      4      1      3
  ZNF776 WILD-TYPE    118    129    147     93     78
D469V8, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF776 MUTATED        2      1      1      1      3
  ZNF776 WILD-TYPE    116    135    114     39     68
D469V9, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF776 MUTATED        0      1      5      1      1
  ZNF776 WILD-TYPE     48    108    125    100     91
D469V10, multiclass
        clus
vv       ZNF776 MUTATED ZNF776 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(470) Variable = USP15 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP15 MUTATED        1      1      0      7
  USP15 WILD-TYPE    134     91    172    169
D470V1, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP15 MUTATED        5      0      3
  USP15 WILD-TYPE    210    155    159
D470V2, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP15 MUTATED        2      5      1      1
  USP15 WILD-TYPE    133    119    124     59
D470V3, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP15 MUTATED        6      3      0
  USP15 WILD-TYPE    247     99     89
D470V4, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP15 MUTATED        2      4      3
  USP15 WILD-TYPE    162    243    140
D470V5, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP15 MUTATED        0      1      5      0      3
  USP15 WILD-TYPE    121    103     86    121    114
D470V6, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP15 MUTATED        0      7      2
  USP15 WILD-TYPE    159    244    163
D470V7, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP15 MUTATED        1      4      4      0      0
  USP15 WILD-TYPE    117    127    147     94     81
D470V8, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP15 MUTATED        0      3      0      0      3
  USP15 WILD-TYPE    118    133    115     40     68
D470V9, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP15 MUTATED        0      3      3      0      0
  USP15 WILD-TYPE     48    106    127    101     92
D470V10, multiclass
        clus
vv       USP15 MUTATED USP15 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(471) Variable = IGFBP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFBP1 MUTATED        2      0      1      8
  IGFBP1 WILD-TYPE    133     92    171    168
D471V1, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGFBP1 MUTATED        8      1      2
  IGFBP1 WILD-TYPE    207    154    160
D471V2, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGFBP1 MUTATED        2      7      0      1
  IGFBP1 WILD-TYPE    133    117    125     59
D471V3, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              7              117
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGFBP1 MUTATED        6      3      1
  IGFBP1 WILD-TYPE    247     99     88
D471V4, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGFBP1 MUTATED        2      6      3
  IGFBP1 WILD-TYPE    162    241    140
D471V5, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGFBP1 MUTATED        1      2      5      0      3
  IGFBP1 WILD-TYPE    120    102     86    121    114
D471V6, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGFBP1 MUTATED        0     10      1
  IGFBP1 WILD-TYPE    159    241    164
D471V7, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2             10              241
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGFBP1 MUTATED        1      6      4      0      0
  IGFBP1 WILD-TYPE    117    125    147     94     81
D471V8, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGFBP1 MUTATED        0      4      0      3      4
  IGFBP1 WILD-TYPE    118    132    115     37     67
D471V9, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              3               37
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGFBP1 MUTATED        1      3      7      0      0
  IGFBP1 WILD-TYPE     47    106    123    101     92
D471V10, multiclass
        clus
vv       IGFBP1 MUTATED IGFBP1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              7              123
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(472) Variable = GON4L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GON4L MUTATED        1      0      4     15
  GON4L WILD-TYPE    134     92    168    161
D472V1, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GON4L MUTATED       13      4      2
  GON4L WILD-TYPE    202    151    160
D472V2, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1            13             202
  CLUS_2             4             151
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GON4L MUTATED        8      5      2      0
  GON4L WILD-TYPE    127    119    123     60
D472V3, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             8             127
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GON4L MUTATED        9      4      2
  GON4L WILD-TYPE    244     98     87
D472V4, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             9             244
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GON4L MUTATED        6      8      5
  GON4L WILD-TYPE    158    239    138
D472V5, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             6             158
  CLUS_2             8             239
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GON4L MUTATED        1      1      8      5      4
  GON4L WILD-TYPE    120    103     83    116    113
D472V6, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             8              83
  CLUS_4             5             116
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GON4L MUTATED        7     11      2
  GON4L WILD-TYPE    152    240    163
D472V7, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             7             152
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GON4L MUTATED        0      8      6      4      2
  GON4L WILD-TYPE    118    123    145     90     79
D472V8, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             123
  CLUS_3             6             145
  CLUS_4             4              90
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GON4L MUTATED        5      3      2      1      6
  GON4L WILD-TYPE    113    133    113     39     65
D472V9, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             5             113
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GON4L MUTATED        1      4      7      1      4
  GON4L WILD-TYPE     47    105    123    100     88
D472V10, multiclass
        clus
vv       GON4L MUTATED GON4L WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(473) Variable = C19ORF26 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C19ORF26 MUTATED        2      0      1      7
  C19ORF26 WILD-TYPE    133     92    171    169
D473V1, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF26 MUTATED        4      1      3
  C19ORF26 WILD-TYPE    211    154    159
D473V2, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C19ORF26 MUTATED        4      1      2      1
  C19ORF26 WILD-TYPE    131    123    123     59
D473V3, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                1                123
  CLUS_3                2                123
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF26 MUTATED        6      1      1
  C19ORF26 WILD-TYPE    247    101     88
D473V4, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                6                247
  CLUS_2                1                101
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF26 MUTATED        2      4      4
  C19ORF26 WILD-TYPE    162    243    139
D473V5, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                4                243
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF26 MUTATED        0      2      3      1      4
  C19ORF26 WILD-TYPE    121    102     88    120    113
D473V6, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                3                 88
  CLUS_4                1                120
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF26 MUTATED        1      4      5
  C19ORF26 WILD-TYPE    158    247    160
D473V7, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                5                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF26 MUTATED        2      4      3      0      1
  C19ORF26 WILD-TYPE    116    127    148     94     80
D473V8, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                4                127
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF26 MUTATED        1      0      2      2      3
  C19ORF26 WILD-TYPE    117    136    113     38     68
D473V9, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                0                136
  CLUS_3                2                113
  CLUS_4                2                 38
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF26 MUTATED        0      2      2      4      0
  C19ORF26 WILD-TYPE     48    107    128     97     92
D473V10, multiclass
        clus
vv       C19ORF26 MUTATED C19ORF26 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                2                128
  CLUS_4                4                 97
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(474) Variable = PPP1R13B MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP1R13B MUTATED        0      2      5     11
  PPP1R13B WILD-TYPE    135     90    167    165
D474V1, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                0                135
  CLUS_2                2                 90
  CLUS_3                5                167
  CLUS_4               11                165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R13B MUTATED        7      3      5
  PPP1R13B WILD-TYPE    208    152    157
D474V2, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                7                208
  CLUS_2                3                152
  CLUS_3                5                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP1R13B MUTATED        4      5      1      3
  PPP1R13B WILD-TYPE    131    119    124     57
D474V3, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                4                131
  CLUS_2                5                119
  CLUS_3                1                124
  CLUS_4                3                 57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R13B MUTATED        7      5      1
  PPP1R13B WILD-TYPE    246     97     88
D474V4, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                7                246
  CLUS_2                5                 97
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R13B MUTATED        4      9      5
  PPP1R13B WILD-TYPE    160    238    138
D474V5, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                4                160
  CLUS_2                9                238
  CLUS_3                5                138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R13B MUTATED        1      5      5      3      4
  PPP1R13B WILD-TYPE    120     99     86    118    113
D474V6, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                1                120
  CLUS_2                5                 99
  CLUS_3                5                 86
  CLUS_4                3                118
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R13B MUTATED        3     11      4
  PPP1R13B WILD-TYPE    156    240    161
D474V7, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                3                156
  CLUS_2               11                240
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R13B MUTATED        2      3     10      3      0
  PPP1R13B WILD-TYPE    116    128    141     91     81
D474V8, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                2                116
  CLUS_2                3                128
  CLUS_3               10                141
  CLUS_4                3                 91
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R13B MUTATED        2      6      0      2      4
  PPP1R13B WILD-TYPE    116    130    115     38     67
D474V9, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                2                116
  CLUS_2                6                130
  CLUS_3                0                115
  CLUS_4                2                 38
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R13B MUTATED        0      3      7      1      3
  PPP1R13B WILD-TYPE     48    106    123    100     89
D474V10, multiclass
        clus
vv       PPP1R13B MUTATED PPP1R13B WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                7                123
  CLUS_4                1                100
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(475) Variable = CDC25C MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC25C MUTATED        0      1      1      9
  CDC25C WILD-TYPE    135     91    171    167
D475V1, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC25C MUTATED        7      1      2
  CDC25C WILD-TYPE    208    154    160
D475V2, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              7              208
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC25C MUTATED        4      5      0      0
  CDC25C WILD-TYPE    131    119    125     60
D475V3, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              4              131
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC25C MUTATED        5      4      0
  CDC25C WILD-TYPE    248     98     89
D475V4, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              5              248
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC25C MUTATED        1      5      4
  CDC25C WILD-TYPE    163    242    139
D475V5, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC25C MUTATED        2      2      4      0      2
  CDC25C WILD-TYPE    119    102     87    121    115
D475V6, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CDC25C MUTATED        0      9      2
  CDC25C WILD-TYPE    159    242    163
D475V7, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              0              159
  CLUS_2              9              242
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC25C MUTATED        1      3      5      0      2
  CDC25C WILD-TYPE    117    128    146     94     79
D475V8, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC25C MUTATED        0      2      3      1      2
  CDC25C WILD-TYPE    118    134    112     39     69
D475V9, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC25C MUTATED        1      2      3      2      0
  CDC25C WILD-TYPE     47    107    127     99     92
D475V10, multiclass
        clus
vv       CDC25C MUTATED CDC25C WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(476) Variable = IFRD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFRD1 MUTATED        1      0      1      8
  IFRD1 WILD-TYPE    134     92    171    168
D476V1, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFRD1 MUTATED        5      0      2
  IFRD1 WILD-TYPE    210    155    160
D476V2, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFRD1 MUTATED        4      5      0      0
  IFRD1 WILD-TYPE    131    119    125     60
D476V3, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFRD1 MUTATED        6      2      1
  IFRD1 WILD-TYPE    247    100     88
D476V4, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFRD1 MUTATED        0      4      5
  IFRD1 WILD-TYPE    164    243    138
D476V5, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFRD1 MUTATED        0      1      5      0      3
  IFRD1 WILD-TYPE    121    103     86    121    114
D476V6, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFRD1 MUTATED        0     10      0
  IFRD1 WILD-TYPE    159    241    165
D476V7, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            10             241
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFRD1 MUTATED        1      2      7      0      0
  IFRD1 WILD-TYPE    117    129    144     94     81
D476V8, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFRD1 MUTATED        0      1      0      1      5
  IFRD1 WILD-TYPE    118    135    115     39     66
D476V9, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFRD1 MUTATED        0      2      5      0      0
  IFRD1 WILD-TYPE     48    107    125    101     92
D476V10, multiclass
        clus
vv       IFRD1 MUTATED IFRD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(477) Variable = TM6SF1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TM6SF1 MUTATED        0      0      0      9
  TM6SF1 WILD-TYPE    135     92    172    167
D477V1, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM6SF1 MUTATED        6      0      1
  TM6SF1 WILD-TYPE    209    155    161
D477V2, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TM6SF1 MUTATED        4      4      1      0
  TM6SF1 WILD-TYPE    131    120    124     60
D477V3, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM6SF1 MUTATED        6      2      1
  TM6SF1 WILD-TYPE    247    100     88
D477V4, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM6SF1 MUTATED        0      6      2
  TM6SF1 WILD-TYPE    164    241    141
D477V5, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM6SF1 MUTATED        0      2      4      0      2
  TM6SF1 WILD-TYPE    121    102     87    121    115
D477V6, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM6SF1 MUTATED        0      6      3
  TM6SF1 WILD-TYPE    159    245    162
D477V7, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              6              245
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM6SF1 MUTATED        0      4      3      0      2
  TM6SF1 WILD-TYPE    118    127    148     94     79
D477V8, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM6SF1 MUTATED        0      1      2      0      3
  TM6SF1 WILD-TYPE    118    135    113     40     68
D477V9, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM6SF1 MUTATED        0      1      4      1      0
  TM6SF1 WILD-TYPE     48    108    126    100     92
D477V10, multiclass
        clus
vv       TM6SF1 MUTATED TM6SF1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(478) Variable = CUBN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUBN MUTATED       18     10     10     33
  CUBN WILD-TYPE    117     82    162    143
D478V1, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1           18            117
  CLUS_2           10             82
  CLUS_3           10            162
  CLUS_4           33            143
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUBN MUTATED       37      9     12
  CUBN WILD-TYPE    178    146    150
D478V2, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1           37            178
  CLUS_2            9            146
  CLUS_3           12            150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUBN MUTATED       21     22     13      5
  CUBN WILD-TYPE    114    102    112     55
D478V3, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1           21            114
  CLUS_2           22            102
  CLUS_3           13            112
  CLUS_4            5             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUBN MUTATED       37     13     11
  CUBN WILD-TYPE    216     89     78
D478V4, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1           37            216
  CLUS_2           13             89
  CLUS_3           11             78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUBN MUTATED        9     40     19
  CUBN WILD-TYPE    155    207    124
D478V5, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1            9            155
  CLUS_2           40            207
  CLUS_3           19            124
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUBN MUTATED       15     15     21      3     14
  CUBN WILD-TYPE    106     89     70    118    103
D478V6, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1           15            106
  CLUS_2           15             89
  CLUS_3           21             70
  CLUS_4            3            118
  CLUS_5           14            103
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUBN MUTATED        8     44     20
  CUBN WILD-TYPE    151    207    145
D478V7, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1            8            151
  CLUS_2           44            207
  CLUS_3           20            145
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUBN MUTATED       13     26     20      3     10
  CUBN WILD-TYPE    105    105    131     91     71
D478V8, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1           13            105
  CLUS_2           26            105
  CLUS_3           20            131
  CLUS_4            3             91
  CLUS_5           10             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUBN MUTATED        6     18     13      6      9
  CUBN WILD-TYPE    112    118    102     34     62
D478V9, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1            6            112
  CLUS_2           18            118
  CLUS_3           13            102
  CLUS_4            6             34
  CLUS_5            9             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUBN MUTATED        4     20     13     12      3
  CUBN WILD-TYPE     44     89    117     89     89
D478V10, multiclass
        clus
vv       CUBN MUTATED CUBN WILD-TYPE
  CLUS_1            4             44
  CLUS_2           20             89
  CLUS_3           13            117
  CLUS_4           12             89
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(479) Variable = EIF5A2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF5A2 MUTATED        0      1      0      5
  EIF5A2 WILD-TYPE    135     91    172    171
D479V1, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF5A2 MUTATED        5      0      1
  EIF5A2 WILD-TYPE    210    155    161
D479V2, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF5A2 MUTATED        1      2      0      2
  EIF5A2 WILD-TYPE    134    122    125     58
D479V3, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF5A2 MUTATED        3      2      0
  EIF5A2 WILD-TYPE    250    100     89
D479V4, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF5A2 MUTATED        1      3      2
  EIF5A2 WILD-TYPE    163    244    141
D479V5, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5A2 MUTATED        1      2      3      0      0
  EIF5A2 WILD-TYPE    120    102     88    121    117
D479V6, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF5A2 MUTATED        1      3      2
  EIF5A2 WILD-TYPE    158    248    163
D479V7, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              3              248
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5A2 MUTATED        1      2      3      0      0
  EIF5A2 WILD-TYPE    117    129    148     94     81
D479V8, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5A2 MUTATED        0      1      2      0      3
  EIF5A2 WILD-TYPE    118    135    113     40     68
D479V9, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF5A2 MUTATED        0      2      3      1      0
  EIF5A2 WILD-TYPE     48    107    127    100     92
D479V10, multiclass
        clus
vv       EIF5A2 MUTATED EIF5A2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(480) Variable = HSPA14 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSPA14 MUTATED        2      1      0      3
  HSPA14 WILD-TYPE    133     91    172    173
D480V1, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HSPA14 MUTATED        5      1      0
  HSPA14 WILD-TYPE    210    154    162
D480V2, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSPA14 MUTATED        0      5      0      0
  HSPA14 WILD-TYPE    135    119    125     60
D480V3, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HSPA14 MUTATED        1      4      0
  HSPA14 WILD-TYPE    252     98     89
D480V4, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              1              252
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HSPA14 MUTATED        1      3      2
  HSPA14 WILD-TYPE    163    244    141
D480V5, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPA14 MUTATED        1      1      1      1      2
  HSPA14 WILD-TYPE    120    103     90    120    115
D480V6, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              1               90
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HSPA14 MUTATED        0      6      1
  HSPA14 WILD-TYPE    159    245    164
D480V7, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPA14 MUTATED        2      2      3      0      0
  HSPA14 WILD-TYPE    116    129    148     94     81
D480V8, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPA14 MUTATED        0      4      0      0      2
  HSPA14 WILD-TYPE    118    132    115     40     69
D480V9, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPA14 MUTATED        1      3      2      0      0
  HSPA14 WILD-TYPE     47    106    128    101     92
D480V10, multiclass
        clus
vv       HSPA14 MUTATED HSPA14 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(481) Variable = CHPF2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHPF2 MUTATED        3      2      3     13
  CHPF2 WILD-TYPE    132     90    169    163
D481V1, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHPF2 MUTATED       13      3      2
  CHPF2 WILD-TYPE    202    152    160
D481V2, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             3             152
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHPF2 MUTATED        6      8      3      2
  CHPF2 WILD-TYPE    129    116    122     58
D481V3, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             8             116
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHPF2 MUTATED       12      6      1
  CHPF2 WILD-TYPE    241     96     88
D481V4, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHPF2 MUTATED        4     11      6
  CHPF2 WILD-TYPE    160    236    137
D481V5, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            11             236
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHPF2 MUTATED        0      6      7      3      5
  CHPF2 WILD-TYPE    121     98     84    118    112
D481V6, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             6              98
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHPF2 MUTATED        4     13      4
  CHPF2 WILD-TYPE    155    238    161
D481V7, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            13             238
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHPF2 MUTATED        2      8      7      3      1
  CHPF2 WILD-TYPE    116    123    144     91     80
D481V8, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             123
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHPF2 MUTATED        1      7      4      1      5
  CHPF2 WILD-TYPE    117    129    111     39     66
D481V9, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHPF2 MUTATED        0      7      6      2      3
  CHPF2 WILD-TYPE     48    102    124     99     89
D481V10, multiclass
        clus
vv       CHPF2 MUTATED CHPF2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(482) Variable = FCN2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FCN2 MUTATED        3      1      2      8
  FCN2 WILD-TYPE    132     91    170    168
D482V1, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FCN2 MUTATED        9      3      1
  FCN2 WILD-TYPE    206    152    161
D482V2, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FCN2 MUTATED        6      6      0      1
  FCN2 WILD-TYPE    129    118    125     59
D482V3, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            6            118
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FCN2 MUTATED        8      5      0
  FCN2 WILD-TYPE    245     97     89
D482V4, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FCN2 MUTATED        3      7      3
  FCN2 WILD-TYPE    161    240    140
D482V5, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FCN2 MUTATED        3      0      7      2      1
  FCN2 WILD-TYPE    118    104     84    119    116
D482V6, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            0            104
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FCN2 MUTATED        2      9      3
  FCN2 WILD-TYPE    157    242    162
D482V7, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FCN2 MUTATED        3      5      3      2      1
  FCN2 WILD-TYPE    115    126    148     92     80
D482V8, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FCN2 MUTATED        3      4      3      0      2
  FCN2 WILD-TYPE    115    132    112     40     69
D482V9, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            132
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FCN2 MUTATED        3      4      2      1      2
  FCN2 WILD-TYPE     45    105    128    100     90
D482V10, multiclass
        clus
vv       FCN2 MUTATED FCN2 WILD-TYPE
  CLUS_1            3             45
  CLUS_2            4            105
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(483) Variable = FGF7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF7 MUTATED        0      1      2      4
  FGF7 WILD-TYPE    135     91    170    172
D483V1, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF7 MUTATED        4      1      1
  FGF7 WILD-TYPE    211    154    161
D483V2, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF7 MUTATED        2      1      0      1
  FGF7 WILD-TYPE    133    123    125     59
D483V3, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF7 MUTATED        3      1      0
  FGF7 WILD-TYPE    250    101     89
D483V4, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF7 MUTATED        3      3      1
  FGF7 WILD-TYPE    161    244    142
D483V5, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF7 MUTATED        1      1      3      2      0
  FGF7 WILD-TYPE    120    103     88    119    117
D483V6, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF7 MUTATED        3      4      0
  FGF7 WILD-TYPE    156    247    165
D483V7, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            4            247
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF7 MUTATED        1      3      2      1      0
  FGF7 WILD-TYPE    117    128    149     93     81
D483V8, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF7 MUTATED        2      1      0      1      2
  FGF7 WILD-TYPE    116    135    115     39     69
D483V9, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF7 MUTATED        1      2      2      0      1
  FGF7 WILD-TYPE     47    107    128    101     91
D483V10, multiclass
        clus
vv       FGF7 MUTATED FGF7 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(484) Variable = KIAA0240 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0240 MUTATED        0      2      3     10
  KIAA0240 WILD-TYPE    135     90    169    166
D484V1, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                2                 90
  CLUS_3                3                169
  CLUS_4               10                166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0240 MUTATED        6      3      3
  KIAA0240 WILD-TYPE    209    152    159
D484V2, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                6                209
  CLUS_2                3                152
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0240 MUTATED        3      5      1      1
  KIAA0240 WILD-TYPE    132    119    124     59
D484V3, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                5                119
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0240 MUTATED        7      3      0
  KIAA0240 WILD-TYPE    246     99     89
D484V4, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                7                246
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0240 MUTATED        3      8      4
  KIAA0240 WILD-TYPE    161    239    139
D484V5, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                8                239
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0240 MUTATED        1      4      5      2      3
  KIAA0240 WILD-TYPE    120    100     86    119    114
D484V6, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                4                100
  CLUS_3                5                 86
  CLUS_4                2                119
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0240 MUTATED        3      8      4
  KIAA0240 WILD-TYPE    156    243    161
D484V7, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                8                243
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0240 MUTATED        2      4      5      2      2
  KIAA0240 WILD-TYPE    116    127    146     92     79
D484V8, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                4                127
  CLUS_3                5                146
  CLUS_4                2                 92
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0240 MUTATED        3      2      2      0      4
  KIAA0240 WILD-TYPE    115    134    113     40     67
D484V9, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                2                134
  CLUS_3                2                113
  CLUS_4                0                 40
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0240 MUTATED        0      3      4      2      2
  KIAA0240 WILD-TYPE     48    106    126     99     90
D484V10, multiclass
        clus
vv       KIAA0240 MUTATED KIAA0240 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                4                126
  CLUS_4                2                 99
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(485) Variable = LRP12 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRP12 MUTATED        6      2      9     22
  LRP12 WILD-TYPE    129     90    163    154
D485V1, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             2              90
  CLUS_3             9             163
  CLUS_4            22             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRP12 MUTATED       24      4      7
  LRP12 WILD-TYPE    191    151    155
D485V2, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1            24             191
  CLUS_2             4             151
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRP12 MUTATED       13      9      2      5
  LRP12 WILD-TYPE    122    115    123     55
D485V3, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1            13             122
  CLUS_2             9             115
  CLUS_3             2             123
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRP12 MUTATED       20      6      3
  LRP12 WILD-TYPE    233     96     86
D485V4, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1            20             233
  CLUS_2             6              96
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRP12 MUTATED        7     20      9
  LRP12 WILD-TYPE    157    227    134
D485V5, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            20             227
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP12 MUTATED        2      9     13      6      6
  LRP12 WILD-TYPE    119     95     78    115    111
D485V6, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             9              95
  CLUS_3            13              78
  CLUS_4             6             115
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRP12 MUTATED        6     27      6
  LRP12 WILD-TYPE    153    224    159
D485V7, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            27             224
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP12 MUTATED        7     17     10      3      2
  LRP12 WILD-TYPE    111    114    141     91     79
D485V8, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             7             111
  CLUS_2            17             114
  CLUS_3            10             141
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP12 MUTATED        3     15      3      3      6
  LRP12 WILD-TYPE    115    121    112     37     65
D485V9, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            15             121
  CLUS_3             3             112
  CLUS_4             3              37
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP12 MUTATED        2     14      9      3      2
  LRP12 WILD-TYPE     46     95    121     98     90
D485V10, multiclass
        clus
vv       LRP12 MUTATED LRP12 WILD-TYPE
  CLUS_1             2              46
  CLUS_2            14              95
  CLUS_3             9             121
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(486) Variable = EFHA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHA1 MUTATED        3      1      1     11
  EFHA1 WILD-TYPE    132     91    171    165
D486V1, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA1 MUTATED       10      1      3
  EFHA1 WILD-TYPE    205    154    159
D486V2, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHA1 MUTATED        6      3      0      2
  EFHA1 WILD-TYPE    129    121    125     58
D486V3, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA1 MUTATED        8      3      0
  EFHA1 WILD-TYPE    245     99     89
D486V4, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA1 MUTATED        2     11      2
  EFHA1 WILD-TYPE    162    236    141
D486V5, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            11             236
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA1 MUTATED        1      3      8      1      2
  EFHA1 WILD-TYPE    120    101     83    120    115
D486V6, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA1 MUTATED        1     11      4
  EFHA1 WILD-TYPE    158    240    161
D486V7, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            11             240
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA1 MUTATED        1      9      4      1      1
  EFHA1 WILD-TYPE    117    122    147     93     80
D486V8, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             122
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA1 MUTATED        1      7      3      0      2
  EFHA1 WILD-TYPE    117    129    112     40     69
D486V9, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA1 MUTATED        0      5      5      2      1
  EFHA1 WILD-TYPE     48    104    125     99     91
D486V10, multiclass
        clus
vv       EFHA1 MUTATED EFHA1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(487) Variable = GTF3C1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GTF3C1 MUTATED        3      2      4     30
  GTF3C1 WILD-TYPE    132     90    168    146
D487V1, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4             30              146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C1 MUTATED       23      3      6
  GTF3C1 WILD-TYPE    192    152    156
D487V2, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1             23              192
  CLUS_2              3              152
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GTF3C1 MUTATED       13     16      4      1
  GTF3C1 WILD-TYPE    122    108    121     59
D487V3, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1             13              122
  CLUS_2             16              108
  CLUS_3              4              121
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C1 MUTATED       19     10      5
  GTF3C1 WILD-TYPE    234     92     84
D487V4, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1             19              234
  CLUS_2             10               92
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C1 MUTATED        4     24     10
  GTF3C1 WILD-TYPE    160    223    133
D487V5, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             24              223
  CLUS_3             10              133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C1 MUTATED        2      7     17      2     10
  GTF3C1 WILD-TYPE    119     97     74    119    107
D487V6, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              7               97
  CLUS_3             17               74
  CLUS_4              2              119
  CLUS_5             10              107
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C1 MUTATED        4     29      6
  GTF3C1 WILD-TYPE    155    222    159
D487V7, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             29              222
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C1 MUTATED        4     14     16      2      3
  GTF3C1 WILD-TYPE    114    117    135     92     78
D487V8, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2             14              117
  CLUS_3             16              135
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C1 MUTATED        2     15      3      1      9
  GTF3C1 WILD-TYPE    116    121    112     39     62
D487V9, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             15              121
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              9               62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C1 MUTATED        0     11     16      1      2
  GTF3C1 WILD-TYPE     48     98    114    100     90
D487V10, multiclass
        clus
vv       GTF3C1 MUTATED GTF3C1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2             11               98
  CLUS_3             16              114
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(488) Variable = KIAA0100 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0100 MUTATED        4      4      1     20
  KIAA0100 WILD-TYPE    131     88    171    156
D488V1, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                4                 88
  CLUS_3                1                171
  CLUS_4               20                156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0100 MUTATED       16      2      2
  KIAA0100 WILD-TYPE    199    153    160
D488V2, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1               16                199
  CLUS_2                2                153
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0100 MUTATED        8      7      4      3
  KIAA0100 WILD-TYPE    127    117    121     57
D488V3, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                8                127
  CLUS_2                7                117
  CLUS_3                4                121
  CLUS_4                3                 57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0100 MUTATED       12      6      4
  KIAA0100 WILD-TYPE    241     96     85
D488V4, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                6                 96
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0100 MUTATED        5     17      7
  KIAA0100 WILD-TYPE    159    230    136
D488V5, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                5                159
  CLUS_2               17                230
  CLUS_3                7                136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0100 MUTATED        2      8     10      3      6
  KIAA0100 WILD-TYPE    119     96     81    118    111
D488V6, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                8                 96
  CLUS_3               10                 81
  CLUS_4                3                118
  CLUS_5                6                111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0100 MUTATED        4     17      8
  KIAA0100 WILD-TYPE    155    234    157
D488V7, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                4                155
  CLUS_2               17                234
  CLUS_3                8                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0100 MUTATED        4     10     10      1      4
  KIAA0100 WILD-TYPE    114    121    141     93     77
D488V8, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                4                114
  CLUS_2               10                121
  CLUS_3               10                141
  CLUS_4                1                 93
  CLUS_5                4                 77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0100 MUTATED        4      4      3      2      5
  KIAA0100 WILD-TYPE    114    132    112     38     66
D488V9, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                4                114
  CLUS_2                4                132
  CLUS_3                3                112
  CLUS_4                2                 38
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0100 MUTATED        2      5      7      3      1
  KIAA0100 WILD-TYPE     46    104    123     98     91
D488V10, multiclass
        clus
vv       KIAA0100 MUTATED KIAA0100 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                5                104
  CLUS_3                7                123
  CLUS_4                3                 98
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(489) Variable = RPS20 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPS20 MUTATED        1      0      0      3
  RPS20 WILD-TYPE    134     92    172    173
D489V1, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPS20 MUTATED        2      0      1
  RPS20 WILD-TYPE    213    155    161
D489V2, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPS20 MUTATED        2      1      1      0
  RPS20 WILD-TYPE    133    123    124     60
D489V3, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPS20 MUTATED        2      2      0
  RPS20 WILD-TYPE    251    100     89
D489V4, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPS20 MUTATED        0      1      3
  RPS20 WILD-TYPE    164    246    140
D489V5, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             1             246
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS20 MUTATED        1      0      0      0      3
  RPS20 WILD-TYPE    120    104     91    121    114
D489V6, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             0              91
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RPS20 MUTATED        1      3      0
  RPS20 WILD-TYPE    158    248    165
D489V7, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             3             248
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS20 MUTATED        0      0      4      0      0
  RPS20 WILD-TYPE    118    131    147     94     81
D489V8, multiclass
        clus
vv       RPS20 MUTATED RPS20 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             131
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS20 MUTATED        0      0      0      1      1
  RPS20 WILD-TYPE    118    136    115     39     70
D489V9, multiclass
[1] "Remove cluster labels:" "RPS20 MUTATED"         
clus
  RPS20 MUTATED RPS20 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578      TCGA-D7-8579 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YY 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177      TCGA-F1-6874 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735      TCGA-FP-7829 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209      TCGA-FP-8210 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE      TCGA-FP-A9TM 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS20 MUTATED        0      0      1      1      0
  RPS20 WILD-TYPE     48    109    129    100     92
D489V10, multiclass
[1] "Remove cluster labels:" "RPS20 MUTATED"         
clus
  RPS20 MUTATED RPS20 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578      TCGA-D7-8579 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YY 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177      TCGA-F1-6874 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735      TCGA-FP-7829 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209      TCGA-FP-8210 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE      TCGA-FP-A9TM 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"RPS20 WILD-TYPE" "RPS20 WILD-TYPE" 

Clustering(490) Variable = FASTKD1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FASTKD1 MUTATED        1      1      1     11
  FASTKD1 WILD-TYPE    134     91    171    165
D490V1, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FASTKD1 MUTATED        9      3      2
  FASTKD1 WILD-TYPE    206    152    160
D490V2, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               9               206
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FASTKD1 MUTATED        5      7      0      2
  FASTKD1 WILD-TYPE    130    117    125     58
D490V3, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               7               117
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FASTKD1 MUTATED        9      4      1
  FASTKD1 WILD-TYPE    244     98     88
D490V4, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               9               244
  CLUS_2               4                98
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FASTKD1 MUTATED        2      9      3
  FASTKD1 WILD-TYPE    162    238    140
D490V5, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               9               238
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FASTKD1 MUTATED        2      3      6      0      3
  FASTKD1 WILD-TYPE    119    101     85    121    114
D490V6, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3               6                85
  CLUS_4               0               121
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FASTKD1 MUTATED        3      9      2
  FASTKD1 WILD-TYPE    156    242    163
D490V7, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               9               242
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FASTKD1 MUTATED        3      6      5      0      0
  FASTKD1 WILD-TYPE    115    125    146     94     81
D490V8, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FASTKD1 MUTATED        1      7      1      0      2
  FASTKD1 WILD-TYPE    117    129    114     40     69
D490V9, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               7               129
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FASTKD1 MUTATED        1      6      3      1      0
  FASTKD1 WILD-TYPE     47    103    127    100     92
D490V10, multiclass
        clus
vv       FASTKD1 MUTATED FASTKD1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               6               103
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(491) Variable = EOMES MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EOMES MUTATED        4      0      0      7
  EOMES WILD-TYPE    131     92    172    169
D491V1, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EOMES MUTATED        5      2      2
  EOMES WILD-TYPE    210    153    160
D491V2, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EOMES MUTATED        2      6      1      0
  EOMES WILD-TYPE    133    118    124     60
D491V3, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             2             133
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EOMES MUTATED        4      4      1
  EOMES WILD-TYPE    249     98     88
D491V4, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             4             249
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EOMES MUTATED        1      6      4
  EOMES WILD-TYPE    163    241    139
D491V5, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EOMES MUTATED        2      3      3      0      3
  EOMES WILD-TYPE    119    101     88    121    114
D491V6, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EOMES MUTATED        1      7      3
  EOMES WILD-TYPE    158    244    162
D491V7, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EOMES MUTATED        2      5      2      0      2
  EOMES WILD-TYPE    116    126    149     94     79
D491V8, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EOMES MUTATED        1      5      2      0      1
  EOMES WILD-TYPE    117    131    113     40     70
D491V9, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EOMES MUTATED        1      3      3      2      0
  EOMES WILD-TYPE     47    106    127     99     92
D491V10, multiclass
        clus
vv       EOMES MUTATED EOMES WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(492) Variable = ULK2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ULK2 MUTATED        1      3      2      7
  ULK2 WILD-TYPE    134     89    170    169
D492V1, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3             89
  CLUS_3            2            170
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ULK2 MUTATED        7      2      3
  ULK2 WILD-TYPE    208    153    159
D492V2, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ULK2 MUTATED        3      5      0      1
  ULK2 WILD-TYPE    132    119    125     59
D492V3, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ULK2 MUTATED        5      4      0
  ULK2 WILD-TYPE    248     98     89
D492V4, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            4             98
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ULK2 MUTATED        1      9      1
  ULK2 WILD-TYPE    163    238    142
D492V5, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            9            238
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ULK2 MUTATED        1      6      3      0      1
  ULK2 WILD-TYPE    120     98     88    121    116
D492V6, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            6             98
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ULK2 MUTATED        3      6      4
  ULK2 WILD-TYPE    156    245    161
D492V7, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ULK2 MUTATED        3      4      3      0      3
  ULK2 WILD-TYPE    115    127    148     94     78
D492V8, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ULK2 MUTATED        3      3      2      0      3
  ULK2 WILD-TYPE    115    133    113     40     68
D492V9, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ULK2 MUTATED        0      6      2      3      0
  ULK2 WILD-TYPE     48    103    128     98     92
D492V10, multiclass
        clus
vv       ULK2 MUTATED ULK2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            2            128
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(493) Variable = INSIG2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INSIG2 MUTATED        0      0      1      7
  INSIG2 WILD-TYPE    135     92    171    169
D493V1, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INSIG2 MUTATED        5      1      1
  INSIG2 WILD-TYPE    210    154    161
D493V2, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INSIG2 MUTATED        5      2      0      0
  INSIG2 WILD-TYPE    130    122    125     60
D493V3, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INSIG2 MUTATED        6      1      0
  INSIG2 WILD-TYPE    247    101     89
D493V4, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INSIG2 MUTATED        1      4      2
  INSIG2 WILD-TYPE    163    243    141
D493V5, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSIG2 MUTATED        0      3      2      1      1
  INSIG2 WILD-TYPE    121    101     89    120    116
D493V6, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INSIG2 MUTATED        1      6      1
  INSIG2 WILD-TYPE    158    245    164
D493V7, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSIG2 MUTATED        0      3      3      1      1
  INSIG2 WILD-TYPE    118    128    148     93     80
D493V8, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSIG2 MUTATED        1      1      1      0      3
  INSIG2 WILD-TYPE    117    135    114     40     68
D493V9, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSIG2 MUTATED        0      1      3      1      1
  INSIG2 WILD-TYPE     48    108    127    100     91
D493V10, multiclass
        clus
vv       INSIG2 MUTATED INSIG2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(494) Variable = DPAGT1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPAGT1 MUTATED        1      0      2      3
  DPAGT1 WILD-TYPE    134     92    170    173
D494V1, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DPAGT1 MUTATED        3      0      2
  DPAGT1 WILD-TYPE    212    155    160
D494V2, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DPAGT1 MUTATED        3      1      1      0
  DPAGT1 WILD-TYPE    132    123    124     60
D494V3, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1              123
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DPAGT1 MUTATED        3      1      1
  DPAGT1 WILD-TYPE    250    101     88
D494V4, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DPAGT1 MUTATED        0      4      2
  DPAGT1 WILD-TYPE    164    243    141
D494V5, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPAGT1 MUTATED        1      2      2      0      1
  DPAGT1 WILD-TYPE    120    102     89    121    116
D494V6, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DPAGT1 MUTATED        0      5      1
  DPAGT1 WILD-TYPE    159    246    164
D494V7, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPAGT1 MUTATED        1      3      2      0      0
  DPAGT1 WILD-TYPE    117    128    149     94     81
D494V8, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPAGT1 MUTATED        0      2      0      2      1
  DPAGT1 WILD-TYPE    118    134    115     38     70
D494V9, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DPAGT1 MUTATED        0      3      1      1      0
  DPAGT1 WILD-TYPE     48    106    129    100     92
D494V10, multiclass
        clus
vv       DPAGT1 MUTATED DPAGT1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              1              129
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(495) Variable = C6ORF165 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C6ORF165 MUTATED        3      0      1     14
  C6ORF165 WILD-TYPE    132     92    171    162
D495V1, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4               14                162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF165 MUTATED       10      2      4
  C6ORF165 WILD-TYPE    205    153    158
D495V2, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1               10                205
  CLUS_2                2                153
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C6ORF165 MUTATED        4      8      1      2
  C6ORF165 WILD-TYPE    131    116    124     58
D495V3, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                8                116
  CLUS_3                1                124
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF165 MUTATED        8      7      0
  C6ORF165 WILD-TYPE    245     95     89
D495V4, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                8                245
  CLUS_2                7                 95
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF165 MUTATED        4     10      3
  C6ORF165 WILD-TYPE    160    237    140
D495V5, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               10                237
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF165 MUTATED        2      5      7      0      3
  C6ORF165 WILD-TYPE    119     99     84    121    114
D495V6, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                5                 99
  CLUS_3                7                 84
  CLUS_4                0                121
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C6ORF165 MUTATED        3     12      2
  C6ORF165 WILD-TYPE    156    239    163
D495V7, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               12                239
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF165 MUTATED        4      5      7      0      1
  C6ORF165 WILD-TYPE    114    126    144     94     80
D495V8, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                4                114
  CLUS_2                5                126
  CLUS_3                7                144
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF165 MUTATED        2      6      0      1      4
  C6ORF165 WILD-TYPE    116    130    115     39     67
D495V9, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                6                130
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF165 MUTATED        2      6      4      1      0
  C6ORF165 WILD-TYPE     46    103    126    100     92
D495V10, multiclass
        clus
vv       C6ORF165 MUTATED C6ORF165 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                6                103
  CLUS_3                4                126
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(496) Variable = YBX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YBX2 MUTATED        1      0      3      4
  YBX2 WILD-TYPE    134     92    169    172
D496V1, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  YBX2 MUTATED        4      3      0
  YBX2 WILD-TYPE    211    152    162
D496V2, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            3            152
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YBX2 MUTATED        5      2      1      0
  YBX2 WILD-TYPE    130    122    124     60
D496V3, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  YBX2 MUTATED        7      1      0
  YBX2 WILD-TYPE    246    101     89
D496V4, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  YBX2 MUTATED        2      6      0
  YBX2 WILD-TYPE    162    241    143
D496V5, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            6            241
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YBX2 MUTATED        0      3      3      2      0
  YBX2 WILD-TYPE    121    101     88    119    117
D496V6, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  YBX2 MUTATED        2      6      0
  YBX2 WILD-TYPE    157    245    165
D496V7, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YBX2 MUTATED        0      4      2      2      0
  YBX2 WILD-TYPE    118    127    149     92     81
D496V8, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            2            149
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YBX2 MUTATED        2      4      0      0      1
  YBX2 WILD-TYPE    116    132    115     40     70
D496V9, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YBX2 MUTATED        0      3      2      0      2
  YBX2 WILD-TYPE     48    106    128    101     90
D496V10, multiclass
        clus
vv       YBX2 MUTATED YBX2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(497) Variable = CCDC138 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC138 MUTATED        3      0      1      7
  CCDC138 WILD-TYPE    132     92    171    169
D497V1, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC138 MUTATED        5      1      3
  CCDC138 WILD-TYPE    210    154    159
D497V2, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC138 MUTATED        3      5      0      1
  CCDC138 WILD-TYPE    132    119    125     59
D497V3, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               5               119
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC138 MUTATED        4      5      0
  CCDC138 WILD-TYPE    249     97     89
D497V4, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               5                97
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC138 MUTATED        3      5      3
  CCDC138 WILD-TYPE    161    242    140
D497V5, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               5               242
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC138 MUTATED        1      2      5      1      2
  CCDC138 WILD-TYPE    120    102     86    120    115
D497V6, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC138 MUTATED        1      6      4
  CCDC138 WILD-TYPE    158    245    161
D497V7, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               6               245
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC138 MUTATED        2      3      5      1      0
  CCDC138 WILD-TYPE    116    128    146     93     81
D497V8, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               3               128
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC138 MUTATED        1      0      2      2      3
  CCDC138 WILD-TYPE    117    136    113     38     68
D497V9, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               0               136
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC138 MUTATED        1      2      4      0      1
  CCDC138 WILD-TYPE     47    107    126    101     91
D497V10, multiclass
        clus
vv       CCDC138 MUTATED CCDC138 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               4               126
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(498) Variable = METTL6 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  METTL6 MUTATED        0      0      0      5
  METTL6 WILD-TYPE    135     92    172    171
D498V1, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  METTL6 MUTATED        3      0      0
  METTL6 WILD-TYPE    212    155    162
D498V2, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  METTL6 MUTATED        3      2      0      0
  METTL6 WILD-TYPE    132    122    125     60
D498V3, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  METTL6 MUTATED        3      2      0
  METTL6 WILD-TYPE    250    100     89
D498V4, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  METTL6 MUTATED        1      3      1
  METTL6 WILD-TYPE    163    244    142
D498V5, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  METTL6 MUTATED        0      1      3      0      1
  METTL6 WILD-TYPE    121    103     88    121    116
D498V6, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  METTL6 MUTATED        0      5      0
  METTL6 WILD-TYPE    159    246    165
D498V7, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  METTL6 MUTATED        1      3      1      0      0
  METTL6 WILD-TYPE    117    128    150     94     81
D498V8, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  METTL6 MUTATED        0      1      0      1      1
  METTL6 WILD-TYPE    118    135    115     39     70
D498V9, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  METTL6 MUTATED        1      2      0      0      0
  METTL6 WILD-TYPE     47    107    130    101     92
D498V10, multiclass
        clus
vv       METTL6 MUTATED METTL6 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              0              130
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(499) Variable = TRIP10 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIP10 MUTATED        2      0      4      8
  TRIP10 WILD-TYPE    133     92    168    168
D499V1, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              4              168
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP10 MUTATED        9      4      2
  TRIP10 WILD-TYPE    206    151    160
D499V2, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              4              151
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIP10 MUTATED        3      6      0      2
  TRIP10 WILD-TYPE    132    118    125     58
D499V3, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              6              118
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP10 MUTATED        7      4      0
  TRIP10 WILD-TYPE    246     98     89
D499V4, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP10 MUTATED        5      9      1
  TRIP10 WILD-TYPE    159    238    142
D499V5, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              9              238
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP10 MUTATED        2      2      7      2      2
  TRIP10 WILD-TYPE    119    102     84    119    115
D499V6, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              7               84
  CLUS_4              2              119
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIP10 MUTATED        5      7      3
  TRIP10 WILD-TYPE    154    244    162
D499V7, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              5              154
  CLUS_2              7              244
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP10 MUTATED        3      7      3      2      0
  TRIP10 WILD-TYPE    115    124    148     92     81
D499V8, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              124
  CLUS_3              3              148
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP10 MUTATED        4      4      1      0      3
  TRIP10 WILD-TYPE    114    132    114     40     68
D499V9, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIP10 MUTATED        2      4      3      1      2
  TRIP10 WILD-TYPE     46    105    127    100     90
D499V10, multiclass
        clus
vv       TRIP10 MUTATED TRIP10 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(500) Variable = C19ORF70 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C19ORF70 MUTATED        2      1      0      4
  C19ORF70 WILD-TYPE    133     91    172    172
D500V1, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF70 MUTATED        6      0      0
  C19ORF70 WILD-TYPE    209    155    162
D500V2, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                6                209
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C19ORF70 MUTATED        1      3      0      1
  C19ORF70 WILD-TYPE    134    121    125     59
D500V3, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF70 MUTATED        3      2      0
  C19ORF70 WILD-TYPE    250    100     89
D500V4, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF70 MUTATED        0      5      1
  C19ORF70 WILD-TYPE    164    242    142
D500V5, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                5                242
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF70 MUTATED        0      1      5      0      0
  C19ORF70 WILD-TYPE    121    103     86    121    117
D500V6, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                5                 86
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C19ORF70 MUTATED        0      7      0
  C19ORF70 WILD-TYPE    159    244    165
D500V7, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                7                244
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF70 MUTATED        0      6      1      0      0
  C19ORF70 WILD-TYPE    118    125    150     94     81
D500V8, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                125
  CLUS_3                1                150
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF70 MUTATED        0      3      0      1      2
  C19ORF70 WILD-TYPE    118    133    115     39     69
D500V9, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                133
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C19ORF70 MUTATED        0      5      1      0      0
  C19ORF70 WILD-TYPE     48    104    129    101     92
D500V10, multiclass
        clus
vv       C19ORF70 MUTATED C19ORF70 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                1                129
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(501) Variable = C16ORF70 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF70 MUTATED        0      0      1      6
  C16ORF70 WILD-TYPE    135     92    171    170
D501V1, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF70 MUTATED        4      1      0
  C16ORF70 WILD-TYPE    211    154    162
D501V2, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF70 MUTATED        1      5      0      0
  C16ORF70 WILD-TYPE    134    119    125     60
D501V3, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                5                119
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF70 MUTATED        2      4      0
  C16ORF70 WILD-TYPE    251     98     89
D501V4, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                2                251
  CLUS_2                4                 98
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF70 MUTATED        1      4      1
  C16ORF70 WILD-TYPE    163    243    142
D501V5, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                4                243
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF70 MUTATED        0      2      2      1      1
  C16ORF70 WILD-TYPE    121    102     89    120    116
D501V6, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                2                 89
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C16ORF70 MUTATED        1      4      2
  C16ORF70 WILD-TYPE    158    247    163
D501V7, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF70 MUTATED        0      1      5      1      0
  C16ORF70 WILD-TYPE    118    130    146     93     81
D501V8, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                130
  CLUS_3                5                146
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF70 MUTATED        1      2      1      0      1
  C16ORF70 WILD-TYPE    117    134    114     40     70
D501V9, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                134
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF70 MUTATED        0      1      3      0      1
  C16ORF70 WILD-TYPE     48    108    127    101     91
D501V10, multiclass
        clus
vv       C16ORF70 MUTATED C16ORF70 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(502) Variable = MARCH7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MARCH7 MUTATED        0      1      1      7
  MARCH7 WILD-TYPE    135     91    171    169
D502V1, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MARCH7 MUTATED        3      0      4
  MARCH7 WILD-TYPE    212    155    158
D502V2, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MARCH7 MUTATED        1      3      2      1
  MARCH7 WILD-TYPE    134    121    123     59
D502V3, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MARCH7 MUTATED        4      2      1
  MARCH7 WILD-TYPE    249    100     88
D502V4, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MARCH7 MUTATED        1      4      2
  MARCH7 WILD-TYPE    163    243    141
D502V5, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARCH7 MUTATED        1      1      3      1      1
  MARCH7 WILD-TYPE    120    103     88    120    116
D502V6, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MARCH7 MUTATED        2      5      2
  MARCH7 WILD-TYPE    157    246    163
D502V7, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARCH7 MUTATED        1      3      3      1      1
  MARCH7 WILD-TYPE    117    128    148     93     80
D502V8, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARCH7 MUTATED        0      3      1      1      2
  MARCH7 WILD-TYPE    118    133    114     39     69
D502V9, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARCH7 MUTATED        0      3      2      1      1
  MARCH7 WILD-TYPE     48    106    128    100     91
D502V10, multiclass
        clus
vv       MARCH7 MUTATED MARCH7 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(503) Variable = PPP1R15A MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP1R15A MUTATED        0      2      0      5
  PPP1R15A WILD-TYPE    135     90    172    171
D503V1, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                0                135
  CLUS_2                2                 90
  CLUS_3                0                172
  CLUS_4                5                171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R15A MUTATED        5      1      0
  PPP1R15A WILD-TYPE    210    154    162
D503V2, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                5                210
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP1R15A MUTATED        0      3      2      0
  PPP1R15A WILD-TYPE    135    121    123     60
D503V3, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                0                135
  CLUS_2                3                121
  CLUS_3                2                123
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R15A MUTATED        2      2      1
  PPP1R15A WILD-TYPE    251    100     88
D503V4, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                2                251
  CLUS_2                2                100
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R15A MUTATED        1      3      3
  PPP1R15A WILD-TYPE    163    244    140
D503V5, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                1                163
  CLUS_2                3                244
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R15A MUTATED        0      1      2      1      3
  PPP1R15A WILD-TYPE    121    103     89    120    114
D503V6, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                2                 89
  CLUS_4                1                120
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R15A MUTATED        1      4      2
  PPP1R15A WILD-TYPE    158    247    163
D503V7, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R15A MUTATED        1      2      3      1      0
  PPP1R15A WILD-TYPE    117    129    148     93     81
D503V8, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                129
  CLUS_3                3                148
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R15A MUTATED        1      1      1      1      2
  PPP1R15A WILD-TYPE    117    135    114     39     69
D503V9, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                1                117
  CLUS_2                1                135
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R15A MUTATED        0      2      1      2      1
  PPP1R15A WILD-TYPE     48    107    129     99     91
D503V10, multiclass
        clus
vv       PPP1R15A MUTATED PPP1R15A WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                1                129
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(504) Variable = USP13 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP13 MUTATED        1      1      3      8
  USP13 WILD-TYPE    134     91    169    168
D504V1, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP13 MUTATED        5      2      2
  USP13 WILD-TYPE    210    153    160
D504V2, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP13 MUTATED        5      4      1      0
  USP13 WILD-TYPE    130    120    124     60
D504V3, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP13 MUTATED        8      2      0
  USP13 WILD-TYPE    245    100     89
D504V4, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP13 MUTATED        3      8      1
  USP13 WILD-TYPE    161    239    142
D504V5, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP13 MUTATED        2      2      6      1      1
  USP13 WILD-TYPE    119    102     85    120    116
D504V6, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP13 MUTATED        1     10      2
  USP13 WILD-TYPE    158    241    163
D504V7, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP13 MUTATED        1      4      6      1      1
  USP13 WILD-TYPE    117    127    145     93     80
D504V8, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP13 MUTATED        1      3      2      0      3
  USP13 WILD-TYPE    117    133    113     40     68
D504V9, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP13 MUTATED        0      3      4      1      1
  USP13 WILD-TYPE     48    106    126    100     91
D504V10, multiclass
        clus
vv       USP13 MUTATED USP13 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(505) Variable = DOK1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOK1 MUTATED        0      0      3      4
  DOK1 WILD-TYPE    135     92    169    172
D505V1, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK1 MUTATED        4      2      0
  DOK1 WILD-TYPE    211    153    162
D505V2, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOK1 MUTATED        4      2      0      1
  DOK1 WILD-TYPE    131    122    125     59
D505V3, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK1 MUTATED        6      1      0
  DOK1 WILD-TYPE    247    101     89
D505V4, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK1 MUTATED        2      5      0
  DOK1 WILD-TYPE    162    242    143
D505V5, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK1 MUTATED        0      2      3      2      0
  DOK1 WILD-TYPE    121    102     88    119    117
D505V6, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK1 MUTATED        2      5      0
  DOK1 WILD-TYPE    157    246    165
D505V7, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            5            246
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK1 MUTATED        0      3      2      2      0
  DOK1 WILD-TYPE    118    128    149     92     81
D505V8, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK1 MUTATED        2      1      0      0      1
  DOK1 WILD-TYPE    116    135    115     40     70
D505V9, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK1 MUTATED        0      1      1      0      2
  DOK1 WILD-TYPE     48    108    129    101     90
D505V10, multiclass
        clus
vv       DOK1 MUTATED DOK1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(506) Variable = CD33 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD33 MUTATED        2      2      2      5
  CD33 WILD-TYPE    133     90    170    171
D506V1, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD33 MUTATED        6      4      0
  CD33 WILD-TYPE    209    151    162
D506V2, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            4            151
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD33 MUTATED        8      2      0      0
  CD33 WILD-TYPE    127    122    125     60
D506V3, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD33 MUTATED        9      1      0
  CD33 WILD-TYPE    244    101     89
D506V4, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD33 MUTATED        2      7      2
  CD33 WILD-TYPE    162    240    141
D506V5, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            7            240
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD33 MUTATED        2      4      2      1      2
  CD33 WILD-TYPE    119    100     89    120    115
D506V6, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            4            100
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD33 MUTATED        2      6      2
  CD33 WILD-TYPE    157    245    163
D506V7, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD33 MUTATED        4      2      2      1      1
  CD33 WILD-TYPE    114    129    149     93     80
D506V8, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD33 MUTATED        1      3      1      1      2
  CD33 WILD-TYPE    117    133    114     39     69
D506V9, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD33 MUTATED        1      2      2      2      1
  CD33 WILD-TYPE     47    107    128     99     91
D506V10, multiclass
        clus
vv       CD33 MUTATED CD33 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(507) Variable = MYLK3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYLK3 MUTATED        1      1      3      7
  MYLK3 WILD-TYPE    134     91    169    169
D507V1, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYLK3 MUTATED        6      2      4
  MYLK3 WILD-TYPE    209    153    158
D507V2, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYLK3 MUTATED        5      3      4      0
  MYLK3 WILD-TYPE    130    121    121     60
D507V3, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             4             121
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYLK3 MUTATED        9      1      2
  MYLK3 WILD-TYPE    244    101     87
D507V4, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYLK3 MUTATED        3      5      4
  MYLK3 WILD-TYPE    161    242    139
D507V5, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             5             242
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYLK3 MUTATED        1      3      3      1      4
  MYLK3 WILD-TYPE    120    101     88    120    113
D507V6, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYLK3 MUTATED        2      6      4
  MYLK3 WILD-TYPE    157    245    161
D507V7, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             6             245
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYLK3 MUTATED        3      3      2      1      3
  MYLK3 WILD-TYPE    115    128    149     93     78
D507V8, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYLK3 MUTATED        2      3      4      1      1
  MYLK3 WILD-TYPE    116    133    111     39     70
D507V9, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYLK3 MUTATED        2      3      2      3      1
  MYLK3 WILD-TYPE     46    106    128     98     91
D507V10, multiclass
        clus
vv       MYLK3 MUTATED MYLK3 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(508) Variable = GPATCH4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPATCH4 MUTATED        4      1      2      6
  GPATCH4 WILD-TYPE    131     91    170    170
D508V1, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH4 MUTATED        8      3      0
  GPATCH4 WILD-TYPE    207    152    162
D508V2, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               3               152
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPATCH4 MUTATED        5      4      0      0
  GPATCH4 WILD-TYPE    130    120    125     60
D508V3, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH4 MUTATED        8      1      0
  GPATCH4 WILD-TYPE    245    101     89
D508V4, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH4 MUTATED        3      9      1
  GPATCH4 WILD-TYPE    161    238    142
D508V5, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               9               238
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH4 MUTATED        2      3      6      1      1
  GPATCH4 WILD-TYPE    119    101     85    120    116
D508V6, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH4 MUTATED        2     11      0
  GPATCH4 WILD-TYPE    157    240    165
D508V7, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              11               240
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH4 MUTATED        2      9      1      1      0
  GPATCH4 WILD-TYPE    116    122    150     93     81
D508V8, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               9               122
  CLUS_3               1               150
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH4 MUTATED        1      7      0      1      1
  GPATCH4 WILD-TYPE    117    129    115     39     70
D508V9, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               7               129
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH4 MUTATED        0      6      3      0      1
  GPATCH4 WILD-TYPE     48    103    127    101     91
D508V10, multiclass
        clus
vv       GPATCH4 MUTATED GPATCH4 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               6               103
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(509) Variable = CADPS2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CADPS2 MUTATED        2      2      1      6
  CADPS2 WILD-TYPE    133     90    171    170
D509V1, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CADPS2 MUTATED        9      0      3
  CADPS2 WILD-TYPE    206    155    159
D509V2, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              0              155
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CADPS2 MUTATED        4      2      0      1
  CADPS2 WILD-TYPE    131    122    125     59
D509V3, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CADPS2 MUTATED        6      1      0
  CADPS2 WILD-TYPE    247    101     89
D509V4, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CADPS2 MUTATED        1      7      4
  CADPS2 WILD-TYPE    163    240    139
D509V5, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CADPS2 MUTATED        1      2      6      1      2
  CADPS2 WILD-TYPE    120    102     85    120    115
D509V6, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CADPS2 MUTATED        1      9      2
  CADPS2 WILD-TYPE    158    242    163
D509V7, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CADPS2 MUTATED        1      6      4      0      1
  CADPS2 WILD-TYPE    117    125    147     94     80
D509V8, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CADPS2 MUTATED        0      4      2      3      3
  CADPS2 WILD-TYPE    118    132    113     37     68
D509V9, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              3               37
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CADPS2 MUTATED        0      6      4      2      0
  CADPS2 WILD-TYPE     48    103    126     99     92
D509V10, multiclass
        clus
vv       CADPS2 MUTATED CADPS2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(510) Variable = LTBP3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LTBP3 MUTATED        1      2      0     19
  LTBP3 WILD-TYPE    134     90    172    157
D510V1, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LTBP3 MUTATED       12      2      5
  LTBP3 WILD-TYPE    203    153    157
D510V2, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             2             153
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LTBP3 MUTATED        8      5      2      2
  LTBP3 WILD-TYPE    127    119    123     58
D510V3, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LTBP3 MUTATED       10      3      4
  LTBP3 WILD-TYPE    243     99     85
D510V4, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             3              99
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LTBP3 MUTATED        3     10      9
  LTBP3 WILD-TYPE    161    237    134
D510V5, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            10             237
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LTBP3 MUTATED        1      3      8      2      8
  LTBP3 WILD-TYPE    120    101     83    119    109
D510V6, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LTBP3 MUTATED        4     12      6
  LTBP3 WILD-TYPE    155    239    159
D510V7, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LTBP3 MUTATED        1      7      9      1      4
  LTBP3 WILD-TYPE    117    124    142     93     77
D510V8, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             1              93
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LTBP3 MUTATED        2      6      4      0      4
  LTBP3 WILD-TYPE    116    130    111     40     67
D510V9, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             4             111
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LTBP3 MUTATED        0      5      8      2      1
  LTBP3 WILD-TYPE     48    104    122     99     91
D510V10, multiclass
        clus
vv       LTBP3 MUTATED LTBP3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             8             122
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(511) Variable = GALNTL1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GALNTL1 MUTATED        2      1      1      9
  GALNTL1 WILD-TYPE    133     91    171    167
D511V1, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GALNTL1 MUTATED        4      2      6
  GALNTL1 WILD-TYPE    211    153    156
D511V2, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               6               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GALNTL1 MUTATED        5      5      2      0
  GALNTL1 WILD-TYPE    130    119    123     60
D511V3, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               5               119
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GALNTL1 MUTATED        8      1      3
  GALNTL1 WILD-TYPE    245    101     86
D511V4, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               1               101
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GALNTL1 MUTATED        2      5      4
  GALNTL1 WILD-TYPE    162    242    139
D511V5, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               5               242
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALNTL1 MUTATED        4      1      2      0      4
  GALNTL1 WILD-TYPE    117    103     89    121    113
D511V6, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               4               117
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GALNTL1 MUTATED        1      8      4
  GALNTL1 WILD-TYPE    158    243    161
D511V7, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               8               243
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALNTL1 MUTATED        2      4      4      0      3
  GALNTL1 WILD-TYPE    116    127    147     94     78
D511V8, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALNTL1 MUTATED        1      3      2      2      3
  GALNTL1 WILD-TYPE    117    133    113     38     68
D511V9, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               2               113
  CLUS_4               2                38
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALNTL1 MUTATED        0      2      5      4      0
  GALNTL1 WILD-TYPE     48    107    125     97     92
D511V10, multiclass
        clus
vv       GALNTL1 MUTATED GALNTL1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               5               125
  CLUS_4               4                97
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(512) Variable = RGS12 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS12 MUTATED       10      2      4     22
  RGS12 WILD-TYPE    125     90    168    154
D512V1, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             2              90
  CLUS_3             4             168
  CLUS_4            22             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS12 MUTATED       22      5      5
  RGS12 WILD-TYPE    193    150    157
D512V2, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1            22             193
  CLUS_2             5             150
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS12 MUTATED       12      8      5      8
  RGS12 WILD-TYPE    123    116    120     52
D512V3, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1            12             123
  CLUS_2             8             116
  CLUS_3             5             120
  CLUS_4             8              52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS12 MUTATED       24      5      4
  RGS12 WILD-TYPE    229     97     85
D512V4, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1            24             229
  CLUS_2             5              97
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS12 MUTATED        7     23      7
  RGS12 WILD-TYPE    157    224    136
D512V5, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            23             224
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS12 MUTATED        5      8     13      5      6
  RGS12 WILD-TYPE    116     96     78    116    111
D512V6, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             8              96
  CLUS_3            13              78
  CLUS_4             5             116
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS12 MUTATED        3     23     12
  RGS12 WILD-TYPE    156    228    153
D512V7, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            23             228
  CLUS_3            12             153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS12 MUTATED        5     16     12      2      3
  RGS12 WILD-TYPE    113    115    139     92     78
D512V8, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            16             115
  CLUS_3            12             139
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS12 MUTATED        1     13      6      2      7
  RGS12 WILD-TYPE    117    123    109     38     64
D512V9, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            13             123
  CLUS_3             6             109
  CLUS_4             2              38
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS12 MUTATED        2     10     10      5      2
  RGS12 WILD-TYPE     46     99    120     96     90
D512V10, multiclass
        clus
vv       RGS12 MUTATED RGS12 WILD-TYPE
  CLUS_1             2              46
  CLUS_2            10              99
  CLUS_3            10             120
  CLUS_4             5              96
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(513) Variable = PLA2G15 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLA2G15 MUTATED        0      1      2     10
  PLA2G15 WILD-TYPE    135     91    170    166
D513V1, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4              10               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G15 MUTATED        5      3      2
  PLA2G15 WILD-TYPE    210    152    160
D513V2, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLA2G15 MUTATED        4      4      0      2
  PLA2G15 WILD-TYPE    131    120    125     58
D513V3, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G15 MUTATED        8      2      0
  PLA2G15 WILD-TYPE    245    100     89
D513V4, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G15 MUTATED        4      6      1
  PLA2G15 WILD-TYPE    160    241    142
D513V5, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G15 MUTATED        1      4      3      2      1
  PLA2G15 WILD-TYPE    120    100     88    119    116
D513V6, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               4               100
  CLUS_3               3                88
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLA2G15 MUTATED        3      8      2
  PLA2G15 WILD-TYPE    156    243    163
D513V7, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               8               243
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G15 MUTATED        2      4      4      2      1
  PLA2G15 WILD-TYPE    116    127    147     92     80
D513V8, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G15 MUTATED        3      1      2      0      3
  PLA2G15 WILD-TYPE    115    135    113     40     68
D513V9, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               1               135
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G15 MUTATED        1      2      3      1      2
  PLA2G15 WILD-TYPE     47    107    127    100     90
D513V10, multiclass
        clus
vv       PLA2G15 MUTATED PLA2G15 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(514) Variable = SPTA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTA1 MUTATED       22     14     24     34
  SPTA1 WILD-TYPE    113     78    148    142
D514V1, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            22             113
  CLUS_2            14              78
  CLUS_3            24             148
  CLUS_4            34             142
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPTA1 MUTATED       46     19     19
  SPTA1 WILD-TYPE    169    136    143
D514V2, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            46             169
  CLUS_2            19             136
  CLUS_3            19             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTA1 MUTATED       27     18     18     10
  SPTA1 WILD-TYPE    108    106    107     50
D514V3, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            27             108
  CLUS_2            18             106
  CLUS_3            18             107
  CLUS_4            10              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPTA1 MUTATED       44     12     17
  SPTA1 WILD-TYPE    209     90     72
D514V4, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            44             209
  CLUS_2            12              90
  CLUS_3            17              72
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPTA1 MUTATED       15     56     21
  SPTA1 WILD-TYPE    149    191    122
D514V5, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            15             149
  CLUS_2            56             191
  CLUS_3            21             122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTA1 MUTATED       22     23     20     10     17
  SPTA1 WILD-TYPE     99     81     71    111    100
D514V6, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            22              99
  CLUS_2            23              81
  CLUS_3            20              71
  CLUS_4            10             111
  CLUS_5            17             100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SPTA1 MUTATED       21     46     26
  SPTA1 WILD-TYPE    138    205    139
D514V7, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            21             138
  CLUS_2            46             205
  CLUS_3            26             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTA1 MUTATED       23     29     22      7     12
  SPTA1 WILD-TYPE     95    102    129     87     69
D514V8, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            23              95
  CLUS_2            29             102
  CLUS_3            22             129
  CLUS_4             7              87
  CLUS_5            12              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTA1 MUTATED       12     24     20      8     11
  SPTA1 WILD-TYPE    106    112     95     32     60
D514V9, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1            12             106
  CLUS_2            24             112
  CLUS_3            20              95
  CLUS_4             8              32
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTA1 MUTATED        7     23     19     19      7
  SPTA1 WILD-TYPE     41     86    111     82     85
D514V10, multiclass
        clus
vv       SPTA1 MUTATED SPTA1 WILD-TYPE
  CLUS_1             7              41
  CLUS_2            23              86
  CLUS_3            19             111
  CLUS_4            19              82
  CLUS_5             7              85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(515) Variable = ZNF292 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED        6      4      5     24
  ZNF292 WILD-TYPE    129     88    167    152
D515V1, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4               88
  CLUS_3              5              167
  CLUS_4             24              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED       19      9      7
  ZNF292 WILD-TYPE    196    146    155
D515V2, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1             19              196
  CLUS_2              9              146
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF292 MUTATED       14     13      6      2
  ZNF292 WILD-TYPE    121    111    119     58
D515V3, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1             14              121
  CLUS_2             13              111
  CLUS_3              6              119
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED       24      7      4
  ZNF292 WILD-TYPE    229     95     85
D515V4, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1             24              229
  CLUS_2              7               95
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        9     23      7
  ZNF292 WILD-TYPE    155    224    136
D515V5, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              9              155
  CLUS_2             23              224
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF292 MUTATED        4      7     14      7      7
  ZNF292 WILD-TYPE    117     97     77    114    110
D515V6, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              7               97
  CLUS_3             14               77
  CLUS_4              7              114
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF292 MUTATED        8     25      7
  ZNF292 WILD-TYPE    151    226    158
D515V7, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              8              151
  CLUS_2             25              226
  CLUS_3              7              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF292 MUTATED        3     12     14      7      4
  ZNF292 WILD-TYPE    115    119    137     87     77
D515V8, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             12              119
  CLUS_3             14              137
  CLUS_4              7               87
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF292 MUTATED        8     10      5      3      6
  ZNF292 WILD-TYPE    110    126    110     37     65
D515V9, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              8              110
  CLUS_2             10              126
  CLUS_3              5              110
  CLUS_4              3               37
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF292 MUTATED        2      8     13      2      7
  ZNF292 WILD-TYPE     46    101    117     99     85
D515V10, multiclass
        clus
vv       ZNF292 MUTATED ZNF292 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              8              101
  CLUS_3             13              117
  CLUS_4              2               99
  CLUS_5              7               85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(516) Variable = ART5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ART5 MUTATED        2      0      0      4
  ART5 WILD-TYPE    133     92    172    172
D516V1, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART5 MUTATED        5      0      0
  ART5 WILD-TYPE    210    155    162
D516V2, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ART5 MUTATED        2      3      0      0
  ART5 WILD-TYPE    133    121    125     60
D516V3, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART5 MUTATED        1      3      1
  ART5 WILD-TYPE    252     99     88
D516V4, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART5 MUTATED        1      3      2
  ART5 WILD-TYPE    163    244    141
D516V5, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART5 MUTATED        1      2      1      0      2
  ART5 WILD-TYPE    120    102     90    121    115
D516V6, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            1             90
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ART5 MUTATED        2      3      1
  ART5 WILD-TYPE    157    248    164
D516V7, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            3            248
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART5 MUTATED        2      1      3      0      0
  ART5 WILD-TYPE    116    130    148     94     81
D516V8, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            130
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART5 MUTATED        0      3      1      0      1
  ART5 WILD-TYPE    118    133    114     40     70
D516V9, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ART5 MUTATED        1      1      3      0      0
  ART5 WILD-TYPE     47    108    127    101     92
D516V10, multiclass
        clus
vv       ART5 MUTATED ART5 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(517) Variable = CCDC80 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC80 MUTATED        1      3      3     15
  CCDC80 WILD-TYPE    134     89    169    161
D517V1, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC80 MUTATED       16      1      3
  CCDC80 WILD-TYPE    199    154    159
D517V2, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1             16              199
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC80 MUTATED        8      6      2      1
  CCDC80 WILD-TYPE    127    118    123     59
D517V3, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              6              118
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC80 MUTATED       10      4      3
  CCDC80 WILD-TYPE    243     98     86
D517V4, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC80 MUTATED        3     14      5
  CCDC80 WILD-TYPE    161    233    138
D517V5, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             14              233
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC80 MUTATED        2      5      9      2      4
  CCDC80 WILD-TYPE    119     99     82    119    113
D517V6, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              5               99
  CLUS_3              9               82
  CLUS_4              2              119
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC80 MUTATED        2     17      4
  CCDC80 WILD-TYPE    157    234    161
D517V7, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             17              234
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC80 MUTATED        2     12      6      1      2
  CCDC80 WILD-TYPE    116    119    145     93     79
D517V8, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             12              119
  CLUS_3              6              145
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC80 MUTATED        1      7      2      2      5
  CCDC80 WILD-TYPE    117    129    113     38     66
D517V9, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              129
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC80 MUTATED        2      8      5      1      1
  CCDC80 WILD-TYPE     46    101    125    100     91
D517V10, multiclass
        clus
vv       CCDC80 MUTATED CCDC80 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              8              101
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(518) Variable = ACAT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACAT1 MUTATED        1      1      2      5
  ACAT1 WILD-TYPE    134     91    170    171
D518V1, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAT1 MUTATED        5      2      1
  ACAT1 WILD-TYPE    210    153    161
D518V2, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACAT1 MUTATED        1      3      1      1
  ACAT1 WILD-TYPE    134    121    124     59
D518V3, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAT1 MUTATED        3      2      1
  ACAT1 WILD-TYPE    250    100     88
D518V4, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAT1 MUTATED        2      3      3
  ACAT1 WILD-TYPE    162    244    140
D518V5, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAT1 MUTATED        0      1      2      2      3
  ACAT1 WILD-TYPE    121    103     89    119    114
D518V6, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAT1 MUTATED        2      5      2
  ACAT1 WILD-TYPE    157    246    163
D518V7, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAT1 MUTATED        0      2      3      2      2
  ACAT1 WILD-TYPE    118    129    148     92     79
D518V8, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAT1 MUTATED        2      2      1      0      3
  ACAT1 WILD-TYPE    116    134    114     40     68
D518V9, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAT1 MUTATED        0      2      3      1      2
  ACAT1 WILD-TYPE     48    107    127    100     90
D518V10, multiclass
        clus
vv       ACAT1 MUTATED ACAT1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(519) Variable = ZCRB1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCRB1 MUTATED        0      1      0      6
  ZCRB1 WILD-TYPE    135     91    172    170
D519V1, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZCRB1 MUTATED        6      0      0
  ZCRB1 WILD-TYPE    209    155    162
D519V2, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCRB1 MUTATED        3      1      1      0
  ZCRB1 WILD-TYPE    132    123    124     60
D519V3, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZCRB1 MUTATED        3      1      1
  ZCRB1 WILD-TYPE    250    101     88
D519V4, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZCRB1 MUTATED        0      5      2
  ZCRB1 WILD-TYPE    164    242    141
D519V5, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCRB1 MUTATED        0      1      5      0      1
  ZCRB1 WILD-TYPE    121    103     86    121    116
D519V6, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZCRB1 MUTATED        0      5      2
  ZCRB1 WILD-TYPE    159    246    163
D519V7, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCRB1 MUTATED        0      4      2      0      1
  ZCRB1 WILD-TYPE    118    127    149     94     80
D519V8, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCRB1 MUTATED        0      2      2      0      0
  ZCRB1 WILD-TYPE    118    134    113     40     71
D519V9, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCRB1 MUTATED        0      2      2      0      0
  ZCRB1 WILD-TYPE     48    107    128    101     92
D519V10, multiclass
        clus
vv       ZCRB1 MUTATED ZCRB1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(520) Variable = PLA2G7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLA2G7 MUTATED        1      1      0      6
  PLA2G7 WILD-TYPE    134     91    172    170
D520V1, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLA2G7 MUTATED        3      1      2
  PLA2G7 WILD-TYPE    212    154    160
D520V2, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLA2G7 MUTATED        3      4      0      0
  PLA2G7 WILD-TYPE    132    120    125     60
D520V3, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLA2G7 MUTATED        5      1      1
  PLA2G7 WILD-TYPE    248    101     88
D520V4, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLA2G7 MUTATED        2      4      2
  PLA2G7 WILD-TYPE    162    243    141
D520V5, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G7 MUTATED        0      1      4      1      2
  PLA2G7 WILD-TYPE    121    103     87    120    115
D520V6, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLA2G7 MUTATED        1      5      1
  PLA2G7 WILD-TYPE    158    246    164
D520V7, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G7 MUTATED        0      3      2      1      1
  PLA2G7 WILD-TYPE    118    128    149     93     80
D520V8, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G7 MUTATED        1      1      1      1      1
  PLA2G7 WILD-TYPE    117    135    114     39     70
D520V9, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLA2G7 MUTATED        1      1      1      1      1
  PLA2G7 WILD-TYPE     47    108    129    100     91
D520V10, multiclass
        clus
vv       PLA2G7 MUTATED PLA2G7 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              1              129
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(521) Variable = FBN3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED        5      2     10     26
  FBN3 WILD-TYPE    130     90    162    150
D521V1, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            2             90
  CLUS_3           10            162
  CLUS_4           26            150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED       26      6      5
  FBN3 WILD-TYPE    189    149    157
D521V2, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1           26            189
  CLUS_2            6            149
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBN3 MUTATED       14     12      3      6
  FBN3 WILD-TYPE    121    112    122     54
D521V3, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1           14            121
  CLUS_2           12            112
  CLUS_3            3            122
  CLUS_4            6             54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED       27      5      3
  FBN3 WILD-TYPE    226     97     86
D521V4, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1           27            226
  CLUS_2            5             97
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        8     24     10
  FBN3 WILD-TYPE    156    223    133
D521V5, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            8            156
  CLUS_2           24            223
  CLUS_3           10            133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBN3 MUTATED        5      6     21      5      5
  FBN3 WILD-TYPE    116     98     70    116    112
D521V6, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            5            116
  CLUS_2            6             98
  CLUS_3           21             70
  CLUS_4            5            116
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FBN3 MUTATED        8     31      4
  FBN3 WILD-TYPE    151    220    161
D521V7, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            8            151
  CLUS_2           31            220
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBN3 MUTATED        4     21     12      4      2
  FBN3 WILD-TYPE    114    110    139     90     79
D521V8, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            4            114
  CLUS_2           21            110
  CLUS_3           12            139
  CLUS_4            4             90
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBN3 MUTATED        6      9      4      3     10
  FBN3 WILD-TYPE    112    127    111     37     61
D521V9, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            6            112
  CLUS_2            9            127
  CLUS_3            4            111
  CLUS_4            3             37
  CLUS_5           10             61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBN3 MUTATED        1     12     14      1      4
  FBN3 WILD-TYPE     47     97    116    100     88
D521V10, multiclass
        clus
vv       FBN3 MUTATED FBN3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2           12             97
  CLUS_3           14            116
  CLUS_4            1            100
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(522) Variable = CA2 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CA2 MUTATED        1      1      0      5
  CA2 WILD-TYPE    134     91    172    171
D522V1, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           1           134
  CLUS_2           1            91
  CLUS_3           0           172
  CLUS_4           5           171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CA2 MUTATED        6      1      0
  CA2 WILD-TYPE    209    154    162
D522V2, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           6           209
  CLUS_2           1           154
  CLUS_3           0           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CA2 MUTATED        5      1      1      0
  CA2 WILD-TYPE    130    123    124     60
D522V3, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           5           130
  CLUS_2           1           123
  CLUS_3           1           124
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CA2 MUTATED        6      0      1
  CA2 WILD-TYPE    247    102     88
D522V4, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           6           247
  CLUS_2           0           102
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CA2 MUTATED        1      5      1
  CA2 WILD-TYPE    163    242    142
D522V5, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           1           163
  CLUS_2           5           242
  CLUS_3           1           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CA2 MUTATED        0      1      5      0      1
  CA2 WILD-TYPE    121    103     86    121    116
D522V6, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           0           121
  CLUS_2           1           103
  CLUS_3           5            86
  CLUS_4           0           121
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CA2 MUTATED        1      5      1
  CA2 WILD-TYPE    158    246    164
D522V7, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           1           158
  CLUS_2           5           246
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CA2 MUTATED        0      4      2      0      1
  CA2 WILD-TYPE    118    127    149     94     80
D522V8, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           0           118
  CLUS_2           4           127
  CLUS_3           2           149
  CLUS_4           0            94
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CA2 MUTATED        0      3      1      1      2
  CA2 WILD-TYPE    118    133    114     39     69
D522V9, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           0           118
  CLUS_2           3           133
  CLUS_3           1           114
  CLUS_4           1            39
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CA2 MUTATED        0      5      1      1      0
  CA2 WILD-TYPE     48    104    129    100     92
D522V10, multiclass
        clus
vv       CA2 MUTATED CA2 WILD-TYPE
  CLUS_1           0            48
  CLUS_2           5           104
  CLUS_3           1           129
  CLUS_4           1           100
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(523) Variable = GTF3C4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GTF3C4 MUTATED        0      0      1     13
  GTF3C4 WILD-TYPE    135     92    171    163
D523V1, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C4 MUTATED        8      0      4
  GTF3C4 WILD-TYPE    207    155    158
D523V2, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GTF3C4 MUTATED        4      7      1      0
  GTF3C4 WILD-TYPE    131    117    124     60
D523V3, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C4 MUTATED        6      5      1
  GTF3C4 WILD-TYPE    247     97     88
D523V4, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C4 MUTATED        2      8      3
  GTF3C4 WILD-TYPE    162    239    140
D523V5, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              8              239
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C4 MUTATED        1      2      7      0      3
  GTF3C4 WILD-TYPE    120    102     84    121    114
D523V6, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              7               84
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C4 MUTATED        1      8      5
  GTF3C4 WILD-TYPE    158    243    160
D523V7, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C4 MUTATED        0      6      6      0      2
  GTF3C4 WILD-TYPE    118    125    145     94     79
D523V8, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              125
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C4 MUTATED        1      4      1      1      4
  GTF3C4 WILD-TYPE    117    132    114     39     67
D523V9, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C4 MUTATED        0      5      5      1      0
  GTF3C4 WILD-TYPE     48    104    125    100     92
D523V10, multiclass
        clus
vv       GTF3C4 MUTATED GTF3C4 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(524) Variable = TERF1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TERF1 MUTATED        2      1      1      6
  TERF1 WILD-TYPE    133     91    171    170
D524V1, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TERF1 MUTATED        6      1      1
  TERF1 WILD-TYPE    209    154    161
D524V2, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TERF1 MUTATED        1      6      1      0
  TERF1 WILD-TYPE    134    118    124     60
D524V3, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TERF1 MUTATED        5      2      1
  TERF1 WILD-TYPE    248    100     88
D524V4, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TERF1 MUTATED        1      5      2
  TERF1 WILD-TYPE    163    242    141
D524V5, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TERF1 MUTATED        2      1      4      0      1
  TERF1 WILD-TYPE    119    103     87    121    116
D524V6, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TERF1 MUTATED        3      6      1
  TERF1 WILD-TYPE    156    245    164
D524V7, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TERF1 MUTATED        3      4      2      0      1
  TERF1 WILD-TYPE    115    127    149     94     80
D524V8, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TERF1 MUTATED        1      3      2      0      1
  TERF1 WILD-TYPE    117    133    113     40     70
D524V9, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TERF1 MUTATED        1      2      3      1      0
  TERF1 WILD-TYPE     47    107    127    100     92
D524V10, multiclass
        clus
vv       TERF1 MUTATED TERF1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(525) Variable = PLEKHO1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLEKHO1 MUTATED        0      0      1      7
  PLEKHO1 WILD-TYPE    135     92    171    169
D525V1, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHO1 MUTATED        4      0      2
  PLEKHO1 WILD-TYPE    211    155    160
D525V2, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLEKHO1 MUTATED        4      3      1      0
  PLEKHO1 WILD-TYPE    131    121    124     60
D525V3, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHO1 MUTATED        4      2      2
  PLEKHO1 WILD-TYPE    249    100     87
D525V4, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               2               100
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHO1 MUTATED        2      4      2
  PLEKHO1 WILD-TYPE    162    243    141
D525V5, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHO1 MUTATED        0      2      2      1      3
  PLEKHO1 WILD-TYPE    121    102     89    120    114
D525V6, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PLEKHO1 MUTATED        0      5      3
  PLEKHO1 WILD-TYPE    159    246    162
D525V7, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               5               246
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHO1 MUTATED        0      3      5      0      0
  PLEKHO1 WILD-TYPE    118    128    146     94     81
D525V8, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHO1 MUTATED        0      1      0      1      4
  PLEKHO1 WILD-TYPE    118    135    115     39     67
D525V9, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLEKHO1 MUTATED        1      1      4      0      0
  PLEKHO1 WILD-TYPE     47    108    126    101     92
D525V10, multiclass
        clus
vv       PLEKHO1 MUTATED PLEKHO1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               4               126
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(526) Variable = FAM109B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM109B MUTATED        0      2      0      6
  FAM109B WILD-TYPE    135     90    172    170
D526V1, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM109B MUTATED        5      1      1
  FAM109B WILD-TYPE    210    154    161
D526V2, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               5               210
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM109B MUTATED        1      2      1      0
  FAM109B WILD-TYPE    134    122    124     60
D526V3, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM109B MUTATED        1      1      2
  FAM109B WILD-TYPE    252    101     87
D526V4, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               1               252
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM109B MUTATED        0      6      2
  FAM109B WILD-TYPE    164    241    141
D526V5, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               0               164
  CLUS_2               6               241
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM109B MUTATED        0      3      3      0      2
  FAM109B WILD-TYPE    121    101     88    121    115
D526V6, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               0               121
  CLUS_2               3               101
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM109B MUTATED        1      6      1
  FAM109B WILD-TYPE    158    245    164
D526V7, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               1               158
  CLUS_2               6               245
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM109B MUTATED        1      4      3      0      0
  FAM109B WILD-TYPE    117    127    148     94     81
D526V8, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM109B MUTATED        1      4      0      0      2
  FAM109B WILD-TYPE    117    132    115     40     69
D526V9, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               132
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM109B MUTATED        0      5      2      0      0
  FAM109B WILD-TYPE     48    104    128    101     92
D526V10, multiclass
        clus
vv       FAM109B MUTATED FAM109B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(527) Variable = DNAH7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAH7 MUTATED       11     12     16     30
  DNAH7 WILD-TYPE    124     80    156    146
D527V1, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            12              80
  CLUS_3            16             156
  CLUS_4            30             146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH7 MUTATED       33     14     12
  DNAH7 WILD-TYPE    182    141    150
D527V2, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            33             182
  CLUS_2            14             141
  CLUS_3            12             150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAH7 MUTATED       21     17      8     10
  DNAH7 WILD-TYPE    114    107    117     50
D527V3, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            21             114
  CLUS_2            17             107
  CLUS_3             8             117
  CLUS_4            10              50
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH7 MUTATED       37     12      7
  DNAH7 WILD-TYPE    216     90     82
D527V4, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            37             216
  CLUS_2            12              90
  CLUS_3             7              82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH7 MUTATED       13     40     13
  DNAH7 WILD-TYPE    151    207    130
D527V5, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            13             151
  CLUS_2            40             207
  CLUS_3            13             130
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH7 MUTATED       10     16     21      9     10
  DNAH7 WILD-TYPE    111     88     70    112    107
D527V6, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            10             111
  CLUS_2            16              88
  CLUS_3            21              70
  CLUS_4             9             112
  CLUS_5            10             107
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DNAH7 MUTATED       13     43     13
  DNAH7 WILD-TYPE    146    208    152
D527V7, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            13             146
  CLUS_2            43             208
  CLUS_3            13             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH7 MUTATED       14     23     20      7      5
  DNAH7 WILD-TYPE    104    108    131     87     76
D527V8, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1            14             104
  CLUS_2            23             108
  CLUS_3            20             131
  CLUS_4             7              87
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH7 MUTATED        5     22      8      7     11
  DNAH7 WILD-TYPE    113    114    107     33     60
D527V9, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            22             114
  CLUS_3             8             107
  CLUS_4             7              33
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH7 MUTATED        3     23     14      7      6
  DNAH7 WILD-TYPE     45     86    116     94     86
D527V10, multiclass
        clus
vv       DNAH7 MUTATED DNAH7 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            23              86
  CLUS_3            14             116
  CLUS_4             7              94
  CLUS_5             6              86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(528) Variable = MAP7D3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP7D3 MUTATED        2      0      0     16
  MAP7D3 WILD-TYPE    133     92    172    160
D528V1, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D3 MUTATED        7      3      4
  MAP7D3 WILD-TYPE    208    152    158
D528V2, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              3              152
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP7D3 MUTATED        6      8      2      0
  MAP7D3 WILD-TYPE    129    116    123     60
D528V3, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              8              116
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D3 MUTATED       10      3      3
  MAP7D3 WILD-TYPE    243     99     86
D528V4, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              3               99
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D3 MUTATED        3      7      8
  MAP7D3 WILD-TYPE    161    240    135
D528V5, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              7              240
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D3 MUTATED        2      2     10      0      4
  MAP7D3 WILD-TYPE    119    102     81    121    113
D528V6, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3             10               81
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D3 MUTATED        1     12      5
  MAP7D3 WILD-TYPE    158    239    160
D528V7, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             12              239
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D3 MUTATED        2      5      9      0      2
  MAP7D3 WILD-TYPE    116    126    142     94     79
D528V8, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              126
  CLUS_3              9              142
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D3 MUTATED        0      5      3      1      3
  MAP7D3 WILD-TYPE    118    131    112     39     68
D528V9, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              131
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D3 MUTATED        3      3      4      2      0
  MAP7D3 WILD-TYPE     45    106    126     99     92
D528V10, multiclass
        clus
vv       MAP7D3 MUTATED MAP7D3 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(529) Variable = SFRS18 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SFRS18 MUTATED        1      1      3     15
  SFRS18 WILD-TYPE    134     91    169    161
D529V1, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SFRS18 MUTATED       14      1      1
  SFRS18 WILD-TYPE    201    154    161
D529V2, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SFRS18 MUTATED        7      8      0      0
  SFRS18 WILD-TYPE    128    116    125     60
D529V3, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SFRS18 MUTATED       11      4      0
  SFRS18 WILD-TYPE    242     98     89
D529V4, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SFRS18 MUTATED        5     12      2
  SFRS18 WILD-TYPE    159    235    141
D529V5, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              5              159
  CLUS_2             12              235
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SFRS18 MUTATED        3      2     11      1      2
  SFRS18 WILD-TYPE    118    102     80    120    115
D529V6, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              2              102
  CLUS_3             11               80
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SFRS18 MUTATED        2     17      1
  SFRS18 WILD-TYPE    157    234    164
D529V7, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             17              234
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SFRS18 MUTATED        1     13      6      0      0
  SFRS18 WILD-TYPE    117    118    145     94     81
D529V8, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              1              117
  CLUS_2             13              118
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SFRS18 MUTATED        2      6      1      1      3
  SFRS18 WILD-TYPE    116    130    114     39     68
D529V9, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SFRS18 MUTATED        3      6      4      0      0
  SFRS18 WILD-TYPE     45    103    126    101     92
D529V10, multiclass
        clus
vv       SFRS18 MUTATED SFRS18 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              6              103
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(530) Variable = PRPF4B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRPF4B MUTATED        2      0      0     10
  PRPF4B WILD-TYPE    133     92    172    166
D530V1, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRPF4B MUTATED        6      1      2
  PRPF4B WILD-TYPE    209    154    160
D530V2, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRPF4B MUTATED        6      4      1      0
  PRPF4B WILD-TYPE    129    120    124     60
D530V3, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRPF4B MUTATED        9      1      1
  PRPF4B WILD-TYPE    244    101     88
D530V4, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              9              244
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRPF4B MUTATED        2      6      3
  PRPF4B WILD-TYPE    162    241    140
D530V5, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2              162
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF4B MUTATED        2      1      7      0      1
  PRPF4B WILD-TYPE    119    103     84    121    116
D530V6, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2              119
  CLUS_2              1              103
  CLUS_3              7               84
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PRPF4B MUTATED        2      8      2
  PRPF4B WILD-TYPE    157    243    163
D530V7, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF4B MUTATED        2      3      6      0      1
  PRPF4B WILD-TYPE    116    128    145     94     80
D530V8, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              128
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF4B MUTATED        2      4      0      0      3
  PRPF4B WILD-TYPE    116    132    115     40     68
D530V9, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF4B MUTATED        2      3      3      1      0
  PRPF4B WILD-TYPE     46    106    127    100     92
D530V10, multiclass
        clus
vv       PRPF4B MUTATED PRPF4B WILD-TYPE
  CLUS_1              2               46
  CLUS_2              3              106
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(531) Variable = SP100 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SP100 MUTATED        4      2     10      8
  SP100 WILD-TYPE    131     90    162    168
D531V1, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2              90
  CLUS_3            10             162
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SP100 MUTATED       12      7      5
  SP100 WILD-TYPE    203    148    157
D531V2, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             7             148
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SP100 MUTATED        6      9      4      1
  SP100 WILD-TYPE    129    115    121     59
D531V3, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             9             115
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SP100 MUTATED       14      5      1
  SP100 WILD-TYPE    239     97     88
D531V4, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SP100 MUTATED        6     13      4
  SP100 WILD-TYPE    158    234    139
D531V5, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            13             234
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SP100 MUTATED        4      5      5      4      5
  SP100 WILD-TYPE    117     99     86    117    112
D531V6, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             5              86
  CLUS_4             4             117
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SP100 MUTATED        5     16      4
  SP100 WILD-TYPE    154    235    161
D531V7, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            16             235
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SP100 MUTATED        5      7      9      2      2
  SP100 WILD-TYPE    113    124    142     92     79
D531V8, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SP100 MUTATED        4      9      1      2      6
  SP100 WILD-TYPE    114    127    114     38     65
D531V9, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             127
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SP100 MUTATED        3      6      8      3      2
  SP100 WILD-TYPE     45    103    122     98     90
D531V10, multiclass
        clus
vv       SP100 MUTATED SP100 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             6             103
  CLUS_3             8             122
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(532) Variable = UHRF1BP1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UHRF1BP1 MUTATED        1      1      2     17
  UHRF1BP1 WILD-TYPE    134     91    170    159
D532V1, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4               17                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  UHRF1BP1 MUTATED       10      1      7
  UHRF1BP1 WILD-TYPE    205    154    155
D532V2, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1               10                205
  CLUS_2                1                154
  CLUS_3                7                155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UHRF1BP1 MUTATED        4     10      2      1
  UHRF1BP1 WILD-TYPE    131    114    123     59
D532V3, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                4                131
  CLUS_2               10                114
  CLUS_3                2                123
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  UHRF1BP1 MUTATED        8      7      2
  UHRF1BP1 WILD-TYPE    245     95     87
D532V4, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                8                245
  CLUS_2                7                 95
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  UHRF1BP1 MUTATED        4     11      4
  UHRF1BP1 WILD-TYPE    160    236    139
D532V5, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               11                236
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UHRF1BP1 MUTATED        4      5      4      1      5
  UHRF1BP1 WILD-TYPE    117     99     87    120    112
D532V6, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                4                117
  CLUS_2                5                 99
  CLUS_3                4                 87
  CLUS_4                1                120
  CLUS_5                5                112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  UHRF1BP1 MUTATED        4     12      5
  UHRF1BP1 WILD-TYPE    155    239    160
D532V7, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                4                155
  CLUS_2               12                239
  CLUS_3                5                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UHRF1BP1 MUTATED        1      6     11      1      2
  UHRF1BP1 WILD-TYPE    117    125    140     93     79
D532V8, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                6                125
  CLUS_3               11                140
  CLUS_4                1                 93
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UHRF1BP1 MUTATED        2      5      1      1      8
  UHRF1BP1 WILD-TYPE    116    131    114     39     63
D532V9, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                131
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                8                 63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UHRF1BP1 MUTATED        2      4      8      2      1
  UHRF1BP1 WILD-TYPE     46    105    122     99     91
D532V10, multiclass
        clus
vv       UHRF1BP1 MUTATED UHRF1BP1 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                4                105
  CLUS_3                8                122
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(533) Variable = MRGPRF MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRGPRF MUTATED        1      1      4      1
  MRGPRF WILD-TYPE    134     91    168    175
D533V1, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4              1              175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRGPRF MUTATED        5      2      0
  MRGPRF WILD-TYPE    210    153    162
D533V2, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              5              210
  CLUS_2              2              153
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRGPRF MUTATED        2      2      0      0
  MRGPRF WILD-TYPE    133    122    125     60
D533V3, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRGPRF MUTATED        3      1      0
  MRGPRF WILD-TYPE    250    101     89
D533V4, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              3              250
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRGPRF MUTATED        2      5      0
  MRGPRF WILD-TYPE    162    242    143
D533V5, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRGPRF MUTATED        1      1      3      2      0
  MRGPRF WILD-TYPE    120    103     88    119    117
D533V6, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              2              119
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRGPRF MUTATED        2      5      0
  MRGPRF WILD-TYPE    157    246    165
D533V7, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRGPRF MUTATED        0      5      0      2      0
  MRGPRF WILD-TYPE    118    126    151     92     81
D533V8, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              0              151
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRGPRF MUTATED        2      4      0      1      0
  MRGPRF WILD-TYPE    116    132    115     39     71
D533V9, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRGPRF MUTATED        0      5      0      0      2
  MRGPRF WILD-TYPE     48    104    130    101     90
D533V10, multiclass
        clus
vv       MRGPRF MUTATED MRGPRF WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              0              130
  CLUS_4              0              101
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(534) Variable = ELL2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ELL2 MUTATED        2      3      0     12
  ELL2 WILD-TYPE    133     89    172    164
D534V1, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3             89
  CLUS_3            0            172
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELL2 MUTATED        8      0      6
  ELL2 WILD-TYPE    207    155    156
D534V2, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            0            155
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ELL2 MUTATED        7      6      2      2
  ELL2 WILD-TYPE    128    118    123     58
D534V3, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELL2 MUTATED       10      5      2
  ELL2 WILD-TYPE    243     97     87
D534V4, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            5             97
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELL2 MUTATED        3      8      6
  ELL2 WILD-TYPE    161    239    137
D534V5, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            8            239
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELL2 MUTATED        2      5      4      0      6
  ELL2 WILD-TYPE    119     99     87    121    111
D534V6, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            5             99
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ELL2 MUTATED        2      9      6
  ELL2 WILD-TYPE    157    242    159
D534V7, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELL2 MUTATED        2      3      9      0      3
  ELL2 WILD-TYPE    116    128    142     94     78
D534V8, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            9            142
  CLUS_4            0             94
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELL2 MUTATED        1      5      4      0      4
  ELL2 WILD-TYPE    117    131    111     40     67
D534V9, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            4            111
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ELL2 MUTATED        1      4      7      2      0
  ELL2 WILD-TYPE     47    105    123     99     92
D534V10, multiclass
        clus
vv       ELL2 MUTATED ELL2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            7            123
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(535) Variable = PCGF3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCGF3 MUTATED        1      0      0      6
  PCGF3 WILD-TYPE    134     92    172    170
D535V1, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCGF3 MUTATED        7      0      0
  PCGF3 WILD-TYPE    208    155    162
D535V2, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCGF3 MUTATED        4      2      0      0
  PCGF3 WILD-TYPE    131    122    125     60
D535V3, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCGF3 MUTATED        5      1      0
  PCGF3 WILD-TYPE    248    101     89
D535V4, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCGF3 MUTATED        0      7      0
  PCGF3 WILD-TYPE    164    240    143
D535V5, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             7             240
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCGF3 MUTATED        0      1      6      0      0
  PCGF3 WILD-TYPE    121    103     85    121    117
D535V6, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCGF3 MUTATED        0      7      0
  PCGF3 WILD-TYPE    159    244    165
D535V7, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCGF3 MUTATED        0      4      2      0      1
  PCGF3 WILD-TYPE    118    127    149     94     80
D535V8, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCGF3 MUTATED        0      3      0      2      2
  PCGF3 WILD-TYPE    118    133    115     38     69
D535V9, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCGF3 MUTATED        0      4      3      0      0
  PCGF3 WILD-TYPE     48    105    127    101     92
D535V10, multiclass
        clus
vv       PCGF3 MUTATED PCGF3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(536) Variable = RSF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RSF1 MUTATED        2      2      1     11
  RSF1 WILD-TYPE    133     90    171    165
D536V1, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RSF1 MUTATED        6      2      3
  RSF1 WILD-TYPE    209    153    159
D536V2, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RSF1 MUTATED        7      6      2      0
  RSF1 WILD-TYPE    128    118    123     60
D536V3, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RSF1 MUTATED        9      5      1
  RSF1 WILD-TYPE    244     97     88
D536V4, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RSF1 MUTATED        2      9      4
  RSF1 WILD-TYPE    162    238    139
D536V5, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            9            238
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSF1 MUTATED        2      6      5      0      2
  RSF1 WILD-TYPE    119     98     86    121    115
D536V6, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            6             98
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RSF1 MUTATED        1     13      2
  RSF1 WILD-TYPE    158    238    163
D536V7, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           13            238
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSF1 MUTATED        1      5      8      0      2
  RSF1 WILD-TYPE    117    126    143     94     79
D536V8, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            8            143
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSF1 MUTATED        0      4      0      1      3
  RSF1 WILD-TYPE    118    132    115     39     68
D536V9, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSF1 MUTATED        1      3      4      0      0
  RSF1 WILD-TYPE     47    106    126    101     92
D536V10, multiclass
        clus
vv       RSF1 MUTATED RSF1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(537) Variable = ARID1B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1B MUTATED        2      4      8     22
  ARID1B WILD-TYPE    133     88    164    154
D537V1, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              8              164
  CLUS_4             22              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1B MUTATED       15      8      5
  ARID1B WILD-TYPE    200    147    157
D537V2, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1             15              200
  CLUS_2              8              147
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID1B MUTATED        9     16      3      2
  ARID1B WILD-TYPE    126    108    122     58
D537V3, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              9              126
  CLUS_2             16              108
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1B MUTATED       18     10      2
  ARID1B WILD-TYPE    235     92     87
D537V4, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1             18              235
  CLUS_2             10               92
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1B MUTATED        8     18      8
  ARID1B WILD-TYPE    156    229    135
D537V5, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              8              156
  CLUS_2             18              229
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1B MUTATED        4      6     11      5      8
  ARID1B WILD-TYPE    117     98     80    116    109
D537V6, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              4              117
  CLUS_2              6               98
  CLUS_3             11               80
  CLUS_4              5              116
  CLUS_5              8              109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID1B MUTATED        8     21      8
  ARID1B WILD-TYPE    151    230    157
D537V7, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              8              151
  CLUS_2             21              230
  CLUS_3              8              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1B MUTATED        4     10     16      5      2
  ARID1B WILD-TYPE    114    121    135     89     79
D537V8, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              4              114
  CLUS_2             10              121
  CLUS_3             16              135
  CLUS_4              5               89
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1B MUTATED        6     12      1      1      5
  ARID1B WILD-TYPE    112    124    114     39     66
D537V9, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              6              112
  CLUS_2             12              124
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID1B MUTATED        1     12      6      1      5
  ARID1B WILD-TYPE     47     97    124    100     87
D537V10, multiclass
        clus
vv       ARID1B MUTATED ARID1B WILD-TYPE
  CLUS_1              1               47
  CLUS_2             12               97
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              5               87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(538) Variable = TNK2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNK2 MUTATED        2      1      3     16
  TNK2 WILD-TYPE    133     91    169    160
D538V1, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TNK2 MUTATED       16      2      2
  TNK2 WILD-TYPE    199    153    160
D538V2, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1           16            199
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNK2 MUTATED        7      7      2      3
  TNK2 WILD-TYPE    128    117    123     57
D538V3, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TNK2 MUTATED       11      5      3
  TNK2 WILD-TYPE    242     97     86
D538V4, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            5             97
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TNK2 MUTATED        4     14      3
  TNK2 WILD-TYPE    160    233    140
D538V5, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           14            233
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNK2 MUTATED        4      6      9      1      1
  TNK2 WILD-TYPE    117     98     82    120    116
D538V6, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            6             98
  CLUS_3            9             82
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TNK2 MUTATED        5     13      4
  TNK2 WILD-TYPE    154    238    161
D538V7, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           13            238
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNK2 MUTATED        3      9      6      1      3
  TNK2 WILD-TYPE    115    122    145     93     78
D538V8, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            9            122
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNK2 MUTATED        2      6      3      2      4
  TNK2 WILD-TYPE    116    130    112     38     67
D538V9, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            130
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNK2 MUTATED        2      5      6      3      1
  TNK2 WILD-TYPE     46    104    124     98     91
D538V10, multiclass
        clus
vv       TNK2 MUTATED TNK2 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            5            104
  CLUS_3            6            124
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(539) Variable = ABCE1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCE1 MUTATED        1      0      0     11
  ABCE1 WILD-TYPE    134     92    172    165
D539V1, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCE1 MUTATED        6      2      1
  ABCE1 WILD-TYPE    209    153    161
D539V2, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCE1 MUTATED        3      6      1      0
  ABCE1 WILD-TYPE    132    118    124     60
D539V3, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCE1 MUTATED        5      4      1
  ABCE1 WILD-TYPE    248     98     88
D539V4, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCE1 MUTATED        2      6      4
  ABCE1 WILD-TYPE    162    241    139
D539V5, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCE1 MUTATED        0      3      6      0      3
  ABCE1 WILD-TYPE    121    101     85    121    114
D539V6, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCE1 MUTATED        1     10      1
  ABCE1 WILD-TYPE    158    241    164
D539V7, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCE1 MUTATED        1      4      6      0      1
  ABCE1 WILD-TYPE    117    127    145     94     80
D539V8, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCE1 MUTATED        0      6      0      0      2
  ABCE1 WILD-TYPE    118    130    115     40     69
D539V9, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCE1 MUTATED        0      5      3      0      0
  ABCE1 WILD-TYPE     48    104    127    101     92
D539V10, multiclass
        clus
vv       ABCE1 MUTATED ABCE1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(540) Variable = PNMT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PNMT MUTATED        1      2      1      7
  PNMT WILD-TYPE    134     90    171    169
D540V1, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PNMT MUTATED        6      0      3
  PNMT WILD-TYPE    209    155    159
D540V2, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            6            209
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PNMT MUTATED        3      4      2      1
  PNMT WILD-TYPE    132    120    123     59
D540V3, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4            120
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PNMT MUTATED        7      2      1
  PNMT WILD-TYPE    246    100     88
D540V4, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            7            246
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PNMT MUTATED        0      6      4
  PNMT WILD-TYPE    164    241    139
D540V5, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            0            164
  CLUS_2            6            241
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNMT MUTATED        1      3      4      0      2
  PNMT WILD-TYPE    120    101     87    121    115
D540V6, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PNMT MUTATED        0      8      3
  PNMT WILD-TYPE    159    243    162
D540V7, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNMT MUTATED        2      3      4      0      2
  PNMT WILD-TYPE    116    128    147     94     79
D540V8, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            4            147
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNMT MUTATED        0      2      1      1      3
  PNMT WILD-TYPE    118    134    114     39     68
D540V9, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNMT MUTATED        0      3      2      2      0
  PNMT WILD-TYPE     48    106    128     99     92
D540V10, multiclass
        clus
vv       PNMT MUTATED PNMT WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(541) Variable = C8ORF46 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C8ORF46 MUTATED        1      1      1      6
  C8ORF46 WILD-TYPE    134     91    171    170
D541V1, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF46 MUTATED        4      1      3
  C8ORF46 WILD-TYPE    211    154    159
D541V2, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C8ORF46 MUTATED        3      4      1      0
  C8ORF46 WILD-TYPE    132    120    124     60
D541V3, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF46 MUTATED        5      2      1
  C8ORF46 WILD-TYPE    248    100     88
D541V4, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF46 MUTATED        3      4      2
  C8ORF46 WILD-TYPE    161    243    141
D541V5, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF46 MUTATED        0      2      2      2      3
  C8ORF46 WILD-TYPE    121    102     89    119    114
D541V6, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               2               119
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF46 MUTATED        1      5      3
  C8ORF46 WILD-TYPE    158    246    162
D541V7, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               5               246
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF46 MUTATED        0      4      2      1      2
  C8ORF46 WILD-TYPE    118    127    149     93     79
D541V8, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               127
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF46 MUTATED        0      3      3      1      1
  C8ORF46 WILD-TYPE    118    133    112     39     70
D541V9, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF46 MUTATED        0      3      3      1      1
  C8ORF46 WILD-TYPE     48    106    127    100     91
D541V10, multiclass
        clus
vv       C8ORF46 MUTATED C8ORF46 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(542) Variable = NOX5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOX5 MUTATED        1      2      1     13
  NOX5 WILD-TYPE    134     90    171    163
D542V1, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOX5 MUTATED        9      2      3
  NOX5 WILD-TYPE    206    153    159
D542V2, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOX5 MUTATED        4      7      2      2
  NOX5 WILD-TYPE    131    117    123     58
D542V3, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOX5 MUTATED        9      4      2
  NOX5 WILD-TYPE    244     98     87
D542V4, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            4             98
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOX5 MUTATED        2      8      6
  NOX5 WILD-TYPE    162    239    137
D542V5, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOX5 MUTATED        1      4      7      0      4
  NOX5 WILD-TYPE    120    100     84    121    113
D542V6, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            4            100
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOX5 MUTATED        2     11      4
  NOX5 WILD-TYPE    157    240    161
D542V7, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           11            240
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOX5 MUTATED        3      8      5      0      1
  NOX5 WILD-TYPE    115    123    146     94     80
D542V8, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            8            123
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOX5 MUTATED        0      6      3      1      3
  NOX5 WILD-TYPE    118    130    112     39     68
D542V9, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOX5 MUTATED        2      6      2      3      0
  NOX5 WILD-TYPE     46    103    128     98     92
D542V10, multiclass
        clus
vv       NOX5 MUTATED NOX5 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3            2            128
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(543) Variable = SGK3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGK3 MUTATED        0      1      2      6
  SGK3 WILD-TYPE    135     91    170    170
D543V1, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SGK3 MUTATED        5      1      0
  SGK3 WILD-TYPE    210    154    162
D543V2, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SGK3 MUTATED        4      4      0      0
  SGK3 WILD-TYPE    131    120    125     60
D543V3, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SGK3 MUTATED        5      3      0
  SGK3 WILD-TYPE    248     99     89
D543V4, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SGK3 MUTATED        1      4      3
  SGK3 WILD-TYPE    163    243    140
D543V5, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            4            243
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGK3 MUTATED        0      0      6      1      1
  SGK3 WILD-TYPE    121    104     85    120    116
D543V6, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            6             85
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SGK3 MUTATED        0      6      3
  SGK3 WILD-TYPE    159    245    162
D543V7, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGK3 MUTATED        0      2      6      1      0
  SGK3 WILD-TYPE    118    129    145     93     81
D543V8, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGK3 MUTATED        0      1      2      0      2
  SGK3 WILD-TYPE    118    135    113     40     69
D543V9, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SGK3 MUTATED        0      1      3      0      1
  SGK3 WILD-TYPE     48    108    127    101     91
D543V10, multiclass
        clus
vv       SGK3 MUTATED SGK3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(544) Variable = ZFC3H1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFC3H1 MUTATED        3      4      4     11
  ZFC3H1 WILD-TYPE    132     88    168    165
D544V1, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4               88
  CLUS_3              4              168
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZFC3H1 MUTATED        9      7      2
  ZFC3H1 WILD-TYPE    206    148    160
D544V2, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              7              148
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFC3H1 MUTATED        8      3      5      3
  ZFC3H1 WILD-TYPE    127    121    120     57
D544V3, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              3              121
  CLUS_3              5              120
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZFC3H1 MUTATED       15      2      2
  ZFC3H1 WILD-TYPE    238    100     87
D544V4, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1             15              238
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZFC3H1 MUTATED        6     10      5
  ZFC3H1 WILD-TYPE    158    237    138
D544V5, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             10              237
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFC3H1 MUTATED        2      4      8      4      3
  ZFC3H1 WILD-TYPE    119    100     83    117    114
D544V6, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3              8               83
  CLUS_4              4              117
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZFC3H1 MUTATED        5     13      4
  ZFC3H1 WILD-TYPE    154    238    161
D544V7, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             13              238
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFC3H1 MUTATED        3      8      5      5      1
  ZFC3H1 WILD-TYPE    115    123    146     89     80
D544V8, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              5              146
  CLUS_4              5               89
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFC3H1 MUTATED        4      6      1      5      2
  ZFC3H1 WILD-TYPE    114    130    114     35     69
D544V9, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              5               35
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFC3H1 MUTATED        1      7      3      2      5
  ZFC3H1 WILD-TYPE     47    102    127     99     87
D544V10, multiclass
        clus
vv       ZFC3H1 MUTATED ZFC3H1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              7              102
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              5               87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(545) Variable = TAS2R42 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAS2R42 MUTATED        1      2      0      3
  TAS2R42 WILD-TYPE    134     90    172    173
D545V1, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R42 MUTATED        2      2      2
  TAS2R42 WILD-TYPE    213    153    160
D545V2, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAS2R42 MUTATED        1      2      1      0
  TAS2R42 WILD-TYPE    134    122    124     60
D545V3, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R42 MUTATED        1      1      2
  TAS2R42 WILD-TYPE    252    101     87
D545V4, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               1               252
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R42 MUTATED        0      3      3
  TAS2R42 WILD-TYPE    164    244    140
D545V5, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               3               244
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R42 MUTATED        0      2      2      0      2
  TAS2R42 WILD-TYPE    121    102     89    121    115
D545V6, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TAS2R42 MUTATED        1      4      1
  TAS2R42 WILD-TYPE    158    247    164
D545V7, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               4               247
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R42 MUTATED        3      0      2      0      1
  TAS2R42 WILD-TYPE    115    131    149     94     80
D545V8, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               0               131
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R42 MUTATED        1      2      1      0      1
  TAS2R42 WILD-TYPE    117    134    114     40     70
D545V9, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAS2R42 MUTATED        0      3      2      0      0
  TAS2R42 WILD-TYPE     48    106    128    101     92
D545V10, multiclass
        clus
vv       TAS2R42 MUTATED TAS2R42 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(546) Variable = CDKL3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKL3 MUTATED        0      0      1      7
  CDKL3 WILD-TYPE    135     92    171    169
D546V1, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDKL3 MUTATED        4      1      2
  CDKL3 WILD-TYPE    211    154    160
D546V2, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDKL3 MUTATED        1      5      1      1
  CDKL3 WILD-TYPE    134    119    124     59
D546V3, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDKL3 MUTATED        6      1      1
  CDKL3 WILD-TYPE    247    101     88
D546V4, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDKL3 MUTATED        2      3      2
  CDKL3 WILD-TYPE    162    244    141
D546V5, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKL3 MUTATED        0      0      2      1      4
  CDKL3 WILD-TYPE    121    104     89    120    113
D546V6, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDKL3 MUTATED        1      4      3
  CDKL3 WILD-TYPE    158    247    162
D546V7, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             4             247
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKL3 MUTATED        0      1      5      1      1
  CDKL3 WILD-TYPE    118    130    146     93     80
D546V8, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKL3 MUTATED        1      1      1      0      3
  CDKL3 WILD-TYPE    117    135    114     40     68
D546V9, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDKL3 MUTATED        0      1      4      0      1
  CDKL3 WILD-TYPE     48    108    126    101     91
D546V10, multiclass
        clus
vv       CDKL3 MUTATED CDKL3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(547) Variable = USP21 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP21 MUTATED        1      2      3      8
  USP21 WILD-TYPE    134     90    169    168
D547V1, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP21 MUTATED        7      2      2
  USP21 WILD-TYPE    208    153    160
D547V2, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP21 MUTATED        2      6      2      2
  USP21 WILD-TYPE    133    118    123     58
D547V3, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP21 MUTATED        4      6      2
  USP21 WILD-TYPE    249     96     87
D547V4, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP21 MUTATED        1      9      4
  USP21 WILD-TYPE    163    238    139
D547V5, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP21 MUTATED        3      1      7      1      2
  USP21 WILD-TYPE    118    103     84    120    115
D547V6, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP21 MUTATED        1     12      2
  USP21 WILD-TYPE    158    239    163
D547V7, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP21 MUTATED        2      6      5      1      1
  USP21 WILD-TYPE    116    125    146     93     80
D547V8, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP21 MUTATED        1      4      1      0      5
  USP21 WILD-TYPE    117    132    114     40     66
D547V9, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP21 MUTATED        0      6      4      0      1
  USP21 WILD-TYPE     48    103    126    101     91
D547V10, multiclass
        clus
vv       USP21 MUTATED USP21 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(548) Variable = SERPINB12 MUTATION ANALYSIS
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB12 MUTATED        2      3      1      3
  SERPINB12 WILD-TYPE    133     89    171    173
D548V1, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 2                 133
  CLUS_2                 3                  89
  CLUS_3                 1                 171
  CLUS_4                 3                 173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB12 MUTATED        3      4      0
  SERPINB12 WILD-TYPE    212    151    162
D548V2, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 3                 212
  CLUS_2                 4                 151
  CLUS_3                 0                 162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB12 MUTATED        2      2      0      0
  SERPINB12 WILD-TYPE    133    122    125     60
D548V3, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 2                 133
  CLUS_2                 2                 122
  CLUS_3                 0                 125
  CLUS_4                 0                  60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB12 MUTATED        4      0      0
  SERPINB12 WILD-TYPE    249    102     89
D548V4, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 4                 249
  CLUS_2                 0                 102
  CLUS_3                 0                  89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB12 MUTATED        2      6      1
  SERPINB12 WILD-TYPE    162    241    142
D548V5, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 2                 162
  CLUS_2                 6                 241
  CLUS_3                 1                 142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB12 MUTATED        0      3      4      2      0
  SERPINB12 WILD-TYPE    121    101     87    119    117
D548V6, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 0                 121
  CLUS_2                 3                 101
  CLUS_3                 4                  87
  CLUS_4                 2                 119
  CLUS_5                 0                 117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB12 MUTATED        3      6      0
  SERPINB12 WILD-TYPE    156    245    165
D548V7, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 3                 156
  CLUS_2                 6                 245
  CLUS_3                 0                 165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB12 MUTATED        2      4      1      2      0
  SERPINB12 WILD-TYPE    116    127    150     92     81
D548V8, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 2                 116
  CLUS_2                 4                 127
  CLUS_3                 1                 150
  CLUS_4                 2                  92
  CLUS_5                 0                  81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB12 MUTATED        3      4      0      0      0
  SERPINB12 WILD-TYPE    115    132    115     40     71
D548V9, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 3                 115
  CLUS_2                 4                 132
  CLUS_3                 0                 115
  CLUS_4                 0                  40
  CLUS_5                 0                  71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB12 MUTATED        0      4      1      0      2
  SERPINB12 WILD-TYPE     48    105    129    101     90
D548V10, multiclass
        clus
vv       SERPINB12 MUTATED SERPINB12 WILD-TYPE
  CLUS_1                 0                  48
  CLUS_2                 4                 105
  CLUS_3                 1                 129
  CLUS_4                 0                 101
  CLUS_5                 2                  90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(549) Variable = GCG MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GCG MUTATED        0      1      3      6
  GCG WILD-TYPE    135     91    169    170
D549V1, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           0           135
  CLUS_2           1            91
  CLUS_3           3           169
  CLUS_4           6           170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  GCG MUTATED        6      1      3
  GCG WILD-TYPE    209    154    159
D549V2, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           6           209
  CLUS_2           1           154
  CLUS_3           3           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GCG MUTATED        3      2      1      2
  GCG WILD-TYPE    132    122    124     58
D549V3, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           3           132
  CLUS_2           2           122
  CLUS_3           1           124
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  GCG MUTATED        6      2      0
  GCG WILD-TYPE    247    100     89
D549V4, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           6           247
  CLUS_2           2           100
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  GCG MUTATED        3      4      3
  GCG WILD-TYPE    161    243    140
D549V5, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           3           161
  CLUS_2           4           243
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCG MUTATED        0      1      3      3      3
  GCG WILD-TYPE    121    103     88    118    114
D549V6, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           0           121
  CLUS_2           1           103
  CLUS_3           3            88
  CLUS_4           3           118
  CLUS_5           3           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  GCG MUTATED        2      6      2
  GCG WILD-TYPE    157    245    163
D549V7, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           2           157
  CLUS_2           6           245
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCG MUTATED        0      5      2      2      1
  GCG WILD-TYPE    118    126    149     92     80
D549V8, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           0           118
  CLUS_2           5           126
  CLUS_3           2           149
  CLUS_4           2            92
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCG MUTATED        1      3      0      2      3
  GCG WILD-TYPE    117    133    115     38     68
D549V9, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           1           117
  CLUS_2           3           133
  CLUS_3           0           115
  CLUS_4           2            38
  CLUS_5           3            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GCG MUTATED        1      3      2      1      2
  GCG WILD-TYPE     47    106    128    100     90
D549V10, multiclass
        clus
vv       GCG MUTATED GCG WILD-TYPE
  CLUS_1           1            47
  CLUS_2           3           106
  CLUS_3           2           128
  CLUS_4           1           100
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(550) Variable = DYRK4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYRK4 MUTATED        0      2      2      7
  DYRK4 WILD-TYPE    135     90    170    169
D550V1, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DYRK4 MUTATED        7      2      0
  DYRK4 WILD-TYPE    208    153    162
D550V2, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYRK4 MUTATED        5      2      3      0
  DYRK4 WILD-TYPE    130    122    122     60
D550V3, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             2             122
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DYRK4 MUTATED        6      1      3
  DYRK4 WILD-TYPE    247    101     86
D550V4, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DYRK4 MUTATED        3      5      3
  DYRK4 WILD-TYPE    161    242    140
D550V5, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             5             242
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK4 MUTATED        0      2      5      2      2
  DYRK4 WILD-TYPE    121    102     86    119    115
D550V6, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DYRK4 MUTATED        4      6      1
  DYRK4 WILD-TYPE    155    245    164
D550V7, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK4 MUTATED        1      5      2      2      1
  DYRK4 WILD-TYPE    117    126    149     92     80
D550V8, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK4 MUTATED        2      4      0      1      1
  DYRK4 WILD-TYPE    116    132    115     39     70
D550V9, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK4 MUTATED        1      2      3      0      2
  DYRK4 WILD-TYPE     47    107    127    101     90
D550V10, multiclass
        clus
vv       DYRK4 MUTATED DYRK4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(551) Variable = LINGO4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LINGO4 MUTATED        1      0      2      8
  LINGO4 WILD-TYPE    134     92    170    168
D551V1, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LINGO4 MUTATED        6      0      4
  LINGO4 WILD-TYPE    209    155    158
D551V2, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LINGO4 MUTATED        2      5      3      0
  LINGO4 WILD-TYPE    133    119    122     60
D551V3, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              3              122
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LINGO4 MUTATED        3      3      4
  LINGO4 WILD-TYPE    250     99     85
D551V4, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              3               99
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LINGO4 MUTATED        0      6      5
  LINGO4 WILD-TYPE    164    241    138
D551V5, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              6              241
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LINGO4 MUTATED        3      1      4      0      3
  LINGO4 WILD-TYPE    118    103     87    121    114
D551V6, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LINGO4 MUTATED        1      8      3
  LINGO4 WILD-TYPE    158    243    162
D551V7, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LINGO4 MUTATED        1      3      6      0      2
  LINGO4 WILD-TYPE    117    128    145     94     79
D551V8, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LINGO4 MUTATED        0      4      2      0      2
  LINGO4 WILD-TYPE    118    132    113     40     69
D551V9, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LINGO4 MUTATED        0      2      5      1      0
  LINGO4 WILD-TYPE     48    107    125    100     92
D551V10, multiclass
        clus
vv       LINGO4 MUTATED LINGO4 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(552) Variable = ZDHHC7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC7 MUTATED        0      0      1      8
  ZDHHC7 WILD-TYPE    135     92    171    168
D552V1, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC7 MUTATED        6      1      1
  ZDHHC7 WILD-TYPE    209    154    161
D552V2, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZDHHC7 MUTATED        4      2      1      0
  ZDHHC7 WILD-TYPE    131    122    124     60
D552V3, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC7 MUTATED        5      1      1
  ZDHHC7 WILD-TYPE    248    101     88
D552V4, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC7 MUTATED        2      6      1
  ZDHHC7 WILD-TYPE    162    241    142
D552V5, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              6              241
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZDHHC7 MUTATED        0      3      4      1      1
  ZDHHC7 WILD-TYPE    121    101     87    120    116
D552V6, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZDHHC7 MUTATED        1      6      2
  ZDHHC7 WILD-TYPE    158    245    163
D552V7, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZDHHC7 MUTATED        0      4      3      1      1
  ZDHHC7 WILD-TYPE    118    127    148     93     80
D552V8, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZDHHC7 MUTATED        1      4      2      0      1
  ZDHHC7 WILD-TYPE    117    132    113     40     70
D552V9, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZDHHC7 MUTATED        0      3      3      1      1
  ZDHHC7 WILD-TYPE     48    106    127    100     91
D552V10, multiclass
        clus
vv       ZDHHC7 MUTATED ZDHHC7 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(553) Variable = CNNM2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNNM2 MUTATED        1      6      2      9
  CNNM2 WILD-TYPE    134     86    170    167
D553V1, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             6              86
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM2 MUTATED        9      5      1
  CNNM2 WILD-TYPE    206    150    161
D553V2, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             5             150
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNNM2 MUTATED        8      6      1      1
  CNNM2 WILD-TYPE    127    118    124     59
D553V3, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM2 MUTATED       13      3      0
  CNNM2 WILD-TYPE    240     99     89
D553V4, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM2 MUTATED        3     11      4
  CNNM2 WILD-TYPE    161    236    139
D553V5, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM2 MUTATED        3      6      6      2      1
  CNNM2 WILD-TYPE    118     98     85    119    116
D553V6, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             6              98
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM2 MUTATED        4     12      2
  CNNM2 WILD-TYPE    155    239    163
D553V7, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM2 MUTATED        4      5      6      2      1
  CNNM2 WILD-TYPE    114    126    145     92     80
D553V8, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             126
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM2 MUTATED        3      6      2      0      4
  CNNM2 WILD-TYPE    115    130    113     40     67
D553V9, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM2 MUTATED        0      8      3      2      2
  CNNM2 WILD-TYPE     48    101    127     99     90
D553V10, multiclass
        clus
vv       CNNM2 MUTATED CNNM2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(554) Variable = CNNM1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNNM1 MUTATED        0      1      0     11
  CNNM1 WILD-TYPE    135     91    172    165
D554V1, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM1 MUTATED        7      0      4
  CNNM1 WILD-TYPE    208    155    158
D554V2, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNNM1 MUTATED        4      5      1      0
  CNNM1 WILD-TYPE    131    119    124     60
D554V3, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM1 MUTATED        6      4      0
  CNNM1 WILD-TYPE    247     98     89
D554V4, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM1 MUTATED        1      9      3
  CNNM1 WILD-TYPE    163    238    140
D554V5, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM1 MUTATED        1      2      8      0      2
  CNNM1 WILD-TYPE    120    102     83    121    115
D554V6, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             8              83
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNNM1 MUTATED        0     13      0
  CNNM1 WILD-TYPE    159    238    165
D554V7, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            13             238
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM1 MUTATED        0      7      6      0      0
  CNNM1 WILD-TYPE    118    124    145     94     81
D554V8, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM1 MUTATED        0      6      0      0      3
  CNNM1 WILD-TYPE    118    130    115     40     68
D554V9, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNNM1 MUTATED        0      5      3      1      0
  CNNM1 WILD-TYPE     48    104    127    100     92
D554V10, multiclass
        clus
vv       CNNM1 MUTATED CNNM1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(555) Variable = AFF3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AFF3 MUTATED        7      1     10     16
  AFF3 WILD-TYPE    128     91    162    160
D555V1, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            1             91
  CLUS_3           10            162
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AFF3 MUTATED       19      9      6
  AFF3 WILD-TYPE    196    146    156
D555V2, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1           19            196
  CLUS_2            9            146
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AFF3 MUTATED       11     12      3      2
  AFF3 WILD-TYPE    124    112    122     58
D555V3, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1           11            124
  CLUS_2           12            112
  CLUS_3            3            122
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AFF3 MUTATED       20      6      2
  AFF3 WILD-TYPE    233     96     87
D555V4, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1           20            233
  CLUS_2            6             96
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AFF3 MUTATED       10     18      6
  AFF3 WILD-TYPE    154    229    137
D555V5, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1           10            154
  CLUS_2           18            229
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFF3 MUTATED       10      3     13      5      3
  AFF3 WILD-TYPE    111    101     78    116    114
D555V6, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1           10            111
  CLUS_2            3            101
  CLUS_3           13             78
  CLUS_4            5            116
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AFF3 MUTATED        8     18      7
  AFF3 WILD-TYPE    151    233    158
D555V7, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1            8            151
  CLUS_2           18            233
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFF3 MUTATED       10      8      9      5      1
  AFF3 WILD-TYPE    108    123    142     89     80
D555V8, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1           10            108
  CLUS_2            8            123
  CLUS_3            9            142
  CLUS_4            5             89
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFF3 MUTATED        7      8      4      3      7
  AFF3 WILD-TYPE    111    128    111     37     64
D555V9, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1            7            111
  CLUS_2            8            128
  CLUS_3            4            111
  CLUS_4            3             37
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFF3 MUTATED        6      8      8      2      5
  AFF3 WILD-TYPE     42    101    122     99     87
D555V10, multiclass
        clus
vv       AFF3 MUTATED AFF3 WILD-TYPE
  CLUS_1            6             42
  CLUS_2            8            101
  CLUS_3            8            122
  CLUS_4            2             99
  CLUS_5            5             87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(556) Variable = PPIAL4A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPIAL4A MUTATED        1      0      1      1
  PPIAL4A WILD-TYPE    134     92    171    175
D556V1, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               1               175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIAL4A MUTATED        3      0      0
  PPIAL4A WILD-TYPE    212    155    162
D556V2, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               3               212
  CLUS_2               0               155
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPIAL4A MUTATED        1      1      1      0
  PPIAL4A WILD-TYPE    134    123    124     60
D556V3, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1               123
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIAL4A MUTATED        1      0      2
  PPIAL4A WILD-TYPE    252    102     87
D556V4, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               1               252
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIAL4A MUTATED        0      1      1
  PPIAL4A WILD-TYPE    164    246    142
D556V5, multiclass
[1] "Remove cluster labels:" "PPIAL4A MUTATED"       
clus
  PPIAL4A MUTATED PPIAL4A WILD-TYPE 
                2               552 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4187        TCGA-BR-4191 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4201        TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4257        TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4292        TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4362        TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4369        TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6453        TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6457        TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6565        TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6707        TCGA-BR-6709        TCGA-BR-6801        TCGA-BR-6802 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-7716        TCGA-BR-7717        TCGA-BR-7722        TCGA-BR-7723 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-7851        TCGA-BR-7901        TCGA-BR-7957        TCGA-BR-7959 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8058        TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8078        TCGA-BR-8080        TCGA-BR-8081        TCGA-BR-8284 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8286        TCGA-BR-8289        TCGA-BR-8291        TCGA-BR-8295 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8297        TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8365        TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8369        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8373 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8380        TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8483        TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8589        TCGA-BR-8590 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8686        TCGA-BR-8687        TCGA-BR-8690 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A44T        TCGA-BR-A44U        TCGA-BR-A452        TCGA-BR-A453 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4CR        TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4IY        TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4J4        TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4QI        TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-5799        TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5803 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ        TCGA-CG-4301 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4304        TCGA-CG-4305        TCGA-CG-4306        TCGA-CG-4436 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4437        TCGA-CG-4438        TCGA-CG-4440        TCGA-CG-4441 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4460        TCGA-CG-4462        TCGA-CG-4465        TCGA-CG-4466 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-5723        TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-5732        TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-8576        TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX        TCGA-D7-A4YY 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A748        TCGA-D7-A74A        TCGA-EQ-8122        TCGA-EQ-A4SO 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-F1-A72C        TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7916 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-FP-7998        TCGA-FP-8099        TCGA-FP-8209        TCGA-FP-8210 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-FP-8211        TCGA-FP-8631        TCGA-FP-A4BE        TCGA-FP-A4BF 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-FP-A8CX        TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HF-7133        TCGA-HF-7134        TCGA-HF-7136        TCGA-HF-A5NB 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HJ-7597        TCGA-HU-8238        TCGA-HU-8243        TCGA-HU-8244 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-8249        TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-8610        TCGA-HU-A4G2        TCGA-HU-A4G3        TCGA-HU-A4G6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4G8        TCGA-HU-A4G9        TCGA-HU-A4GC        TCGA-HU-A4GD 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4GF        TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4GP        TCGA-HU-A4GQ        TCGA-HU-A4GT        TCGA-HU-A4GU 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H0        TCGA-HU-A4H2 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4H8        TCGA-HU-A4HB        TCGA-HU-A4HD        TCGA-IC-A6RE 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IC-A6RF        TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3Y9 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC        TCGA-IG-A4P3 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L        TCGA-IG-A51D 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625        TCGA-IG-A6QS 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H        TCGA-IG-A97I 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462        TCGA-IN-8663 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL        TCGA-IN-A6RN 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-JY-A938        TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F7        TCGA-KB-A93G 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-KB-A93J        TCGA-KH-A6WC        TCGA-L5-A43C        TCGA-L5-A43E 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J        TCGA-L5-A43M 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG        TCGA-L5-A4OH 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OI        TCGA-L5-A4OJ        TCGA-L5-A4OM        TCGA-L5-A4ON 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T        TCGA-L5-A88V 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z        TCGA-L5-A891 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF        TCGA-L5-A8NG 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN        TCGA-L5-A8NQ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT        TCGA-L5-A8NU 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A7HX        TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A8I0        TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A9FQ        TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-MX-A5UJ        TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R5-A7ZI        TCGA-R5-A7ZR        TCGA-R5-A805        TCGA-R6-A6DN 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WC        TCGA-R6-A8WG 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW        TCGA-RD-A7C1 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0        TCGA-RD-A8N1 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A8N2        TCGA-RD-A8N4        TCGA-RD-A8N5        TCGA-RD-A8N6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-V5-A7RE        TCGA-V5-AASV        TCGA-V5-AASW        TCGA-V5-AASX 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A8DT        TCGA-VQ-A8DU        TCGA-VQ-A8DV        TCGA-VQ-A8DZ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2        TCGA-VQ-A8P3 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM        TCGA-VQ-A8PQ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68        TCGA-VQ-AA69 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F        TCGA-VQ-AA6G 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K        TCGA-VR-A8EO 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER        TCGA-VR-A8ET 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX        TCGA-VR-A8EY 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D        TCGA-VR-AA4G 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I        TCGA-X8-AAAR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-XP-A8T6        TCGA-XP-A8T8        TCGA-Z6-A8JD        TCGA-Z6-A8JE 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-Z6-A9VB        TCGA-Z6-AAPN        TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIAL4A MUTATED        0      0      1      0      1
  PPIAL4A WILD-TYPE    121    104     90    121    116
D556V6, multiclass
[1] "Remove cluster labels:" "PPIAL4A MUTATED"       
clus
  PPIAL4A MUTATED PPIAL4A WILD-TYPE 
                2               552 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4187        TCGA-BR-4191 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4201        TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4257        TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4292        TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4362        TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-4369        TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6453        TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6457        TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6565        TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6707        TCGA-BR-6709        TCGA-BR-6801        TCGA-BR-6802 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-7716        TCGA-BR-7717        TCGA-BR-7722        TCGA-BR-7723 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-7851        TCGA-BR-7901        TCGA-BR-7957        TCGA-BR-7959 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8058        TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8078        TCGA-BR-8080        TCGA-BR-8081        TCGA-BR-8284 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8286        TCGA-BR-8289        TCGA-BR-8291        TCGA-BR-8295 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8297        TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8365        TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8369        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8373 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8380        TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8483        TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8589        TCGA-BR-8590 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8686        TCGA-BR-8687        TCGA-BR-8690 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A44T        TCGA-BR-A44U        TCGA-BR-A452        TCGA-BR-A453 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4CR        TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4IY        TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4J4        TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-BR-A4QI        TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-5799        TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5803 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ        TCGA-CG-4301 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4304        TCGA-CG-4305        TCGA-CG-4306        TCGA-CG-4436 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4437        TCGA-CG-4438        TCGA-CG-4440        TCGA-CG-4441 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4460        TCGA-CG-4462        TCGA-CG-4465        TCGA-CG-4466 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-5723        TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-CG-5732        TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-8576        TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX        TCGA-D7-A4YY 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-D7-A748        TCGA-D7-A74A        TCGA-EQ-8122        TCGA-EQ-A4SO 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-F1-A72C        TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7916 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-FP-7998        TCGA-FP-8099        TCGA-FP-8209        TCGA-FP-8210 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-FP-8211        TCGA-FP-8631        TCGA-FP-A4BE        TCGA-FP-A4BF 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-FP-A8CX        TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HF-7133        TCGA-HF-7134        TCGA-HF-7136        TCGA-HF-A5NB 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HJ-7597        TCGA-HU-8238        TCGA-HU-8243        TCGA-HU-8244 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-8249        TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-8610        TCGA-HU-A4G2        TCGA-HU-A4G3        TCGA-HU-A4G6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4G8        TCGA-HU-A4G9        TCGA-HU-A4GC        TCGA-HU-A4GD 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4GF        TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4GP        TCGA-HU-A4GQ        TCGA-HU-A4GT        TCGA-HU-A4GU 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H0        TCGA-HU-A4H2 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-HU-A4H8        TCGA-HU-A4HB        TCGA-HU-A4HD        TCGA-IC-A6RE 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IC-A6RF        TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3Y9 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC        TCGA-IG-A4P3 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L        TCGA-IG-A51D 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625        TCGA-IG-A6QS 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H        TCGA-IG-A97I 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462        TCGA-IN-8663 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL        TCGA-IN-A6RN 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-JY-A938        TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F7        TCGA-KB-A93G 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-KB-A93J        TCGA-KH-A6WC        TCGA-L5-A43C        TCGA-L5-A43E 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J        TCGA-L5-A43M 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG        TCGA-L5-A4OH 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OI        TCGA-L5-A4OJ        TCGA-L5-A4OM        TCGA-L5-A4ON 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T        TCGA-L5-A88V 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z        TCGA-L5-A891 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF        TCGA-L5-A8NG 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN        TCGA-L5-A8NQ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT        TCGA-L5-A8NU 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A7HX        TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A8I0        TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-LN-A9FQ        TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-MX-A5UJ        TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R5-A7ZI        TCGA-R5-A7ZR        TCGA-R5-A805        TCGA-R6-A6DN 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WC        TCGA-R6-A8WG 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW        TCGA-RD-A7C1 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0        TCGA-RD-A8N1 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A8N2        TCGA-RD-A8N4        TCGA-RD-A8N5        TCGA-RD-A8N6 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-V5-A7RE        TCGA-V5-AASV        TCGA-V5-AASW        TCGA-V5-AASX 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A8DT        TCGA-VQ-A8DU        TCGA-VQ-A8DV        TCGA-VQ-A8DZ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2        TCGA-VQ-A8P3 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM        TCGA-VQ-A8PQ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68        TCGA-VQ-AA69 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F        TCGA-VQ-AA6G 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K        TCGA-VR-A8EO 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER        TCGA-VR-A8ET 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX        TCGA-VR-A8EY 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D        TCGA-VR-AA4G 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I        TCGA-X8-AAAR 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-XP-A8T6        TCGA-XP-A8T8        TCGA-Z6-A8JD        TCGA-Z6-A8JE 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
       TCGA-Z6-A9VB        TCGA-Z6-AAPN        TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" "PPIAL4A WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PPIAL4A MUTATED        0      2      1
  PPIAL4A WILD-TYPE    159    249    164
D556V7, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               0               159
  CLUS_2               2               249
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIAL4A MUTATED        0      1      1      0      1
  PPIAL4A WILD-TYPE    118    130    150     94     80
D556V8, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIAL4A MUTATED        0      0      1      1      1
  PPIAL4A WILD-TYPE    118    136    114     39     70
D556V9, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               0               136
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPIAL4A MUTATED        0      1      1      1      0
  PPIAL4A WILD-TYPE     48    108    129    100     92
D556V10, multiclass
        clus
vv       PPIAL4A MUTATED PPIAL4A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(557) Variable = MKL2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKL2 MUTATED        1      2      4     11
  MKL2 WILD-TYPE    134     90    168    165
D557V1, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            4            168
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL2 MUTATED       11      2      2
  MKL2 WILD-TYPE    204    153    160
D557V2, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1           11            204
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKL2 MUTATED        5      7      1      0
  MKL2 WILD-TYPE    130    117    124     60
D557V3, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            7            117
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL2 MUTATED        7      5      1
  MKL2 WILD-TYPE    246     97     88
D557V4, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL2 MUTATED        4     13      1
  MKL2 WILD-TYPE    160    234    142
D557V5, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           13            234
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL2 MUTATED        2      4      8      2      2
  MKL2 WILD-TYPE    119    100     83    119    115
D557V6, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            4            100
  CLUS_3            8             83
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL2 MUTATED        2     13      3
  MKL2 WILD-TYPE    157    238    162
D557V7, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           13            238
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL2 MUTATED        2      9      4      1      2
  MKL2 WILD-TYPE    116    122    147     93     79
D557V8, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            9            122
  CLUS_3            4            147
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL2 MUTATED        1      6      1      2      3
  MKL2 WILD-TYPE    117    130    114     38     68
D557V9, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            130
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL2 MUTATED        1      6      5      0      1
  MKL2 WILD-TYPE     47    103    125    101     91
D557V10, multiclass
        clus
vv       MKL2 MUTATED MKL2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(558) Variable = PLAG1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLAG1 MUTATED        0      0      3     11
  PLAG1 WILD-TYPE    135     92    169    165
D558V1, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLAG1 MUTATED        5      2      3
  PLAG1 WILD-TYPE    210    153    159
D558V2, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLAG1 MUTATED        4      3      2      2
  PLAG1 WILD-TYPE    131    121    123     58
D558V3, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3             121
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLAG1 MUTATED        7      2      2
  PLAG1 WILD-TYPE    246    100     87
D558V4, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLAG1 MUTATED        3      6      4
  PLAG1 WILD-TYPE    161    241    139
D558V5, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAG1 MUTATED        1      3      3      2      4
  PLAG1 WILD-TYPE    120    101     88    119    113
D558V6, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PLAG1 MUTATED        3      8      3
  PLAG1 WILD-TYPE    156    243    162
D558V7, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAG1 MUTATED        1      3      7      2      1
  PLAG1 WILD-TYPE    117    128    144     92     80
D558V8, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAG1 MUTATED        3      3      1      0      3
  PLAG1 WILD-TYPE    115    133    114     40     68
D558V9, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAG1 MUTATED        1      2      4      1      2
  PLAG1 WILD-TYPE     47    107    126    100     90
D558V10, multiclass
        clus
vv       PLAG1 MUTATED PLAG1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(559) Variable = EXPH5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EXPH5 MUTATED        3      1      0     13
  EXPH5 WILD-TYPE    132     91    172    163
D559V1, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EXPH5 MUTATED       12      1      1
  EXPH5 WILD-TYPE    203    154    161
D559V2, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EXPH5 MUTATED        7      6      1      1
  EXPH5 WILD-TYPE    128    118    124     59
D559V3, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EXPH5 MUTATED       13      1      1
  EXPH5 WILD-TYPE    240    101     88
D559V4, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EXPH5 MUTATED        0     12      4
  EXPH5 WILD-TYPE    164    235    139
D559V5, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            12             235
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXPH5 MUTATED        2      4      7      0      3
  EXPH5 WILD-TYPE    119    100     84    121    114
D559V6, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EXPH5 MUTATED        1     13      3
  EXPH5 WILD-TYPE    158    238    162
D559V7, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            13             238
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXPH5 MUTATED        1      9      7      0      0
  EXPH5 WILD-TYPE    117    122    144     94     81
D559V8, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXPH5 MUTATED        0      5      1      2      4
  EXPH5 WILD-TYPE    118    131    114     38     67
D559V9, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXPH5 MUTATED        1      6      5      0      0
  EXPH5 WILD-TYPE     47    103    125    101     92
D559V10, multiclass
        clus
vv       EXPH5 MUTATED EXPH5 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(560) Variable = ARMC4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARMC4 MUTATED        5      2      5     14
  ARMC4 WILD-TYPE    130     90    167    162
D560V1, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             2              90
  CLUS_3             5             167
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARMC4 MUTATED       19      4      2
  ARMC4 WILD-TYPE    196    151    160
D560V2, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             4             151
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARMC4 MUTATED        7      5      4      3
  ARMC4 WILD-TYPE    128    119    121     57
D560V3, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             5             119
  CLUS_3             4             121
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARMC4 MUTATED       12      3      4
  ARMC4 WILD-TYPE    241     99     85
D560V4, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             3              99
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARMC4 MUTATED        7     13      6
  ARMC4 WILD-TYPE    157    234    137
D560V5, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            13             234
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARMC4 MUTATED        4      4     10      3      5
  ARMC4 WILD-TYPE    117    100     81    118    112
D560V6, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             4             100
  CLUS_3            10              81
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ARMC4 MUTATED        8     11      6
  ARMC4 WILD-TYPE    151    240    159
D560V7, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             8             151
  CLUS_2            11             240
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARMC4 MUTATED        6     11      4      2      2
  ARMC4 WILD-TYPE    112    120    147     92     79
D560V8, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             6             112
  CLUS_2            11             120
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARMC4 MUTATED        4      7      6      4      1
  ARMC4 WILD-TYPE    114    129    109     36     70
D560V9, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             129
  CLUS_3             6             109
  CLUS_4             4              36
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARMC4 MUTATED        3      7      3      7      2
  ARMC4 WILD-TYPE     45    102    127     94     90
D560V10, multiclass
        clus
vv       ARMC4 MUTATED ARMC4 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             7             102
  CLUS_3             3             127
  CLUS_4             7              94
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(561) Variable = MAGEE2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAGEE2 MUTATED        2      5      3      7
  MAGEE2 WILD-TYPE    133     87    169    169
D561V1, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5               87
  CLUS_3              3              169
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAGEE2 MUTATED       14      0      3
  MAGEE2 WILD-TYPE    201    155    159
D561V2, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              0              155
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAGEE2 MUTATED        3      5      4      2
  MAGEE2 WILD-TYPE    132    119    121     58
D561V3, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              5              119
  CLUS_3              4              121
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAGEE2 MUTATED        7      4      3
  MAGEE2 WILD-TYPE    246     98     86
D561V4, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAGEE2 MUTATED        3      6      7
  MAGEE2 WILD-TYPE    161    241    136
D561V5, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAGEE2 MUTATED        2      3      5      1      5
  MAGEE2 WILD-TYPE    119    101     86    120    112
D561V6, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              5               86
  CLUS_4              1              120
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAGEE2 MUTATED        1     11      5
  MAGEE2 WILD-TYPE    158    240    160
D561V7, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             11              240
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAGEE2 MUTATED        1      6      8      0      2
  MAGEE2 WILD-TYPE    117    125    143     94     79
D561V8, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              8              143
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAGEE2 MUTATED        1      6      5      1      3
  MAGEE2 WILD-TYPE    117    130    110     39     68
D561V9, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              5              110
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAGEE2 MUTATED        0      6      8      2      0
  MAGEE2 WILD-TYPE     48    103    122     99     92
D561V10, multiclass
        clus
vv       MAGEE2 MUTATED MAGEE2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(562) Variable = FGF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF1 MUTATED        0      2      2      1
  FGF1 WILD-TYPE    135     90    170    175
D562V1, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            1            175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF1 MUTATED        4      0      1
  FGF1 WILD-TYPE    211    155    161
D562V2, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF1 MUTATED        0      2      0      1
  FGF1 WILD-TYPE    135    122    125     59
D562V3, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF1 MUTATED        1      2      0
  FGF1 WILD-TYPE    252    100     89
D562V4, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF1 MUTATED        1      3      0
  FGF1 WILD-TYPE    163    244    143
D562V5, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF1 MUTATED        0      3      0      1      0
  FGF1 WILD-TYPE    121    101     91    120    117
D562V6, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            0             91
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF1 MUTATED        2      3      0
  FGF1 WILD-TYPE    157    248    165
D562V7, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            3            248
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF1 MUTATED        2      2      1      0      0
  FGF1 WILD-TYPE    116    129    150     94     81
D562V8, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            129
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF1 MUTATED        2      1      0      0      2
  FGF1 WILD-TYPE    116    135    115     40     69
D562V9, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF1 MUTATED        0      3      2      0      0
  FGF1 WILD-TYPE     48    106    128    101     92
D562V10, multiclass
        clus
vv       FGF1 MUTATED FGF1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(563) Variable = KIF13A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF13A MUTATED        1      0      4     19
  KIF13A WILD-TYPE    134     92    168    157
D563V1, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              4              168
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF13A MUTATED       15      2      3
  KIF13A WILD-TYPE    200    153    159
D563V2, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1             15              200
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF13A MUTATED       10      7      4      2
  KIF13A WILD-TYPE    125    117    121     58
D563V3, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1             10              125
  CLUS_2              7              117
  CLUS_3              4              121
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF13A MUTATED       16      3      4
  KIF13A WILD-TYPE    237     99     85
D563V4, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1             16              237
  CLUS_2              3               99
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF13A MUTATED        4     13      8
  KIF13A WILD-TYPE    160    234    135
D563V5, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              4              160
  CLUS_2             13              234
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF13A MUTATED        0      4     10      3      8
  KIF13A WILD-TYPE    121    100     81    118    109
D563V6, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              0              121
  CLUS_2              4              100
  CLUS_3             10               81
  CLUS_4              3              118
  CLUS_5              8              109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF13A MUTATED        3     16      6
  KIF13A WILD-TYPE    156    235    159
D563V7, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              3              156
  CLUS_2             16              235
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF13A MUTATED        0     11      9      2      3
  KIF13A WILD-TYPE    118    120    142     92     78
D563V8, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              0              118
  CLUS_2             11              120
  CLUS_3              9              142
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF13A MUTATED        1      6      4      1      5
  KIF13A WILD-TYPE    117    130    111     39     66
D563V9, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF13A MUTATED        0      6      8      1      2
  KIF13A WILD-TYPE     48    103    122    100     90
D563V10, multiclass
        clus
vv       KIF13A MUTATED KIF13A WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              8              122
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(564) Variable = GLT8D1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLT8D1 MUTATED        0      0      0      7
  GLT8D1 WILD-TYPE    135     92    172    169
D564V1, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT8D1 MUTATED        5      0      0
  GLT8D1 WILD-TYPE    210    155    162
D564V2, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLT8D1 MUTATED        3      2      0      1
  GLT8D1 WILD-TYPE    132    122    125     59
D564V3, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT8D1 MUTATED        4      2      0
  GLT8D1 WILD-TYPE    249    100     89
D564V4, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT8D1 MUTATED        0      5      2
  GLT8D1 WILD-TYPE    164    242    141
D564V5, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              5              242
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT8D1 MUTATED        0      2      3      0      2
  GLT8D1 WILD-TYPE    121    102     88    121    115
D564V6, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLT8D1 MUTATED        0      7      0
  GLT8D1 WILD-TYPE    159    244    165
D564V7, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT8D1 MUTATED        0      3      4      0      0
  GLT8D1 WILD-TYPE    118    128    147     94     81
D564V8, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT8D1 MUTATED        0      3      0      0      2
  GLT8D1 WILD-TYPE    118    133    115     40     69
D564V9, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLT8D1 MUTATED        0      2      3      0      0
  GLT8D1 WILD-TYPE     48    107    127    101     92
D564V10, multiclass
        clus
vv       GLT8D1 MUTATED GLT8D1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(565) Variable = SMARCB1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        2      0      3     11
  SMARCB1 WILD-TYPE    133     92    169    165
D565V1, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED       12      0      1
  SMARCB1 WILD-TYPE    203    155    161
D565V2, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1              12               203
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCB1 MUTATED        7      5      3      0
  SMARCB1 WILD-TYPE    128    119    122     60
D565V3, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               7               128
  CLUS_2               5               119
  CLUS_3               3               122
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        9      4      2
  SMARCB1 WILD-TYPE    244     98     87
D565V4, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               9               244
  CLUS_2               4                98
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        1      9      5
  SMARCB1 WILD-TYPE    163    238    138
D565V5, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCB1 MUTATED        2      4      5      1      3
  SMARCB1 WILD-TYPE    119    100     86    120    114
D565V6, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               4               100
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCB1 MUTATED        2     10      4
  SMARCB1 WILD-TYPE    157    241    161
D565V7, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              10               241
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCB1 MUTATED        0      8      6      0      2
  SMARCB1 WILD-TYPE    118    123    145     94     79
D565V8, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               8               123
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCB1 MUTATED        1      2      4      0      3
  SMARCB1 WILD-TYPE    117    134    111     40     68
D565V9, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               4               111
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCB1 MUTATED        1      3      4      2      0
  SMARCB1 WILD-TYPE     47    106    126     99     92
D565V10, multiclass
        clus
vv       SMARCB1 MUTATED SMARCB1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               4               126
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(566) Variable = PRRG3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRRG3 MUTATED        1      1      1      7
  PRRG3 WILD-TYPE    134     91    171    169
D566V1, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG3 MUTATED        4      1      3
  PRRG3 WILD-TYPE    211    154    159
D566V2, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRRG3 MUTATED        3      4      0      1
  PRRG3 WILD-TYPE    132    120    125     59
D566V3, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG3 MUTATED        6      2      0
  PRRG3 WILD-TYPE    247    100     89
D566V4, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG3 MUTATED        3      4      2
  PRRG3 WILD-TYPE    161    243    141
D566V5, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG3 MUTATED        2      1      2      1      3
  PRRG3 WILD-TYPE    119    103     89    120    114
D566V6, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRRG3 MUTATED        1      7      2
  PRRG3 WILD-TYPE    158    244    163
D566V7, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG3 MUTATED        0      4      5      1      0
  PRRG3 WILD-TYPE    118    127    146     93     81
D566V8, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG3 MUTATED        1      0      1      0      5
  PRRG3 WILD-TYPE    117    136    114     40     66
D566V9, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             0             136
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRRG3 MUTATED        0      1      5      0      1
  PRRG3 WILD-TYPE     48    108    125    101     91
D566V10, multiclass
        clus
vv       PRRG3 MUTATED PRRG3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(567) Variable = CSGALNACT1 MUTATION ANALYSIS
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSGALNACT1 MUTATED        2      3      4     10
  CSGALNACT1 WILD-TYPE    133     89    168    166
D567V1, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  2                  133
  CLUS_2                  3                   89
  CLUS_3                  4                  168
  CLUS_4                 10                  166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3
  CSGALNACT1 MUTATED        6      4      5
  CSGALNACT1 WILD-TYPE    209    151    157
D567V2, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  6                  209
  CLUS_2                  4                  151
  CLUS_3                  5                  157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSGALNACT1 MUTATED        6      6      3      2
  CSGALNACT1 WILD-TYPE    129    118    122     58
D567V3, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  6                  129
  CLUS_2                  6                  118
  CLUS_3                  3                  122
  CLUS_4                  2                   58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3
  CSGALNACT1 MUTATED       11      3      3
  CSGALNACT1 WILD-TYPE    242     99     86
D567V4, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                 11                  242
  CLUS_2                  3                   99
  CLUS_3                  3                   86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3
  CSGALNACT1 MUTATED        2      8      6
  CSGALNACT1 WILD-TYPE    162    239    137
D567V5, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  2                  162
  CLUS_2                  8                  239
  CLUS_3                  6                  137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSGALNACT1 MUTATED        5      1      6      0      4
  CSGALNACT1 WILD-TYPE    116    103     85    121    113
D567V6, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  5                  116
  CLUS_2                  1                  103
  CLUS_3                  6                   85
  CLUS_4                  0                  121
  CLUS_5                  4                  113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3
  CSGALNACT1 MUTATED        4      8      7
  CSGALNACT1 WILD-TYPE    155    243    158
D567V7, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  4                  155
  CLUS_2                  8                  243
  CLUS_3                  7                  158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSGALNACT1 MUTATED        6      4      5      0      4
  CSGALNACT1 WILD-TYPE    112    127    146     94     77
D567V8, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  6                  112
  CLUS_2                  4                  127
  CLUS_3                  5                  146
  CLUS_4                  0                   94
  CLUS_5                  4                   77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSGALNACT1 MUTATED        2      4      4      2      3
  CSGALNACT1 WILD-TYPE    116    132    111     38     68
D567V9, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  2                  116
  CLUS_2                  4                  132
  CLUS_3                  4                  111
  CLUS_4                  2                   38
  CLUS_5                  3                   68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                      vv
clus                   CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSGALNACT1 MUTATED        4      3      4      4      0
  CSGALNACT1 WILD-TYPE     44    106    126     97     92
D567V10, multiclass
        clus
vv       CSGALNACT1 MUTATED CSGALNACT1 WILD-TYPE
  CLUS_1                  4                   44
  CLUS_2                  3                  106
  CLUS_3                  4                  126
  CLUS_4                  4                   97
  CLUS_5                  0                   92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(568) Variable = BEND3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BEND3 MUTATED        2      0      1     11
  BEND3 WILD-TYPE    133     92    171    165
D568V1, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND3 MUTATED        7      1      3
  BEND3 WILD-TYPE    208    154    159
D568V2, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BEND3 MUTATED        2      7      1      1
  BEND3 WILD-TYPE    133    117    124     59
D568V3, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND3 MUTATED        6      4      1
  BEND3 WILD-TYPE    247     98     88
D568V4, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND3 MUTATED        3      7      3
  BEND3 WILD-TYPE    161    240    140
D568V5, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND3 MUTATED        0      3      5      1      4
  BEND3 WILD-TYPE    121    101     86    120    113
D568V6, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND3 MUTATED        1      9      4
  BEND3 WILD-TYPE    158    242    161
D568V7, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND3 MUTATED        1      7      4      1      1
  BEND3 WILD-TYPE    117    124    147     93     80
D568V8, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND3 MUTATED        0      4      2      1      4
  BEND3 WILD-TYPE    118    132    113     39     67
D568V9, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND3 MUTATED        0      4      4      2      1
  BEND3 WILD-TYPE     48    105    126     99     91
D568V10, multiclass
        clus
vv       BEND3 MUTATED BEND3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(569) Variable = TPD52L1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPD52L1 MUTATED        3      0      2      8
  TPD52L1 WILD-TYPE    132     92    170    168
D569V1, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TPD52L1 MUTATED        5      3      2
  TPD52L1 WILD-TYPE    210    152    160
D569V2, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               3               152
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPD52L1 MUTATED        5      7      1      0
  TPD52L1 WILD-TYPE    130    117    124     60
D569V3, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               7               117
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TPD52L1 MUTATED        7      5      1
  TPD52L1 WILD-TYPE    246     97     88
D569V4, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               5                97
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TPD52L1 MUTATED        3      5      4
  TPD52L1 WILD-TYPE    161    242    139
D569V5, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               5               242
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPD52L1 MUTATED        1      4      4      2      1
  TPD52L1 WILD-TYPE    120    100     87    119    116
D569V6, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               4               100
  CLUS_3               4                87
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TPD52L1 MUTATED        0     10      3
  TPD52L1 WILD-TYPE    159    241    162
D569V7, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              10               241
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPD52L1 MUTATED        3      4      4      1      1
  TPD52L1 WILD-TYPE    115    127    147     93     80
D569V8, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPD52L1 MUTATED        0      4      3      1      2
  TPD52L1 WILD-TYPE    118    132    112     39     69
D569V9, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPD52L1 MUTATED        3      3      2      1      1
  TPD52L1 WILD-TYPE     45    106    128    100     91
D569V10, multiclass
        clus
vv       TPD52L1 MUTATED TPD52L1 WILD-TYPE
  CLUS_1               3                45
  CLUS_2               3               106
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(570) Variable = R3HDM2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  R3HDM2 MUTATED        0      2      3      9
  R3HDM2 WILD-TYPE    135     90    169    167
D570V1, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  R3HDM2 MUTATED        4      5      2
  R3HDM2 WILD-TYPE    211    150    160
D570V2, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              5              150
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  R3HDM2 MUTATED        5      6      1      1
  R3HDM2 WILD-TYPE    130    118    124     59
D570V3, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  R3HDM2 MUTATED        9      4      0
  R3HDM2 WILD-TYPE    244     98     89
D570V4, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  R3HDM2 MUTATED        5      5      4
  R3HDM2 WILD-TYPE    159    242    139
D570V5, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  R3HDM2 MUTATED        3      1      3      4      3
  R3HDM2 WILD-TYPE    118    103     88    117    114
D570V6, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              4              117
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  R3HDM2 MUTATED        5      9      1
  R3HDM2 WILD-TYPE    154    242    164
D570V7, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              5              154
  CLUS_2              9              242
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  R3HDM2 MUTATED        0      4      6      5      0
  R3HDM2 WILD-TYPE    118    127    145     89     81
D570V8, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              6              145
  CLUS_4              5               89
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  R3HDM2 MUTATED        4      2      1      0      4
  R3HDM2 WILD-TYPE    114    134    114     40     67
D570V9, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  R3HDM2 MUTATED        0      3      2      1      5
  R3HDM2 WILD-TYPE     48    106    128    100     87
D570V10, multiclass
        clus
vv       R3HDM2 MUTATED R3HDM2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              5               87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(571) Variable = INPP5F MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INPP5F MUTATED        1      1      3     16
  INPP5F WILD-TYPE    134     91    169    160
D571V1, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPP5F MUTATED       11      3      3
  INPP5F WILD-TYPE    204    152    159
D571V2, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1             11              204
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INPP5F MUTATED        8      8      0      2
  INPP5F WILD-TYPE    127    116    125     58
D571V3, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              8              127
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPP5F MUTATED       11      6      1
  INPP5F WILD-TYPE    242     96     88
D571V4, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1             11              242
  CLUS_2              6               96
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPP5F MUTATED        4     12      5
  INPP5F WILD-TYPE    160    235    138
D571V5, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              4              160
  CLUS_2             12              235
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPP5F MUTATED        1      5      9      2      4
  INPP5F WILD-TYPE    120     99     82    119    113
D571V6, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              9               82
  CLUS_4              2              119
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  INPP5F MUTATED        2     15      4
  INPP5F WILD-TYPE    157    236    161
D571V7, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              2              157
  CLUS_2             15              236
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPP5F MUTATED        1      8     10      2      0
  INPP5F WILD-TYPE    117    123    141     92     81
D571V8, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              123
  CLUS_3             10              141
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPP5F MUTATED        2      5      3      1      5
  INPP5F WILD-TYPE    116    131    112     39     66
D571V9, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              131
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INPP5F MUTATED        1      4      8      1      2
  INPP5F WILD-TYPE     47    105    122    100     90
D571V10, multiclass
        clus
vv       INPP5F MUTATED INPP5F WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              8              122
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(572) Variable = KIAA1632 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1632 MUTATED        2      3      7     21
  KIAA1632 WILD-TYPE    133     89    165    155
D572V1, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                3                 89
  CLUS_3                7                165
  CLUS_4               21                155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1632 MUTATED       19      5      4
  KIAA1632 WILD-TYPE    196    150    158
D572V2, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1               19                196
  CLUS_2                5                150
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1632 MUTATED       11     10      4      2
  KIAA1632 WILD-TYPE    124    114    121     58
D572V3, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1               11                124
  CLUS_2               10                114
  CLUS_3                4                121
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1632 MUTATED       15      7      5
  KIAA1632 WILD-TYPE    238     95     84
D572V4, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1               15                238
  CLUS_2                7                 95
  CLUS_3                5                 84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1632 MUTATED        6     18      9
  KIAA1632 WILD-TYPE    158    229    134
D572V5, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                6                158
  CLUS_2               18                229
  CLUS_3                9                134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1632 MUTATED        3      9     10      4      7
  KIAA1632 WILD-TYPE    118     95     81    117    110
D572V6, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                9                 95
  CLUS_3               10                 81
  CLUS_4                4                117
  CLUS_5                7                110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1632 MUTATED        6     20      7
  KIAA1632 WILD-TYPE    153    231    158
D572V7, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                6                153
  CLUS_2               20                231
  CLUS_3                7                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1632 MUTATED        4     10     11      3      5
  KIAA1632 WILD-TYPE    114    121    140     91     76
D572V8, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                4                114
  CLUS_2               10                121
  CLUS_3               11                140
  CLUS_4                3                 91
  CLUS_5                5                 76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1632 MUTATED        3     10      5      2      7
  KIAA1632 WILD-TYPE    115    126    110     38     64
D572V9, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                3                115
  CLUS_2               10                126
  CLUS_3                5                110
  CLUS_4                2                 38
  CLUS_5                7                 64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1632 MUTATED        1      9     11      3      3
  KIAA1632 WILD-TYPE     47    100    119     98     89
D572V10, multiclass
        clus
vv       KIAA1632 MUTATED KIAA1632 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                9                100
  CLUS_3               11                119
  CLUS_4                3                 98
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(573) Variable = PHACTR1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHACTR1 MUTATED        0      0      2      9
  PHACTR1 WILD-TYPE    135     92    170    167
D573V1, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR1 MUTATED        5      0      2
  PHACTR1 WILD-TYPE    210    155    160
D573V2, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHACTR1 MUTATED        5      4      2      0
  PHACTR1 WILD-TYPE    130    120    123     60
D573V3, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               4               120
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR1 MUTATED        8      1      2
  PHACTR1 WILD-TYPE    245    101     87
D573V4, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR1 MUTATED        0      5      6
  PHACTR1 WILD-TYPE    164    242    137
D573V5, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               5               242
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR1 MUTATED        0      1      5      1      4
  PHACTR1 WILD-TYPE    121    103     86    120    113
D573V6, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR1 MUTATED        0      6      5
  PHACTR1 WILD-TYPE    159    245    160
D573V7, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               6               245
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR1 MUTATED        1      5      2      1      2
  PHACTR1 WILD-TYPE    117    126    149     93     79
D573V8, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR1 MUTATED        0      2      3      1      1
  PHACTR1 WILD-TYPE    118    134    112     39     70
D573V9, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR1 MUTATED        0      3      1      2      1
  PHACTR1 WILD-TYPE     48    106    129     99     91
D573V10, multiclass
        clus
vv       PHACTR1 MUTATED PHACTR1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               1               129
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(574) Variable = PHACTR4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHACTR4 MUTATED        2      1      0      9
  PHACTR4 WILD-TYPE    133     91    172    167
D574V1, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR4 MUTATED       11      0      0
  PHACTR4 WILD-TYPE    204    155    162
D574V2, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               0               155
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHACTR4 MUTATED        5      3      0      1
  PHACTR4 WILD-TYPE    130    121    125     59
D574V3, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR4 MUTATED        8      1      0
  PHACTR4 WILD-TYPE    245    101     89
D574V4, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR4 MUTATED        1      8      1
  PHACTR4 WILD-TYPE    163    239    142
D574V5, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               8               239
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR4 MUTATED        1      3      5      0      1
  PHACTR4 WILD-TYPE    120    101     86    121    116
D574V6, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               5                86
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR4 MUTATED        0     10      2
  PHACTR4 WILD-TYPE    159    241    163
D574V7, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              10               241
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR4 MUTATED        0      6      5      0      1
  PHACTR4 WILD-TYPE    118    125    146     94     80
D574V8, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR4 MUTATED        0      4      2      0      4
  PHACTR4 WILD-TYPE    118    132    113     40     67
D574V9, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR4 MUTATED        0      4      4      2      0
  PHACTR4 WILD-TYPE     48    105    126     99     92
D574V10, multiclass
        clus
vv       PHACTR4 MUTATED PHACTR4 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               4               126
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(575) Variable = MRPS5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRPS5 MUTATED        2      0      1      5
  MRPS5 WILD-TYPE    133     92    171    171
D575V1, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MRPS5 MUTATED        7      1      1
  MRPS5 WILD-TYPE    208    154    161
D575V2, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRPS5 MUTATED        4      2      1      0
  MRPS5 WILD-TYPE    131    122    124     60
D575V3, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MRPS5 MUTATED        4      2      1
  MRPS5 WILD-TYPE    249    100     88
D575V4, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MRPS5 MUTATED        3      5      1
  MRPS5 WILD-TYPE    161    242    142
D575V5, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPS5 MUTATED        0      1      5      1      2
  MRPS5 WILD-TYPE    121    103     86    120    115
D575V6, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MRPS5 MUTATED        1      6      2
  MRPS5 WILD-TYPE    158    245    163
D575V7, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPS5 MUTATED        0      4      3      1      1
  MRPS5 WILD-TYPE    118    127    148     93     80
D575V8, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPS5 MUTATED        0      2      1      3      2
  MRPS5 WILD-TYPE    118    134    114     37     69
D575V9, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             3              37
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPS5 MUTATED        1      2      4      0      1
  MRPS5 WILD-TYPE     47    107    126    101     91
D575V10, multiclass
        clus
vv       MRPS5 MUTATED MRPS5 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(576) Variable = SLC38A6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC38A6 MUTATED        3      2      0      5
  SLC38A6 WILD-TYPE    132     90    172    171
D576V1, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC38A6 MUTATED        7      1      2
  SLC38A6 WILD-TYPE    208    154    160
D576V2, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC38A6 MUTATED        2      3      1      1
  SLC38A6 WILD-TYPE    133    121    124     59
D576V3, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC38A6 MUTATED        6      1      0
  SLC38A6 WILD-TYPE    247    101     89
D576V4, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC38A6 MUTATED        2      6      1
  SLC38A6 WILD-TYPE    162    241    142
D576V5, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC38A6 MUTATED        0      2      4      2      1
  SLC38A6 WILD-TYPE    121    102     87    119    116
D576V6, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               4                87
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC38A6 MUTATED        1      7      2
  SLC38A6 WILD-TYPE    158    244    163
D576V7, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               7               244
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC38A6 MUTATED        0      5      3      1      1
  SLC38A6 WILD-TYPE    118    126    148     93     80
D576V8, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               126
  CLUS_3               3               148
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC38A6 MUTATED        1      4      0      1      4
  SLC38A6 WILD-TYPE    117    132    115     39     67
D576V9, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               132
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC38A6 MUTATED        0      3      5      1      1
  SLC38A6 WILD-TYPE     48    106    125    100     91
D576V10, multiclass
        clus
vv       SLC38A6 MUTATED SLC38A6 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(577) Variable = PDS5A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDS5A MUTATED        3      1      5     14
  PDS5A WILD-TYPE    132     91    167    162
D577V1, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             5             167
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5A MUTATED       14      4      4
  PDS5A WILD-TYPE    201    151    158
D577V2, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1            14             201
  CLUS_2             4             151
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDS5A MUTATED        5      8      0      2
  PDS5A WILD-TYPE    130    116    125     58
D577V3, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             5             130
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5A MUTATED        9      6      0
  PDS5A WILD-TYPE    244     96     89
D577V4, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             9             244
  CLUS_2             6              96
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5A MUTATED        7     11      4
  PDS5A WILD-TYPE    157    236    139
D577V5, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             7             157
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5A MUTATED        1      4      8      6      3
  PDS5A WILD-TYPE    120    100     83    115    114
D577V6, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             6             115
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDS5A MUTATED        8     14      2
  PDS5A WILD-TYPE    151    237    163
D577V7, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             8             151
  CLUS_2            14             237
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5A MUTATED        1     10      8      4      1
  PDS5A WILD-TYPE    117    121    143     90     80
D577V8, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             1             117
  CLUS_2            10             121
  CLUS_3             8             143
  CLUS_4             4              90
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5A MUTATED        7      8      0      1      5
  PDS5A WILD-TYPE    111    128    115     39     66
D577V9, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             7             111
  CLUS_2             8             128
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDS5A MUTATED        3      7      6      1      4
  PDS5A WILD-TYPE     45    102    124    100     88
D577V10, multiclass
        clus
vv       PDS5A MUTATED PDS5A WILD-TYPE
  CLUS_1             3              45
  CLUS_2             7             102
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(578) Variable = KLHL14 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLHL14 MUTATED        2      1      2     15
  KLHL14 WILD-TYPE    133     91    170    161
D578V1, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHL14 MUTATED       12      3      2
  KLHL14 WILD-TYPE    203    152    160
D578V2, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLHL14 MUTATED        8      9      0      1
  KLHL14 WILD-TYPE    127    115    125     59
D578V3, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              9              115
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHL14 MUTATED       12      4      2
  KLHL14 WILD-TYPE    241     98     87
D578V4, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHL14 MUTATED        4      9      6
  KLHL14 WILD-TYPE    160    238    137
D578V5, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              9              238
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHL14 MUTATED        3      2      9      1      4
  KLHL14 WILD-TYPE    118    102     82    120    113
D578V6, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              2              102
  CLUS_3              9               82
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KLHL14 MUTATED        5     12      3
  KLHL14 WILD-TYPE    154    239    162
D578V7, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             12              239
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHL14 MUTATED        3      5      9      1      2
  KLHL14 WILD-TYPE    115    126    142     93     79
D578V8, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              126
  CLUS_3              9              142
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHL14 MUTATED        2      6      3      0      6
  KLHL14 WILD-TYPE    116    130    112     40     65
D578V9, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLHL14 MUTATED        2      4      8      2      1
  KLHL14 WILD-TYPE     46    105    122     99     91
D578V10, multiclass
        clus
vv       KLHL14 MUTATED KLHL14 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(579) Variable = F8 MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  F8 MUTATED        9      3      6     19
  F8 WILD-TYPE    126     89    166    157
D579V1, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          9          126
  CLUS_2          3           89
  CLUS_3          6          166
  CLUS_4         19          157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  F8 MUTATED       19      7      5
  F8 WILD-TYPE    196    148    157
D579V2, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1         19          196
  CLUS_2          7          148
  CLUS_3          5          157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  F8 MUTATED       11     11      5      2
  F8 WILD-TYPE    124    113    120     58
D579V3, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1         11          124
  CLUS_2         11          113
  CLUS_3          5          120
  CLUS_4          2           58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  F8 MUTATED       20      6      3
  F8 WILD-TYPE    233     96     86
D579V4, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1         20          233
  CLUS_2          6           96
  CLUS_3          3           86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  F8 MUTATED        6     23      8
  F8 WILD-TYPE    158    224    135
D579V5, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          6          158
  CLUS_2         23          224
  CLUS_3          8          135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F8 MUTATED        6      8     15      3      5
  F8 WILD-TYPE    115     96     76    118    112
D579V6, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          6          115
  CLUS_2          8           96
  CLUS_3         15           76
  CLUS_4          3          118
  CLUS_5          5          112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  F8 MUTATED        6     26      6
  F8 WILD-TYPE    153    225    159
D579V7, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          6          153
  CLUS_2         26          225
  CLUS_3          6          159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F8 MUTATED        7     16     11      2      2
  F8 WILD-TYPE    111    115    140     92     79
D579V8, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          7          111
  CLUS_2         16          115
  CLUS_3         11          140
  CLUS_4          2           92
  CLUS_5          2           79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F8 MUTATED        6     10      4      2      7
  F8 WILD-TYPE    112    126    111     38     64
D579V9, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          6          112
  CLUS_2         10          126
  CLUS_3          4          111
  CLUS_4          2           38
  CLUS_5          7           64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F8 MUTATED        5     10     10      2      2
  F8 WILD-TYPE     43     99    120     99     90
D579V10, multiclass
        clus
vv       F8 MUTATED F8 WILD-TYPE
  CLUS_1          5           43
  CLUS_2         10           99
  CLUS_3         10          120
  CLUS_4          2           99
  CLUS_5          2           90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(580) Variable = PLAGL2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLAGL2 MUTATED        1      0      2      5
  PLAGL2 WILD-TYPE    134     92    170    171
D580V1, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLAGL2 MUTATED        6      1      2
  PLAGL2 WILD-TYPE    209    154    160
D580V2, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLAGL2 MUTATED        1      2      3      1
  PLAGL2 WILD-TYPE    134    122    122     59
D580V3, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2              122
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLAGL2 MUTATED        5      0      2
  PLAGL2 WILD-TYPE    248    102     87
D580V4, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              0              102
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLAGL2 MUTATED        2      3      4
  PLAGL2 WILD-TYPE    162    244    139
D580V5, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              3              244
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAGL2 MUTATED        1      0      4      1      3
  PLAGL2 WILD-TYPE    120    104     87    120    114
D580V6, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              0              104
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLAGL2 MUTATED        1      3      5
  PLAGL2 WILD-TYPE    158    248    160
D580V7, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              3              248
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAGL2 MUTATED        1      3      2      1      2
  PLAGL2 WILD-TYPE    117    128    149     93     79
D580V8, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAGL2 MUTATED        0      3      2      2      2
  PLAGL2 WILD-TYPE    118    133    113     38     69
D580V9, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLAGL2 MUTATED        0      3      2      3      1
  PLAGL2 WILD-TYPE     48    106    128     98     91
D580V10, multiclass
        clus
vv       PLAGL2 MUTATED PLAGL2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              3               98
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(581) Variable = C8ORF38 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C8ORF38 MUTATED        2      0      0      7
  C8ORF38 WILD-TYPE    133     92    172    169
D581V1, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF38 MUTATED        5      2      0
  C8ORF38 WILD-TYPE    210    153    162
D581V2, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               2               153
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C8ORF38 MUTATED        2      3      1      0
  C8ORF38 WILD-TYPE    133    121    124     60
D581V3, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF38 MUTATED        2      3      1
  C8ORF38 WILD-TYPE    251     99     88
D581V4, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               2               251
  CLUS_2               3                99
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF38 MUTATED        2      4      3
  C8ORF38 WILD-TYPE    162    243    140
D581V5, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               4               243
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF38 MUTATED        1      2      3      1      2
  C8ORF38 WILD-TYPE    120    102     88    120    115
D581V6, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C8ORF38 MUTATED        1      5      3
  C8ORF38 WILD-TYPE    158    246    162
D581V7, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               5               246
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF38 MUTATED        2      1      6      0      0
  C8ORF38 WILD-TYPE    116    130    145     94     81
D581V8, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               130
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF38 MUTATED        0      2      1      1      2
  C8ORF38 WILD-TYPE    118    134    114     39     69
D581V9, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C8ORF38 MUTATED        0      2      3      1      0
  C8ORF38 WILD-TYPE     48    107    127    100     92
D581V10, multiclass
        clus
vv       C8ORF38 MUTATED C8ORF38 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(582) Variable = SIX3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SIX3 MUTATED        1      1      1      9
  SIX3 WILD-TYPE    134     91    171    167
D582V1, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SIX3 MUTATED        8      1      0
  SIX3 WILD-TYPE    207    154    162
D582V2, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SIX3 MUTATED        3      3      1      1
  SIX3 WILD-TYPE    132    121    124     59
D582V3, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SIX3 MUTATED        5      2      1
  SIX3 WILD-TYPE    248    100     88
D582V4, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SIX3 MUTATED        1      9      2
  SIX3 WILD-TYPE    163    238    141
D582V5, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            9            238
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIX3 MUTATED        2      2      7      0      1
  SIX3 WILD-TYPE    119    102     84    121    116
D582V6, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SIX3 MUTATED        0     10      2
  SIX3 WILD-TYPE    159    241    163
D582V7, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           10            241
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIX3 MUTATED        2      7      2      0      1
  SIX3 WILD-TYPE    116    124    149     94     80
D582V8, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            124
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIX3 MUTATED        0      4      2      0      3
  SIX3 WILD-TYPE    118    132    113     40     68
D582V9, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIX3 MUTATED        0      6      2      1      0
  SIX3 WILD-TYPE     48    103    128    100     92
D582V10, multiclass
        clus
vv       SIX3 MUTATED SIX3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(583) Variable = ACAA2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACAA2 MUTATED        1      1      4      6
  ACAA2 WILD-TYPE    134     91    168    170
D583V1, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAA2 MUTATED        7      4      0
  ACAA2 WILD-TYPE    208    151    162
D583V2, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             4             151
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACAA2 MUTATED        6      3      0      0
  ACAA2 WILD-TYPE    129    121    125     60
D583V3, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAA2 MUTATED        9      0      0
  ACAA2 WILD-TYPE    244    102     89
D583V4, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAA2 MUTATED        2      9      0
  ACAA2 WILD-TYPE    162    238    143
D583V5, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             9             238
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAA2 MUTATED        1      2      6      2      0
  ACAA2 WILD-TYPE    120    102     85    119    117
D583V6, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACAA2 MUTATED        2     10      0
  ACAA2 WILD-TYPE    157    241    165
D583V7, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            10             241
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAA2 MUTATED        1      6      3      2      0
  ACAA2 WILD-TYPE    117    125    148     92     81
D583V8, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAA2 MUTATED        2      6      0      2      1
  ACAA2 WILD-TYPE    116    130    115     38     70
D583V9, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACAA2 MUTATED        0      4      5      0      2
  ACAA2 WILD-TYPE     48    105    125    101     90
D583V10, multiclass
        clus
vv       ACAA2 MUTATED ACAA2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(584) Variable = DDX43 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX43 MUTATED        3      0      1     10
  DDX43 WILD-TYPE    132     92    171    166
D584V1, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX43 MUTATED        9      0      1
  DDX43 WILD-TYPE    206    155    161
D584V2, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX43 MUTATED        4      4      2      0
  DDX43 WILD-TYPE    131    120    123     60
D584V3, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX43 MUTATED        6      2      2
  DDX43 WILD-TYPE    247    100     87
D584V4, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX43 MUTATED        0     10      3
  DDX43 WILD-TYPE    164    237    140
D584V5, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX43 MUTATED        3      2      6      0      2
  DDX43 WILD-TYPE    118    102     85    121    115
D584V6, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX43 MUTATED        1     11      2
  DDX43 WILD-TYPE    158    240    163
D584V7, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX43 MUTATED        2      6      5      0      1
  DDX43 WILD-TYPE    116    125    146     94     80
D584V8, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX43 MUTATED        0      6      1      0      1
  DDX43 WILD-TYPE    118    130    114     40     70
D584V9, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX43 MUTATED        2      3      3      0      0
  DDX43 WILD-TYPE     46    106    127    101     92
D584V10, multiclass
        clus
vv       DDX43 MUTATED DDX43 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(585) Variable = ASTE1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASTE1 MUTATED        2      3      3     10
  ASTE1 WILD-TYPE    133     89    169    166
D585V1, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASTE1 MUTATED       12      0      4
  ASTE1 WILD-TYPE    203    155    158
D585V2, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             0             155
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASTE1 MUTATED        7      4      2      1
  ASTE1 WILD-TYPE    128    120    123     59
D585V3, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASTE1 MUTATED       10      2      2
  ASTE1 WILD-TYPE    243    100     87
D585V4, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASTE1 MUTATED        5      9      4
  ASTE1 WILD-TYPE    159    238    139
D585V5, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASTE1 MUTATED        3      5      6      2      2
  ASTE1 WILD-TYPE    118     99     85    119    115
D585V6, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ASTE1 MUTATED        1     13      5
  ASTE1 WILD-TYPE    158    238    160
D585V7, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            13             238
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASTE1 MUTATED        2     10      6      0      1
  ASTE1 WILD-TYPE    116    121    145     94     80
D585V8, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            10             121
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASTE1 MUTATED        0      6      5      1      4
  ASTE1 WILD-TYPE    118    130    110     39     67
D585V9, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             5             110
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASTE1 MUTATED        1      7      7      1      0
  ASTE1 WILD-TYPE     47    102    123    100     92
D585V10, multiclass
        clus
vv       ASTE1 MUTATED ASTE1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(586) Variable = CDC42EP1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC42EP1 MUTATED        0      1      1      2
  CDC42EP1 WILD-TYPE    135     91    171    174
D586V1, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                1                171
  CLUS_4                2                174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  CDC42EP1 MUTATED        4      0      0
  CDC42EP1 WILD-TYPE    211    155    162
D586V2, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC42EP1 MUTATED        3      1      0      0
  CDC42EP1 WILD-TYPE    132    123    125     60
D586V3, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                1                123
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  CDC42EP1 MUTATED        3      0      1
  CDC42EP1 WILD-TYPE    250    102     88
D586V4, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                0                102
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  CDC42EP1 MUTATED        0      3      1
  CDC42EP1 WILD-TYPE    164    244    142
D586V5, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                3                244
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC42EP1 MUTATED        0      0      3      0      1
  CDC42EP1 WILD-TYPE    121    104     88    121    116
D586V6, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                0                104
  CLUS_3                3                 88
  CLUS_4                0                121
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  CDC42EP1 MUTATED        1      3      0
  CDC42EP1 WILD-TYPE    158    248    165
D586V7, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                3                248
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC42EP1 MUTATED        1      3      0      0      0
  CDC42EP1 WILD-TYPE    117    128    151     94     81
D586V8, multiclass
        clus
vv       CDC42EP1 MUTATED CDC42EP1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                128
  CLUS_3                0                151
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC42EP1 MUTATED        0      2      0      0      0
  CDC42EP1 WILD-TYPE    118    134    115     40     71
D586V9, multiclass
[1] "Remove cluster labels:" "CDC42EP1 MUTATED"      
clus
  CDC42EP1 MUTATED CDC42EP1 WILD-TYPE 
                 2                478 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7717 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7723         TCGA-BR-7851         TCGA-BR-7901 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7957         TCGA-BR-7958         TCGA-BR-7959 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8058         TCGA-BR-8059         TCGA-BR-8060 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8077         TCGA-BR-8078         TCGA-BR-8080 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8286         TCGA-BR-8289 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8291         TCGA-BR-8295         TCGA-BR-8297 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8360         TCGA-BR-8363         TCGA-BR-8364 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8365         TCGA-BR-8368         TCGA-BR-8369 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8370         TCGA-BR-8371         TCGA-BR-8372 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8373         TCGA-BR-8380         TCGA-BR-8381 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8485         TCGA-BR-8486         TCGA-BR-8487 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8588         TCGA-BR-8590         TCGA-BR-8591 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8592         TCGA-BR-8676         TCGA-BR-8677 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8678         TCGA-BR-8679         TCGA-BR-8680 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8682         TCGA-BR-8683         TCGA-BR-8687 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8690         TCGA-BR-A44T         TCGA-BR-A452 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A453         TCGA-BR-A4CQ         TCGA-BR-A4CR 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4CS         TCGA-BR-A4IU         TCGA-BR-A4IV 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4IY         TCGA-BR-A4IZ         TCGA-BR-A4J1 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4J5         TCGA-BR-A4J6         TCGA-BR-A4J7 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4J8         TCGA-BR-A4PD         TCGA-BR-A4QI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4QL         TCGA-BR-A4QM         TCGA-CD-5798 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-5799         TCGA-CD-5800         TCGA-CD-5801 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-5802         TCGA-CD-5803         TCGA-CD-5804 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-5813         TCGA-CD-8524         TCGA-CD-8525 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8526         TCGA-CD-8527         TCGA-CD-8529 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8530         TCGA-CD-8531         TCGA-CD-8532 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8533         TCGA-CD-8534         TCGA-CD-8535 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8536         TCGA-CD-A486         TCGA-CD-A487 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-A489         TCGA-CD-A48C         TCGA-CD-A4MG 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-A4MH         TCGA-CD-A4MI         TCGA-CG-4437 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-4441         TCGA-CG-4449         TCGA-CG-5716 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5717         TCGA-CG-5718         TCGA-CG-5719 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5720         TCGA-CG-5721         TCGA-CG-5722 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5723         TCGA-CG-5724         TCGA-CG-5725 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5726         TCGA-CG-5727         TCGA-CG-5728 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5730         TCGA-CG-5732         TCGA-CG-5733 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5734         TCGA-D7-5577         TCGA-D7-5578 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-5579         TCGA-D7-6518         TCGA-D7-6519 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6520         TCGA-D7-6521         TCGA-D7-6522 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6524         TCGA-D7-6525         TCGA-D7-6526 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6527         TCGA-D7-6528         TCGA-D7-6815 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6817         TCGA-D7-6818         TCGA-D7-6820 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6822         TCGA-D7-8570         TCGA-D7-8572 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-8574         TCGA-D7-8575         TCGA-D7-8576 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-8578         TCGA-D7-8579         TCGA-D7-A4YT 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A4YU         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A6ET         TCGA-D7-A6EV         TCGA-D7-A6EX 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A6EY         TCGA-D7-A6EZ         TCGA-D7-A6F0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A6F2         TCGA-D7-A747         TCGA-D7-A748 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A74A         TCGA-D7-A74B         TCGA-EQ-5647 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-F1-6177         TCGA-F1-6874 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-F1-6875         TCGA-F1-A448         TCGA-FP-7735 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-FP-7829         TCGA-FP-7998         TCGA-FP-8099 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-FP-8209         TCGA-FP-8210         TCGA-FP-8211 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-FP-8631         TCGA-FP-A4BE         TCGA-FP-A9TM 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HF-7131         TCGA-HF-7132         TCGA-HF-7134 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HF-7136         TCGA-HU-8238         TCGA-HU-8243 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-8602         TCGA-HU-8604         TCGA-HU-8608 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4G3         TCGA-HU-A4G8         TCGA-HU-A4GC 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4GD         TCGA-HU-A4GF         TCGA-HU-A4GH 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4GJ         TCGA-HU-A4GN         TCGA-HU-A4GQ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4GT         TCGA-HU-A4GX         TCGA-HU-A4GY 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H4         TCGA-HU-A4H5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4H6         TCGA-HU-A4H8         TCGA-HU-A4HB 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IC-A6RE         TCGA-IC-A6RF         TCGA-IG-A3I8 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A3QL         TCGA-IG-A3Y9         TCGA-IG-A3YA 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A3YB         TCGA-IG-A3YC         TCGA-IG-A4P3 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A4QS         TCGA-IG-A4QT         TCGA-IG-A50L 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A51D         TCGA-IG-A5B8         TCGA-IG-A5S3 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A625         TCGA-IG-A6QS         TCGA-IG-A7DP 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A8O2         TCGA-IG-A97H         TCGA-IG-A97I 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-7806         TCGA-IN-7808         TCGA-IN-8462 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-8663         TCGA-IN-A6RI         TCGA-IN-A6RJ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-A6RL         TCGA-IN-A6RN         TCGA-IN-A6RP 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-A7NR         TCGA-IN-A7NT         TCGA-IN-A7NU 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-AB1V         TCGA-IN-AB1X         TCGA-IP-7968 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A6F8         TCGA-JY-A6FA         TCGA-JY-A6FB 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A6FD         TCGA-JY-A6FE         TCGA-JY-A6FG 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A6FH         TCGA-JY-A938         TCGA-JY-A939 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A93C         TCGA-JY-A93D         TCGA-JY-A93E 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-KB-A6F5         TCGA-KB-A6F7         TCGA-KB-A93J 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-KH-A6WC         TCGA-L5-A43C         TCGA-L5-A43E 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OM         TCGA-L5-A4ON         TCGA-L5-A4OO 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OP         TCGA-L5-A4OQ         TCGA-L5-A4OR 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OS         TCGA-L5-A4OT         TCGA-L5-A4OU 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OW         TCGA-L5-A4OX         TCGA-L5-A88S 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A88T         TCGA-L5-A88V         TCGA-L5-A88W 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A88Y         TCGA-L5-A88Z         TCGA-L5-A891 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A893         TCGA-L5-A8NE         TCGA-L5-A8NF 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NG         TCGA-L5-A8NH         TCGA-L5-A8NI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NJ         TCGA-L5-A8NK         TCGA-L5-A8NL 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NM         TCGA-L5-A8NN         TCGA-L5-A8NQ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NR         TCGA-L5-A8NS         TCGA-L5-A8NT 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NU         TCGA-L5-A8NV         TCGA-L5-A8NW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L7-A56G         TCGA-L7-A6VZ         TCGA-LN-A49K 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49L         TCGA-LN-A49M         TCGA-LN-A49N 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49O         TCGA-LN-A49P         TCGA-LN-A49R 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49S         TCGA-LN-A49U         TCGA-LN-A49W 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A4         TCGA-LN-A4A5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A4A6         TCGA-LN-A4A8         TCGA-LN-A4A9 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A4MQ         TCGA-LN-A4MR         TCGA-LN-A5U5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A5U6         TCGA-LN-A5U7         TCGA-LN-A7HV 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-MX-A5UJ         TCGA-MX-A663 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-MX-A666         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R5-A7O7         TCGA-R5-A7ZE         TCGA-R5-A7ZF 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R5-A7ZI         TCGA-R5-A7ZR         TCGA-R5-A804 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R5-A805         TCGA-R6-A6DN         TCGA-R6-A6DQ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A6KZ         TCGA-R6-A6L4         TCGA-R6-A6L6 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A6XG         TCGA-R6-A6XQ         TCGA-R6-A6Y0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A6Y2         TCGA-R6-A8W5         TCGA-R6-A8W8 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A8WG         TCGA-RD-A7BS         TCGA-RD-A7BW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-RD-A7C1         TCGA-RD-A8MV         TCGA-RD-A8MW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-RD-A8N0         TCGA-RD-A8N1         TCGA-RD-A8N5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-RD-A8N6         TCGA-RD-A8N9         TCGA-RE-A7BO 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-S8-A6BV         TCGA-S8-A6BW         TCGA-SW-A7EA 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-SW-A7EB         TCGA-V5-A7RB         TCGA-V5-A7RC 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-V5-A7RE         TCGA-V5-AASW         TCGA-V5-AASX 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8DL         TCGA-VQ-A8DU         TCGA-VQ-A8DV 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8E2         TCGA-VQ-A8E7         TCGA-VQ-A8P2 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8P3         TCGA-VQ-A8PE         TCGA-VQ-A8PK 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8PM         TCGA-VQ-A8PQ         TCGA-VQ-A91Q 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A91U         TCGA-VQ-A91V         TCGA-VQ-A92D 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A94T         TCGA-VQ-AA64         TCGA-VQ-AA68 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-AA69         TCGA-VQ-AA6A         TCGA-VQ-AA6B 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-AA6F         TCGA-VQ-AA6G         TCGA-VQ-AA6I 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-AA6J         TCGA-VQ-AA6K         TCGA-VR-A8EO 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8EP         TCGA-VR-A8EQ         TCGA-VR-A8ER 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8ET         TCGA-VR-A8EU         TCGA-VR-A8EW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8EX         TCGA-VR-A8EY         TCGA-VR-A8EZ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8Q7         TCGA-VR-AA4D         TCGA-VR-AA4G 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-AA7B         TCGA-VR-AA7D         TCGA-VR-AA7I 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-X8-AAAR         TCGA-XP-A8T6         TCGA-XP-A8T7 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-XP-A8T8         TCGA-Z6-A8JD         TCGA-Z6-A8JE 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-Z6-A9VB         TCGA-Z6-AAPN         TCGA-ZA-A8F6 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-ZR-A9CJ 
"CDC42EP1 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC42EP1 MUTATED        0      1      1      0      0
  CDC42EP1 WILD-TYPE     48    108    129    101     92
D586V10, multiclass
[1] "Remove cluster labels:" "CDC42EP1 MUTATED"      
clus
  CDC42EP1 MUTATED CDC42EP1 WILD-TYPE 
                 2                478 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7717 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7723         TCGA-BR-7851         TCGA-BR-7901 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-7957         TCGA-BR-7958         TCGA-BR-7959 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8058         TCGA-BR-8059         TCGA-BR-8060 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8077         TCGA-BR-8078         TCGA-BR-8080 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8284         TCGA-BR-8286         TCGA-BR-8289 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8291         TCGA-BR-8295         TCGA-BR-8297 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8360         TCGA-BR-8363         TCGA-BR-8364 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8365         TCGA-BR-8368         TCGA-BR-8369 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8370         TCGA-BR-8371         TCGA-BR-8372 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8373         TCGA-BR-8380         TCGA-BR-8381 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8485         TCGA-BR-8486         TCGA-BR-8487 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8588         TCGA-BR-8590         TCGA-BR-8591 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8592         TCGA-BR-8676         TCGA-BR-8677 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8678         TCGA-BR-8679         TCGA-BR-8680 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8682         TCGA-BR-8683         TCGA-BR-8687 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-8690         TCGA-BR-A44T         TCGA-BR-A452 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A453         TCGA-BR-A4CQ         TCGA-BR-A4CR 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4CS         TCGA-BR-A4IU         TCGA-BR-A4IV 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4IY         TCGA-BR-A4IZ         TCGA-BR-A4J1 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4J5         TCGA-BR-A4J6         TCGA-BR-A4J7 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4J8         TCGA-BR-A4PD         TCGA-BR-A4QI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-BR-A4QL         TCGA-BR-A4QM         TCGA-CD-5798 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-5799         TCGA-CD-5800         TCGA-CD-5801 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-5802         TCGA-CD-5803         TCGA-CD-5804 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-5813         TCGA-CD-8524         TCGA-CD-8525 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8526         TCGA-CD-8527         TCGA-CD-8529 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8530         TCGA-CD-8531         TCGA-CD-8532 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8533         TCGA-CD-8534         TCGA-CD-8535 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-8536         TCGA-CD-A486         TCGA-CD-A487 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-A489         TCGA-CD-A48C         TCGA-CD-A4MG 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CD-A4MH         TCGA-CD-A4MI         TCGA-CG-4437 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-4441         TCGA-CG-4449         TCGA-CG-5716 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5717         TCGA-CG-5718         TCGA-CG-5719 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5720         TCGA-CG-5721         TCGA-CG-5722 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5723         TCGA-CG-5724         TCGA-CG-5725 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5726         TCGA-CG-5727         TCGA-CG-5728 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5730         TCGA-CG-5732         TCGA-CG-5733 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-CG-5734         TCGA-D7-5577         TCGA-D7-5578 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-5579         TCGA-D7-6518         TCGA-D7-6519 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6520         TCGA-D7-6521         TCGA-D7-6522 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6524         TCGA-D7-6525         TCGA-D7-6526 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6527         TCGA-D7-6528         TCGA-D7-6815 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6817         TCGA-D7-6818         TCGA-D7-6820 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-6822         TCGA-D7-8570         TCGA-D7-8572 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-8574         TCGA-D7-8575         TCGA-D7-8576 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-8578         TCGA-D7-8579         TCGA-D7-A4YT 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A4YU         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A6ET         TCGA-D7-A6EV         TCGA-D7-A6EX 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A6EY         TCGA-D7-A6EZ         TCGA-D7-A6F0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A6F2         TCGA-D7-A747         TCGA-D7-A748 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-D7-A74A         TCGA-D7-A74B         TCGA-EQ-5647 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-F1-6177         TCGA-F1-6874 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-F1-6875         TCGA-F1-A448         TCGA-FP-7735 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-FP-7829         TCGA-FP-7998         TCGA-FP-8099 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-FP-8209         TCGA-FP-8210         TCGA-FP-8211 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-FP-8631         TCGA-FP-A4BE         TCGA-FP-A9TM 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HF-7131         TCGA-HF-7132         TCGA-HF-7134 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HF-7136         TCGA-HU-8238         TCGA-HU-8243 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-8602         TCGA-HU-8604         TCGA-HU-8608 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4G3         TCGA-HU-A4G8         TCGA-HU-A4GC 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4GD         TCGA-HU-A4GF         TCGA-HU-A4GH 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4GJ         TCGA-HU-A4GN         TCGA-HU-A4GQ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4GT         TCGA-HU-A4GX         TCGA-HU-A4GY 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H4         TCGA-HU-A4H5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-HU-A4H6         TCGA-HU-A4H8         TCGA-HU-A4HB 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IC-A6RE         TCGA-IC-A6RF         TCGA-IG-A3I8 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A3QL         TCGA-IG-A3Y9         TCGA-IG-A3YA 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A3YB         TCGA-IG-A3YC         TCGA-IG-A4P3 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A4QS         TCGA-IG-A4QT         TCGA-IG-A50L 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A51D         TCGA-IG-A5B8         TCGA-IG-A5S3 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A625         TCGA-IG-A6QS         TCGA-IG-A7DP 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IG-A8O2         TCGA-IG-A97H         TCGA-IG-A97I 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-7806         TCGA-IN-7808         TCGA-IN-8462 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-8663         TCGA-IN-A6RI         TCGA-IN-A6RJ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-A6RL         TCGA-IN-A6RN         TCGA-IN-A6RP 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-A7NR         TCGA-IN-A7NT         TCGA-IN-A7NU 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-IN-AB1V         TCGA-IN-AB1X         TCGA-IP-7968 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A6F8         TCGA-JY-A6FA         TCGA-JY-A6FB 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A6FD         TCGA-JY-A6FE         TCGA-JY-A6FG 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A6FH         TCGA-JY-A938         TCGA-JY-A939 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-JY-A93C         TCGA-JY-A93D         TCGA-JY-A93E 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-KB-A6F5         TCGA-KB-A6F7         TCGA-KB-A93J 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-KH-A6WC         TCGA-L5-A43C         TCGA-L5-A43E 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OM         TCGA-L5-A4ON         TCGA-L5-A4OO 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OP         TCGA-L5-A4OQ         TCGA-L5-A4OR 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OS         TCGA-L5-A4OT         TCGA-L5-A4OU 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A4OW         TCGA-L5-A4OX         TCGA-L5-A88S 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A88T         TCGA-L5-A88V         TCGA-L5-A88W 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A88Y         TCGA-L5-A88Z         TCGA-L5-A891 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A893         TCGA-L5-A8NE         TCGA-L5-A8NF 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NG         TCGA-L5-A8NH         TCGA-L5-A8NI 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NJ         TCGA-L5-A8NK         TCGA-L5-A8NL 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NM         TCGA-L5-A8NN         TCGA-L5-A8NQ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NR         TCGA-L5-A8NS         TCGA-L5-A8NT 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L5-A8NU         TCGA-L5-A8NV         TCGA-L5-A8NW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-L7-A56G         TCGA-L7-A6VZ         TCGA-LN-A49K 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49L         TCGA-LN-A49M         TCGA-LN-A49N 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49O         TCGA-LN-A49P         TCGA-LN-A49R 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49S         TCGA-LN-A49U         TCGA-LN-A49W 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A4         TCGA-LN-A4A5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A4A6         TCGA-LN-A4A8         TCGA-LN-A4A9 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A4MQ         TCGA-LN-A4MR         TCGA-LN-A5U5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A5U6         TCGA-LN-A5U7         TCGA-LN-A7HV 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-MX-A5UJ         TCGA-MX-A663 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-MX-A666         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R5-A7O7         TCGA-R5-A7ZE         TCGA-R5-A7ZF 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R5-A7ZI         TCGA-R5-A7ZR         TCGA-R5-A804 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R5-A805         TCGA-R6-A6DN         TCGA-R6-A6DQ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A6KZ         TCGA-R6-A6L4         TCGA-R6-A6L6 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A6XG         TCGA-R6-A6XQ         TCGA-R6-A6Y0 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A6Y2         TCGA-R6-A8W5         TCGA-R6-A8W8 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-R6-A8WG         TCGA-RD-A7BS         TCGA-RD-A7BW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-RD-A7C1         TCGA-RD-A8MV         TCGA-RD-A8MW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-RD-A8N0         TCGA-RD-A8N1         TCGA-RD-A8N5 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-RD-A8N6         TCGA-RD-A8N9         TCGA-RE-A7BO 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-S8-A6BV         TCGA-S8-A6BW         TCGA-SW-A7EA 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-SW-A7EB         TCGA-V5-A7RB         TCGA-V5-A7RC 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-V5-A7RE         TCGA-V5-AASW         TCGA-V5-AASX 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8DL         TCGA-VQ-A8DU         TCGA-VQ-A8DV 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8E2         TCGA-VQ-A8E7         TCGA-VQ-A8P2 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8P3         TCGA-VQ-A8PE         TCGA-VQ-A8PK 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A8PM         TCGA-VQ-A8PQ         TCGA-VQ-A91Q 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A91U         TCGA-VQ-A91V         TCGA-VQ-A92D 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-A94T         TCGA-VQ-AA64         TCGA-VQ-AA68 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-AA69         TCGA-VQ-AA6A         TCGA-VQ-AA6B 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-AA6F         TCGA-VQ-AA6G         TCGA-VQ-AA6I 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VQ-AA6J         TCGA-VQ-AA6K         TCGA-VR-A8EO 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8EP         TCGA-VR-A8EQ         TCGA-VR-A8ER 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8ET         TCGA-VR-A8EU         TCGA-VR-A8EW 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8EX         TCGA-VR-A8EY         TCGA-VR-A8EZ 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-A8Q7         TCGA-VR-AA4D         TCGA-VR-AA4G 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-VR-AA7B         TCGA-VR-AA7D         TCGA-VR-AA7I 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-X8-AAAR         TCGA-XP-A8T6         TCGA-XP-A8T7 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-XP-A8T8         TCGA-Z6-A8JD         TCGA-Z6-A8JE 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-Z6-A9VB         TCGA-Z6-AAPN         TCGA-ZA-A8F6 
"CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" "CDC42EP1 WILD-TYPE" 
        TCGA-ZR-A9CJ 
"CDC42EP1 WILD-TYPE" 

Clustering(587) Variable = KCTD3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCTD3 MUTATED        1      0      2     12
  KCTD3 WILD-TYPE    134     92    170    164
D587V1, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD3 MUTATED        9      1      1
  KCTD3 WILD-TYPE    206    154    161
D587V2, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCTD3 MUTATED        6      4      3      0
  KCTD3 WILD-TYPE    129    120    122     60
D587V3, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD3 MUTATED       10      0      3
  KCTD3 WILD-TYPE    243    102     86
D587V4, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             0             102
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD3 MUTATED        2      7      4
  KCTD3 WILD-TYPE    162    240    139
D587V5, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD3 MUTATED        2      5      3      1      2
  KCTD3 WILD-TYPE    119     99     88    120    115
D587V6, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             5              99
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD3 MUTATED        2      9      4
  KCTD3 WILD-TYPE    157    242    161
D587V7, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             9             242
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD3 MUTATED        3      4      5      2      1
  KCTD3 WILD-TYPE    115    127    146     92     80
D587V8, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD3 MUTATED        0      3      2      3      2
  KCTD3 WILD-TYPE    118    133    113     37     69
D587V9, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD3 MUTATED        0      2      3      3      2
  KCTD3 WILD-TYPE     48    107    127     98     90
D587V10, multiclass
        clus
vv       KCTD3 MUTATED KCTD3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(588) Variable = NHLRC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NHLRC1 MUTATED        1      0      0     11
  NHLRC1 WILD-TYPE    134     92    172    165
D588V1, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NHLRC1 MUTATED        5      1      2
  NHLRC1 WILD-TYPE    210    154    160
D588V2, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NHLRC1 MUTATED        6      4      1      0
  NHLRC1 WILD-TYPE    129    120    124     60
D588V3, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NHLRC1 MUTATED        6      4      1
  NHLRC1 WILD-TYPE    247     98     88
D588V4, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NHLRC1 MUTATED        1      6      4
  NHLRC1 WILD-TYPE    163    241    139
D588V5, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NHLRC1 MUTATED        2      2      4      0      3
  NHLRC1 WILD-TYPE    119    102     87    121    114
D588V6, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NHLRC1 MUTATED        0     10      2
  NHLRC1 WILD-TYPE    159    241    163
D588V7, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2             10              241
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NHLRC1 MUTATED        2      2      6      0      2
  NHLRC1 WILD-TYPE    116    129    145     94     79
D588V8, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              2              129
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NHLRC1 MUTATED        1      1      1      1      3
  NHLRC1 WILD-TYPE    117    135    114     39     68
D588V9, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NHLRC1 MUTATED        1      1      4      1      0
  NHLRC1 WILD-TYPE     47    108    126    100     92
D588V10, multiclass
        clus
vv       NHLRC1 MUTATED NHLRC1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(589) Variable = RNASEH2B MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNASEH2B MUTATED        0      1      1      2
  RNASEH2B WILD-TYPE    135     91    171    174
D589V1, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                1                171
  CLUS_4                2                174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RNASEH2B MUTATED        3      1      0
  RNASEH2B WILD-TYPE    212    154    162
D589V2, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                3                212
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RNASEH2B MUTATED        2      1      1      0
  RNASEH2B WILD-TYPE    133    123    124     60
D589V3, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                123
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RNASEH2B MUTATED        2      1      1
  RNASEH2B WILD-TYPE    251    101     88
D589V4, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                2                251
  CLUS_2                1                101
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RNASEH2B MUTATED        0      2      2
  RNASEH2B WILD-TYPE    164    245    141
D589V5, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                164
  CLUS_2                2                245
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNASEH2B MUTATED        0      1      2      0      1
  RNASEH2B WILD-TYPE    121    103     89    121    116
D589V6, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                2                 89
  CLUS_4                0                121
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  RNASEH2B MUTATED        0      3      1
  RNASEH2B WILD-TYPE    159    248    164
D589V7, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                159
  CLUS_2                3                248
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNASEH2B MUTATED        0      1      2      0      1
  RNASEH2B WILD-TYPE    118    130    149     94     80
D589V8, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                130
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNASEH2B MUTATED        0      1      1      0      1
  RNASEH2B WILD-TYPE    118    135    114     40     70
D589V9, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                135
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RNASEH2B MUTATED        0      0      2      1      0
  RNASEH2B WILD-TYPE     48    109    128    100     92
D589V10, multiclass
        clus
vv       RNASEH2B MUTATED RNASEH2B WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                0                109
  CLUS_3                2                128
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(590) Variable = HRNR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HRNR MUTATED        6     10     15     17
  HRNR WILD-TYPE    129     82    157    159
D590V1, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1            6            129
  CLUS_2           10             82
  CLUS_3           15            157
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HRNR MUTATED       25     14      6
  HRNR WILD-TYPE    190    141    156
D590V2, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1           25            190
  CLUS_2           14            141
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HRNR MUTATED       18     10     10      0
  HRNR WILD-TYPE    117    114    115     60
D590V3, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1           18            117
  CLUS_2           10            114
  CLUS_3           10            115
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HRNR MUTATED       26      6      6
  HRNR WILD-TYPE    227     96     83
D590V4, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1           26            227
  CLUS_2            6             96
  CLUS_3            6             83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HRNR MUTATED       10     29     11
  HRNR WILD-TYPE    154    218    132
D590V5, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1           10            154
  CLUS_2           29            218
  CLUS_3           11            132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HRNR MUTATED        7     14     15      5      9
  HRNR WILD-TYPE    114     90     76    116    108
D590V6, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1            7            114
  CLUS_2           14             90
  CLUS_3           15             76
  CLUS_4            5            116
  CLUS_5            9            108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HRNR MUTATED        6     32     12
  HRNR WILD-TYPE    153    219    153
D590V7, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1            6            153
  CLUS_2           32            219
  CLUS_3           12            153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HRNR MUTATED        8     17     16      3      6
  HRNR WILD-TYPE    110    114    135     91     75
D590V8, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1            8            110
  CLUS_2           17            114
  CLUS_3           16            135
  CLUS_4            3             91
  CLUS_5            6             75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HRNR MUTATED        5     18      9      4      8
  HRNR WILD-TYPE    113    118    106     36     63
D590V9, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1            5            113
  CLUS_2           18            118
  CLUS_3            9            106
  CLUS_4            4             36
  CLUS_5            8             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HRNR MUTATED        4     13     17      7      3
  HRNR WILD-TYPE     44     96    113     94     89
D590V10, multiclass
        clus
vv       HRNR MUTATED HRNR WILD-TYPE
  CLUS_1            4             44
  CLUS_2           13             96
  CLUS_3           17            113
  CLUS_4            7             94
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(591) Variable = RDBP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RDBP MUTATED        2      1      1      9
  RDBP WILD-TYPE    133     91    171    167
D591V1, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RDBP MUTATED        9      1      2
  RDBP WILD-TYPE    206    154    160
D591V2, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            9            206
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RDBP MUTATED        4      8      0      0
  RDBP WILD-TYPE    131    116    125     60
D591V3, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            4            131
  CLUS_2            8            116
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RDBP MUTATED        7      4      1
  RDBP WILD-TYPE    246     98     88
D591V4, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            7            246
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RDBP MUTATED        2      8      3
  RDBP WILD-TYPE    162    239    140
D591V5, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RDBP MUTATED        0      1      7      2      3
  RDBP WILD-TYPE    121    103     84    119    114
D591V6, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            7             84
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RDBP MUTATED        3      7      3
  RDBP WILD-TYPE    156    244    162
D591V7, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            3            156
  CLUS_2            7            244
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RDBP MUTATED        0      6      4      2      1
  RDBP WILD-TYPE    118    125    147     92     80
D591V8, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RDBP MUTATED        2      4      3      1      1
  RDBP WILD-TYPE    116    132    112     39     70
D591V9, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RDBP MUTATED        0      5      3      1      2
  RDBP WILD-TYPE     48    104    127    100     90
D591V10, multiclass
        clus
vv       RDBP MUTATED RDBP WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(592) Variable = TNFSF13 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF13 MUTATED        0      0      0      3
  TNFSF13 WILD-TYPE    135     92    172    173
D592V1, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF13 MUTATED        2      0      1
  TNFSF13 WILD-TYPE    213    155    161
D592V2, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFSF13 MUTATED        0      2      0      0
  TNFSF13 WILD-TYPE    135    122    125     60
D592V3, multiclass
[1] "Remove cluster labels:" "TNFSF13 MUTATED"       
clus
  TNFSF13 MUTATED TNFSF13 WILD-TYPE 
                2               442 
       TCGA-2H-A9GF        TCGA-2H-A9GI        TCGA-2H-A9GL        TCGA-2H-A9GQ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-2H-A9GR        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4183        TCGA-BR-4184 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4187        TCGA-BR-4188        TCGA-BR-4191        TCGA-BR-4201 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256        TCGA-BR-4257 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280        TCGA-BR-4292 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361        TCGA-BR-4362 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368        TCGA-BR-4369 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452        TCGA-BR-6453 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6564        TCGA-BR-6565        TCGA-BR-6566 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707        TCGA-BR-6709 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802        TCGA-BR-6803 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197        TCGA-BR-7703 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-7704        TCGA-BR-7715        TCGA-BR-7716        TCGA-BR-7717 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-7722        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8080        TCGA-BR-8081 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8380 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486        TCGA-BR-8588 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8589        TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8676        TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8680        TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2        TCGA-BR-A4J4 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7        TCGA-BR-A4J8 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF        TCGA-BR-A4QI 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4300        TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4306        TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4455        TCGA-CG-4460        TCGA-CG-4465        TCGA-CG-4466 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5724 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727        TCGA-CG-5728 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733        TCGA-CG-5734 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579        TCGA-D7-6518 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521        TCGA-D7-6522 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6527        TCGA-D7-6528 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818        TCGA-D7-6820 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572        TCGA-D7-8573 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8578        TCGA-D7-A4YT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX        TCGA-D7-A4YY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A748        TCGA-EQ-8122 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7916        TCGA-FP-7998 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133        TCGA-HF-7134 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HF-7136        TCGA-HF-A5NB        TCGA-HJ-7597        TCGA-HU-8602 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4GF        TCGA-HU-A4GQ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A8O2        TCGA-IG-A97H 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RL        TCGA-IN-A6RN 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A939 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A93G 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88W        TCGA-L5-A891        TCGA-L5-A8NE 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A8NF        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NQ        TCGA-L5-A8NS        TCGA-L5-A8NT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HW        TCGA-LN-A7HX 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-Q9-A6FU 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-VQ-A8DL        TCGA-VQ-A8DT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-AA64        TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-AA6F        TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6K 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8Q7 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VR-AA4D        TCGA-VR-AA7B        TCGA-X8-AAAR        TCGA-XP-A8T6 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-XP-A8T7        TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-Z6-AAPN        TCGA-ZA-A8F6 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF13 MUTATED        0      2      0
  TNFSF13 WILD-TYPE    253    100     89
D592V4, multiclass
[1] "Remove cluster labels:" "TNFSF13 MUTATED"       
clus
  TNFSF13 MUTATED TNFSF13 WILD-TYPE 
                2               442 
       TCGA-2H-A9GF        TCGA-2H-A9GI        TCGA-2H-A9GL        TCGA-2H-A9GQ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-2H-A9GR        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4183        TCGA-BR-4184 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4187        TCGA-BR-4188        TCGA-BR-4191        TCGA-BR-4201 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256        TCGA-BR-4257 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280        TCGA-BR-4292 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361        TCGA-BR-4362 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368        TCGA-BR-4369 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452        TCGA-BR-6453 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6564        TCGA-BR-6565        TCGA-BR-6566 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707        TCGA-BR-6709 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802        TCGA-BR-6803 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197        TCGA-BR-7703 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-7704        TCGA-BR-7715        TCGA-BR-7716        TCGA-BR-7717 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-7722        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8080        TCGA-BR-8081 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8380 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486        TCGA-BR-8588 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8589        TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8676        TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8680        TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2        TCGA-BR-A4J4 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7        TCGA-BR-A4J8 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF        TCGA-BR-A4QI 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4300        TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4306        TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4455        TCGA-CG-4460        TCGA-CG-4465        TCGA-CG-4466 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5724 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727        TCGA-CG-5728 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733        TCGA-CG-5734 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579        TCGA-D7-6518 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521        TCGA-D7-6522 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6527        TCGA-D7-6528 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818        TCGA-D7-6820 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572        TCGA-D7-8573 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8578        TCGA-D7-A4YT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX        TCGA-D7-A4YY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A748        TCGA-EQ-8122 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7916        TCGA-FP-7998 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133        TCGA-HF-7134 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HF-7136        TCGA-HF-A5NB        TCGA-HJ-7597        TCGA-HU-8602 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4GF        TCGA-HU-A4GQ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A8O2        TCGA-IG-A97H 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RL        TCGA-IN-A6RN 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A939 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A93G 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88W        TCGA-L5-A891        TCGA-L5-A8NE 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A8NF        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NQ        TCGA-L5-A8NS        TCGA-L5-A8NT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HW        TCGA-LN-A7HX 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-Q9-A6FU 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-VQ-A8DL        TCGA-VQ-A8DT 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-AA64        TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VQ-AA6F        TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6K 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8Q7 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-VR-AA4D        TCGA-VR-AA7B        TCGA-X8-AAAR        TCGA-XP-A8T6 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-XP-A8T7        TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
       TCGA-Z6-AAPN        TCGA-ZA-A8F6 
"TNFSF13 WILD-TYPE" "TNFSF13 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF13 MUTATED        1      1      1
  TNFSF13 WILD-TYPE    163    246    142
D592V5, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               1               246
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF13 MUTATED        0      1      0      0      2
  TNFSF13 WILD-TYPE    121    103     91    121    115
D592V6, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               0                91
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TNFSF13 MUTATED        0      2      1
  TNFSF13 WILD-TYPE    159    249    164
D592V7, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               2               249
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF13 MUTATED        0      1      2      0      0
  TNFSF13 WILD-TYPE    118    130    149     94     81
D592V8, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               130
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF13 MUTATED        0      1      0      0      2
  TNFSF13 WILD-TYPE    118    135    115     40     69
D592V9, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFSF13 MUTATED        0      1      2      0      0
  TNFSF13 WILD-TYPE     48    108    128    101     92
D592V10, multiclass
        clus
vv       TNFSF13 MUTATED TNFSF13 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(593) Variable = MCEE MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCEE MUTATED        0      0      1      5
  MCEE WILD-TYPE    135     92    171    171
D593V1, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCEE MUTATED        2      1      0
  MCEE WILD-TYPE    213    154    162
D593V2, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            2            213
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCEE MUTATED        2      3      1      0
  MCEE WILD-TYPE    133    121    124     60
D593V3, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCEE MUTATED        2      3      1
  MCEE WILD-TYPE    251     99     88
D593V4, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            2            251
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCEE MUTATED        1      3      2
  MCEE WILD-TYPE    163    244    141
D593V5, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCEE MUTATED        0      2      2      1      1
  MCEE WILD-TYPE    121    102     89    120    116
D593V6, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MCEE MUTATED        1      5      0
  MCEE WILD-TYPE    158    246    165
D593V7, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCEE MUTATED        1      1      2      1      1
  MCEE WILD-TYPE    117    130    149     93     80
D593V8, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            130
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCEE MUTATED        1      0      0      0      2
  MCEE WILD-TYPE    117    136    115     40     69
D593V9, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            1            117
  CLUS_2            0            136
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCEE MUTATED        0      0      2      0      1
  MCEE WILD-TYPE     48    109    128    101     91
D593V10, multiclass
        clus
vv       MCEE MUTATED MCEE WILD-TYPE
  CLUS_1            0             48
  CLUS_2            0            109
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(594) Variable = OTX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OTX2 MUTATED        1      0      0     10
  OTX2 WILD-TYPE    134     92    172    166
D594V1, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OTX2 MUTATED        7      0      1
  OTX2 WILD-TYPE    208    155    161
D594V2, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OTX2 MUTATED        4      4      1      0
  OTX2 WILD-TYPE    131    120    124     60
D594V3, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            4            120
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OTX2 MUTATED        5      3      1
  OTX2 WILD-TYPE    248     99     88
D594V4, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OTX2 MUTATED        1      7      3
  OTX2 WILD-TYPE    163    240    140
D594V5, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTX2 MUTATED        0      3      5      0      3
  OTX2 WILD-TYPE    121    101     86    121    114
D594V6, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  OTX2 MUTATED        0      8      3
  OTX2 WILD-TYPE    159    243    162
D594V7, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTX2 MUTATED        0      6      5      0      0
  OTX2 WILD-TYPE    118    125    146     94     81
D594V8, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTX2 MUTATED        0      5      0      1      2
  OTX2 WILD-TYPE    118    131    115     39     69
D594V9, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTX2 MUTATED        0      6      2      0      0
  OTX2 WILD-TYPE     48    103    128    101     92
D594V10, multiclass
        clus
vv       OTX2 MUTATED OTX2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(595) Variable = HAND2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAND2 MUTATED        0      1      2      4
  HAND2 WILD-TYPE    135     91    170    172
D595V1, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAND2 MUTATED        5      1      0
  HAND2 WILD-TYPE    210    154    162
D595V2, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAND2 MUTATED        3      3      0      0
  HAND2 WILD-TYPE    132    121    125     60
D595V3, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAND2 MUTATED        4      2      0
  HAND2 WILD-TYPE    249    100     89
D595V4, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAND2 MUTATED        1      4      2
  HAND2 WILD-TYPE    163    243    141
D595V5, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAND2 MUTATED        1      0      6      0      0
  HAND2 WILD-TYPE    120    104     85    121    117
D595V6, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAND2 MUTATED        0      5      2
  HAND2 WILD-TYPE    159    246    163
D595V7, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAND2 MUTATED        1      3      3      0      0
  HAND2 WILD-TYPE    117    128    148     94     81
D595V8, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAND2 MUTATED        0      2      2      0      1
  HAND2 WILD-TYPE    118    134    113     40     70
D595V9, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAND2 MUTATED        0      2      2      1      0
  HAND2 WILD-TYPE     48    107    128    100     92
D595V10, multiclass
        clus
vv       HAND2 MUTATED HAND2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(596) Variable = SLC12A7 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC12A7 MUTATED        5      1      5     18
  SLC12A7 WILD-TYPE    130     91    167    158
D596V1, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               1                91
  CLUS_3               5               167
  CLUS_4              18               158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A7 MUTATED       19      3      5
  SLC12A7 WILD-TYPE    196    152    157
D596V2, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1              19               196
  CLUS_2               3               152
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC12A7 MUTATED        8      8      1      3
  SLC12A7 WILD-TYPE    127    116    124     57
D596V3, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               8               127
  CLUS_2               8               116
  CLUS_3               1               124
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A7 MUTATED       15      3      2
  SLC12A7 WILD-TYPE    238     99     87
D596V4, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1              15               238
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A7 MUTATED        6     17      6
  SLC12A7 WILD-TYPE    158    230    137
D596V5, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              17               230
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A7 MUTATED        4      8      9      4      4
  SLC12A7 WILD-TYPE    117     96     82    117    113
D596V6, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               4               117
  CLUS_2               8                96
  CLUS_3               9                82
  CLUS_4               4               117
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A7 MUTATED        5     17      8
  SLC12A7 WILD-TYPE    154    234    157
D596V7, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               5               154
  CLUS_2              17               234
  CLUS_3               8               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A7 MUTATED        6     13      7      2      2
  SLC12A7 WILD-TYPE    112    118    144     92     79
D596V8, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               6               112
  CLUS_2              13               118
  CLUS_3               7               144
  CLUS_4               2                92
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A7 MUTATED        3      9      5      2      5
  SLC12A7 WILD-TYPE    115    127    110     38     66
D596V9, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               9               127
  CLUS_3               5               110
  CLUS_4               2                38
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A7 MUTATED        1     10      8      3      2
  SLC12A7 WILD-TYPE     47     99    122     98     90
D596V10, multiclass
        clus
vv       SLC12A7 MUTATED SLC12A7 WILD-TYPE
  CLUS_1               1                47
  CLUS_2              10                99
  CLUS_3               8               122
  CLUS_4               3                98
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(597) Variable = CD1E MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1E MUTATED        6      3      4      4
  CD1E WILD-TYPE    129     89    168    172
D597V1, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            6            129
  CLUS_2            3             89
  CLUS_3            4            168
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1E MUTATED       11      1      3
  CD1E WILD-TYPE    204    154    159
D597V2, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1           11            204
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD1E MUTATED        8      1      2      3
  CD1E WILD-TYPE    127    123    123     57
D597V3, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            8            127
  CLUS_2            1            123
  CLUS_3            2            123
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1E MUTATED       11      1      2
  CD1E WILD-TYPE    242    101     87
D597V4, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1           11            242
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1E MUTATED        4      8      4
  CD1E WILD-TYPE    160    239    139
D597V5, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            4            160
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD1E MUTATED        6      4      2      1      3
  CD1E WILD-TYPE    115    100     89    120    114
D597V6, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            6            115
  CLUS_2            4            100
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD1E MUTATED        4     10      3
  CD1E WILD-TYPE    155    241    162
D597V7, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            4            155
  CLUS_2           10            241
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD1E MUTATED        6      6      3      0      2
  CD1E WILD-TYPE    112    125    148     94     79
D597V8, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            6            112
  CLUS_2            6            125
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD1E MUTATED        2      5      2      3      1
  CD1E WILD-TYPE    116    131    113     37     70
D597V9, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            3             37
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD1E MUTATED        4      4      2      3      0
  CD1E WILD-TYPE     44    105    128     98     92
D597V10, multiclass
        clus
vv       CD1E MUTATED CD1E WILD-TYPE
  CLUS_1            4             44
  CLUS_2            4            105
  CLUS_3            2            128
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(598) Variable = HEXDC MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEXDC MUTATED        0      1      1      7
  HEXDC WILD-TYPE    135     91    171    169
D598V1, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HEXDC MUTATED        4      1      3
  HEXDC WILD-TYPE    211    154    159
D598V2, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HEXDC MUTATED        7      1      0      1
  HEXDC WILD-TYPE    128    123    125     59
D598V3, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             7             128
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HEXDC MUTATED        8      1      0
  HEXDC WILD-TYPE    245    101     89
D598V4, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HEXDC MUTATED        2      6      1
  HEXDC WILD-TYPE    162    241    142
D598V5, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HEXDC MUTATED        1      4      2      1      1
  HEXDC WILD-TYPE    120    100     89    120    116
D598V6, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HEXDC MUTATED        1      6      2
  HEXDC WILD-TYPE    158    245    163
D598V7, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HEXDC MUTATED        0      2      5      1      1
  HEXDC WILD-TYPE    118    129    146     93     80
D598V8, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HEXDC MUTATED        1      3      1      0      2
  HEXDC WILD-TYPE    117    133    114     40     69
D598V9, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HEXDC MUTATED        0      1      4      1      1
  HEXDC WILD-TYPE     48    108    126    100     91
D598V10, multiclass
        clus
vv       HEXDC MUTATED HEXDC WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(599) Variable = C11ORF70 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C11ORF70 MUTATED        1      0      1      3
  C11ORF70 WILD-TYPE    134     92    171    173
D599V1, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                3                173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF70 MUTATED        4      1      0
  C11ORF70 WILD-TYPE    211    154    162
D599V2, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C11ORF70 MUTATED        3      2      0      0
  C11ORF70 WILD-TYPE    132    122    125     60
D599V3, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                2                122
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF70 MUTATED        3      2      0
  C11ORF70 WILD-TYPE    250    100     89
D599V4, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF70 MUTATED        2      2      1
  C11ORF70 WILD-TYPE    162    245    142
D599V5, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                2                245
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF70 MUTATED        0      0      3      1      1
  C11ORF70 WILD-TYPE    121    104     88    120    116
D599V6, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                0                104
  CLUS_3                3                 88
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C11ORF70 MUTATED        1      4      0
  C11ORF70 WILD-TYPE    158    247    165
D599V7, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF70 MUTATED        0      2      2      1      0
  C11ORF70 WILD-TYPE    118    129    149     93     81
D599V8, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                129
  CLUS_3                2                149
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF70 MUTATED        1      0      0      2      1
  C11ORF70 WILD-TYPE    117    136    115     38     70
D599V9, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                0                136
  CLUS_3                0                115
  CLUS_4                2                 38
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C11ORF70 MUTATED        0      1      2      0      1
  C11ORF70 WILD-TYPE     48    108    128    101     91
D599V10, multiclass
        clus
vv       C11ORF70 MUTATED C11ORF70 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(600) Variable = GRXCR1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRXCR1 MUTATED        3      3      5      6
  GRXCR1 WILD-TYPE    132     89    167    170
D600V1, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3               89
  CLUS_3              5              167
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GRXCR1 MUTATED        8      5      4
  GRXCR1 WILD-TYPE    207    150    158
D600V2, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              5              150
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GRXCR1 MUTATED        5      4      2      3
  GRXCR1 WILD-TYPE    130    120    123     57
D600V3, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GRXCR1 MUTATED        8      3      3
  GRXCR1 WILD-TYPE    245     99     86
D600V4, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              3               99
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GRXCR1 MUTATED        5      9      4
  GRXCR1 WILD-TYPE    159    238    139
D600V5, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              9              238
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRXCR1 MUTATED        3      4      3      4      4
  GRXCR1 WILD-TYPE    118    100     88    117    113
D600V6, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              4              100
  CLUS_3              3               88
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GRXCR1 MUTATED        4     10      4
  GRXCR1 WILD-TYPE    155    241    161
D600V7, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             10              241
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRXCR1 MUTATED        3      5      5      4      1
  GRXCR1 WILD-TYPE    115    126    146     90     80
D600V8, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              126
  CLUS_3              5              146
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRXCR1 MUTATED        3      4      4      1      4
  GRXCR1 WILD-TYPE    115    132    111     39     67
D600V9, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              132
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GRXCR1 MUTATED        1      4      5      2      4
  GRXCR1 WILD-TYPE     47    105    125     99     88
D600V10, multiclass
        clus
vv       GRXCR1 MUTATED GRXCR1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(601) Variable = GPR141 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR141 MUTATED        0      1      3      9
  GPR141 WILD-TYPE    135     91    169    167
D601V1, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR141 MUTATED        9      1      2
  GPR141 WILD-TYPE    206    154    160
D601V2, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR141 MUTATED        7      4      1      1
  GPR141 WILD-TYPE    128    120    124     59
D601V3, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR141 MUTATED        9      2      2
  GPR141 WILD-TYPE    244    100     87
D601V4, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR141 MUTATED        2      7      3
  GPR141 WILD-TYPE    162    240    140
D601V5, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR141 MUTATED        1      1      6      1      3
  GPR141 WILD-TYPE    120    103     85    120    114
D601V6, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR141 MUTATED        1     11      1
  GPR141 WILD-TYPE    158    240    164
D601V7, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             11              240
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR141 MUTATED        0      3      8      1      1
  GPR141 WILD-TYPE    118    128    143     93     80
D601V8, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              8              143
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR141 MUTATED        1      3      1      1      4
  GPR141 WILD-TYPE    117    133    114     39     67
D601V9, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR141 MUTATED        0      2      6      1      1
  GPR141 WILD-TYPE     48    107    124    100     91
D601V10, multiclass
        clus
vv       GPR141 MUTATED GPR141 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(602) Variable = NEK8 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEK8 MUTATED        4      0      1      9
  NEK8 WILD-TYPE    131     92    171    167
D602V1, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEK8 MUTATED        7      4      2
  NEK8 WILD-TYPE    208    151    160
D602V2, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            4            151
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEK8 MUTATED        4      8      1      1
  NEK8 WILD-TYPE    131    116    124     59
D602V3, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            8            116
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEK8 MUTATED        6      8      0
  NEK8 WILD-TYPE    247     94     89
D602V4, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            8             94
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEK8 MUTATED        2      7      4
  NEK8 WILD-TYPE    162    240    139
D602V5, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            7            240
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEK8 MUTATED        3      2      5      1      2
  NEK8 WILD-TYPE    118    102     86    120    115
D602V6, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NEK8 MUTATED        3      9      2
  NEK8 WILD-TYPE    156    242    163
D602V7, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEK8 MUTATED        3      2      6      1      2
  NEK8 WILD-TYPE    115    129    145     93     79
D602V8, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            2            129
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEK8 MUTATED        2      3      0      1      5
  NEK8 WILD-TYPE    116    133    115     39     66
D602V9, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEK8 MUTATED        2      3      4      1      1
  NEK8 WILD-TYPE     46    106    126    100     91
D602V10, multiclass
        clus
vv       NEK8 MUTATED NEK8 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(603) Variable = KRT222 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT222 MUTATED        0      1      0      8
  KRT222 WILD-TYPE    135     91    172    168
D603V1, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KRT222 MUTATED        5      2      0
  KRT222 WILD-TYPE    210    153    162
D603V2, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              2              153
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT222 MUTATED        4      1      2      0
  KRT222 WILD-TYPE    131    123    123     60
D603V3, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1              123
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KRT222 MUTATED        5      0      2
  KRT222 WILD-TYPE    248    102     87
D603V4, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              0              102
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KRT222 MUTATED        1      5      2
  KRT222 WILD-TYPE    163    242    141
D603V5, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT222 MUTATED        0      3      2      1      2
  KRT222 WILD-TYPE    121    101     89    120    115
D603V6, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KRT222 MUTATED        2      5      2
  KRT222 WILD-TYPE    157    246    163
D603V7, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT222 MUTATED        1      2      3      1      2
  KRT222 WILD-TYPE    117    129    148     93     79
D603V8, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT222 MUTATED        1      3      1      1      1
  KRT222 WILD-TYPE    117    133    114     39     70
D603V9, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT222 MUTATED        0      3      3      0      1
  KRT222 WILD-TYPE     48    106    127    101     91
D603V10, multiclass
        clus
vv       KRT222 MUTATED KRT222 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(604) Variable = GIMAP7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GIMAP7 MUTATED        0      0      1      5
  GIMAP7 WILD-TYPE    135     92    171    171
D604V1, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIMAP7 MUTATED        6      0      0
  GIMAP7 WILD-TYPE    209    155    162
D604V2, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GIMAP7 MUTATED        3      2      0      1
  GIMAP7 WILD-TYPE    132    122    125     59
D604V3, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIMAP7 MUTATED        6      0      0
  GIMAP7 WILD-TYPE    247    102     89
D604V4, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIMAP7 MUTATED        2      4      0
  GIMAP7 WILD-TYPE    162    243    143
D604V5, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              4              243
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIMAP7 MUTATED        0      2      3      1      0
  GIMAP7 WILD-TYPE    121    102     88    120    117
D604V6, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIMAP7 MUTATED        1      5      0
  GIMAP7 WILD-TYPE    158    246    165
D604V7, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIMAP7 MUTATED        0      2      4      0      0
  GIMAP7 WILD-TYPE    118    129    147     94     81
D604V8, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIMAP7 MUTATED        0      3      0      0      3
  GIMAP7 WILD-TYPE    118    133    115     40     68
D604V9, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIMAP7 MUTATED        0      2      4      0      0
  GIMAP7 WILD-TYPE     48    107    126    101     92
D604V10, multiclass
        clus
vv       GIMAP7 MUTATED GIMAP7 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(605) Variable = PRMT3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRMT3 MUTATED        0      1      4      6
  PRMT3 WILD-TYPE    135     91    168    170
D605V1, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRMT3 MUTATED        5      2      3
  PRMT3 WILD-TYPE    210    153    159
D605V2, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRMT3 MUTATED        3      6      1      0
  PRMT3 WILD-TYPE    132    118    124     60
D605V3, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRMT3 MUTATED        5      4      1
  PRMT3 WILD-TYPE    248     98     88
D605V4, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRMT3 MUTATED        1      8      1
  PRMT3 WILD-TYPE    163    239    142
D605V5, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRMT3 MUTATED        1      2      4      1      2
  PRMT3 WILD-TYPE    120    102     87    120    115
D605V6, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRMT3 MUTATED        1      9      1
  PRMT3 WILD-TYPE    158    242    164
D605V7, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRMT3 MUTATED        1      2      5      1      2
  PRMT3 WILD-TYPE    117    129    146     93     79
D605V8, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRMT3 MUTATED        1      4      1      0      3
  PRMT3 WILD-TYPE    117    132    114     40     68
D605V9, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRMT3 MUTATED        0      4      4      0      1
  PRMT3 WILD-TYPE     48    105    126    101     91
D605V10, multiclass
        clus
vv       PRMT3 MUTATED PRMT3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(606) Variable = C20ORF160 MUTATION ANALYSIS
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C20ORF160 MUTATED        0      2      0      6
  C20ORF160 WILD-TYPE    135     90    172    170
D606V1, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 0                 135
  CLUS_2                 2                  90
  CLUS_3                 0                 172
  CLUS_4                 6                 170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  C20ORF160 MUTATED        5      0      3
  C20ORF160 WILD-TYPE    210    155    159
D606V2, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 5                 210
  CLUS_2                 0                 155
  CLUS_3                 3                 159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C20ORF160 MUTATED        1      3      2      0
  C20ORF160 WILD-TYPE    134    121    123     60
D606V3, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 1                 134
  CLUS_2                 3                 121
  CLUS_3                 2                 123
  CLUS_4                 0                  60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  C20ORF160 MUTATED        2      2      2
  C20ORF160 WILD-TYPE    251    100     87
D606V4, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 2                 251
  CLUS_2                 2                 100
  CLUS_3                 2                  87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  C20ORF160 MUTATED        0      5      3
  C20ORF160 WILD-TYPE    164    242    140
D606V5, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 0                 164
  CLUS_2                 5                 242
  CLUS_3                 3                 140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF160 MUTATED        3      2      3      0      0
  C20ORF160 WILD-TYPE    118    102     88    121    117
D606V6, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 3                 118
  CLUS_2                 2                 102
  CLUS_3                 3                  88
  CLUS_4                 0                 121
  CLUS_5                 0                 117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  C20ORF160 MUTATED        0      6      2
  C20ORF160 WILD-TYPE    159    245    163
D606V7, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 0                 159
  CLUS_2                 6                 245
  CLUS_3                 2                 163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF160 MUTATED        2      2      4      0      0
  C20ORF160 WILD-TYPE    116    129    147     94     81
D606V8, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 2                 116
  CLUS_2                 2                 129
  CLUS_3                 4                 147
  CLUS_4                 0                  94
  CLUS_5                 0                  81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF160 MUTATED        0      2      2      0      3
  C20ORF160 WILD-TYPE    118    134    113     40     68
D606V9, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 0                 118
  CLUS_2                 2                 134
  CLUS_3                 2                 113
  CLUS_4                 0                  40
  CLUS_5                 3                  68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF160 MUTATED        2      2      3      0      0
  C20ORF160 WILD-TYPE     46    107    127    101     92
D606V10, multiclass
        clus
vv       C20ORF160 MUTATED C20ORF160 WILD-TYPE
  CLUS_1                 2                  46
  CLUS_2                 2                 107
  CLUS_3                 3                 127
  CLUS_4                 0                 101
  CLUS_5                 0                  92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(607) Variable = ACTL6A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACTL6A MUTATED        0      0      0      8
  ACTL6A WILD-TYPE    135     92    172    168
D607V1, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACTL6A MUTATED        8      0      0
  ACTL6A WILD-TYPE    207    155    162
D607V2, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACTL6A MUTATED        4      1      1      1
  ACTL6A WILD-TYPE    131    123    124     59
D607V3, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1              123
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACTL6A MUTATED        6      0      1
  ACTL6A WILD-TYPE    247    102     88
D607V4, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              6              247
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACTL6A MUTATED        1      5      2
  ACTL6A WILD-TYPE    163    242    141
D607V5, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTL6A MUTATED        1      3      3      0      1
  ACTL6A WILD-TYPE    120    101     88    121    116
D607V6, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ACTL6A MUTATED        1      6      1
  ACTL6A WILD-TYPE    158    245    164
D607V7, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTL6A MUTATED        0      1      5      1      1
  ACTL6A WILD-TYPE    118    130    146     93     80
D607V8, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTL6A MUTATED        0      3      1      1      3
  ACTL6A WILD-TYPE    118    133    114     39     68
D607V9, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTL6A MUTATED        0      1      5      1      1
  ACTL6A WILD-TYPE     48    108    125    100     91
D607V10, multiclass
        clus
vv       ACTL6A MUTATED ACTL6A WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(608) Variable = PMEPA1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PMEPA1 MUTATED        1      0      0      6
  PMEPA1 WILD-TYPE    134     92    172    170
D608V1, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PMEPA1 MUTATED        4      0      2
  PMEPA1 WILD-TYPE    211    155    160
D608V2, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PMEPA1 MUTATED        2      5      0      0
  PMEPA1 WILD-TYPE    133    119    125     60
D608V3, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PMEPA1 MUTATED        4      2      1
  PMEPA1 WILD-TYPE    249    100     88
D608V4, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PMEPA1 MUTATED        2      2      3
  PMEPA1 WILD-TYPE    162    245    140
D608V5, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              2              245
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PMEPA1 MUTATED        1      0      4      0      2
  PMEPA1 WILD-TYPE    120    104     87    121    115
D608V6, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              0              104
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PMEPA1 MUTATED        2      4      1
  PMEPA1 WILD-TYPE    157    247    164
D608V7, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              4              247
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PMEPA1 MUTATED        1      3      3      0      0
  PMEPA1 WILD-TYPE    117    128    148     94     81
D608V8, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PMEPA1 MUTATED        1      3      0      0      2
  PMEPA1 WILD-TYPE    117    133    115     40     69
D608V9, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PMEPA1 MUTATED        1      3      2      0      0
  PMEPA1 WILD-TYPE     47    106    128    101     92
D608V10, multiclass
        clus
vv       PMEPA1 MUTATED PMEPA1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(609) Variable = PTPLA MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPLA MUTATED        2      1      0      3
  PTPLA WILD-TYPE    133     91    172    173
D609V1, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPLA MUTATED        6      1      0
  PTPLA WILD-TYPE    209    154    162
D609V2, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPLA MUTATED        3      1      1      0
  PTPLA WILD-TYPE    132    123    124     60
D609V3, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPLA MUTATED        3      0      2
  PTPLA WILD-TYPE    250    102     87
D609V4, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPLA MUTATED        1      4      2
  PTPLA WILD-TYPE    163    243    141
D609V5, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPLA MUTATED        0      0      4      1      2
  PTPLA WILD-TYPE    121    104     87    120    115
D609V6, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPLA MUTATED        2      4      1
  PTPLA WILD-TYPE    157    247    164
D609V7, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             2             157
  CLUS_2             4             247
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPLA MUTATED        1      4      0      1      1
  PTPLA WILD-TYPE    117    127    151     93     80
D609V8, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             0             151
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPLA MUTATED        1      3      1      1      0
  PTPLA WILD-TYPE    117    133    114     39     71
D609V9, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPLA MUTATED        0      3      1      1      1
  PTPLA WILD-TYPE     48    106    129    100     91
D609V10, multiclass
        clus
vv       PTPLA MUTATED PTPLA WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(610) Variable = PNLIPRP3 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PNLIPRP3 MUTATED        3      3      4      7
  PNLIPRP3 WILD-TYPE    132     89    168    169
D610V1, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                3                 89
  CLUS_3                4                168
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PNLIPRP3 MUTATED       11      2      3
  PNLIPRP3 WILD-TYPE    204    153    159
D610V2, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1               11                204
  CLUS_2                2                153
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PNLIPRP3 MUTATED        2      6      3      1
  PNLIPRP3 WILD-TYPE    133    118    122     59
D610V3, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                6                118
  CLUS_3                3                122
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PNLIPRP3 MUTATED        6      5      1
  PNLIPRP3 WILD-TYPE    247     97     88
D610V4, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                6                247
  CLUS_2                5                 97
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PNLIPRP3 MUTATED        4     10      2
  PNLIPRP3 WILD-TYPE    160    237    141
D610V5, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               10                237
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNLIPRP3 MUTATED        6      2      5      1      2
  PNLIPRP3 WILD-TYPE    115    102     86    120    115
D610V6, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                6                115
  CLUS_2                2                102
  CLUS_3                5                 86
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PNLIPRP3 MUTATED        4     11      2
  PNLIPRP3 WILD-TYPE    155    240    163
D610V7, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                4                155
  CLUS_2               11                240
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNLIPRP3 MUTATED        1      5      6      2      3
  PNLIPRP3 WILD-TYPE    117    126    145     92     78
D610V8, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                126
  CLUS_3                6                145
  CLUS_4                2                 92
  CLUS_5                3                 78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNLIPRP3 MUTATED        4      4      1      2      3
  PNLIPRP3 WILD-TYPE    114    132    114     38     68
D610V9, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                4                114
  CLUS_2                4                132
  CLUS_3                1                114
  CLUS_4                2                 38
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNLIPRP3 MUTATED        3      2      6      1      2
  PNLIPRP3 WILD-TYPE     45    107    124    100     90
D610V10, multiclass
        clus
vv       PNLIPRP3 MUTATED PNLIPRP3 WILD-TYPE
  CLUS_1                3                 45
  CLUS_2                2                107
  CLUS_3                6                124
  CLUS_4                1                100
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(611) Variable = KIAA1797 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1797 MUTATED        1      4      4     16
  KIAA1797 WILD-TYPE    134     88    168    160
D611V1, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                4                 88
  CLUS_3                4                168
  CLUS_4               16                160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1797 MUTATED       12      4      6
  KIAA1797 WILD-TYPE    203    151    156
D611V2, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1               12                203
  CLUS_2                4                151
  CLUS_3                6                156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1797 MUTATED        7      7      3      3
  KIAA1797 WILD-TYPE    128    117    122     57
D611V3, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                7                117
  CLUS_3                3                122
  CLUS_4                3                 57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1797 MUTATED       15      2      3
  KIAA1797 WILD-TYPE    238    100     86
D611V4, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1               15                238
  CLUS_2                2                100
  CLUS_3                3                 86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1797 MUTATED        5     12      7
  KIAA1797 WILD-TYPE    159    235    136
D611V5, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                5                159
  CLUS_2               12                235
  CLUS_3                7                136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1797 MUTATED        4      5      8      2      5
  KIAA1797 WILD-TYPE    117     99     83    119    112
D611V6, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                4                117
  CLUS_2                5                 99
  CLUS_3                8                 83
  CLUS_4                2                119
  CLUS_5                5                112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1797 MUTATED        3     14      8
  KIAA1797 WILD-TYPE    156    237    157
D611V7, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               14                237
  CLUS_3                8                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1797 MUTATED        3      7     10      3      2
  KIAA1797 WILD-TYPE    115    124    141     91     79
D611V8, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                7                124
  CLUS_3               10                141
  CLUS_4                3                 91
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1797 MUTATED        3      5      3      4      6
  KIAA1797 WILD-TYPE    115    131    112     36     65
D611V9, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                5                131
  CLUS_3                3                112
  CLUS_4                4                 36
  CLUS_5                6                 65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1797 MUTATED        2      5      7      4      3
  KIAA1797 WILD-TYPE     46    104    123     97     89
D611V10, multiclass
        clus
vv       KIAA1797 MUTATED KIAA1797 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                5                104
  CLUS_3                7                123
  CLUS_4                4                 97
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(612) Variable = UBQLN2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBQLN2 MUTATED        0      2      4      5
  UBQLN2 WILD-TYPE    135     90    168    171
D612V1, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBQLN2 MUTATED        3      4      3
  UBQLN2 WILD-TYPE    212    151    159
D612V2, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              4              151
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBQLN2 MUTATED        2      5      1      0
  UBQLN2 WILD-TYPE    133    119    124     60
D612V3, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBQLN2 MUTATED        5      2      1
  UBQLN2 WILD-TYPE    248    100     88
D612V4, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBQLN2 MUTATED        6      4      1
  UBQLN2 WILD-TYPE    158    243    142
D612V5, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              4              243
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBQLN2 MUTATED        1      4      1      4      1
  UBQLN2 WILD-TYPE    120    100     90    117    116
D612V6, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              1               90
  CLUS_4              4              117
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UBQLN2 MUTATED        4      6      1
  UBQLN2 WILD-TYPE    155    245    164
D612V7, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              4              155
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBQLN2 MUTATED        0      4      3      4      0
  UBQLN2 WILD-TYPE    118    127    148     90     81
D612V8, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              4               90
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBQLN2 MUTATED        4      2      1      0      2
  UBQLN2 WILD-TYPE    114    134    114     40     69
D612V9, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBQLN2 MUTATED        0      1      4      0      4
  UBQLN2 WILD-TYPE     48    108    126    101     88
D612V10, multiclass
        clus
vv       UBQLN2 MUTATED UBQLN2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(613) Variable = CYP51A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP51A1 MUTATED        2      1      2      8
  CYP51A1 WILD-TYPE    133     91    170    168
D613V1, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP51A1 MUTATED        6      3      3
  CYP51A1 WILD-TYPE    209    152    159
D613V2, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CYP51A1 MUTATED        2      2      2      4
  CYP51A1 WILD-TYPE    133    122    123     56
D613V3, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               4                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP51A1 MUTATED        8      1      1
  CYP51A1 WILD-TYPE    245    101     88
D613V4, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP51A1 MUTATED        2      5      3
  CYP51A1 WILD-TYPE    162    242    140
D613V5, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               5               242
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP51A1 MUTATED        3      1      3      2      1
  CYP51A1 WILD-TYPE    118    103     88    119    116
D613V6, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               1               103
  CLUS_3               3                88
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CYP51A1 MUTATED        3      7      3
  CYP51A1 WILD-TYPE    156    244    162
D613V7, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               7               244
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP51A1 MUTATED        2      5      3      2      1
  CYP51A1 WILD-TYPE    116    126    148     92     80
D613V8, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               3               148
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP51A1 MUTATED        3      2      2      0      3
  CYP51A1 WILD-TYPE    115    134    113     40     68
D613V9, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CYP51A1 MUTATED        2      3      2      1      2
  CYP51A1 WILD-TYPE     46    106    128    100     90
D613V10, multiclass
        clus
vv       CYP51A1 MUTATED CYP51A1 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               3               106
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(614) Variable = AMZ2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMZ2 MUTATED        0      0      1      3
  AMZ2 WILD-TYPE    135     92    171    173
D614V1, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AMZ2 MUTATED        3      0      1
  AMZ2 WILD-TYPE    212    155    161
D614V2, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMZ2 MUTATED        3      1      0      0
  AMZ2 WILD-TYPE    132    123    125     60
D614V3, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AMZ2 MUTATED        3      1      0
  AMZ2 WILD-TYPE    250    101     89
D614V4, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AMZ2 MUTATED        2      3      0
  AMZ2 WILD-TYPE    162    244    143
D614V5, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMZ2 MUTATED        0      1      3      1      0
  AMZ2 WILD-TYPE    121    103     88    120    117
D614V6, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AMZ2 MUTATED        1      4      0
  AMZ2 WILD-TYPE    158    247    165
D614V7, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMZ2 MUTATED        0      4      0      1      0
  AMZ2 WILD-TYPE    118    127    151     93     81
D614V8, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            0            151
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMZ2 MUTATED        1      2      0      1      0
  AMZ2 WILD-TYPE    117    134    115     39     71
D614V9, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMZ2 MUTATED        1      2      0      0      1
  AMZ2 WILD-TYPE     47    107    130    101     91
D614V10, multiclass
        clus
vv       AMZ2 MUTATED AMZ2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            0            130
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(615) Variable = CD58 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD58 MUTATED        1      1      0      6
  CD58 WILD-TYPE    134     91    172    170
D615V1, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD58 MUTATED        4      1      2
  CD58 WILD-TYPE    211    154    160
D615V2, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD58 MUTATED        4      1      0      1
  CD58 WILD-TYPE    131    123    125     59
D615V3, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD58 MUTATED        5      0      1
  CD58 WILD-TYPE    248    102     88
D615V4, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD58 MUTATED        0      5      3
  CD58 WILD-TYPE    164    242    140
D615V5, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD58 MUTATED        1      2      2      0      3
  CD58 WILD-TYPE    120    102     89    121    114
D615V6, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD58 MUTATED        0      7      1
  CD58 WILD-TYPE    159    244    164
D615V7, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            7            244
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD58 MUTATED        0      3      5      0      0
  CD58 WILD-TYPE    118    128    146     94     81
D615V8, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD58 MUTATED        0      1      0      2      4
  CD58 WILD-TYPE    118    135    115     38     67
D615V9, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD58 MUTATED        0      2      5      0      0
  CD58 WILD-TYPE     48    107    125    101     92
D615V10, multiclass
        clus
vv       CD58 MUTATED CD58 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(616) Variable = SDAD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SDAD1 MUTATED        0      1      1      7
  SDAD1 WILD-TYPE    135     91    171    169
D616V1, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SDAD1 MUTATED        5      1      1
  SDAD1 WILD-TYPE    210    154    161
D616V2, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SDAD1 MUTATED        3      3      3      0
  SDAD1 WILD-TYPE    132    121    122     60
D616V3, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SDAD1 MUTATED        6      2      1
  SDAD1 WILD-TYPE    247    100     88
D616V4, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SDAD1 MUTATED        1      4      3
  SDAD1 WILD-TYPE    163    243    140
D616V5, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDAD1 MUTATED        0      1      4      1      2
  SDAD1 WILD-TYPE    121    103     87    120    115
D616V6, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SDAD1 MUTATED        0      6      3
  SDAD1 WILD-TYPE    159    245    162
D616V7, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDAD1 MUTATED        0      2      4      1      2
  SDAD1 WILD-TYPE    118    129    147     93     79
D616V8, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDAD1 MUTATED        0      0      2      0      3
  SDAD1 WILD-TYPE    118    136    113     40     68
D616V9, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             136
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDAD1 MUTATED        0      0      4      0      1
  SDAD1 WILD-TYPE     48    109    126    101     91
D616V10, multiclass
        clus
vv       SDAD1 MUTATED SDAD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             0             109
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(617) Variable = ANKRD23 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD23 MUTATED        0      1      0      7
  ANKRD23 WILD-TYPE    135     91    172    169
D617V1, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD23 MUTATED        4      1      2
  ANKRD23 WILD-TYPE    211    154    160
D617V2, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD23 MUTATED        1      4      1      1
  ANKRD23 WILD-TYPE    134    120    124     59
D617V3, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD23 MUTATED        5      0      2
  ANKRD23 WILD-TYPE    248    102     87
D617V4, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD23 MUTATED        2      4      1
  ANKRD23 WILD-TYPE    162    243    142
D617V5, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD23 MUTATED        1      0      4      1      1
  ANKRD23 WILD-TYPE    120    104     87    120    116
D617V6, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               4                87
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD23 MUTATED        2      4      2
  ANKRD23 WILD-TYPE    157    247    163
D617V7, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               4               247
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD23 MUTATED        0      4      0      2      2
  ANKRD23 WILD-TYPE    118    127    151     92     79
D617V8, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               127
  CLUS_3               0               151
  CLUS_4               2                92
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD23 MUTATED        2      4      0      0      1
  ANKRD23 WILD-TYPE    116    132    115     40     70
D617V9, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               132
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD23 MUTATED        0      3      1      1      2
  ANKRD23 WILD-TYPE     48    106    129    100     90
D617V10, multiclass
        clus
vv       ANKRD23 MUTATED ANKRD23 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(618) Variable = ACTR8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACTR8 MUTATED        0      1      1      9
  ACTR8 WILD-TYPE    135     91    171    167
D618V1, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTR8 MUTATED        8      1      1
  ACTR8 WILD-TYPE    207    154    161
D618V2, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACTR8 MUTATED        5      3      2      0
  ACTR8 WILD-TYPE    130    121    123     60
D618V3, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTR8 MUTATED        7      1      2
  ACTR8 WILD-TYPE    246    101     87
D618V4, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTR8 MUTATED        1      6      4
  ACTR8 WILD-TYPE    163    241    139
D618V5, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTR8 MUTATED        2      1      7      0      1
  ACTR8 WILD-TYPE    119    103     84    121    116
D618V6, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTR8 MUTATED        1      9      2
  ACTR8 WILD-TYPE    158    242    163
D618V7, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTR8 MUTATED        2      4      5      0      1
  ACTR8 WILD-TYPE    116    127    146     94     80
D618V8, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTR8 MUTATED        1      2      2      1      3
  ACTR8 WILD-TYPE    117    134    113     39     68
D618V9, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTR8 MUTATED        2      2      3      2      0
  ACTR8 WILD-TYPE     46    107    127     99     92
D618V10, multiclass
        clus
vv       ACTR8 MUTATED ACTR8 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(619) Variable = IFT140 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFT140 MUTATED        5      4      3     10
  IFT140 WILD-TYPE    130     88    169    166
D619V1, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFT140 MUTATED       12      5      2
  IFT140 WILD-TYPE    203    150    160
D619V2, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              5              150
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFT140 MUTATED        9      5      1      2
  IFT140 WILD-TYPE    126    119    124     58
D619V3, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              9              126
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFT140 MUTATED       12      4      1
  IFT140 WILD-TYPE    241     98     88
D619V4, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1             12              241
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFT140 MUTATED        4     16      3
  IFT140 WILD-TYPE    160    231    140
D619V5, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             16              231
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT140 MUTATED        5      6      7      3      2
  IFT140 WILD-TYPE    116     98     84    118    115
D619V6, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              5              116
  CLUS_2              6               98
  CLUS_3              7               84
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFT140 MUTATED        5     16      2
  IFT140 WILD-TYPE    154    235    163
D619V7, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             16              235
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT140 MUTATED        4      9      6      3      1
  IFT140 WILD-TYPE    114    122    145     91     80
D619V8, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              9              122
  CLUS_3              6              145
  CLUS_4              3               91
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT140 MUTATED        5      6      1      1      5
  IFT140 WILD-TYPE    113    130    114     39     66
D619V9, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT140 MUTATED        2      6      7      0      3
  IFT140 WILD-TYPE     46    103    123    101     89
D619V10, multiclass
        clus
vv       IFT140 MUTATED IFT140 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              6              103
  CLUS_3              7              123
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(620) Variable = GSDMC MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GSDMC MUTATED        1      1      7     10
  GSDMC WILD-TYPE    134     91    165    166
D620V1, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             7             165
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMC MUTATED       13      2      2
  GSDMC WILD-TYPE    202    153    160
D620V2, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1            13             202
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GSDMC MUTATED        8      6      3      0
  GSDMC WILD-TYPE    127    118    122     60
D620V3, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             8             127
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMC MUTATED       11      4      2
  GSDMC WILD-TYPE    242     98     87
D620V4, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMC MUTATED        3     11      4
  GSDMC WILD-TYPE    161    236    139
D620V5, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             3             161
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMC MUTATED        4      3      6      2      3
  GSDMC WILD-TYPE    117    101     85    119    114
D620V6, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             4             117
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMC MUTATED        3     13      3
  GSDMC WILD-TYPE    156    238    162
D620V7, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             3             156
  CLUS_2            13             238
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMC MUTATED        2      8      4      1      4
  GSDMC WILD-TYPE    116    123    147     93     77
D620V8, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             123
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMC MUTATED        2      6      3      1      4
  GSDMC WILD-TYPE    116    130    112     39     67
D620V9, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMC MUTATED        0      7      5      3      1
  GSDMC WILD-TYPE     48    102    125     98     91
D620V10, multiclass
        clus
vv       GSDMC MUTATED GSDMC WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(621) Variable = ANK3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANK3 MUTATED       11      6     10     36
  ANK3 WILD-TYPE    124     86    162    140
D621V1, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           11            124
  CLUS_2            6             86
  CLUS_3           10            162
  CLUS_4           36            140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANK3 MUTATED       30     11     12
  ANK3 WILD-TYPE    185    144    150
D621V2, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           30            185
  CLUS_2           11            144
  CLUS_3           12            150
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANK3 MUTATED       17     21      2      5
  ANK3 WILD-TYPE    118    103    123     55
D621V3, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           17            118
  CLUS_2           21            103
  CLUS_3            2            123
  CLUS_4            5             55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANK3 MUTATED       26     16      3
  ANK3 WILD-TYPE    227     86     86
D621V4, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           26            227
  CLUS_2           16             86
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANK3 MUTATED       12     41      9
  ANK3 WILD-TYPE    152    206    134
D621V5, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           12            152
  CLUS_2           41            206
  CLUS_3            9            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANK3 MUTATED       10     19     21      5      7
  ANK3 WILD-TYPE    111     85     70    116    110
D621V6, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           10            111
  CLUS_2           19             85
  CLUS_3           21             70
  CLUS_4            5            116
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ANK3 MUTATED       11     42     10
  ANK3 WILD-TYPE    148    209    155
D621V7, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           11            148
  CLUS_2           42            209
  CLUS_3           10            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANK3 MUTATED       11     24     21      4      3
  ANK3 WILD-TYPE    107    107    130     90     78
D621V8, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           11            107
  CLUS_2           24            107
  CLUS_3           21            130
  CLUS_4            4             90
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANK3 MUTATED       11     22      7      2      8
  ANK3 WILD-TYPE    107    114    108     38     63
D621V9, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1           11            107
  CLUS_2           22            114
  CLUS_3            7            108
  CLUS_4            2             38
  CLUS_5            8             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANK3 MUTATED        6     20     17      3      4
  ANK3 WILD-TYPE     42     89    113     98     88
D621V10, multiclass
        clus
vv       ANK3 MUTATED ANK3 WILD-TYPE
  CLUS_1            6             42
  CLUS_2           20             89
  CLUS_3           17            113
  CLUS_4            3             98
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(622) Variable = TMEM87B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM87B MUTATED        0      0      0      6
  TMEM87B WILD-TYPE    135     92    172    170
D622V1, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM87B MUTATED        4      0      1
  TMEM87B WILD-TYPE    211    155    161
D622V2, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               4               211
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM87B MUTATED        3      2      0      1
  TMEM87B WILD-TYPE    132    122    125     59
D622V3, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM87B MUTATED        6      0      0
  TMEM87B WILD-TYPE    247    102     89
D622V4, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               6               247
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM87B MUTATED        0      4      1
  TMEM87B WILD-TYPE    164    243    142
D622V5, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0               164
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM87B MUTATED        0      0      4      0      1
  TMEM87B WILD-TYPE    121    104     87    121    116
D622V6, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM87B MUTATED        0      5      1
  TMEM87B WILD-TYPE    159    246    164
D622V7, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0               159
  CLUS_2               5               246
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM87B MUTATED        0      3      3      0      0
  TMEM87B WILD-TYPE    118    128    148     94     81
D622V8, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM87B MUTATED        0      3      0      0      2
  TMEM87B WILD-TYPE    118    133    115     40     69
D622V9, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM87B MUTATED        0      3      2      0      0
  TMEM87B WILD-TYPE     48    106    128    101     92
D622V10, multiclass
        clus
vv       TMEM87B MUTATED TMEM87B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(623) Variable = CCDC103 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC103 MUTATED        1      0      1      3
  CCDC103 WILD-TYPE    134     92    171    173
D623V1, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC103 MUTATED        2      1      2
  CCDC103 WILD-TYPE    213    154    160
D623V2, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC103 MUTATED        1      3      0      0
  CCDC103 WILD-TYPE    134    121    125     60
D623V3, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC103 MUTATED        2      2      0
  CCDC103 WILD-TYPE    251    100     89
D623V4, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               2               251
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC103 MUTATED        3      1      1
  CCDC103 WILD-TYPE    161    246    142
D623V5, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               1               246
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC103 MUTATED        0      0      2      1      2
  CCDC103 WILD-TYPE    121    104     89    120    115
D623V6, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CCDC103 MUTATED        1      2      2
  CCDC103 WILD-TYPE    158    249    163
D623V7, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               2               249
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC103 MUTATED        0      0      3      1      1
  CCDC103 WILD-TYPE    118    131    148     93     80
D623V8, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               0               131
  CLUS_3               3               148
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC103 MUTATED        1      1      1      1      1
  CCDC103 WILD-TYPE    117    135    114     39     70
D623V9, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC103 MUTATED        0      0      3      1      1
  CCDC103 WILD-TYPE     48    109    127    100     91
D623V10, multiclass
        clus
vv       CCDC103 MUTATED CCDC103 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(624) Variable = AXIN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AXIN1 MUTATED        4      1      4      7
  AXIN1 WILD-TYPE    131     91    168    169
D624V1, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN1 MUTATED       10      3      1
  AXIN1 WILD-TYPE    205    152    161
D624V2, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AXIN1 MUTATED        6      5      2      1
  AXIN1 WILD-TYPE    129    119    123     59
D624V3, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN1 MUTATED       11      2      1
  AXIN1 WILD-TYPE    242    100     88
D624V4, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN1 MUTATED        1     12      2
  AXIN1 WILD-TYPE    163    235    141
D624V5, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            12             235
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN1 MUTATED        0      3      9      1      2
  AXIN1 WILD-TYPE    121    101     82    120    115
D624V6, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AXIN1 MUTATED        1     13      2
  AXIN1 WILD-TYPE    158    238    163
D624V7, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            13             238
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN1 MUTATED        1     10      2      1      2
  AXIN1 WILD-TYPE    117    121    149     93     79
D624V8, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            10             121
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN1 MUTATED        1      6      2      1      2
  AXIN1 WILD-TYPE    117    130    113     39     69
D624V9, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AXIN1 MUTATED        0      8      1      2      1
  AXIN1 WILD-TYPE     48    101    129     99     91
D624V10, multiclass
        clus
vv       AXIN1 MUTATED AXIN1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             1             129
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(625) Variable = CTSD MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSD MUTATED        3      1      2      5
  CTSD WILD-TYPE    132     91    170    171
D625V1, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSD MUTATED        8      1      2
  CTSD WILD-TYPE    207    154    160
D625V2, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            8            207
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSD MUTATED        4      3      2      0
  CTSD WILD-TYPE    131    121    123     60
D625V3, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSD MUTATED        7      1      1
  CTSD WILD-TYPE    246    101     88
D625V4, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            7            246
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSD MUTATED        2      8      1
  CTSD WILD-TYPE    162    239    142
D625V5, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSD MUTATED        1      3      5      1      1
  CTSD WILD-TYPE    120    101     86    120    116
D625V6, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSD MUTATED        3      6      2
  CTSD WILD-TYPE    156    245    163
D625V7, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSD MUTATED        2      6      3      0      0
  CTSD WILD-TYPE    116    125    148     94     81
D625V8, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSD MUTATED        1      3      1      3      3
  CTSD WILD-TYPE    117    133    114     37     68
D625V9, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            3             37
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSD MUTATED        1      6      3      1      0
  CTSD WILD-TYPE     47    103    127    100     92
D625V10, multiclass
        clus
vv       CTSD MUTATED CTSD WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(626) Variable = BAT4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAT4 MUTATED        2      0      0      4
  BAT4 WILD-TYPE    133     92    172    172
D626V1, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT4 MUTATED        4      1      1
  BAT4 WILD-TYPE    211    154    161
D626V2, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAT4 MUTATED        2      1      1      0
  BAT4 WILD-TYPE    133    123    124     60
D626V3, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1            123
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT4 MUTATED        2      0      2
  BAT4 WILD-TYPE    251    102     87
D626V4, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            2            251
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT4 MUTATED        1      2      2
  BAT4 WILD-TYPE    163    245    141
D626V5, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT4 MUTATED        1      0      2      0      2
  BAT4 WILD-TYPE    120    104     89    121    115
D626V6, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT4 MUTATED        1      3      2
  BAT4 WILD-TYPE    158    248    163
D626V7, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT4 MUTATED        1      2      1      0      2
  BAT4 WILD-TYPE    117    129    150     94     79
D626V8, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT4 MUTATED        0      2      2      1      1
  BAT4 WILD-TYPE    118    134    113     39     70
D626V9, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT4 MUTATED        1      1      2      2      0
  BAT4 WILD-TYPE     47    108    128     99     92
D626V10, multiclass
        clus
vv       BAT4 MUTATED BAT4 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(627) Variable = OSTALPHA MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSTALPHA MUTATED        0      0      1      4
  OSTALPHA WILD-TYPE    135     92    171    172
D627V1, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  OSTALPHA MUTATED        4      1      0
  OSTALPHA WILD-TYPE    211    154    162
D627V2, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSTALPHA MUTATED        2      2      0      0
  OSTALPHA WILD-TYPE    133    122    125     60
D627V3, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                122
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  OSTALPHA MUTATED        2      2      0
  OSTALPHA WILD-TYPE    251    100     89
D627V4, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                2                251
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  OSTALPHA MUTATED        2      2      1
  OSTALPHA WILD-TYPE    162    245    142
D627V5, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                2                162
  CLUS_2                2                245
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSTALPHA MUTATED        1      0      4      0      0
  OSTALPHA WILD-TYPE    120    104     87    121    117
D627V6, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                4                 87
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  OSTALPHA MUTATED        1      4      0
  OSTALPHA WILD-TYPE    158    247    165
D627V7, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSTALPHA MUTATED        0      3      1      1      0
  OSTALPHA WILD-TYPE    118    128    150     93     81
D627V8, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                128
  CLUS_3                1                150
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSTALPHA MUTATED        1      1      0      1      1
  OSTALPHA WILD-TYPE    117    135    115     39     70
D627V9, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                1                117
  CLUS_2                1                135
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSTALPHA MUTATED        1      1      1      0      1
  OSTALPHA WILD-TYPE     47    108    129    101     91
D627V10, multiclass
        clus
vv       OSTALPHA MUTATED OSTALPHA WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                1                108
  CLUS_3                1                129
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(628) Variable = FNDC4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FNDC4 MUTATED        0      0      1      4
  FNDC4 WILD-TYPE    135     92    171    172
D628V1, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FNDC4 MUTATED        5      0      1
  FNDC4 WILD-TYPE    210    155    161
D628V2, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FNDC4 MUTATED        1      4      0      0
  FNDC4 WILD-TYPE    134    120    125     60
D628V3, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FNDC4 MUTATED        3      2      0
  FNDC4 WILD-TYPE    250    100     89
D628V4, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FNDC4 MUTATED        0      4      1
  FNDC4 WILD-TYPE    164    243    142
D628V5, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FNDC4 MUTATED        0      1      4      0      0
  FNDC4 WILD-TYPE    121    103     87    121    117
D628V6, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FNDC4 MUTATED        0      6      0
  FNDC4 WILD-TYPE    159    245    165
D628V7, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FNDC4 MUTATED        0      2      4      0      0
  FNDC4 WILD-TYPE    118    129    147     94     81
D628V8, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FNDC4 MUTATED        0      4      0      0      2
  FNDC4 WILD-TYPE    118    132    115     40     69
D628V9, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FNDC4 MUTATED        0      3      3      0      0
  FNDC4 WILD-TYPE     48    106    127    101     92
D628V10, multiclass
        clus
vv       FNDC4 MUTATED FNDC4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(629) Variable = FBXO48 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO48 MUTATED        1      0      0      3
  FBXO48 WILD-TYPE    134     92    172    173
D629V1, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO48 MUTATED        3      1      0
  FBXO48 WILD-TYPE    212    154    162
D629V2, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO48 MUTATED        2      1      0      1
  FBXO48 WILD-TYPE    133    123    125     59
D629V3, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO48 MUTATED        3      1      0
  FBXO48 WILD-TYPE    250    101     89
D629V4, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO48 MUTATED        1      4      0
  FBXO48 WILD-TYPE    163    243    143
D629V5, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              4              243
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO48 MUTATED        1      1      3      0      0
  FBXO48 WILD-TYPE    120    103     88    121    117
D629V6, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO48 MUTATED        0      5      0
  FBXO48 WILD-TYPE    159    246    165
D629V7, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO48 MUTATED        0      4      1      0      0
  FBXO48 WILD-TYPE    118    127    150     94     81
D629V8, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO48 MUTATED        0      2      0      0      2
  FBXO48 WILD-TYPE    118    134    115     40     69
D629V9, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO48 MUTATED        0      2      2      0      0
  FBXO48 WILD-TYPE     48    107    128    101     92
D629V10, multiclass
        clus
vv       FBXO48 MUTATED FBXO48 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(630) Variable = UGT1A4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGT1A4 MUTATED        4      0      1      7
  UGT1A4 WILD-TYPE    131     92    171    169
D630V1, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT1A4 MUTATED        8      1      2
  UGT1A4 WILD-TYPE    207    154    160
D630V2, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGT1A4 MUTATED        3      5      1      1
  UGT1A4 WILD-TYPE    132    119    124     59
D630V3, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT1A4 MUTATED        6      2      2
  UGT1A4 WILD-TYPE    247    100     87
D630V4, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT1A4 MUTATED        1      8      2
  UGT1A4 WILD-TYPE    163    239    141
D630V5, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              8              239
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT1A4 MUTATED        2      3      3      1      2
  UGT1A4 WILD-TYPE    119    101     88    120    115
D630V6, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT1A4 MUTATED        3      8      1
  UGT1A4 WILD-TYPE    156    243    164
D630V7, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              8              243
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT1A4 MUTATED        3      7      2      0      0
  UGT1A4 WILD-TYPE    115    124    149     94     81
D630V8, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              124
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT1A4 MUTATED        1      6      0      2      1
  UGT1A4 WILD-TYPE    117    130    115     38     70
D630V9, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT1A4 MUTATED        2      4      3      1      0
  UGT1A4 WILD-TYPE     46    105    127    100     92
D630V10, multiclass
        clus
vv       UGT1A4 MUTATED UGT1A4 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(631) Variable = FAM113A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM113A MUTATED        0      1      1      8
  FAM113A WILD-TYPE    135     91    171    168
D631V1, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113A MUTATED        2      1      3
  FAM113A WILD-TYPE    213    154    159
D631V2, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM113A MUTATED        2      3      2      2
  FAM113A WILD-TYPE    133    121    123     58
D631V3, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113A MUTATED        6      1      2
  FAM113A WILD-TYPE    247    101     87
D631V4, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               6               247
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113A MUTATED        1      3      5
  FAM113A WILD-TYPE    163    244    138
D631V5, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               1               163
  CLUS_2               3               244
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113A MUTATED        2      2      0      1      4
  FAM113A WILD-TYPE    119    102     91    120    113
D631V6, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               0                91
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM113A MUTATED        2      6      2
  FAM113A WILD-TYPE    157    245    163
D631V7, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               2               157
  CLUS_2               6               245
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113A MUTATED        1      1      6      1      1
  FAM113A WILD-TYPE    117    130    145     93     80
D631V8, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               6               145
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113A MUTATED        0      1      1      1      3
  FAM113A WILD-TYPE    118    135    114     39     68
D631V9, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM113A MUTATED        0      1      3      1      1
  FAM113A WILD-TYPE     48    108    127    100     91
D631V10, multiclass
        clus
vv       FAM113A MUTATED FAM113A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(632) Variable = BAT3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAT3 MUTATED        2      2      2      9
  BAT3 WILD-TYPE    133     90    170    167
D632V1, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT3 MUTATED       10      1      3
  BAT3 WILD-TYPE    205    154    159
D632V2, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAT3 MUTATED        5      1      3      2
  BAT3 WILD-TYPE    130    123    122     58
D632V3, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            1            123
  CLUS_3            3            122
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT3 MUTATED        8      0      3
  BAT3 WILD-TYPE    245    102     86
D632V4, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            0            102
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT3 MUTATED        2      9      4
  BAT3 WILD-TYPE    162    238    139
D632V5, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            9            238
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT3 MUTATED        1      5      4      2      3
  BAT3 WILD-TYPE    120     99     87    119    114
D632V6, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            5             99
  CLUS_3            4             87
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAT3 MUTATED        2      8      5
  BAT3 WILD-TYPE    157    243    160
D632V7, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            8            243
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT3 MUTATED        5      4      4      1      1
  BAT3 WILD-TYPE    113    127    147     93     80
D632V8, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            4            127
  CLUS_3            4            147
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT3 MUTATED        2      4      2      2      3
  BAT3 WILD-TYPE    116    132    113     38     68
D632V9, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAT3 MUTATED        1      3      5      3      1
  BAT3 WILD-TYPE     47    106    125     98     91
D632V10, multiclass
        clus
vv       BAT3 MUTATED BAT3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            5            125
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(633) Variable = TRIML2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIML2 MUTATED        5      4      3     12
  TRIML2 WILD-TYPE    130     88    169    164
D633V1, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIML2 MUTATED       15      4      2
  TRIML2 WILD-TYPE    200    151    160
D633V2, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              4              151
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIML2 MUTATED       12      4      3      1
  TRIML2 WILD-TYPE    123    120    122     59
D633V3, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1             12              123
  CLUS_2              4              120
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIML2 MUTATED       15      2      3
  TRIML2 WILD-TYPE    238    100     86
D633V4, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1             15              238
  CLUS_2              2              100
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIML2 MUTATED        4     16      3
  TRIML2 WILD-TYPE    160    231    140
D633V5, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             16              231
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIML2 MUTATED        6      5      8      1      3
  TRIML2 WILD-TYPE    115     99     83    120    114
D633V6, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              5               99
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIML2 MUTATED        4     16      4
  TRIML2 WILD-TYPE    155    235    161
D633V7, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             16              235
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIML2 MUTATED        3     13      5      1      2
  TRIML2 WILD-TYPE    115    118    146     93     79
D633V8, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             13              118
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIML2 MUTATED        5      7      4      3      1
  TRIML2 WILD-TYPE    113    129    111     37     70
D633V9, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              7              129
  CLUS_3              4              111
  CLUS_4              3               37
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIML2 MUTATED        2      7      6      4      1
  TRIML2 WILD-TYPE     46    102    124     97     91
D633V10, multiclass
        clus
vv       TRIML2 MUTATED TRIML2 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              7              102
  CLUS_3              6              124
  CLUS_4              4               97
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(634) Variable = CTSA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSA MUTATED        0      0      0      4
  CTSA WILD-TYPE    135     92    172    172
D634V1, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSA MUTATED        2      0      1
  CTSA WILD-TYPE    213    155    161
D634V2, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            2            213
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CTSA MUTATED        1      2      1      0
  CTSA WILD-TYPE    134    122    124     60
D634V3, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSA MUTATED        2      1      1
  CTSA WILD-TYPE    251    101     88
D634V4, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            2            251
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSA MUTATED        1      2      1
  CTSA WILD-TYPE    163    245    142
D634V5, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSA MUTATED        0      1      1      0      2
  CTSA WILD-TYPE    121    103     90    121    115
D634V6, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            1             90
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CTSA MUTATED        0      3      2
  CTSA WILD-TYPE    159    248    163
D634V7, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            0            159
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSA MUTATED        0      2      2      0      1
  CTSA WILD-TYPE    118    129    149     94     80
D634V8, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSA MUTATED        0      1      1      0      1
  CTSA WILD-TYPE    118    135    114     40     70
D634V9, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CTSA MUTATED        0      1      2      0      0
  CTSA WILD-TYPE     48    108    128    101     92
D634V10, multiclass
        clus
vv       CTSA MUTATED CTSA WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(635) Variable = ATP6V1C2 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP6V1C2 MUTATED        2      0      2     12
  ATP6V1C2 WILD-TYPE    133     92    170    164
D635V1, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                2                170
  CLUS_4               12                164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1C2 MUTATED        9      2      3
  ATP6V1C2 WILD-TYPE    206    153    159
D635V2, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                2                153
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP6V1C2 MUTATED        6      5      1      1
  ATP6V1C2 WILD-TYPE    129    119    124     59
D635V3, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                6                129
  CLUS_2                5                119
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1C2 MUTATED       11      1      1
  ATP6V1C2 WILD-TYPE    242    101     88
D635V4, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1               11                242
  CLUS_2                1                101
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1C2 MUTATED        3      8      3
  ATP6V1C2 WILD-TYPE    161    239    140
D635V5, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                8                239
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1C2 MUTATED        2      2      6      0      4
  ATP6V1C2 WILD-TYPE    119    102     85    121    113
D635V6, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                2                102
  CLUS_3                6                 85
  CLUS_4                0                121
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ATP6V1C2 MUTATED        1     12      2
  ATP6V1C2 WILD-TYPE    158    239    163
D635V7, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                1                158
  CLUS_2               12                239
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1C2 MUTATED        0      6      8      0      1
  ATP6V1C2 WILD-TYPE    118    125    143     94     80
D635V8, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                125
  CLUS_3                8                143
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1C2 MUTATED        1      5      1      2      4
  ATP6V1C2 WILD-TYPE    117    131    114     38     67
D635V9, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                131
  CLUS_3                1                114
  CLUS_4                2                 38
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1C2 MUTATED        0      7      4      2      0
  ATP6V1C2 WILD-TYPE     48    102    126     99     92
D635V10, multiclass
        clus
vv       ATP6V1C2 MUTATED ATP6V1C2 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                7                102
  CLUS_3                4                126
  CLUS_4                2                 99
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(636) Variable = AKAP11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AKAP11 MUTATED        2      1      4     12
  AKAP11 WILD-TYPE    133     91    168    164
D636V1, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP11 MUTATED        9      5      1
  AKAP11 WILD-TYPE    206    150    161
D636V2, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              5              150
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AKAP11 MUTATED        8      6      1      2
  AKAP11 WILD-TYPE    127    118    124     58
D636V3, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP11 MUTATED       13      3      1
  AKAP11 WILD-TYPE    240     99     88
D636V4, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP11 MUTATED        4     10      4
  AKAP11 WILD-TYPE    160    237    139
D636V5, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             10              237
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP11 MUTATED        1      3      9      3      2
  AKAP11 WILD-TYPE    120    101     82    118    115
D636V6, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              9               82
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP11 MUTATED        5     12      2
  AKAP11 WILD-TYPE    154    239    163
D636V7, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             12              239
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP11 MUTATED        3      7      6      2      1
  AKAP11 WILD-TYPE    115    124    145     92     80
D636V8, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              124
  CLUS_3              6              145
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP11 MUTATED        3      7      0      0      3
  AKAP11 WILD-TYPE    115    129    115     40     68
D636V9, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              129
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP11 MUTATED        1      7      3      0      2
  AKAP11 WILD-TYPE     47    102    127    101     90
D636V10, multiclass
        clus
vv       AKAP11 MUTATED AKAP11 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              7              102
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(637) Variable = RBMX MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBMX MUTATED        2      0      0      8
  RBMX WILD-TYPE    133     92    172    168
D637V1, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBMX MUTATED        5      0      3
  RBMX WILD-TYPE    210    155    159
D637V2, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBMX MUTATED        4      3      1      0
  RBMX WILD-TYPE    131    121    124     60
D637V3, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            4            131
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBMX MUTATED        5      2      1
  RBMX WILD-TYPE    248    100     88
D637V4, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBMX MUTATED        1      5      3
  RBMX WILD-TYPE    163    242    140
D637V5, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBMX MUTATED        0      2      3      0      4
  RBMX WILD-TYPE    121    102     88    121    113
D637V6, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RBMX MUTATED        0      5      5
  RBMX WILD-TYPE    159    246    160
D637V7, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            0            159
  CLUS_2            5            246
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBMX MUTATED        1      4      3      0      2
  RBMX WILD-TYPE    117    127    148     94     79
D637V8, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBMX MUTATED        0      1      3      1      1
  RBMX WILD-TYPE    118    135    112     39     70
D637V9, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBMX MUTATED        0      2      1      3      0
  RBMX WILD-TYPE     48    107    129     98     92
D637V10, multiclass
        clus
vv       RBMX MUTATED RBMX WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            1            129
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(638) Variable = GNPNAT1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GNPNAT1 MUTATED        0      1      2      3
  GNPNAT1 WILD-TYPE    135     91    170    173
D638V1, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GNPNAT1 MUTATED        2      1      2
  GNPNAT1 WILD-TYPE    213    154    160
D638V2, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GNPNAT1 MUTATED        2      1      0      2
  GNPNAT1 WILD-TYPE    133    123    125     58
D638V3, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1               123
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GNPNAT1 MUTATED        4      0      1
  GNPNAT1 WILD-TYPE    249    102     88
D638V4, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               0               102
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GNPNAT1 MUTATED        1      2      2
  GNPNAT1 WILD-TYPE    163    245    141
D638V5, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNPNAT1 MUTATED        0      1      2      1      1
  GNPNAT1 WILD-TYPE    121    103     89    120    116
D638V6, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GNPNAT1 MUTATED        0      4      2
  GNPNAT1 WILD-TYPE    159    247    163
D638V7, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               4               247
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNPNAT1 MUTATED        1      1      3      0      1
  GNPNAT1 WILD-TYPE    117    130    148     94     80
D638V8, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNPNAT1 MUTATED        0      2      1      0      2
  GNPNAT1 WILD-TYPE    118    134    114     40     69
D638V9, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GNPNAT1 MUTATED        0      0      4      1      0
  GNPNAT1 WILD-TYPE     48    109    126    100     92
D638V10, multiclass
        clus
vv       GNPNAT1 MUTATED GNPNAT1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               4               126
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(639) Variable = PTPN23 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN23 MUTATED        1      1      4     19
  PTPN23 WILD-TYPE    134     91    168    157
D639V1, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN23 MUTATED       15      3      4
  PTPN23 WILD-TYPE    200    152    158
D639V2, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              3              152
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN23 MUTATED        8      6      2      3
  PTPN23 WILD-TYPE    127    118    123     57
D639V3, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              6              118
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN23 MUTATED       11      5      3
  PTPN23 WILD-TYPE    242     97     86
D639V4, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              5               97
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN23 MUTATED        3     14      8
  PTPN23 WILD-TYPE    161    233    135
D639V5, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             14              233
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN23 MUTATED        1      7     11      2      4
  PTPN23 WILD-TYPE    120     97     80    119    113
D639V6, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              7               97
  CLUS_3             11               80
  CLUS_4              2              119
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN23 MUTATED        4     16      6
  PTPN23 WILD-TYPE    155    235    159
D639V7, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             16              235
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN23 MUTATED        3      6     15      2      0
  PTPN23 WILD-TYPE    115    125    136     92     81
D639V8, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              125
  CLUS_3             15              136
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN23 MUTATED        2      7      4      0      7
  PTPN23 WILD-TYPE    116    129    111     40     64
D639V9, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              129
  CLUS_3              4              111
  CLUS_4              0               40
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN23 MUTATED        0      5     11      2      2
  PTPN23 WILD-TYPE     48    104    119     99     90
D639V10, multiclass
        clus
vv       PTPN23 MUTATED PTPN23 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3             11              119
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(640) Variable = AGAP6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGAP6 MUTATED        0      1      1      9
  AGAP6 WILD-TYPE    135     91    171    167
D640V1, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP6 MUTATED        8      1      1
  AGAP6 WILD-TYPE    207    154    161
D640V2, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGAP6 MUTATED        2      5      0      1
  AGAP6 WILD-TYPE    133    119    125     59
D640V3, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP6 MUTATED        5      3      0
  AGAP6 WILD-TYPE    248     99     89
D640V4, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP6 MUTATED        1      9      0
  AGAP6 WILD-TYPE    163    238    143
D640V5, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             9             238
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP6 MUTATED        2      4      4      0      0
  AGAP6 WILD-TYPE    119    100     87    121    117
D640V6, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP6 MUTATED        0     10      1
  AGAP6 WILD-TYPE    159    241    164
D640V7, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP6 MUTATED        1      5      5      0      0
  AGAP6 WILD-TYPE    117    126    146     94     81
D640V8, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP6 MUTATED        0      6      1      0      3
  AGAP6 WILD-TYPE    118    130    114     40     68
D640V9, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP6 MUTATED        0      5      4      1      0
  AGAP6 WILD-TYPE     48    104    126    100     92
D640V10, multiclass
        clus
vv       AGAP6 MUTATED AGAP6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(641) Variable = PPARGC1B MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPARGC1B MUTATED        1      2      0      8
  PPARGC1B WILD-TYPE    134     90    172    168
D641V1, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                 90
  CLUS_3                0                172
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPARGC1B MUTATED        8      1      0
  PPARGC1B WILD-TYPE    207    154    162
D641V2, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                8                207
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPARGC1B MUTATED        2      6      0      1
  PPARGC1B WILD-TYPE    133    118    125     59
D641V3, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                2                133
  CLUS_2                6                118
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPARGC1B MUTATED        5      4      0
  PPARGC1B WILD-TYPE    248     98     89
D641V4, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                5                248
  CLUS_2                4                 98
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPARGC1B MUTATED        3      6      2
  PPARGC1B WILD-TYPE    161    241    141
D641V5, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                3                161
  CLUS_2                6                241
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARGC1B MUTATED        2      0      7      0      2
  PPARGC1B WILD-TYPE    119    104     84    121    115
D641V6, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                2                119
  CLUS_2                0                104
  CLUS_3                7                 84
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPARGC1B MUTATED        3      6      2
  PPARGC1B WILD-TYPE    156    245    163
D641V7, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                3                156
  CLUS_2                6                245
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARGC1B MUTATED        2      5      4      0      0
  PPARGC1B WILD-TYPE    116    126    147     94     81
D641V8, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                126
  CLUS_3                4                147
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARGC1B MUTATED        1      5      1      0      1
  PPARGC1B WILD-TYPE    117    131    114     40     70
D641V9, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                131
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPARGC1B MUTATED        1      4      3      0      0
  PPARGC1B WILD-TYPE     47    105    127    101     92
D641V10, multiclass
        clus
vv       PPARGC1B MUTATED PPARGC1B WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                4                105
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(642) Variable = ACTG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACTG2 MUTATED        3      1      1      7
  ACTG2 WILD-TYPE    132     91    171    169
D642V1, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTG2 MUTATED        6      1      1
  ACTG2 WILD-TYPE    209    154    161
D642V2, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ACTG2 MUTATED        3      5      1      0
  ACTG2 WILD-TYPE    132    119    124     60
D642V3, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTG2 MUTATED        5      3      1
  ACTG2 WILD-TYPE    248     99     88
D642V4, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTG2 MUTATED        1      7      3
  ACTG2 WILD-TYPE    163    240    140
D642V5, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTG2 MUTATED        2      4      4      0      1
  ACTG2 WILD-TYPE    119    100     87    121    116
D642V6, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ACTG2 MUTATED        1     10      1
  ACTG2 WILD-TYPE    158    241    164
D642V7, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTG2 MUTATED        5      1      6      0      0
  ACTG2 WILD-TYPE    113    130    145     94     81
D642V8, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             1             130
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTG2 MUTATED        0      3      2      0      3
  ACTG2 WILD-TYPE    118    133    113     40     68
D642V9, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ACTG2 MUTATED        1      2      3      2      0
  ACTG2 WILD-TYPE     47    107    127     99     92
D642V10, multiclass
        clus
vv       ACTG2 MUTATED ACTG2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(643) Variable = SMTN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMTN MUTATED        4      1      0     16
  SMTN WILD-TYPE    131     91    172    160
D643V1, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMTN MUTATED       12      2      4
  SMTN WILD-TYPE    203    153    158
D643V2, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1           12            203
  CLUS_2            2            153
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMTN MUTATED        6      7      5      1
  SMTN WILD-TYPE    129    117    120     59
D643V3, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            6            129
  CLUS_2            7            117
  CLUS_3            5            120
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMTN MUTATED       10      5      4
  SMTN WILD-TYPE    243     97     85
D643V4, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1           10            243
  CLUS_2            5             97
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMTN MUTATED        2     11      7
  SMTN WILD-TYPE    162    236    136
D643V5, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            2            162
  CLUS_2           11            236
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMTN MUTATED        2      1     11      1      5
  SMTN WILD-TYPE    119    103     80    120    112
D643V6, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3           11             80
  CLUS_4            1            120
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMTN MUTATED        1     14      6
  SMTN WILD-TYPE    158    237    159
D643V7, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            1            158
  CLUS_2           14            237
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMTN MUTATED        1     10      5      1      4
  SMTN WILD-TYPE    117    121    146     93     77
D643V8, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            1            117
  CLUS_2           10            121
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMTN MUTATED        0      7      2      4      3
  SMTN WILD-TYPE    118    129    113     36     68
D643V9, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            7            129
  CLUS_3            2            113
  CLUS_4            4             36
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMTN MUTATED        2      8      4      1      1
  SMTN WILD-TYPE     46    101    126    100     91
D643V10, multiclass
        clus
vv       SMTN MUTATED SMTN WILD-TYPE
  CLUS_1            2             46
  CLUS_2            8            101
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(644) Variable = C9ORF46 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF46 MUTATED        0      2      0      3
  C9ORF46 WILD-TYPE    135     90    172    173
D644V1, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF46 MUTATED        3      0      1
  C9ORF46 WILD-TYPE    212    155    161
D644V2, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF46 MUTATED        2      2      0      1
  C9ORF46 WILD-TYPE    133    122    125     59
D644V3, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF46 MUTATED        3      2      0
  C9ORF46 WILD-TYPE    250    100     89
D644V4, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF46 MUTATED        1      3      1
  C9ORF46 WILD-TYPE    163    244    142
D644V5, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               3               244
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF46 MUTATED        1      2      2      0      0
  C9ORF46 WILD-TYPE    120    102     89    121    117
D644V6, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF46 MUTATED        0      4      1
  C9ORF46 WILD-TYPE    159    247    164
D644V7, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               4               247
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF46 MUTATED        0      2      3      0      0
  C9ORF46 WILD-TYPE    118    129    148     94     81
D644V8, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               129
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF46 MUTATED        0      2      1      0      1
  C9ORF46 WILD-TYPE    118    134    114     40     70
D644V9, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF46 MUTATED        0      1      3      0      0
  C9ORF46 WILD-TYPE     48    108    127    101     92
D644V10, multiclass
        clus
vv       C9ORF46 MUTATED C9ORF46 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(645) Variable = KCNMB2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNMB2 MUTATED        5      1      0      4
  KCNMB2 WILD-TYPE    130     91    172    172
D645V1, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNMB2 MUTATED        5      1      3
  KCNMB2 WILD-TYPE    210    154    159
D645V2, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNMB2 MUTATED        2      1      4      1
  KCNMB2 WILD-TYPE    133    123    121     59
D645V3, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1              123
  CLUS_3              4              121
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNMB2 MUTATED        4      1      3
  KCNMB2 WILD-TYPE    249    101     86
D645V4, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNMB2 MUTATED        1      6      3
  KCNMB2 WILD-TYPE    163    241    140
D645V5, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNMB2 MUTATED        4      3      2      0      1
  KCNMB2 WILD-TYPE    117    101     89    121    116
D645V6, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              3              101
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KCNMB2 MUTATED        0      6      4
  KCNMB2 WILD-TYPE    159    245    161
D645V7, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              6              245
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNMB2 MUTATED        3      2      4      0      1
  KCNMB2 WILD-TYPE    115    129    147     94     80
D645V8, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNMB2 MUTATED        0      4      2      1      1
  KCNMB2 WILD-TYPE    118    132    113     39     70
D645V9, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNMB2 MUTATED        0      2      1      5      0
  KCNMB2 WILD-TYPE     48    107    129     96     92
D645V10, multiclass
        clus
vv       KCNMB2 MUTATED KCNMB2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              5               96
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(646) Variable = C9ORF152 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF152 MUTATED        2      0      0      2
  C9ORF152 WILD-TYPE    133     92    172    174
D646V1, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                2                174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF152 MUTATED        3      0      0
  C9ORF152 WILD-TYPE    212    155    162
D646V2, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                3                212
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF152 MUTATED        2      1      0      1
  C9ORF152 WILD-TYPE    133    123    125     59
D646V3, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                123
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF152 MUTATED        2      2      0
  C9ORF152 WILD-TYPE    251    100     89
D646V4, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                2                251
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF152 MUTATED        1      2      1
  C9ORF152 WILD-TYPE    163    245    142
D646V5, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                2                245
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF152 MUTATED        1      0      1      0      2
  C9ORF152 WILD-TYPE    120    104     90    121    115
D646V6, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                1                 90
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C9ORF152 MUTATED        0      4      0
  C9ORF152 WILD-TYPE    159    247    165
D646V7, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                4                247
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF152 MUTATED        0      2      2      0      0
  C9ORF152 WILD-TYPE    118    129    149     94     81
D646V8, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                129
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF152 MUTATED        0      2      0      0      1
  C9ORF152 WILD-TYPE    118    134    115     40     70
D646V9, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF152 MUTATED        0      1      2      0      0
  C9ORF152 WILD-TYPE     48    108    128    101     92
D646V10, multiclass
        clus
vv       C9ORF152 MUTATED C9ORF152 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(647) Variable = ZFP36L1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFP36L1 MUTATED        0      0      0      5
  ZFP36L1 WILD-TYPE    135     92    172    171
D647V1, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L1 MUTATED        2      0      3
  ZFP36L1 WILD-TYPE    213    155    159
D647V2, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               0               155
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZFP36L1 MUTATED        2      2      0      0
  ZFP36L1 WILD-TYPE    133    122    125     60
D647V3, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L1 MUTATED        2      2      0
  ZFP36L1 WILD-TYPE    251    100     89
D647V4, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               2               251
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L1 MUTATED        0      2      3
  ZFP36L1 WILD-TYPE    164    245    140
D647V5, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               2               245
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L1 MUTATED        1      0      3      0      1
  ZFP36L1 WILD-TYPE    120    104     88    121    116
D647V6, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZFP36L1 MUTATED        0      4      1
  ZFP36L1 WILD-TYPE    159    247    164
D647V7, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               4               247
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L1 MUTATED        0      1      3      0      1
  ZFP36L1 WILD-TYPE    118    130    148     94     80
D647V8, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               130
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L1 MUTATED        0      2      1      0      2
  ZFP36L1 WILD-TYPE    118    134    114     40     69
D647V9, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZFP36L1 MUTATED        0      2      2      1      0
  ZFP36L1 WILD-TYPE     48    107    128    100     92
D647V10, multiclass
        clus
vv       ZFP36L1 MUTATED ZFP36L1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(648) Variable = HTR1F MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTR1F MUTATED        3      3      1      2
  HTR1F WILD-TYPE    132     89    171    174
D648V1, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             1             171
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1F MUTATED        6      1      1
  HTR1F WILD-TYPE    209    154    161
D648V2, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTR1F MUTATED        4      1      2      0
  HTR1F WILD-TYPE    131    123    123     60
D648V3, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1F MUTATED        6      1      0
  HTR1F WILD-TYPE    247    101     89
D648V4, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1F MUTATED        1      7      1
  HTR1F WILD-TYPE    163    240    142
D648V5, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1F MUTATED        2      2      3      1      1
  HTR1F WILD-TYPE    119    102     88    120    116
D648V6, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1F MUTATED        1      5      3
  HTR1F WILD-TYPE    158    246    162
D648V7, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1F MUTATED        3      3      2      1      0
  HTR1F WILD-TYPE    115    128    149     93     81
D648V8, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1F MUTATED        1      3      2      0      1
  HTR1F WILD-TYPE    117    133    113     40     70
D648V9, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1F MUTATED        0      2      3      1      1
  HTR1F WILD-TYPE     48    107    127    100     91
D648V10, multiclass
        clus
vv       HTR1F MUTATED HTR1F WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(649) Variable = CDH24 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDH24 MUTATED        1      1      2     10
  CDH24 WILD-TYPE    134     91    170    166
D649V1, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH24 MUTATED        9      1      1
  CDH24 WILD-TYPE    206    154    161
D649V2, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDH24 MUTATED        1      5      1      2
  CDH24 WILD-TYPE    134    119    124     58
D649V3, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH24 MUTATED        6      2      1
  CDH24 WILD-TYPE    247    100     88
D649V4, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH24 MUTATED        0     11      2
  CDH24 WILD-TYPE    164    236    141
D649V5, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            11             236
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH24 MUTATED        0      4      8      0      1
  CDH24 WILD-TYPE    121    100     83    121    116
D649V6, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CDH24 MUTATED        0     12      2
  CDH24 WILD-TYPE    159    239    163
D649V7, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH24 MUTATED        2      8      4      0      0
  CDH24 WILD-TYPE    116    123    147     94     81
D649V8, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             123
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH24 MUTATED        0      5      1      2      2
  CDH24 WILD-TYPE    118    131    114     38     69
D649V9, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDH24 MUTATED        0      5      3      2      0
  CDH24 WILD-TYPE     48    104    127     99     92
D649V10, multiclass
        clus
vv       CDH24 MUTATED CDH24 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(650) Variable = HERC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HERC1 MUTATED        6      8     11     24
  HERC1 WILD-TYPE    129     84    161    152
D650V1, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             8              84
  CLUS_3            11             161
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HERC1 MUTATED       25     11      7
  HERC1 WILD-TYPE    190    144    155
D650V2, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1            25             190
  CLUS_2            11             144
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HERC1 MUTATED       12     12      5      4
  HERC1 WILD-TYPE    123    112    120     56
D650V3, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1            12             123
  CLUS_2            12             112
  CLUS_3             5             120
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HERC1 MUTATED       22      8      3
  HERC1 WILD-TYPE    231     94     86
D650V4, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1            22             231
  CLUS_2             8              94
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HERC1 MUTATED       16     22     11
  HERC1 WILD-TYPE    148    225    132
D650V5, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1            16             148
  CLUS_2            22             225
  CLUS_3            11             132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HERC1 MUTATED        8      8     16     10      7
  HERC1 WILD-TYPE    113     96     75    111    110
D650V6, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1             8             113
  CLUS_2             8              96
  CLUS_3            16              75
  CLUS_4            10             111
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HERC1 MUTATED       14     25     10
  HERC1 WILD-TYPE    145    226    155
D650V7, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1            14             145
  CLUS_2            25             226
  CLUS_3            10             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HERC1 MUTATED        7     20     14      7      1
  HERC1 WILD-TYPE    111    111    137     87     80
D650V8, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1             7             111
  CLUS_2            20             111
  CLUS_3            14             137
  CLUS_4             7              87
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HERC1 MUTATED       11     14      5      4      6
  HERC1 WILD-TYPE    107    122    110     36     65
D650V9, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1            11             107
  CLUS_2            14             122
  CLUS_3             5             110
  CLUS_4             4              36
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HERC1 MUTATED        4     15      9      5      7
  HERC1 WILD-TYPE     44     94    121     96     85
D650V10, multiclass
        clus
vv       HERC1 MUTATED HERC1 WILD-TYPE
  CLUS_1             4              44
  CLUS_2            15              94
  CLUS_3             9             121
  CLUS_4             5              96
  CLUS_5             7              85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(651) Variable = C1ORF14 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF14 MUTATED        0      0      2     14
  C1ORF14 WILD-TYPE    135     92    170    162
D651V1, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF14 MUTATED       10      1      2
  C1ORF14 WILD-TYPE    205    154    160
D651V2, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1              10               205
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF14 MUTATED        4      8      1      0
  C1ORF14 WILD-TYPE    131    116    124     60
D651V3, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               8               116
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF14 MUTATED        8      4      1
  C1ORF14 WILD-TYPE    245     98     88
D651V4, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               4                98
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF14 MUTATED        2      9      4
  C1ORF14 WILD-TYPE    162    238    139
D651V5, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               9               238
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF14 MUTATED        0      2     11      1      1
  C1ORF14 WILD-TYPE    121    102     80    120    116
D651V6, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3              11                80
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF14 MUTATED        0     12      4
  C1ORF14 WILD-TYPE    159    239    161
D651V7, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              12               239
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF14 MUTATED        0      8      5      1      2
  C1ORF14 WILD-TYPE    118    123    146     93     79
D651V8, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               8               123
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF14 MUTATED        0      5      4      1      2
  C1ORF14 WILD-TYPE    118    131    111     39     69
D651V9, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               4               111
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF14 MUTATED        1      5      3      2      1
  C1ORF14 WILD-TYPE     47    104    127     99     91
D651V10, multiclass
        clus
vv       C1ORF14 MUTATED C1ORF14 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               3               127
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(652) Variable = PRPF40B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRPF40B MUTATED        2      0      2     16
  PRPF40B WILD-TYPE    133     92    170    160
D652V1, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4              16               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PRPF40B MUTATED       13      2      2
  PRPF40B WILD-TYPE    202    153    160
D652V2, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1              13               202
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRPF40B MUTATED        9      6      1      1
  PRPF40B WILD-TYPE    126    118    124     59
D652V3, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               9               126
  CLUS_2               6               118
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PRPF40B MUTATED        9      6      2
  PRPF40B WILD-TYPE    244     96     87
D652V4, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               9               244
  CLUS_2               6                96
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PRPF40B MUTATED        3     13      5
  PRPF40B WILD-TYPE    161    234    138
D652V5, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               3               161
  CLUS_2              13               234
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF40B MUTATED        0      5      9      2      5
  PRPF40B WILD-TYPE    121     99     82    119    112
D652V6, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               0               121
  CLUS_2               5                99
  CLUS_3               9                82
  CLUS_4               2               119
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PRPF40B MUTATED        2     15      4
  PRPF40B WILD-TYPE    157    236    161
D652V7, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               2               157
  CLUS_2              15               236
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF40B MUTATED        2     10      5      1      3
  PRPF40B WILD-TYPE    116    121    146     93     78
D652V8, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               2               116
  CLUS_2              10               121
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF40B MUTATED        2      4      3      1      5
  PRPF40B WILD-TYPE    116    132    112     39     66
D652V9, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               132
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRPF40B MUTATED        1      7      3      3      1
  PRPF40B WILD-TYPE     47    102    127     98     91
D652V10, multiclass
        clus
vv       PRPF40B MUTATED PRPF40B WILD-TYPE
  CLUS_1               1                47
  CLUS_2               7               102
  CLUS_3               3               127
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(653) Variable = SERPINA1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINA1 MUTATED        0      0      2      7
  SERPINA1 WILD-TYPE    135     92    170    169
D653V1, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                2                170
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINA1 MUTATED        4      1      0
  SERPINA1 WILD-TYPE    211    154    162
D653V2, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINA1 MUTATED        1      3      3      1
  SERPINA1 WILD-TYPE    134    121    122     59
D653V3, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                3                121
  CLUS_3                3                122
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINA1 MUTATED        4      1      3
  SERPINA1 WILD-TYPE    249    101     86
D653V4, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                1                101
  CLUS_3                3                 86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINA1 MUTATED        1      5      2
  SERPINA1 WILD-TYPE    163    242    141
D653V5, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                5                242
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINA1 MUTATED        0      3      3      1      1
  SERPINA1 WILD-TYPE    121    101     88    120    116
D653V6, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                3                101
  CLUS_3                3                 88
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINA1 MUTATED        1      5      3
  SERPINA1 WILD-TYPE    158    246    162
D653V7, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                5                246
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINA1 MUTATED        1      2      3      1      2
  SERPINA1 WILD-TYPE    117    129    148     93     79
D653V8, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                129
  CLUS_3                3                148
  CLUS_4                1                 93
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINA1 MUTATED        1      2      2      0      0
  SERPINA1 WILD-TYPE    117    134    113     40     71
D653V9, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                134
  CLUS_3                2                113
  CLUS_4                0                 40
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINA1 MUTATED        0      1      1      2      1
  SERPINA1 WILD-TYPE     48    108    129     99     91
D653V10, multiclass
        clus
vv       SERPINA1 MUTATED SERPINA1 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                1                129
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(654) Variable = FZR1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FZR1 MUTATED        1      3      0      7
  FZR1 WILD-TYPE    134     89    172    169
D654V1, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3             89
  CLUS_3            0            172
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZR1 MUTATED        8      2      1
  FZR1 WILD-TYPE    207    153    161
D654V2, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FZR1 MUTATED        4      5      1      0
  FZR1 WILD-TYPE    131    119    124     60
D654V3, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5            119
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZR1 MUTATED        7      3      0
  FZR1 WILD-TYPE    246     99     89
D654V4, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZR1 MUTATED        2      8      2
  FZR1 WILD-TYPE    162    239    141
D654V5, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZR1 MUTATED        0      3      5      2      2
  FZR1 WILD-TYPE    121    101     86    119    115
D654V6, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FZR1 MUTATED        1     10      1
  FZR1 WILD-TYPE    158    241    164
D654V7, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           10            241
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZR1 MUTATED        0      6      4      2      0
  FZR1 WILD-TYPE    118    125    147     92     81
D654V8, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZR1 MUTATED        1      5      1      1      2
  FZR1 WILD-TYPE    117    131    114     39     69
D654V9, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FZR1 MUTATED        0      4      3      1      2
  FZR1 WILD-TYPE     48    105    127    100     90
D654V10, multiclass
        clus
vv       FZR1 MUTATED FZR1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(655) Variable = BRF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRF1 MUTATED        1      1      1      8
  BRF1 WILD-TYPE    134     91    171    168
D655V1, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRF1 MUTATED        5      2      0
  BRF1 WILD-TYPE    210    153    162
D655V2, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRF1 MUTATED        2      4      3      0
  BRF1 WILD-TYPE    133    120    122     60
D655V3, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            4            120
  CLUS_3            3            122
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRF1 MUTATED        4      2      3
  BRF1 WILD-TYPE    249    100     86
D655V4, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRF1 MUTATED        0      5      5
  BRF1 WILD-TYPE    164    242    138
D655V5, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            5            242
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRF1 MUTATED        1      3      2      0      4
  BRF1 WILD-TYPE    120    101     89    121    113
D655V6, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRF1 MUTATED        1      5      5
  BRF1 WILD-TYPE    158    246    160
D655V7, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRF1 MUTATED        3      1      4      0      3
  BRF1 WILD-TYPE    115    130    147     94     78
D655V8, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            1            130
  CLUS_3            4            147
  CLUS_4            0             94
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRF1 MUTATED        1      2      3      0      1
  BRF1 WILD-TYPE    117    134    112     40     70
D655V9, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRF1 MUTATED        0      2      3      2      0
  BRF1 WILD-TYPE     48    107    127     99     92
D655V10, multiclass
        clus
vv       BRF1 MUTATED BRF1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(656) Variable = ESRP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESRP1 MUTATED        3      1      1      6
  ESRP1 WILD-TYPE    132     91    171    170
D656V1, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ESRP1 MUTATED        6      0      2
  ESRP1 WILD-TYPE    209    155    160
D656V2, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ESRP1 MUTATED        4      4      1      2
  ESRP1 WILD-TYPE    131    120    124     58
D656V3, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ESRP1 MUTATED        8      2      1
  ESRP1 WILD-TYPE    245    100     88
D656V4, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ESRP1 MUTATED        1      7      2
  ESRP1 WILD-TYPE    163    240    141
D656V5, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ESRP1 MUTATED        1      1      5      1      2
  ESRP1 WILD-TYPE    120    103     86    120    115
D656V6, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ESRP1 MUTATED        2      7      2
  ESRP1 WILD-TYPE    157    244    163
D656V7, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ESRP1 MUTATED        1      5      4      0      1
  ESRP1 WILD-TYPE    117    126    147     94     80
D656V8, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ESRP1 MUTATED        1      2      0      1      3
  ESRP1 WILD-TYPE    117    134    115     39     68
D656V9, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ESRP1 MUTATED        2      2      3      0      0
  ESRP1 WILD-TYPE     46    107    127    101     92
D656V10, multiclass
        clus
vv       ESRP1 MUTATED ESRP1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(657) Variable = P2RY4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  P2RY4 MUTATED        2      1      3      7
  P2RY4 WILD-TYPE    133     91    169    169
D657V1, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RY4 MUTATED        6      3      3
  P2RY4 WILD-TYPE    209    152    159
D657V2, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  P2RY4 MUTATED        3      2      2      2
  P2RY4 WILD-TYPE    132    122    123     58
D657V3, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RY4 MUTATED        8      1      0
  P2RY4 WILD-TYPE    245    101     89
D657V4, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RY4 MUTATED        2      6      4
  P2RY4 WILD-TYPE    162    241    139
D657V5, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RY4 MUTATED        2      4      1      1      4
  P2RY4 WILD-TYPE    119    100     90    120    113
D657V6, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             1              90
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RY4 MUTATED        2      8      3
  P2RY4 WILD-TYPE    157    243    162
D657V7, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RY4 MUTATED        3      2      6      1      1
  P2RY4 WILD-TYPE    115    129    145     93     80
D657V8, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             2             129
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RY4 MUTATED        1      5      2      2      2
  P2RY4 WILD-TYPE    117    131    113     38     69
D657V9, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RY4 MUTATED        2      3      3      3      1
  P2RY4 WILD-TYPE     46    106    127     98     91
D657V10, multiclass
        clus
vv       P2RY4 MUTATED P2RY4 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(658) Variable = EPHA3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHA3 MUTATED       10      7      5     14
  EPHA3 WILD-TYPE    125     85    167    162
D658V1, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             7              85
  CLUS_3             5             167
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA3 MUTATED       19      9      4
  EPHA3 WILD-TYPE    196    146    158
D658V2, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             9             146
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHA3 MUTATED       12     16      3      1
  EPHA3 WILD-TYPE    123    108    122     59
D658V3, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1            12             123
  CLUS_2            16             108
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA3 MUTATED       19     11      2
  EPHA3 WILD-TYPE    234     91     87
D658V4, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1            19             234
  CLUS_2            11              91
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA3 MUTATED        8     23      3
  EPHA3 WILD-TYPE    156    224    140
D658V5, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1             8             156
  CLUS_2            23             224
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA3 MUTATED        5     11     10      4      4
  EPHA3 WILD-TYPE    116     93     81    117    113
D658V6, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1             5             116
  CLUS_2            11              93
  CLUS_3            10              81
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHA3 MUTATED        5     25      6
  EPHA3 WILD-TYPE    154    226    159
D658V7, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            25             226
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA3 MUTATED        6     11     13      3      3
  EPHA3 WILD-TYPE    112    120    138     91     78
D658V8, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1             6             112
  CLUS_2            11             120
  CLUS_3            13             138
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA3 MUTATED        3     12      2      3      9
  EPHA3 WILD-TYPE    115    124    113     37     62
D658V9, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            12             124
  CLUS_3             2             113
  CLUS_4             3              37
  CLUS_5             9              62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHA3 MUTATED        3     10     12      1      3
  EPHA3 WILD-TYPE     45     99    118    100     89
D658V10, multiclass
        clus
vv       EPHA3 MUTATED EPHA3 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            10              99
  CLUS_3            12             118
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(659) Variable = IDE MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDE MUTATED        1      3      2      9
  IDE WILD-TYPE    134     89    170    167
D659V1, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           1           134
  CLUS_2           3            89
  CLUS_3           2           170
  CLUS_4           9           167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IDE MUTATED        7      3      3
  IDE WILD-TYPE    208    152    159
D659V2, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           7           208
  CLUS_2           3           152
  CLUS_3           3           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IDE MUTATED        6      6      1      0
  IDE WILD-TYPE    129    118    124     60
D659V3, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           6           129
  CLUS_2           6           118
  CLUS_3           1           124
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IDE MUTATED       10      3      0
  IDE WILD-TYPE    243     99     89
D659V4, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1          10           243
  CLUS_2           3            99
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IDE MUTATED        5      7      3
  IDE WILD-TYPE    159    240    140
D659V5, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           5           159
  CLUS_2           7           240
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDE MUTATED        1      2      6      4      2
  IDE WILD-TYPE    120    102     85    117    115
D659V6, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           1           120
  CLUS_2           2           102
  CLUS_3           6            85
  CLUS_4           4           117
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IDE MUTATED        5      8      2
  IDE WILD-TYPE    154    243    163
D659V7, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           5           154
  CLUS_2           8           243
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDE MUTATED        2      5      3      3      2
  IDE WILD-TYPE    116    126    148     91     79
D659V8, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           2           116
  CLUS_2           5           126
  CLUS_3           3           148
  CLUS_4           3            91
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDE MUTATED        3      3      3      3      0
  IDE WILD-TYPE    115    133    112     37     71
D659V9, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           3           115
  CLUS_2           3           133
  CLUS_3           3           112
  CLUS_4           3            37
  CLUS_5           0            71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IDE MUTATED        1      5      1      2      3
  IDE WILD-TYPE     47    104    129     99     89
D659V10, multiclass
        clus
vv       IDE MUTATED IDE WILD-TYPE
  CLUS_1           1            47
  CLUS_2           5           104
  CLUS_3           1           129
  CLUS_4           2            99
  CLUS_5           3            89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(660) Variable = C15ORF52 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C15ORF52 MUTATED        1      0      0      6
  C15ORF52 WILD-TYPE    134     92    172    170
D660V1, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C15ORF52 MUTATED        5      1      0
  C15ORF52 WILD-TYPE    210    154    162
D660V2, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                1                154
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C15ORF52 MUTATED        3      3      0      0
  C15ORF52 WILD-TYPE    132    121    125     60
D660V3, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C15ORF52 MUTATED        4      2      0
  C15ORF52 WILD-TYPE    249    100     89
D660V4, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C15ORF52 MUTATED        1      5      1
  C15ORF52 WILD-TYPE    163    242    142
D660V5, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                5                242
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C15ORF52 MUTATED        0      1      4      1      1
  C15ORF52 WILD-TYPE    121    103     87    120    116
D660V6, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                4                 87
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C15ORF52 MUTATED        1      4      2
  C15ORF52 WILD-TYPE    158    247    163
D660V7, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C15ORF52 MUTATED        0      3      3      1      0
  C15ORF52 WILD-TYPE    118    128    148     93     81
D660V8, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                128
  CLUS_3                3                148
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C15ORF52 MUTATED        1      3      1      1      0
  C15ORF52 WILD-TYPE    117    133    114     39     71
D660V9, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                133
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C15ORF52 MUTATED        0      3      2      0      1
  C15ORF52 WILD-TYPE     48    106    128    101     91
D660V10, multiclass
        clus
vv       C15ORF52 MUTATED C15ORF52 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(661) Variable = MARVELD3 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MARVELD3 MUTATED        3      1      2      7
  MARVELD3 WILD-TYPE    132     91    170    169
D661V1, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  MARVELD3 MUTATED        9      3      0
  MARVELD3 WILD-TYPE    206    152    162
D661V2, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                3                152
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MARVELD3 MUTATED        4      5      2      1
  MARVELD3 WILD-TYPE    131    119    123     59
D661V3, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                5                119
  CLUS_3                2                123
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  MARVELD3 MUTATED        6      5      1
  MARVELD3 WILD-TYPE    247     97     88
D661V4, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                6                247
  CLUS_2                5                 97
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  MARVELD3 MUTATED        2      9      2
  MARVELD3 WILD-TYPE    162    238    141
D661V5, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                9                238
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARVELD3 MUTATED        2      3      6      1      1
  MARVELD3 WILD-TYPE    119    101     85    120    116
D661V6, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                3                101
  CLUS_3                6                 85
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  MARVELD3 MUTATED        3     10      1
  MARVELD3 WILD-TYPE    156    241    164
D661V7, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               10                241
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARVELD3 MUTATED        2      8      2      1      1
  MARVELD3 WILD-TYPE    116    123    149     93     80
D661V8, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                8                123
  CLUS_3                2                149
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARVELD3 MUTATED        3      5      0      0      3
  MARVELD3 WILD-TYPE    115    131    115     40     68
D661V9, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                5                131
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MARVELD3 MUTATED        1      7      2      0      1
  MARVELD3 WILD-TYPE     47    102    128    101     91
D661V10, multiclass
        clus
vv       MARVELD3 MUTATED MARVELD3 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                7                102
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(662) Variable = C1ORF141 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF141 MUTATED        2      2      2      6
  C1ORF141 WILD-TYPE    133     90    170    170
D662V1, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                 90
  CLUS_3                2                170
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF141 MUTATED        8      0      3
  C1ORF141 WILD-TYPE    207    155    159
D662V2, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                8                207
  CLUS_2                0                155
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF141 MUTATED        8      4      0      0
  C1ORF141 WILD-TYPE    127    120    125     60
D662V3, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                8                127
  CLUS_2                4                120
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF141 MUTATED       10      2      0
  C1ORF141 WILD-TYPE    243    100     89
D662V4, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1               10                243
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF141 MUTATED        1      7      3
  C1ORF141 WILD-TYPE    163    240    140
D662V5, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                7                240
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF141 MUTATED        1      1      8      0      1
  C1ORF141 WILD-TYPE    120    103     83    121    116
D662V6, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                8                 83
  CLUS_4                0                121
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF141 MUTATED        0     10      2
  C1ORF141 WILD-TYPE    159    241    163
D662V7, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                0                159
  CLUS_2               10                241
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF141 MUTATED        0      7      4      0      1
  C1ORF141 WILD-TYPE    118    124    147     94     80
D662V8, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                7                124
  CLUS_3                4                147
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF141 MUTATED        0      5      0      2      3
  C1ORF141 WILD-TYPE    118    131    115     38     68
D662V9, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                5                131
  CLUS_3                0                115
  CLUS_4                2                 38
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF141 MUTATED        2      3      4      1      0
  C1ORF141 WILD-TYPE     46    106    126    100     92
D662V10, multiclass
        clus
vv       C1ORF141 MUTATED C1ORF141 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                3                106
  CLUS_3                4                126
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(663) Variable = PKN1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKN1 MUTATED        1      0      1      9
  PKN1 WILD-TYPE    134     92    171    167
D663V1, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN1 MUTATED        5      1      1
  PKN1 WILD-TYPE    210    154    161
D663V2, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKN1 MUTATED        3      3      2      1
  PKN1 WILD-TYPE    132    121    123     59
D663V3, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN1 MUTATED        7      0      2
  PKN1 WILD-TYPE    246    102     87
D663V4, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN1 MUTATED        3      5      2
  PKN1 WILD-TYPE    161    242    141
D663V5, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            5            242
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN1 MUTATED        1      2      4      1      2
  PKN1 WILD-TYPE    120    102     87    120    115
D663V6, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN1 MUTATED        2      6      3
  PKN1 WILD-TYPE    157    245    162
D663V7, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN1 MUTATED        2      4      4      1      0
  PKN1 WILD-TYPE    116    127    147     93     81
D663V8, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            4            147
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN1 MUTATED        1      3      1      0      3
  PKN1 WILD-TYPE    117    133    114     40     68
D663V9, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN1 MUTATED        0      3      2      2      1
  PKN1 WILD-TYPE     48    106    128     99     91
D663V10, multiclass
        clus
vv       PKN1 MUTATED PKN1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(664) Variable = PCF11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCF11 MUTATED        4      2      1     16
  PCF11 WILD-TYPE    131     90    171    160
D664V1, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCF11 MUTATED       12      4      3
  PCF11 WILD-TYPE    203    151    159
D664V2, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCF11 MUTATED       11      4      3      1
  PCF11 WILD-TYPE    124    120    122     59
D664V3, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCF11 MUTATED       13      3      3
  PCF11 WILD-TYPE    240     99     86
D664V4, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             3              99
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCF11 MUTATED        3     11      7
  PCF11 WILD-TYPE    161    236    136
D664V5, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            11             236
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCF11 MUTATED        4      4      7      1      5
  PCF11 WILD-TYPE    117    100     84    120    112
D664V6, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PCF11 MUTATED        2     16      5
  PCF11 WILD-TYPE    157    235    160
D664V7, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            16             235
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCF11 MUTATED        3      9      7      1      3
  PCF11 WILD-TYPE    115    122    144     93     78
D664V8, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCF11 MUTATED        2      7      4      1      3
  PCF11 WILD-TYPE    116    129    111     39     68
D664V9, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             129
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCF11 MUTATED        4      4      5      3      1
  PCF11 WILD-TYPE     44    105    125     98     91
D664V10, multiclass
        clus
vv       PCF11 MUTATED PCF11 WILD-TYPE
  CLUS_1             4              44
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(665) Variable = RASSF5 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASSF5 MUTATED        1      0      1      4
  RASSF5 WILD-TYPE    134     92    171    172
D665V1, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASSF5 MUTATED        4      1      1
  RASSF5 WILD-TYPE    211    154    161
D665V2, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RASSF5 MUTATED        4      1      0      0
  RASSF5 WILD-TYPE    131    123    125     60
D665V3, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASSF5 MUTATED        4      1      0
  RASSF5 WILD-TYPE    249    101     89
D665V4, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASSF5 MUTATED        1      2      3
  RASSF5 WILD-TYPE    163    245    140
D665V5, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              2              245
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASSF5 MUTATED        0      0      2      1      3
  RASSF5 WILD-TYPE    121    104     89    120    114
D665V6, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RASSF5 MUTATED        1      3      2
  RASSF5 WILD-TYPE    158    248    163
D665V7, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              3              248
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASSF5 MUTATED        0      1      2      1      2
  RASSF5 WILD-TYPE    118    130    149     93     79
D665V8, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASSF5 MUTATED        1      0      2      1      2
  RASSF5 WILD-TYPE    117    136    113     39     69
D665V9, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              0              136
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RASSF5 MUTATED        0      1      3      1      1
  RASSF5 WILD-TYPE     48    108    127    100     91
D665V10, multiclass
        clus
vv       RASSF5 MUTATED RASSF5 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(666) Variable = SLC10A6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC10A6 MUTATED        2      2      0      5
  SLC10A6 WILD-TYPE    133     90    172    171
D666V1, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC10A6 MUTATED        8      0      1
  SLC10A6 WILD-TYPE    207    155    161
D666V2, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC10A6 MUTATED        4      2      0      1
  SLC10A6 WILD-TYPE    131    122    125     59
D666V3, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC10A6 MUTATED        7      0      0
  SLC10A6 WILD-TYPE    246    102     89
D666V4, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC10A6 MUTATED        1      9      0
  SLC10A6 WILD-TYPE    163    238    143
D666V5, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC10A6 MUTATED        1      4      5      0      0
  SLC10A6 WILD-TYPE    120    100     86    121    117
D666V6, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               4               100
  CLUS_3               5                86
  CLUS_4               0               121
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC10A6 MUTATED        0     10      0
  SLC10A6 WILD-TYPE    159    241    165
D666V7, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              10               241
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC10A6 MUTATED        2      8      0      0      0
  SLC10A6 WILD-TYPE    116    123    151     94     81
D666V8, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               8               123
  CLUS_3               0               151
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC10A6 MUTATED        0      7      0      2      0
  SLC10A6 WILD-TYPE    118    129    115     38     71
D666V9, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               7               129
  CLUS_3               0               115
  CLUS_4               2                38
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC10A6 MUTATED        2      5      2      0      0
  SLC10A6 WILD-TYPE     46    104    128    101     92
D666V10, multiclass
        clus
vv       SLC10A6 MUTATED SLC10A6 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               5               104
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(667) Variable = OSGEPL1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSGEPL1 MUTATED        2      0      0      2
  OSGEPL1 WILD-TYPE    133     92    172    174
D667V1, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  OSGEPL1 MUTATED        2      1      1
  OSGEPL1 WILD-TYPE    213    154    161
D667V2, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSGEPL1 MUTATED        1      3      0      0
  OSGEPL1 WILD-TYPE    134    121    125     60
D667V3, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  OSGEPL1 MUTATED        3      1      0
  OSGEPL1 WILD-TYPE    250    101     89
D667V4, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  OSGEPL1 MUTATED        0      2      1
  OSGEPL1 WILD-TYPE    164    245    142
D667V5, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               2               245
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSGEPL1 MUTATED        1      0      1      0      1
  OSGEPL1 WILD-TYPE    120    104     90    121    116
D667V6, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               1                90
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  OSGEPL1 MUTATED        0      3      1
  OSGEPL1 WILD-TYPE    159    248    164
D667V7, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               3               248
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSGEPL1 MUTATED        1      1      1      0      1
  OSGEPL1 WILD-TYPE    117    130    150     94     80
D667V8, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSGEPL1 MUTATED        0      1      0      1      2
  OSGEPL1 WILD-TYPE    118    135    115     39     69
D667V9, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSGEPL1 MUTATED        1      1      1      1      0
  OSGEPL1 WILD-TYPE     47    108    129    100     92
D667V10, multiclass
        clus
vv       OSGEPL1 MUTATED OSGEPL1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(668) Variable = TSSK2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TSSK2 MUTATED        1      0      1      8
  TSSK2 WILD-TYPE    134     92    171    168
D668V1, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TSSK2 MUTATED        6      0      1
  TSSK2 WILD-TYPE    209    155    161
D668V2, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TSSK2 MUTATED        4      2      1      0
  TSSK2 WILD-TYPE    131    122    124     60
D668V3, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TSSK2 MUTATED        5      1      1
  TSSK2 WILD-TYPE    248    101     88
D668V4, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TSSK2 MUTATED        0      7      3
  TSSK2 WILD-TYPE    164    240    140
D668V5, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TSSK2 MUTATED        1      4      3      0      2
  TSSK2 WILD-TYPE    120    100     88    121    115
D668V6, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TSSK2 MUTATED        0      7      3
  TSSK2 WILD-TYPE    159    244    162
D668V7, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TSSK2 MUTATED        2      5      1      0      2
  TSSK2 WILD-TYPE    116    126    150     94     79
D668V8, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TSSK2 MUTATED        0      3      2      0      0
  TSSK2 WILD-TYPE    118    133    113     40     71
D668V9, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TSSK2 MUTATED        0      3      0      2      0
  TSSK2 WILD-TYPE     48    106    130     99     92
D668V10, multiclass
        clus
vv       TSSK2 MUTATED TSSK2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             0             130
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(669) Variable = DNAJC1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAJC1 MUTATED        0      0      2     12
  DNAJC1 WILD-TYPE    135     92    170    164
D669V1, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJC1 MUTATED        8      2      3
  DNAJC1 WILD-TYPE    207    153    159
D669V2, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAJC1 MUTATED        6      4      0      1
  DNAJC1 WILD-TYPE    129    120    125     59
D669V3, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJC1 MUTATED        8      3      0
  DNAJC1 WILD-TYPE    245     99     89
D669V4, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJC1 MUTATED        3      6      5
  DNAJC1 WILD-TYPE    161    241    138
D669V5, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJC1 MUTATED        0      3      6      2      3
  DNAJC1 WILD-TYPE    121    101     85    119    114
D669V6, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              6               85
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJC1 MUTATED        2      8      4
  DNAJC1 WILD-TYPE    157    243    161
D669V7, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJC1 MUTATED        0      5      5      2      2
  DNAJC1 WILD-TYPE    118    126    146     92     79
D669V8, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              5              146
  CLUS_4              2               92
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJC1 MUTATED        2      3      3      1      4
  DNAJC1 WILD-TYPE    116    133    112     39     67
D669V9, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              133
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJC1 MUTATED        1      4      4      2      2
  DNAJC1 WILD-TYPE     47    105    126     99     90
D669V10, multiclass
        clus
vv       DNAJC1 MUTATED DNAJC1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(670) Variable = KPNA3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KPNA3 MUTATED        1      1      3      5
  KPNA3 WILD-TYPE    134     91    169    171
D670V1, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA3 MUTATED        4      1      1
  KPNA3 WILD-TYPE    211    154    161
D670V2, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KPNA3 MUTATED        1      6      1      2
  KPNA3 WILD-TYPE    134    118    124     58
D670V3, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA3 MUTATED        7      2      1
  KPNA3 WILD-TYPE    246    100     88
D670V4, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA3 MUTATED        1      7      1
  KPNA3 WILD-TYPE    163    240    142
D670V5, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA3 MUTATED        3      1      4      1      0
  KPNA3 WILD-TYPE    118    103     87    120    117
D670V6, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KPNA3 MUTATED        2      7      1
  KPNA3 WILD-TYPE    157    244    164
D670V7, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA3 MUTATED        1      4      3      1      1
  KPNA3 WILD-TYPE    117    127    148     93     80
D670V8, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA3 MUTATED        1      2      1      0      2
  KPNA3 WILD-TYPE    117    134    114     40     69
D670V9, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KPNA3 MUTATED        0      2      3      0      1
  KPNA3 WILD-TYPE     48    107    127    101     91
D670V10, multiclass
        clus
vv       KPNA3 MUTATED KPNA3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(671) Variable = RRH MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRH MUTATED        2      0      0      3
  RRH WILD-TYPE    133     92    172    173
D671V1, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           2           133
  CLUS_2           0            92
  CLUS_3           0           172
  CLUS_4           3           173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RRH MUTATED        4      0      0
  RRH WILD-TYPE    211    155    162
D671V2, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           4           211
  CLUS_2           0           155
  CLUS_3           0           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRH MUTATED        1      2      2      0
  RRH WILD-TYPE    134    122    123     60
D671V3, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           1           134
  CLUS_2           2           122
  CLUS_3           2           123
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RRH MUTATED        3      2      0
  RRH WILD-TYPE    250    100     89
D671V4, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           3           250
  CLUS_2           2           100
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RRH MUTATED        1      2      2
  RRH WILD-TYPE    163    245    141
D671V5, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           1           163
  CLUS_2           2           245
  CLUS_3           2           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRH MUTATED        0      2      2      0      1
  RRH WILD-TYPE    121    102     89    121    116
D671V6, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           0           121
  CLUS_2           2           102
  CLUS_3           2            89
  CLUS_4           0           121
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  RRH MUTATED        1      2      2
  RRH WILD-TYPE    158    249    163
D671V7, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           1           158
  CLUS_2           2           249
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRH MUTATED        1      1      2      0      1
  RRH WILD-TYPE    117    130    149     94     80
D671V8, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           1           117
  CLUS_2           1           130
  CLUS_3           2           149
  CLUS_4           0            94
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRH MUTATED        1      1      1      0      1
  RRH WILD-TYPE    117    135    114     40     70
D671V9, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           1           117
  CLUS_2           1           135
  CLUS_3           1           114
  CLUS_4           0            40
  CLUS_5           1            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRH MUTATED        0      2      1      1      0
  RRH WILD-TYPE     48    107    129    100     92
D671V10, multiclass
        clus
vv       RRH MUTATED RRH WILD-TYPE
  CLUS_1           0            48
  CLUS_2           2           107
  CLUS_3           1           129
  CLUS_4           1           100
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(672) Variable = SRP14 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRP14 MUTATED        0      0      1      2
  SRP14 WILD-TYPE    135     92    171    174
D672V1, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP14 MUTATED        2      1      0
  SRP14 WILD-TYPE    213    154    162
D672V2, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRP14 MUTATED        2      0      0      0
  SRP14 WILD-TYPE    133    124    125     60
D672V3, multiclass
[1] "Remove cluster labels:" "SRP14 MUTATED"         
clus
  SRP14 MUTATED SRP14 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4305      TCGA-CG-4306      TCGA-CG-4436      TCGA-CG-4437 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4438      TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4449      TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4466      TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4476      TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-6527      TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-6818      TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-8572      TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-8578      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-A4YX      TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-A748      TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6177 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-FP-7916      TCGA-FP-7998      TCGA-HF-7131      TCGA-HF-7132 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HF-7133      TCGA-HF-7134      TCGA-HF-7136      TCGA-HF-A5NB 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HJ-7597      TCGA-HU-8602      TCGA-HU-8608      TCGA-HU-8610 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HU-A4GF      TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A97H      TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-8462      TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-KB-A93G      TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A43I      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP14 MUTATED        2      0      0
  SRP14 WILD-TYPE    251    102     89
D672V4, multiclass
[1] "Remove cluster labels:" "SRP14 MUTATED"         
clus
  SRP14 MUTATED SRP14 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4305      TCGA-CG-4306      TCGA-CG-4436      TCGA-CG-4437 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4438      TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4449      TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4466      TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-4476      TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-6527      TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-6818      TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-8572      TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-8578      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-A4YX      TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-D7-A748      TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6177 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-FP-7916      TCGA-FP-7998      TCGA-HF-7131      TCGA-HF-7132 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HF-7133      TCGA-HF-7134      TCGA-HF-7136      TCGA-HF-A5NB 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HJ-7597      TCGA-HU-8602      TCGA-HU-8608      TCGA-HU-8610 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HU-A4GF      TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IG-A97H      TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-8462      TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-KB-A93G      TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A43I      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"SRP14 WILD-TYPE" "SRP14 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP14 MUTATED        1      1      1
  SRP14 WILD-TYPE    163    246    142
D672V5, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             1             246
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP14 MUTATED        0      0      1      1      1
  SRP14 WILD-TYPE    121    104     90    120    116
D672V6, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             1              90
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP14 MUTATED        1      1      1
  SRP14 WILD-TYPE    158    250    164
D672V7, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             1             250
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP14 MUTATED        0      1      0      1      1
  SRP14 WILD-TYPE    118    130    151     93     80
D672V8, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             0             151
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP14 MUTATED        1      1      1      0      0
  SRP14 WILD-TYPE    117    135    114     40     71
D672V9, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP14 MUTATED        0      1      0      1      1
  SRP14 WILD-TYPE     48    108    130    100     91
D672V10, multiclass
        clus
vv       SRP14 MUTATED SRP14 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(673) Variable = PDE8A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDE8A MUTATED        1      0      2     11
  PDE8A WILD-TYPE    134     92    170    165
D673V1, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDE8A MUTATED        6      2      3
  PDE8A WILD-TYPE    209    153    159
D673V2, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDE8A MUTATED        4      3      1      3
  PDE8A WILD-TYPE    131    121    124     57
D673V3, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDE8A MUTATED        8      2      1
  PDE8A WILD-TYPE    245    100     88
D673V4, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDE8A MUTATED        3      7      4
  PDE8A WILD-TYPE    161    240    139
D673V5, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDE8A MUTATED        2      2      4      2      4
  PDE8A WILD-TYPE    119    102     87    119    113
D673V6, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PDE8A MUTATED        2      7      5
  PDE8A WILD-TYPE    157    244    160
D673V7, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDE8A MUTATED        1      5      5      2      1
  PDE8A WILD-TYPE    117    126    146     92     80
D673V8, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDE8A MUTATED        1      2      2      1      3
  PDE8A WILD-TYPE    117    134    113     39     68
D673V9, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDE8A MUTATED        0      1      5      1      2
  PDE8A WILD-TYPE     48    108    125    100     90
D673V10, multiclass
        clus
vv       PDE8A MUTATED PDE8A WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(674) Variable = ARPC5L MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARPC5L MUTATED        0      0      0      3
  ARPC5L WILD-TYPE    135     92    172    173
D674V1, multiclass
        clus
vv       ARPC5L MUTATED ARPC5L WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARPC5L MUTATED        2      0      0
  ARPC5L WILD-TYPE    213    155    162
D674V2, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               2              530 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7716       TCGA-BR-7717       TCGA-BR-7722       TCGA-BR-7723 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7851       TCGA-BR-7901       TCGA-BR-7957       TCGA-BR-7958 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7959       TCGA-BR-8058       TCGA-BR-8059       TCGA-BR-8060 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8077       TCGA-BR-8080       TCGA-BR-8081       TCGA-BR-8284 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8285       TCGA-BR-8286       TCGA-BR-8289       TCGA-BR-8291 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360       TCGA-BR-8361 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365       TCGA-BR-8366 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8367       TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8371       TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486       TCGA-BR-8487 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8588       TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8591 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8686       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A44U       TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4CR       TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IY       TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J4       TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QI       TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5799       TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5803       TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8525       TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8528 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8529       TCGA-CD-8530       TCGA-CD-8531       TCGA-CD-8532 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8533       TCGA-CD-8534       TCGA-CD-8535       TCGA-CD-8536 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A486       TCGA-CD-A487       TCGA-CD-A489       TCGA-CD-A48A 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A4MJ       TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-5716 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719       TCGA-CG-5720 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723       TCGA-CG-5724 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727       TCGA-CG-5728 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733       TCGA-CG-5734 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579       TCGA-D7-6518 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521       TCGA-D7-6522 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526       TCGA-D7-6527 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YV       TCGA-D7-A4YX       TCGA-D7-A4YY       TCGA-D7-A4Z0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6ET       TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A748       TCGA-D7-A74A       TCGA-D7-A74B       TCGA-EQ-5647 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-EQ-8122       TCGA-EQ-A4SO       TCGA-F1-6177       TCGA-F1-6874 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6875       TCGA-F1-A448       TCGA-F1-A72C       TCGA-FP-7735 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7829       TCGA-FP-7916       TCGA-FP-7998       TCGA-FP-8099 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-8209       TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-A4BE       TCGA-FP-A4BF       TCGA-FP-A8CX       TCGA-FP-A9TM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7133       TCGA-HF-7134 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7136       TCGA-HF-A5NB       TCGA-HJ-7597       TCGA-HU-8238 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8243       TCGA-HU-8244       TCGA-HU-8249       TCGA-HU-8602 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-8610       TCGA-HU-A4G2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4G3       TCGA-HU-A4G6       TCGA-HU-A4G8       TCGA-HU-A4G9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF       TCGA-HU-A4GH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GP       TCGA-HU-A4GQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GT       TCGA-HU-A4GU       TCGA-HU-A4GX       TCGA-HU-A4GY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H0       TCGA-HU-A4H2       TCGA-HU-A4H3       TCGA-HU-A4H4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4HD       TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RL       TCGA-IN-A6RN       TCGA-IN-A6RO       TCGA-IN-A6RP 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RR       TCGA-IN-A6RS       TCGA-IN-A7NR       TCGA-IN-A7NT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A93F       TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A93J       TCGA-KH-A6WC       TCGA-L5-A43C       TCGA-L5-A43E 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43H       TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OE       TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OI       TCGA-L5-A4OJ       TCGA-L5-A4OM       TCGA-L5-A4ON 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ       TCGA-L5-A4OR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU       TCGA-L5-A4OW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T       TCGA-L5-A88V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z       TCGA-L5-A891 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ       TCGA-L5-A8NK 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W       TCGA-LN-A49X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-MX-A5UJ       TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Q9-A6FW       TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7ZI       TCGA-R5-A7ZR       TCGA-R5-A805       TCGA-R6-A6DN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6DQ       TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6XG       TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A8W5       TCGA-R6-A8W8       TCGA-R6-A8WC       TCGA-R6-A8WG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7BS       TCGA-RD-A7BT       TCGA-RD-A7BW       TCGA-RD-A7C1 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0       TCGA-RD-A8N1 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N2       TCGA-RD-A8N4       TCGA-RD-A8N5       TCGA-RD-A8N6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N9       TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-V5-A7RE       TCGA-V5-AASV       TCGA-V5-AASW       TCGA-V5-AASX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DL       TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8DV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DZ       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARPC5L MUTATED        1      0      0      0
  ARPC5L WILD-TYPE    134    124    125     60
D674V3, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               1              443 
      TCGA-2H-A9GF       TCGA-2H-A9GI       TCGA-2H-A9GL       TCGA-2H-A9GQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GR       TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TJ       TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-4183 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4184       TCGA-BR-4187       TCGA-BR-4188       TCGA-BR-4191 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4201       TCGA-BR-4253       TCGA-BR-4255       TCGA-BR-4256 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4257       TCGA-BR-4267       TCGA-BR-4279       TCGA-BR-4280 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4294       TCGA-BR-4357       TCGA-BR-4361       TCGA-BR-4362 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4363       TCGA-BR-4366       TCGA-BR-4368       TCGA-BR-4369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4370       TCGA-BR-4371       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6564       TCGA-BR-6565       TCGA-BR-6566 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707       TCGA-BR-6709 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802       TCGA-BR-6803 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197       TCGA-BR-7703 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7704       TCGA-BR-7715       TCGA-BR-7716       TCGA-BR-7717 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7722       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8080       TCGA-BR-8081 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8284       TCGA-BR-8285       TCGA-BR-8286       TCGA-BR-8289 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8366       TCGA-BR-8367       TCGA-BR-8368       TCGA-BR-8369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8370       TCGA-BR-8371       TCGA-BR-8372       TCGA-BR-8380 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486       TCGA-BR-8588 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8591       TCGA-BR-8592 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678       TCGA-BR-8679 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683       TCGA-BR-8686 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A44U 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2       TCGA-BR-A4J4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7       TCGA-BR-A4J8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF       TCGA-BR-A4QI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8528       TCGA-CD-8529 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8530       TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8534       TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A487       TCGA-CD-A489       TCGA-CD-A48A       TCGA-CD-A48C 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI       TCGA-CD-A4MJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4300       TCGA-CG-4301       TCGA-CG-4304       TCGA-CG-4305 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4306       TCGA-CG-4436       TCGA-CG-4437       TCGA-CG-4438 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4442       TCGA-CG-4443       TCGA-CG-4444       TCGA-CG-4449 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4455       TCGA-CG-4460       TCGA-CG-4465       TCGA-CG-4466 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4469       TCGA-CG-4474       TCGA-CG-4475       TCGA-CG-4476 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4477       TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5719       TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5723 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6527 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8578 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV       TCGA-D7-A4YX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6EV       TCGA-D7-A6EX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A748 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-EQ-8122       TCGA-EQ-A4SO       TCGA-F1-6177       TCGA-F1-6874 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6875       TCGA-F1-A448       TCGA-F1-A72C       TCGA-FP-7916 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7998       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7133 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HF-A5NB       TCGA-HJ-7597 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8608       TCGA-HU-8610       TCGA-HU-A4GF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GQ       TCGA-HU-A4GT       TCGA-HU-A4GU       TCGA-HU-A4GX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H3       TCGA-HU-A4H4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4HD       TCGA-IC-A6RE       TCGA-IC-A6RF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3I8       TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3YB       TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A4QT       TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A5S3       TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A8O2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RO       TCGA-IN-A6RR       TCGA-IN-A6RS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NR       TCGA-IN-A7NT       TCGA-IN-A7NU       TCGA-IN-AB1V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-AB1X       TCGA-IP-7968       TCGA-JY-A6F8       TCGA-JY-A6FA 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FB       TCGA-JY-A6FD       TCGA-JY-A6FE       TCGA-JY-A6FG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93E       TCGA-JY-A93F       TCGA-KB-A6F5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A93G       TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OJ       TCGA-L5-A4ON       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88W       TCGA-L5-A891 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NQ       TCGA-L5-A8NS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NT       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49X       TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A3       TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-RD-A7BS       TCGA-RD-A7BT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7BW       TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N0       TCGA-RD-A8N1       TCGA-RE-A7BO       TCGA-S8-A6BV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-S8-A6BW       TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-VQ-A8DL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8E2       TCGA-VQ-A8E7 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8P2       TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PM       TCGA-VQ-A8PQ       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-AA64       TCGA-VQ-AA69       TCGA-VQ-AA6A 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6B       TCGA-VQ-AA6F       TCGA-VQ-AA6G       TCGA-VQ-AA6I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6K       TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8Q7       TCGA-VR-AA4D       TCGA-VR-AA7B       TCGA-X8-AAAR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-Z6-A8JD       TCGA-Z6-A8JE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A9VB       TCGA-Z6-AAPN       TCGA-ZA-A8F6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARPC5L MUTATED        1      0      0
  ARPC5L WILD-TYPE    252    102     89
D674V4, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               1              443 
      TCGA-2H-A9GF       TCGA-2H-A9GI       TCGA-2H-A9GL       TCGA-2H-A9GQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GR       TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TJ       TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-4183 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4184       TCGA-BR-4187       TCGA-BR-4188       TCGA-BR-4191 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4201       TCGA-BR-4253       TCGA-BR-4255       TCGA-BR-4256 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4257       TCGA-BR-4267       TCGA-BR-4279       TCGA-BR-4280 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4294       TCGA-BR-4357       TCGA-BR-4361       TCGA-BR-4362 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4363       TCGA-BR-4366       TCGA-BR-4368       TCGA-BR-4369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4370       TCGA-BR-4371       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6564       TCGA-BR-6565       TCGA-BR-6566 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707       TCGA-BR-6709 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802       TCGA-BR-6803 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197       TCGA-BR-7703 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7704       TCGA-BR-7715       TCGA-BR-7716       TCGA-BR-7717 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7722       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8080       TCGA-BR-8081 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8284       TCGA-BR-8285       TCGA-BR-8286       TCGA-BR-8289 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8366       TCGA-BR-8367       TCGA-BR-8368       TCGA-BR-8369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8370       TCGA-BR-8371       TCGA-BR-8372       TCGA-BR-8380 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486       TCGA-BR-8588 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8591       TCGA-BR-8592 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678       TCGA-BR-8679 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683       TCGA-BR-8686 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A44U 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2       TCGA-BR-A4J4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7       TCGA-BR-A4J8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF       TCGA-BR-A4QI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8528       TCGA-CD-8529 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8530       TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8534       TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A487       TCGA-CD-A489       TCGA-CD-A48A       TCGA-CD-A48C 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI       TCGA-CD-A4MJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4300       TCGA-CG-4301       TCGA-CG-4304       TCGA-CG-4305 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4306       TCGA-CG-4436       TCGA-CG-4437       TCGA-CG-4438 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4442       TCGA-CG-4443       TCGA-CG-4444       TCGA-CG-4449 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4455       TCGA-CG-4460       TCGA-CG-4465       TCGA-CG-4466 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4469       TCGA-CG-4474       TCGA-CG-4475       TCGA-CG-4476 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4477       TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5719       TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5723 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6527 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8578 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV       TCGA-D7-A4YX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6EV       TCGA-D7-A6EX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A748 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-EQ-8122       TCGA-EQ-A4SO       TCGA-F1-6177       TCGA-F1-6874 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6875       TCGA-F1-A448       TCGA-F1-A72C       TCGA-FP-7916 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7998       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7133 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HF-A5NB       TCGA-HJ-7597 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8608       TCGA-HU-8610       TCGA-HU-A4GF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GQ       TCGA-HU-A4GT       TCGA-HU-A4GU       TCGA-HU-A4GX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H3       TCGA-HU-A4H4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4HD       TCGA-IC-A6RE       TCGA-IC-A6RF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3I8       TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3YB       TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A4QT       TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A5S3       TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A8O2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RO       TCGA-IN-A6RR       TCGA-IN-A6RS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NR       TCGA-IN-A7NT       TCGA-IN-A7NU       TCGA-IN-AB1V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-AB1X       TCGA-IP-7968       TCGA-JY-A6F8       TCGA-JY-A6FA 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FB       TCGA-JY-A6FD       TCGA-JY-A6FE       TCGA-JY-A6FG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93E       TCGA-JY-A93F       TCGA-KB-A6F5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A93G       TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OJ       TCGA-L5-A4ON       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88W       TCGA-L5-A891 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NQ       TCGA-L5-A8NS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NT       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49X       TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A3       TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-RD-A7BS       TCGA-RD-A7BT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7BW       TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N0       TCGA-RD-A8N1       TCGA-RE-A7BO       TCGA-S8-A6BV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-S8-A6BW       TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-VQ-A8DL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8E2       TCGA-VQ-A8E7 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8P2       TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PM       TCGA-VQ-A8PQ       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-AA64       TCGA-VQ-AA69       TCGA-VQ-AA6A 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6B       TCGA-VQ-AA6F       TCGA-VQ-AA6G       TCGA-VQ-AA6I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6K       TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8Q7       TCGA-VR-AA4D       TCGA-VR-AA7B       TCGA-X8-AAAR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-Z6-A8JD       TCGA-Z6-A8JE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A9VB       TCGA-Z6-AAPN       TCGA-ZA-A8F6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARPC5L MUTATED        0      1      1
  ARPC5L WILD-TYPE    164    246    142
D674V5, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               2              552 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-4187       TCGA-BR-4191 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4201       TCGA-BR-4253       TCGA-BR-4255       TCGA-BR-4256 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4257       TCGA-BR-4267       TCGA-BR-4279       TCGA-BR-4280 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4294       TCGA-BR-4357       TCGA-BR-4361       TCGA-BR-4362 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4363       TCGA-BR-4366       TCGA-BR-4368       TCGA-BR-4369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4370       TCGA-BR-4371       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6801       TCGA-BR-6802       TCGA-BR-6803 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197       TCGA-BR-7703 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715       TCGA-BR-7716 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7722       TCGA-BR-7723       TCGA-BR-7851 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7901       TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8058       TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8081       TCGA-BR-8284       TCGA-BR-8286 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8289       TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8366       TCGA-BR-8367       TCGA-BR-8368       TCGA-BR-8369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8371       TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486       TCGA-BR-8487 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8588       TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8591 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8686       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A44U       TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2       TCGA-BR-A4J4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7       TCGA-BR-A4J8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF       TCGA-BR-A4QI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5803       TCGA-CD-5804 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525       TCGA-CD-8526 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8527       TCGA-CD-8528       TCGA-CD-8529       TCGA-CD-8530 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A489       TCGA-CD-A48A       TCGA-CD-A48C       TCGA-CD-A4MG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A4MH       TCGA-CD-A4MI       TCGA-CD-A4MJ       TCGA-CG-4301 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4304       TCGA-CG-4305       TCGA-CG-4306       TCGA-CG-4436 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4437       TCGA-CG-4438       TCGA-CG-4440       TCGA-CG-4441 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4442       TCGA-CG-4443       TCGA-CG-4444       TCGA-CG-4449 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4460       TCGA-CG-4462       TCGA-CG-4465       TCGA-CG-4466 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4469       TCGA-CG-4474       TCGA-CG-4475       TCGA-CG-4476 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4477       TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5719       TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5722 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5723       TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5732       TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6527       TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6818       TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8572       TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8576       TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YU       TCGA-D7-A4YV       TCGA-D7-A4YX       TCGA-D7-A4YY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4Z0       TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A748       TCGA-D7-A74A       TCGA-EQ-8122       TCGA-EQ-A4SO 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6177       TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-A72C       TCGA-FP-7735       TCGA-FP-7829       TCGA-FP-7916 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7998       TCGA-FP-8099       TCGA-FP-8209       TCGA-FP-8210 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-8211       TCGA-FP-8631       TCGA-FP-A4BE       TCGA-FP-A4BF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-A8CX       TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7133       TCGA-HF-7134       TCGA-HF-7136       TCGA-HF-A5NB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HJ-7597       TCGA-HU-8238       TCGA-HU-8243       TCGA-HU-8244 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8249       TCGA-HU-8602       TCGA-HU-8604       TCGA-HU-8608 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8610       TCGA-HU-A4G2       TCGA-HU-A4G3       TCGA-HU-A4G6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4G8       TCGA-HU-A4G9       TCGA-HU-A4GC       TCGA-HU-A4GD 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GF       TCGA-HU-A4GH       TCGA-HU-A4GJ       TCGA-HU-A4GN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GP       TCGA-HU-A4GQ       TCGA-HU-A4GT       TCGA-HU-A4GU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H0       TCGA-HU-A4H2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H3       TCGA-HU-A4H4       TCGA-HU-A4H5       TCGA-HU-A4H6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H8       TCGA-HU-A4HB       TCGA-HU-A4HD       TCGA-IC-A6RE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL       TCGA-IG-A3Y9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC       TCGA-IG-A4P3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L       TCGA-IG-A51D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625       TCGA-IG-A6QS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H       TCGA-IG-A97I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462       TCGA-IN-8663 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL       TCGA-IN-A6RN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RO       TCGA-IN-A6RR       TCGA-IN-A6RS       TCGA-IN-A7NR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NT       TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IP-7968       TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FD       TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A938       TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A93E       TCGA-JY-A93F       TCGA-KB-A6F7       TCGA-KB-A93G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A93J       TCGA-KH-A6WC       TCGA-L5-A43C       TCGA-L5-A43E 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43H       TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OE       TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OI       TCGA-L5-A4OJ       TCGA-L5-A4OM       TCGA-L5-A4ON 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ       TCGA-L5-A4OR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU       TCGA-L5-A4OW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T       TCGA-L5-A88V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z       TCGA-L5-A891 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ       TCGA-L5-A8NK 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W       TCGA-LN-A49X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-MX-A5UJ       TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Q9-A6FW       TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7ZI       TCGA-R5-A7ZR       TCGA-R5-A805       TCGA-R6-A6DN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6DQ       TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6XG       TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A8W5       TCGA-R6-A8W8       TCGA-R6-A8WC       TCGA-R6-A8WG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7BS       TCGA-RD-A7BT       TCGA-RD-A7BW       TCGA-RD-A7C1 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0       TCGA-RD-A8N1 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N2       TCGA-RD-A8N4       TCGA-RD-A8N5       TCGA-RD-A8N6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N9       TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-V5-A7RE       TCGA-V5-AASV       TCGA-V5-AASW       TCGA-V5-AASX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8DV       TCGA-VQ-A8DZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2       TCGA-VQ-A8P3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM       TCGA-VQ-A8PQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V       TCGA-VQ-A92D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68       TCGA-VQ-AA69 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F       TCGA-VQ-AA6G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K       TCGA-VR-A8EO 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER       TCGA-VR-A8ET 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX       TCGA-VR-A8EY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D       TCGA-VR-AA4G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I       TCGA-X8-AAAR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-XP-A8T6       TCGA-XP-A8T8       TCGA-Z6-A8JD       TCGA-Z6-A8JE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A9VB       TCGA-Z6-AAPN       TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARPC5L MUTATED        0      1      1      0      0
  ARPC5L WILD-TYPE    121    103     90    121    117
D674V6, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               2              552 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-4187       TCGA-BR-4191 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4201       TCGA-BR-4253       TCGA-BR-4255       TCGA-BR-4256 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4257       TCGA-BR-4267       TCGA-BR-4279       TCGA-BR-4280 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4294       TCGA-BR-4357       TCGA-BR-4361       TCGA-BR-4362 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4363       TCGA-BR-4366       TCGA-BR-4368       TCGA-BR-4369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-4370       TCGA-BR-4371       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6801       TCGA-BR-6802       TCGA-BR-6803 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197       TCGA-BR-7703 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715       TCGA-BR-7716 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7722       TCGA-BR-7723       TCGA-BR-7851 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7901       TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8058       TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8081       TCGA-BR-8284       TCGA-BR-8286 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8289       TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8366       TCGA-BR-8367       TCGA-BR-8368       TCGA-BR-8369 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8371       TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486       TCGA-BR-8487 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8588       TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8591 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8686       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A44U       TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2       TCGA-BR-A4J4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7       TCGA-BR-A4J8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF       TCGA-BR-A4QI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5803       TCGA-CD-5804 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525       TCGA-CD-8526 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8527       TCGA-CD-8528       TCGA-CD-8529       TCGA-CD-8530 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A489       TCGA-CD-A48A       TCGA-CD-A48C       TCGA-CD-A4MG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A4MH       TCGA-CD-A4MI       TCGA-CD-A4MJ       TCGA-CG-4301 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4304       TCGA-CG-4305       TCGA-CG-4306       TCGA-CG-4436 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4437       TCGA-CG-4438       TCGA-CG-4440       TCGA-CG-4441 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4442       TCGA-CG-4443       TCGA-CG-4444       TCGA-CG-4449 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4460       TCGA-CG-4462       TCGA-CG-4465       TCGA-CG-4466 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4469       TCGA-CG-4474       TCGA-CG-4475       TCGA-CG-4476 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4477       TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5719       TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5722 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5723       TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5732       TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6527       TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6818       TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8572       TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8576       TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YU       TCGA-D7-A4YV       TCGA-D7-A4YX       TCGA-D7-A4YY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4Z0       TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A748       TCGA-D7-A74A       TCGA-EQ-8122       TCGA-EQ-A4SO 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6177       TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-A72C       TCGA-FP-7735       TCGA-FP-7829       TCGA-FP-7916 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7998       TCGA-FP-8099       TCGA-FP-8209       TCGA-FP-8210 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-8211       TCGA-FP-8631       TCGA-FP-A4BE       TCGA-FP-A4BF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-A8CX       TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7133       TCGA-HF-7134       TCGA-HF-7136       TCGA-HF-A5NB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HJ-7597       TCGA-HU-8238       TCGA-HU-8243       TCGA-HU-8244 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8249       TCGA-HU-8602       TCGA-HU-8604       TCGA-HU-8608 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8610       TCGA-HU-A4G2       TCGA-HU-A4G3       TCGA-HU-A4G6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4G8       TCGA-HU-A4G9       TCGA-HU-A4GC       TCGA-HU-A4GD 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GF       TCGA-HU-A4GH       TCGA-HU-A4GJ       TCGA-HU-A4GN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GP       TCGA-HU-A4GQ       TCGA-HU-A4GT       TCGA-HU-A4GU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H0       TCGA-HU-A4H2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H3       TCGA-HU-A4H4       TCGA-HU-A4H5       TCGA-HU-A4H6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H8       TCGA-HU-A4HB       TCGA-HU-A4HD       TCGA-IC-A6RE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL       TCGA-IG-A3Y9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC       TCGA-IG-A4P3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L       TCGA-IG-A51D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625       TCGA-IG-A6QS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H       TCGA-IG-A97I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462       TCGA-IN-8663 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL       TCGA-IN-A6RN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RO       TCGA-IN-A6RR       TCGA-IN-A6RS       TCGA-IN-A7NR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NT       TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IP-7968       TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FD       TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A938       TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A93E       TCGA-JY-A93F       TCGA-KB-A6F7       TCGA-KB-A93G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A93J       TCGA-KH-A6WC       TCGA-L5-A43C       TCGA-L5-A43E 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43H       TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OE       TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OI       TCGA-L5-A4OJ       TCGA-L5-A4OM       TCGA-L5-A4ON 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ       TCGA-L5-A4OR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU       TCGA-L5-A4OW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T       TCGA-L5-A88V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z       TCGA-L5-A891 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ       TCGA-L5-A8NK 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W       TCGA-LN-A49X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-MX-A5UJ       TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Q9-A6FW       TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7ZI       TCGA-R5-A7ZR       TCGA-R5-A805       TCGA-R6-A6DN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6DQ       TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6XG       TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A8W5       TCGA-R6-A8W8       TCGA-R6-A8WC       TCGA-R6-A8WG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7BS       TCGA-RD-A7BT       TCGA-RD-A7BW       TCGA-RD-A7C1 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0       TCGA-RD-A8N1 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N2       TCGA-RD-A8N4       TCGA-RD-A8N5       TCGA-RD-A8N6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N9       TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-V5-A7RE       TCGA-V5-AASV       TCGA-V5-AASW       TCGA-V5-AASX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8DV       TCGA-VQ-A8DZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2       TCGA-VQ-A8P3 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM       TCGA-VQ-A8PQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V       TCGA-VQ-A92D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68       TCGA-VQ-AA69 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F       TCGA-VQ-AA6G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K       TCGA-VR-A8EO 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER       TCGA-VR-A8ET 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX       TCGA-VR-A8EY 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D       TCGA-VR-AA4G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I       TCGA-X8-AAAR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-XP-A8T6       TCGA-XP-A8T8       TCGA-Z6-A8JD       TCGA-Z6-A8JE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A9VB       TCGA-Z6-AAPN       TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARPC5L MUTATED        0      3      0
  ARPC5L WILD-TYPE    159    248    165
D674V7, multiclass
        clus
vv       ARPC5L MUTATED ARPC5L WILD-TYPE
  CLUS_1              0              159
  CLUS_2              3              248
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARPC5L MUTATED        0      1      2      0      0
  ARPC5L WILD-TYPE    118    130    149     94     81
D674V8, multiclass
        clus
vv       ARPC5L MUTATED ARPC5L WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARPC5L MUTATED        0      1      0      0      1
  ARPC5L WILD-TYPE    118    135    115     40     70
D674V9, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8080 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289       TCGA-BR-8291 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360       TCGA-BR-8361 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365       TCGA-BR-8368 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371       TCGA-BR-8372 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381       TCGA-BR-8382 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485       TCGA-BR-8486 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8487       TCGA-BR-8588       TCGA-BR-8590       TCGA-BR-8591 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A452 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR       TCGA-BR-A4CS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY       TCGA-BR-A4IZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI       TCGA-BR-A4QL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799       TCGA-CD-5800 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803       TCGA-CD-5804 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525       TCGA-CD-8526 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530       TCGA-CD-8531 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534       TCGA-CD-8535 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487       TCGA-CD-A489 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449       TCGA-CG-5716 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719       TCGA-CG-5720 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723       TCGA-CG-5724 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727       TCGA-CG-5728 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733       TCGA-CG-5734 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579       TCGA-D7-6518 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521       TCGA-D7-6522 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526       TCGA-D7-6527 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576       TCGA-D7-8578 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET       TCGA-D7-A6EV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748       TCGA-D7-A74A 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122       TCGA-F1-6177 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448       TCGA-FP-7735 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099       TCGA-FP-8209 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631       TCGA-FP-A4BE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7134 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243       TCGA-HU-8602 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3       TCGA-HU-A4G8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF       TCGA-HU-A4GH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ       TCGA-HU-A4GT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI       TCGA-L5-A4OM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4ON       TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A88V       TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A891       TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NG       TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NQ       TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NU       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7ZR       TCGA-R5-A805       TCGA-R6-A6DN       TCGA-R6-A6DQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6       TCGA-R6-A6XG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2       TCGA-R6-A8W5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS       TCGA-RD-A7BW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6       TCGA-RD-A8N9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW       TCGA-SW-A7EA 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC       TCGA-V5-A7RE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL       TCGA-VQ-A8DU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARPC5L MUTATED        0      0      2      0      0
  ARPC5L WILD-TYPE     48    109    128    101     92
D674V10, multiclass
[1] "Remove cluster labels:" "ARPC5L MUTATED"        
clus
  ARPC5L MUTATED ARPC5L WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8080 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289       TCGA-BR-8291 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360       TCGA-BR-8361 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365       TCGA-BR-8368 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371       TCGA-BR-8372 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381       TCGA-BR-8382 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485       TCGA-BR-8486 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8487       TCGA-BR-8588       TCGA-BR-8590       TCGA-BR-8591 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A452 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR       TCGA-BR-A4CS 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY       TCGA-BR-A4IZ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI       TCGA-BR-A4QL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799       TCGA-CD-5800 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803       TCGA-CD-5804 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525       TCGA-CD-8526 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530       TCGA-CD-8531 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534       TCGA-CD-8535 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487       TCGA-CD-A489 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449       TCGA-CG-5716 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719       TCGA-CG-5720 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723       TCGA-CG-5724 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727       TCGA-CG-5728 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733       TCGA-CG-5734 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579       TCGA-D7-6518 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521       TCGA-D7-6522 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526       TCGA-D7-6527 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576       TCGA-D7-8578 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET       TCGA-D7-A6EV 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748       TCGA-D7-A74A 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122       TCGA-F1-6177 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448       TCGA-FP-7735 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099       TCGA-FP-8209 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631       TCGA-FP-A4BE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7134 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243       TCGA-HU-8602 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3       TCGA-HU-A4G8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF       TCGA-HU-A4GH 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ       TCGA-HU-A4GT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI       TCGA-L5-A4OM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4ON       TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A88V       TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A891       TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NG       TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NQ       TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L5-A8NU       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R5-A7ZR       TCGA-R5-A805       TCGA-R6-A6DN       TCGA-R6-A6DQ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6       TCGA-R6-A6XG 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2       TCGA-R6-A8W5 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS       TCGA-RD-A7BW 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6       TCGA-RD-A8N9 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW       TCGA-SW-A7EA 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC       TCGA-V5-A7RE 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL       TCGA-VQ-A8DU 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"ARPC5L WILD-TYPE" "ARPC5L WILD-TYPE" 

Clustering(675) Variable = UPK2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UPK2 MUTATED        1      0      1      3
  UPK2 WILD-TYPE    134     92    171    173
D675V1, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UPK2 MUTATED        2      1      1
  UPK2 WILD-TYPE    213    154    161
D675V2, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            2            213
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UPK2 MUTATED        2      2      0      0
  UPK2 WILD-TYPE    133    122    125     60
D675V3, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UPK2 MUTATED        3      1      0
  UPK2 WILD-TYPE    250    101     89
D675V4, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UPK2 MUTATED        1      2      1
  UPK2 WILD-TYPE    163    245    142
D675V5, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UPK2 MUTATED        1      0      3      0      0
  UPK2 WILD-TYPE    120    104     88    121    117
D675V6, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UPK2 MUTATED        1      4      0
  UPK2 WILD-TYPE    158    247    165
D675V7, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UPK2 MUTATED        1      3      1      0      0
  UPK2 WILD-TYPE    117    128    150     94     81
D675V8, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UPK2 MUTATED        1      0      0      1      1
  UPK2 WILD-TYPE    117    136    115     39     70
D675V9, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            0            136
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UPK2 MUTATED        1      2      0      0      0
  UPK2 WILD-TYPE     47    107    130    101     92
D675V10, multiclass
        clus
vv       UPK2 MUTATED UPK2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            0            130
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(676) Variable = NEUROD6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEUROD6 MUTATED        1      1      0      5
  NEUROD6 WILD-TYPE    134     91    172    171
D676V1, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NEUROD6 MUTATED        2      1      1
  NEUROD6 WILD-TYPE    213    154    161
D676V2, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NEUROD6 MUTATED        2      3      1      0
  NEUROD6 WILD-TYPE    133    121    124     60
D676V3, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NEUROD6 MUTATED        4      1      1
  NEUROD6 WILD-TYPE    249    101     88
D676V4, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NEUROD6 MUTATED        1      4      1
  NEUROD6 WILD-TYPE    163    243    142
D676V5, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEUROD6 MUTATED        0      2      2      1      1
  NEUROD6 WILD-TYPE    121    102     89    120    116
D676V6, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  NEUROD6 MUTATED        0      5      2
  NEUROD6 WILD-TYPE    159    246    163
D676V7, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               5               246
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEUROD6 MUTATED        2      1      2      1      1
  NEUROD6 WILD-TYPE    116    130    149     93     80
D676V8, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               130
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEUROD6 MUTATED        0      1      2      0      1
  NEUROD6 WILD-TYPE    118    135    113     40     70
D676V9, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NEUROD6 MUTATED        0      1      1      1      1
  NEUROD6 WILD-TYPE     48    108    129    100     91
D676V10, multiclass
        clus
vv       NEUROD6 MUTATED NEUROD6 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(677) Variable = KIF20B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF20B MUTATED        3      1      5     13
  KIF20B WILD-TYPE    132     91    167    163
D677V1, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              5              167
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF20B MUTATED       10      6      3
  KIF20B WILD-TYPE    205    149    159
D677V2, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1             10              205
  CLUS_2              6              149
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF20B MUTATED        8      8      1      2
  KIF20B WILD-TYPE    127    116    124     58
D677V3, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              8              127
  CLUS_2              8              116
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF20B MUTATED       15      4      0
  KIF20B WILD-TYPE    238     98     89
D677V4, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1             15              238
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF20B MUTATED        7     10      4
  KIF20B WILD-TYPE    157    237    139
D677V5, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              7              157
  CLUS_2             10              237
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF20B MUTATED        3      3      7      7      1
  KIF20B WILD-TYPE    118    101     84    114    116
D677V6, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              3              118
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              7              114
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIF20B MUTATED        5     15      2
  KIF20B WILD-TYPE    154    236    163
D677V7, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              5              154
  CLUS_2             15              236
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF20B MUTATED        1     10      4      6      1
  KIF20B WILD-TYPE    117    121    147     88     80
D677V8, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              1              117
  CLUS_2             10              121
  CLUS_3              4              147
  CLUS_4              6               88
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF20B MUTATED        5      8      1      1      3
  KIF20B WILD-TYPE    113    128    114     39     68
D677V9, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              5              113
  CLUS_2              8              128
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF20B MUTATED        2      4      5      1      6
  KIF20B WILD-TYPE     46    105    125    100     86
D677V10, multiclass
        clus
vv       KIF20B MUTATED KIF20B WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(678) Variable = NPHS1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NPHS1 MUTATED        3      4      4      9
  NPHS1 WILD-TYPE    132     88    168    167
D678V1, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             4             168
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHS1 MUTATED       10      3      7
  NPHS1 WILD-TYPE    205    152    155
D678V2, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             3             152
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NPHS1 MUTATED        5      3      5      1
  NPHS1 WILD-TYPE    130    121    120     59
D678V3, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             5             120
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHS1 MUTATED        9      2      3
  NPHS1 WILD-TYPE    244    100     86
D678V4, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHS1 MUTATED        3     12      6
  NPHS1 WILD-TYPE    161    235    137
D678V5, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            12             235
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHS1 MUTATED        1      5      5      3      7
  NPHS1 WILD-TYPE    120     99     86    118    110
D678V6, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             5              86
  CLUS_4             3             118
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NPHS1 MUTATED        4      8      9
  NPHS1 WILD-TYPE    155    243    156
D678V7, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             8             243
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHS1 MUTATED        2      8      4      2      5
  NPHS1 WILD-TYPE    116    123    147     92     76
D678V8, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             123
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHS1 MUTATED        3      6      8      0      1
  NPHS1 WILD-TYPE    115    130    107     40     70
D678V9, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             8             107
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPHS1 MUTATED        1      6      5      4      2
  NPHS1 WILD-TYPE     47    103    125     97     90
D678V10, multiclass
        clus
vv       NPHS1 MUTATED NPHS1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             4              97
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(679) Variable = NUFIP2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUFIP2 MUTATED        3      0      1      4
  NUFIP2 WILD-TYPE    132     92    171    172
D679V1, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP2 MUTATED        5      0      1
  NUFIP2 WILD-TYPE    210    155    161
D679V2, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUFIP2 MUTATED        6      1      0      1
  NUFIP2 WILD-TYPE    129    123    125     59
D679V3, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP2 MUTATED        6      1      1
  NUFIP2 WILD-TYPE    247    101     88
D679V4, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP2 MUTATED        0      5      3
  NUFIP2 WILD-TYPE    164    242    140
D679V5, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              5              242
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP2 MUTATED        0      1      4      0      3
  NUFIP2 WILD-TYPE    121    103     87    121    114
D679V6, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP2 MUTATED        2      5      1
  NUFIP2 WILD-TYPE    157    246    164
D679V7, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP2 MUTATED        1      3      3      0      1
  NUFIP2 WILD-TYPE    117    128    148     94     80
D679V8, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP2 MUTATED        0      2      1      0      3
  NUFIP2 WILD-TYPE    118    134    114     40     68
D679V9, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP2 MUTATED        0      0      5      1      0
  NUFIP2 WILD-TYPE     48    109    125    100     92
D679V10, multiclass
        clus
vv       NUFIP2 MUTATED NUFIP2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              0              109
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(680) Variable = MED23 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED23 MUTATED        3      5      1     14
  MED23 WILD-TYPE    132     87    171    162
D680V1, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5              87
  CLUS_3             1             171
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED23 MUTATED       11      2      5
  MED23 WILD-TYPE    204    153    157
D680V2, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             2             153
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MED23 MUTATED        6     10      2      3
  MED23 WILD-TYPE    129    114    123     57
D680V3, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            10             114
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED23 MUTATED       11      6      4
  MED23 WILD-TYPE    242     96     85
D680V4, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             6              96
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED23 MUTATED        6     11      4
  MED23 WILD-TYPE    158    236    139
D680V5, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED23 MUTATED        3      7      5      2      4
  MED23 WILD-TYPE    118     97     86    119    113
D680V6, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             7              97
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MED23 MUTATED        3     15      5
  MED23 WILD-TYPE    156    236    160
D680V7, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            15             236
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED23 MUTATED        4      6     11      1      1
  MED23 WILD-TYPE    114    125    140     93     80
D680V8, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             6             125
  CLUS_3            11             140
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED23 MUTATED        2      5      3      2      6
  MED23 WILD-TYPE    116    131    112     38     65
D680V9, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MED23 MUTATED        3      5      9      0      1
  MED23 WILD-TYPE     45    104    121    101     91
D680V10, multiclass
        clus
vv       MED23 MUTATED MED23 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             5             104
  CLUS_3             9             121
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(681) Variable = FBXO34 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO34 MUTATED        0      2      2      9
  FBXO34 WILD-TYPE    135     90    170    167
D681V1, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              2              170
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO34 MUTATED        7      4      2
  FBXO34 WILD-TYPE    208    151    160
D681V2, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              4              151
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO34 MUTATED        4      2      1      1
  FBXO34 WILD-TYPE    131    122    124     59
D681V3, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO34 MUTATED        5      2      1
  FBXO34 WILD-TYPE    248    100     88
D681V4, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO34 MUTATED        6      5      2
  FBXO34 WILD-TYPE    158    242    141
D681V5, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              5              242
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO34 MUTATED        2      0      5      4      2
  FBXO34 WILD-TYPE    119    104     86    117    115
D681V6, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              0              104
  CLUS_3              5               86
  CLUS_4              4              117
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO34 MUTATED        4      7      2
  FBXO34 WILD-TYPE    155    244    163
D681V7, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              4              155
  CLUS_2              7              244
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO34 MUTATED        1      3      6      3      0
  FBXO34 WILD-TYPE    117    128    145     91     81
D681V8, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              6              145
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO34 MUTATED        4      2      0      0      7
  FBXO34 WILD-TYPE    114    134    115     40     64
D681V9, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO34 MUTATED        1      4      5      0      3
  FBXO34 WILD-TYPE     47    105    125    101     89
D681V10, multiclass
        clus
vv       FBXO34 MUTATED FBXO34 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(682) Variable = SH2B1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH2B1 MUTATED        1      1      1      9
  SH2B1 WILD-TYPE    134     91    171    167
D682V1, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SH2B1 MUTATED        8      1      2
  SH2B1 WILD-TYPE    207    154    160
D682V2, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH2B1 MUTATED        5      4      1      0
  SH2B1 WILD-TYPE    130    120    124     60
D682V3, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SH2B1 MUTATED        6      3      1
  SH2B1 WILD-TYPE    247     99     88
D682V4, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SH2B1 MUTATED        3      7      2
  SH2B1 WILD-TYPE    161    240    141
D682V5, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH2B1 MUTATED        0      3      6      1      2
  SH2B1 WILD-TYPE    121    101     85    120    115
D682V6, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SH2B1 MUTATED        2     10      1
  SH2B1 WILD-TYPE    157    241    164
D682V7, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH2B1 MUTATED        1      8      3      1      0
  SH2B1 WILD-TYPE    117    123    148     93     81
D682V8, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH2B1 MUTATED        1      5      0      1      3
  SH2B1 WILD-TYPE    117    131    115     39     68
D682V9, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH2B1 MUTATED        0      4      5      0      1
  SH2B1 WILD-TYPE     48    105    125    101     91
D682V10, multiclass
        clus
vv       SH2B1 MUTATED SH2B1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(683) Variable = P2RX1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  P2RX1 MUTATED        0      0      1      4
  P2RX1 WILD-TYPE    135     92    171    172
D683V1, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RX1 MUTATED        4      0      1
  P2RX1 WILD-TYPE    211    155    161
D683V2, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  P2RX1 MUTATED        0      3      0      0
  P2RX1 WILD-TYPE    135    121    125     60
D683V3, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RX1 MUTATED        2      1      0
  P2RX1 WILD-TYPE    251    101     89
D683V4, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RX1 MUTATED        1      2      1
  P2RX1 WILD-TYPE    163    245    142
D683V5, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             2             245
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RX1 MUTATED        0      2      1      0      1
  P2RX1 WILD-TYPE    121    102     90    121    116
D683V6, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             1              90
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  P2RX1 MUTATED        1      3      1
  P2RX1 WILD-TYPE    158    248    164
D683V7, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             3             248
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RX1 MUTATED        0      3      1      0      1
  P2RX1 WILD-TYPE    118    128    150     94     80
D683V8, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RX1 MUTATED        0      3      0      0      2
  P2RX1 WILD-TYPE    118    133    115     40     69
D683V9, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  P2RX1 MUTATED        0      3      1      1      0
  P2RX1 WILD-TYPE     48    106    129    100     92
D683V10, multiclass
        clus
vv       P2RX1 MUTATED P2RX1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(684) Variable = SAP30BP MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SAP30BP MUTATED        0      1      2      4
  SAP30BP WILD-TYPE    135     91    170    172
D684V1, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SAP30BP MUTATED        4      2      1
  SAP30BP WILD-TYPE    211    153    161
D684V2, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SAP30BP MUTATED        2      2      1      0
  SAP30BP WILD-TYPE    133    122    124     60
D684V3, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SAP30BP MUTATED        4      0      1
  SAP30BP WILD-TYPE    249    102     88
D684V4, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               4               249
  CLUS_2               0               102
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SAP30BP MUTATED        1      4      1
  SAP30BP WILD-TYPE    163    243    142
D684V5, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAP30BP MUTATED        0      2      2      1      1
  SAP30BP WILD-TYPE    121    102     89    120    116
D684V6, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SAP30BP MUTATED        2      3      2
  SAP30BP WILD-TYPE    157    248    163
D684V7, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               2               157
  CLUS_2               3               248
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAP30BP MUTATED        2      2      0      1      2
  SAP30BP WILD-TYPE    116    129    151     93     79
D684V8, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               129
  CLUS_3               0               151
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAP30BP MUTATED        2      2      1      0      1
  SAP30BP WILD-TYPE    116    134    114     40     70
D684V9, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAP30BP MUTATED        0      3      0      2      1
  SAP30BP WILD-TYPE     48    106    130     99     91
D684V10, multiclass
        clus
vv       SAP30BP MUTATED SAP30BP WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               0               130
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(685) Variable = NCEH1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCEH1 MUTATED        1      0      2      4
  NCEH1 WILD-TYPE    134     92    170    172
D685V1, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCEH1 MUTATED        5      2      1
  NCEH1 WILD-TYPE    210    153    161
D685V2, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NCEH1 MUTATED        3      3      0      0
  NCEH1 WILD-TYPE    132    121    125     60
D685V3, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCEH1 MUTATED        4      2      0
  NCEH1 WILD-TYPE    249    100     89
D685V4, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCEH1 MUTATED        2      5      1
  NCEH1 WILD-TYPE    162    242    142
D685V5, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCEH1 MUTATED        2      0      4      1      1
  NCEH1 WILD-TYPE    119    104     87    120    116
D685V6, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NCEH1 MUTATED        2      5      1
  NCEH1 WILD-TYPE    157    246    164
D685V7, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCEH1 MUTATED        1      4      1      1      1
  NCEH1 WILD-TYPE    117    127    150     93     80
D685V8, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             1             150
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCEH1 MUTATED        2      3      1      0      0
  NCEH1 WILD-TYPE    116    133    114     40     71
D685V9, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NCEH1 MUTATED        1      3      0      1      1
  NCEH1 WILD-TYPE     47    106    130    100     91
D685V10, multiclass
        clus
vv       NCEH1 MUTATED NCEH1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(686) Variable = ANTXR1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANTXR1 MUTATED        1      1      3      7
  ANTXR1 WILD-TYPE    134     91    169    169
D686V1, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANTXR1 MUTATED        8      1      2
  ANTXR1 WILD-TYPE    207    154    160
D686V2, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANTXR1 MUTATED        3      3      2      1
  ANTXR1 WILD-TYPE    132    121    123     59
D686V3, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANTXR1 MUTATED        4      3      2
  ANTXR1 WILD-TYPE    249     99     87
D686V4, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANTXR1 MUTATED        2      7      3
  ANTXR1 WILD-TYPE    162    240    140
D686V5, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANTXR1 MUTATED        3      4      3      0      2
  ANTXR1 WILD-TYPE    118    100     88    121    115
D686V6, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              4              100
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ANTXR1 MUTATED        1      8      3
  ANTXR1 WILD-TYPE    158    243    162
D686V7, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANTXR1 MUTATED        3      3      4      0      2
  ANTXR1 WILD-TYPE    115    128    147     94     79
D686V8, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              128
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANTXR1 MUTATED        1      3      3      1      2
  ANTXR1 WILD-TYPE    117    133    112     39     69
D686V9, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANTXR1 MUTATED        2      2      4      2      0
  ANTXR1 WILD-TYPE     46    107    126     99     92
D686V10, multiclass
        clus
vv       ANTXR1 MUTATED ANTXR1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              2              107
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(687) Variable = BLMH MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BLMH MUTATED        2      0      1      2
  BLMH WILD-TYPE    133     92    171    174
D687V1, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            2            174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BLMH MUTATED        4      1      0
  BLMH WILD-TYPE    211    154    162
D687V2, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BLMH MUTATED        1      3      0      0
  BLMH WILD-TYPE    134    121    125     60
D687V3, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BLMH MUTATED        2      2      0
  BLMH WILD-TYPE    251    100     89
D687V4, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            2            251
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BLMH MUTATED        0      4      1
  BLMH WILD-TYPE    164    243    142
D687V5, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            0            164
  CLUS_2            4            243
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BLMH MUTATED        1      2      2      0      0
  BLMH WILD-TYPE    120    102     89    121    117
D687V6, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BLMH MUTATED        0      4      1
  BLMH WILD-TYPE    159    247    164
D687V7, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            0            159
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BLMH MUTATED        1      4      0      0      0
  BLMH WILD-TYPE    117    127    151     94     81
D687V8, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            0            151
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BLMH MUTATED        0      3      1      1      0
  BLMH WILD-TYPE    118    133    114     39     71
D687V9, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BLMH MUTATED        1      4      0      0      0
  BLMH WILD-TYPE     47    105    130    101     92
D687V10, multiclass
        clus
vv       BLMH MUTATED BLMH WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            0            130
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(688) Variable = ZNF207 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF207 MUTATED        1      0      2      7
  ZNF207 WILD-TYPE    134     92    170    169
D688V1, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF207 MUTATED        8      0      2
  ZNF207 WILD-TYPE    207    155    160
D688V2, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF207 MUTATED        5      2      2      0
  ZNF207 WILD-TYPE    130    122    123     60
D688V3, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              2              122
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF207 MUTATED        6      1      2
  ZNF207 WILD-TYPE    247    101     87
D688V4, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF207 MUTATED        2      5      3
  ZNF207 WILD-TYPE    162    242    140
D688V5, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF207 MUTATED        2      1      6      0      1
  ZNF207 WILD-TYPE    119    103     85    121    116
D688V6, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              1              103
  CLUS_3              6               85
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF207 MUTATED        1      7      2
  ZNF207 WILD-TYPE    158    244    163
D688V7, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              7              244
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF207 MUTATED        2      4      3      0      1
  ZNF207 WILD-TYPE    116    127    148     94     80
D688V8, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF207 MUTATED        1      2      1      2      2
  ZNF207 WILD-TYPE    117    134    114     38     69
D688V9, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF207 MUTATED        2      1      4      1      0
  ZNF207 WILD-TYPE     46    108    126    100     92
D688V10, multiclass
        clus
vv       ZNF207 MUTATED ZNF207 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(689) Variable = SIGLEC10 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SIGLEC10 MUTATED        3      1      3      9
  SIGLEC10 WILD-TYPE    132     91    169    167
D689V1, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4                9                167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SIGLEC10 MUTATED        8      5      2
  SIGLEC10 WILD-TYPE    207    150    160
D689V2, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                8                207
  CLUS_2                5                150
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SIGLEC10 MUTATED        5      2      4      2
  SIGLEC10 WILD-TYPE    130    122    121     58
D689V3, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                5                130
  CLUS_2                2                122
  CLUS_3                4                121
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SIGLEC10 MUTATED        8      1      4
  SIGLEC10 WILD-TYPE    245    101     85
D689V4, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                8                245
  CLUS_2                1                101
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SIGLEC10 MUTATED        5      5      6
  SIGLEC10 WILD-TYPE    159    242    137
D689V5, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                5                159
  CLUS_2                5                242
  CLUS_3                6                137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC10 MUTATED        2      3      4      4      3
  SIGLEC10 WILD-TYPE    119    101     87    117    114
D689V6, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                3                101
  CLUS_3                4                 87
  CLUS_4                4                117
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SIGLEC10 MUTATED        2      8      6
  SIGLEC10 WILD-TYPE    157    243    159
D689V7, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                8                243
  CLUS_3                6                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC10 MUTATED        1      5      4      3      3
  SIGLEC10 WILD-TYPE    117    126    147     91     78
D689V8, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                126
  CLUS_3                4                147
  CLUS_4                3                 91
  CLUS_5                3                 78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC10 MUTATED        1      3      4      3      2
  SIGLEC10 WILD-TYPE    117    133    111     37     69
D689V9, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                3                133
  CLUS_3                4                111
  CLUS_4                3                 37
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC10 MUTATED        1      3      4      2      3
  SIGLEC10 WILD-TYPE     47    106    126     99     89
D689V10, multiclass
        clus
vv       SIGLEC10 MUTATED SIGLEC10 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                3                106
  CLUS_3                4                126
  CLUS_4                2                 99
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(690) Variable = FAHD2A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAHD2A MUTATED        0      1      0      8
  FAHD2A WILD-TYPE    135     91    172    168
D690V1, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2A MUTATED        5      0      1
  FAHD2A WILD-TYPE    210    155    161
D690V2, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAHD2A MUTATED        3      3      0      1
  FAHD2A WILD-TYPE    132    121    125     59
D690V3, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2A MUTATED        6      0      1
  FAHD2A WILD-TYPE    247    102     88
D690V4, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              6              247
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2A MUTATED        0      5      3
  FAHD2A WILD-TYPE    164    242    140
D690V5, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              0              164
  CLUS_2              5              242
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2A MUTATED        1      1      4      0      2
  FAHD2A WILD-TYPE    120    103     87    121    115
D690V6, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAHD2A MUTATED        1      7      1
  FAHD2A WILD-TYPE    158    244    164
D690V7, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              1              158
  CLUS_2              7              244
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2A MUTATED        1      4      3      0      1
  FAHD2A WILD-TYPE    117    127    148     94     80
D690V8, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2A MUTATED        0      4      1      0      1
  FAHD2A WILD-TYPE    118    132    114     40     70
D690V9, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAHD2A MUTATED        0      4      1      1      0
  FAHD2A WILD-TYPE     48    105    129    100     92
D690V10, multiclass
        clus
vv       FAHD2A MUTATED FAHD2A WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              1              129
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(691) Variable = NUFIP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUFIP1 MUTATED        3      1      4      5
  NUFIP1 WILD-TYPE    132     91    168    171
D691V1, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP1 MUTATED        8      3      1
  NUFIP1 WILD-TYPE    207    152    161
D691V2, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              3              152
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUFIP1 MUTATED        6      4      1      1
  NUFIP1 WILD-TYPE    129    120    124     59
D691V3, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP1 MUTATED        9      2      1
  NUFIP1 WILD-TYPE    244    100     88
D691V4, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP1 MUTATED        3      8      2
  NUFIP1 WILD-TYPE    161    239    141
D691V5, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              8              239
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP1 MUTATED        0      2      4      5      2
  NUFIP1 WILD-TYPE    121    102     87    116    115
D691V6, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              5              116
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NUFIP1 MUTATED        3      7      3
  NUFIP1 WILD-TYPE    156    244    162
D691V7, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              7              244
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP1 MUTATED        0      5      3      3      2
  NUFIP1 WILD-TYPE    118    126    148     91     79
D691V8, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              3              148
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP1 MUTATED        3      3      1      2      3
  NUFIP1 WILD-TYPE    115    133    114     38     68
D691V9, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUFIP1 MUTATED        0      5      2      2      3
  NUFIP1 WILD-TYPE     48    104    128     99     89
D691V10, multiclass
        clus
vv       NUFIP1 MUTATED NUFIP1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              2              128
  CLUS_4              2               99
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(692) Variable = PYHIN1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYHIN1 MUTATED        5      1      3      5
  PYHIN1 WILD-TYPE    130     91    169    171
D692V1, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PYHIN1 MUTATED        9      2      2
  PYHIN1 WILD-TYPE    206    153    160
D692V2, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PYHIN1 MUTATED        7      2      2      2
  PYHIN1 WILD-TYPE    128    122    123     58
D692V3, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              2              122
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PYHIN1 MUTATED        9      2      2
  PYHIN1 WILD-TYPE    244    100     87
D692V4, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PYHIN1 MUTATED        1     10      3
  PYHIN1 WILD-TYPE    163    237    140
D692V5, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2             10              237
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PYHIN1 MUTATED        1      7      3      1      2
  PYHIN1 WILD-TYPE    120     97     88    120    115
D692V6, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              7               97
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PYHIN1 MUTATED        2      8      4
  PYHIN1 WILD-TYPE    157    243    161
D692V7, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PYHIN1 MUTATED        4      5      4      0      1
  PYHIN1 WILD-TYPE    114    126    147     94     80
D692V8, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PYHIN1 MUTATED        1      6      3      0      2
  PYHIN1 WILD-TYPE    117    130    112     40     69
D692V9, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PYHIN1 MUTATED        0      4      5      3      0
  PYHIN1 WILD-TYPE     48    105    125     98     92
D692V10, multiclass
        clus
vv       PYHIN1 MUTATED PYHIN1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              3               98
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(693) Variable = KIAA1462 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1462 MUTATED        7      1      2     16
  KIAA1462 WILD-TYPE    128     91    170    160
D693V1, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4               16                160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1462 MUTATED       14      5      3
  KIAA1462 WILD-TYPE    201    150    159
D693V2, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1               14                201
  CLUS_2                5                150
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1462 MUTATED        8     12      1      2
  KIAA1462 WILD-TYPE    127    112    124     58
D693V3, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                8                127
  CLUS_2               12                112
  CLUS_3                1                124
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1462 MUTATED       14      8      1
  KIAA1462 WILD-TYPE    239     94     88
D693V4, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1               14                239
  CLUS_2                8                 94
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1462 MUTATED        4     16      4
  KIAA1462 WILD-TYPE    160    231    139
D693V5, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               16                231
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1462 MUTATED        4      4     13      1      2
  KIAA1462 WILD-TYPE    117    100     78    120    115
D693V6, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                4                117
  CLUS_2                4                100
  CLUS_3               13                 78
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1462 MUTATED        5     17      4
  KIAA1462 WILD-TYPE    154    234    161
D693V7, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                5                154
  CLUS_2               17                234
  CLUS_3                4                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1462 MUTATED        4     10     10      1      1
  KIAA1462 WILD-TYPE    114    121    141     93     80
D693V8, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                4                114
  CLUS_2               10                121
  CLUS_3               10                141
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1462 MUTATED        2     10      3      1      5
  KIAA1462 WILD-TYPE    116    126    112     39     66
D693V9, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                2                116
  CLUS_2               10                126
  CLUS_3                3                112
  CLUS_4                1                 39
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1462 MUTATED        1      9      7      3      1
  KIAA1462 WILD-TYPE     47    100    123     98     91
D693V10, multiclass
        clus
vv       KIAA1462 MUTATED KIAA1462 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                9                100
  CLUS_3                7                123
  CLUS_4                3                 98
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(694) Variable = MGST2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MGST2 MUTATED        0      0      0      3
  MGST2 WILD-TYPE    135     92    172    173
D694V1, multiclass
        clus
vv       MGST2 MUTATED MGST2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MGST2 MUTATED        2      0      1
  MGST2 WILD-TYPE    213    155    161
D694V2, multiclass
        clus
vv       MGST2 MUTATED MGST2 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MGST2 MUTATED        1      1      0      0
  MGST2 WILD-TYPE    134    123    125     60
D694V3, multiclass
[1] "Remove cluster labels:" "MGST2 MUTATED"         
clus
  MGST2 MUTATED MGST2 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716      TCGA-BR-7717 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080      TCGA-BR-8081 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286      TCGA-BR-8289 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368      TCGA-BR-8369 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8380 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8588 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CG-4300 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4301      TCGA-CG-4304      TCGA-CG-4305      TCGA-CG-4306 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438      TCGA-CG-4442 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449      TCGA-CG-4455 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466      TCGA-CG-4469 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476      TCGA-CG-4477 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723      TCGA-CG-5724 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527      TCGA-D7-6528 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8573 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578      TCGA-D7-A4YT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX      TCGA-D7-A4YY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX      TCGA-D7-A6EY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748      TCGA-EQ-8122 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916      TCGA-FP-7998 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8602 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF      TCGA-HU-A4GQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MGST2 MUTATED        1      1      0
  MGST2 WILD-TYPE    252    101     89
D694V4, multiclass
[1] "Remove cluster labels:" "MGST2 MUTATED"         
clus
  MGST2 MUTATED MGST2 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716      TCGA-BR-7717 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080      TCGA-BR-8081 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286      TCGA-BR-8289 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368      TCGA-BR-8369 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8380 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8588 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CG-4300 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4301      TCGA-CG-4304      TCGA-CG-4305      TCGA-CG-4306 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438      TCGA-CG-4442 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449      TCGA-CG-4455 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466      TCGA-CG-4469 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476      TCGA-CG-4477 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723      TCGA-CG-5724 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527      TCGA-D7-6528 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8573 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578      TCGA-D7-A4YT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX      TCGA-D7-A4YY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX      TCGA-D7-A6EY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748      TCGA-EQ-8122 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916      TCGA-FP-7998 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8602 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF      TCGA-HU-A4GQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MGST2 MUTATED        0      1      2
  MGST2 WILD-TYPE    164    246    141
D694V5, multiclass
        clus
vv       MGST2 MUTATED MGST2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             1             246
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGST2 MUTATED        0      0      3      0      0
  MGST2 WILD-TYPE    121    104     88    121    117
D694V6, multiclass
        clus
vv       MGST2 MUTATED MGST2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MGST2 MUTATED        0      3      0
  MGST2 WILD-TYPE    159    248    165
D694V7, multiclass
        clus
vv       MGST2 MUTATED MGST2 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGST2 MUTATED        0      1      2      0      0
  MGST2 WILD-TYPE    118    130    149     94     81
D694V8, multiclass
        clus
vv       MGST2 MUTATED MGST2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGST2 MUTATED        0      0      0      0      2
  MGST2 WILD-TYPE    118    136    115     40     69
D694V9, multiclass
[1] "Remove cluster labels:" "MGST2 MUTATED"         
clus
  MGST2 MUTATED MGST2 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715      TCGA-BR-7717 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8080      TCGA-BR-8284 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368      TCGA-BR-8369 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8373 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8487 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8687 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452      TCGA-BR-A453 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48C 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CG-4437 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716      TCGA-CG-5717 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527      TCGA-D7-6528 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8574 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578      TCGA-D7-8579 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177      TCGA-F1-6874 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735      TCGA-FP-7829 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209      TCGA-FP-8210 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE      TCGA-FP-A9TM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGST2 MUTATED        0      0      2      0      0
  MGST2 WILD-TYPE     48    109    128    101     92
D694V10, multiclass
[1] "Remove cluster labels:" "MGST2 MUTATED"         
clus
  MGST2 MUTATED MGST2 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715      TCGA-BR-7717 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8080      TCGA-BR-8284 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368      TCGA-BR-8369 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8373 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8487 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8687 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452      TCGA-BR-A453 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48C 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CG-4437 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716      TCGA-CG-5717 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527      TCGA-D7-6528 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8574 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578      TCGA-D7-8579 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177      TCGA-F1-6874 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735      TCGA-FP-7829 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209      TCGA-FP-8210 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE      TCGA-FP-A9TM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"MGST2 WILD-TYPE" "MGST2 WILD-TYPE" 

Clustering(695) Variable = ZNF285 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF285 MUTATED        3      5      1      5
  ZNF285 WILD-TYPE    132     87    171    171
D695V1, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              5               87
  CLUS_3              1              171
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF285 MUTATED        7      4      1
  ZNF285 WILD-TYPE    208    151    161
D695V2, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              4              151
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF285 MUTATED        2      4      3      1
  ZNF285 WILD-TYPE    133    120    122     59
D695V3, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4              120
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF285 MUTATED        6      3      1
  ZNF285 WILD-TYPE    247     99     88
D695V4, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF285 MUTATED        1      8      5
  ZNF285 WILD-TYPE    163    239    138
D695V5, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              8              239
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF285 MUTATED        6      2      3      1      2
  ZNF285 WILD-TYPE    115    102     88    120    115
D695V6, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF285 MUTATED        2      9      3
  ZNF285 WILD-TYPE    157    242    162
D695V7, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              9              242
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF285 MUTATED        3      2      5      1      3
  ZNF285 WILD-TYPE    115    129    146     93     78
D695V8, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              2              129
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF285 MUTATED        2      3      2      2      3
  ZNF285 WILD-TYPE    116    133    113     38     68
D695V9, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF285 MUTATED        2      2      4      3      1
  ZNF285 WILD-TYPE     46    107    126     98     91
D695V10, multiclass
        clus
vv       ZNF285 MUTATED ZNF285 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              2              107
  CLUS_3              4              126
  CLUS_4              3               98
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(696) Variable = OPLAH MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OPLAH MUTATED        3      3      0     20
  OPLAH WILD-TYPE    132     89    172    156
D696V1, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             0             172
  CLUS_4            20             156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OPLAH MUTATED       18      2      1
  OPLAH WILD-TYPE    197    153    161
D696V2, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1            18             197
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OPLAH MUTATED       12      7      2      2
  OPLAH WILD-TYPE    123    117    123     58
D696V3, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1            12             123
  CLUS_2             7             117
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OPLAH MUTATED       18      3      2
  OPLAH WILD-TYPE    235     99     87
D696V4, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1            18             235
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OPLAH MUTATED        2     16      7
  OPLAH WILD-TYPE    162    231    136
D696V5, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             2             162
  CLUS_2            16             231
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPLAH MUTATED        2      3     14      1      5
  OPLAH WILD-TYPE    119    101     77    120    112
D696V6, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3            14              77
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OPLAH MUTATED        2     19      5
  OPLAH WILD-TYPE    157    232    160
D696V7, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             2             157
  CLUS_2            19             232
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPLAH MUTATED        6      8      9      0      3
  OPLAH WILD-TYPE    112    123    142     94     78
D696V8, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             6             112
  CLUS_2             8             123
  CLUS_3             9             142
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPLAH MUTATED        1      8      4      2      6
  OPLAH WILD-TYPE    117    128    111     38     65
D696V9, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             4             111
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OPLAH MUTATED        1      9      8      3      0
  OPLAH WILD-TYPE     47    100    122     98     92
D696V10, multiclass
        clus
vv       OPLAH MUTATED OPLAH WILD-TYPE
  CLUS_1             1              47
  CLUS_2             9             100
  CLUS_3             8             122
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(697) Variable = NRK MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRK MUTATED        6      4      6     15
  NRK WILD-TYPE    129     88    166    161
D697V1, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           6           129
  CLUS_2           4            88
  CLUS_3           6           166
  CLUS_4          15           161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NRK MUTATED       16      5      4
  NRK WILD-TYPE    199    150    158
D697V2, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1          16           199
  CLUS_2           5           150
  CLUS_3           4           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRK MUTATED       12      9      1      4
  NRK WILD-TYPE    123    115    124     56
D697V3, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1          12           123
  CLUS_2           9           115
  CLUS_3           1           124
  CLUS_4           4            56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NRK MUTATED       20      3      3
  NRK WILD-TYPE    233     99     86
D697V4, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1          20           233
  CLUS_2           3            99
  CLUS_3           3            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NRK MUTATED        6     18      7
  NRK WILD-TYPE    158    229    136
D697V5, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           6           158
  CLUS_2          18           229
  CLUS_3           7           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRK MUTATED        5      4     14      4      4
  NRK WILD-TYPE    116    100     77    117    113
D697V6, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           5           116
  CLUS_2           4           100
  CLUS_3          14            77
  CLUS_4           4           117
  CLUS_5           4           113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NRK MUTATED        6     21      3
  NRK WILD-TYPE    153    230    162
D697V7, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           6           153
  CLUS_2          21           230
  CLUS_3           3           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRK MUTATED        6     10     12      2      0
  NRK WILD-TYPE    112    121    139     92     81
D697V8, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           6           112
  CLUS_2          10           121
  CLUS_3          12           139
  CLUS_4           2            92
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRK MUTATED        4     10      2      1      4
  NRK WILD-TYPE    114    126    113     39     67
D697V9, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           4           114
  CLUS_2          10           126
  CLUS_3           2           113
  CLUS_4           1            39
  CLUS_5           4            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRK MUTATED        0      8      9      2      2
  NRK WILD-TYPE     48    101    121     99     90
D697V10, multiclass
        clus
vv       NRK MUTATED NRK WILD-TYPE
  CLUS_1           0            48
  CLUS_2           8           101
  CLUS_3           9           121
  CLUS_4           2            99
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(698) Variable = AP3M2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AP3M2 MUTATED        1      0      1     11
  AP3M2 WILD-TYPE    134     92    171    165
D698V1, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP3M2 MUTATED        7      2      1
  AP3M2 WILD-TYPE    208    153    161
D698V2, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AP3M2 MUTATED        4      4      3      0
  AP3M2 WILD-TYPE    131    120    122     60
D698V3, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP3M2 MUTATED        9      2      0
  AP3M2 WILD-TYPE    244    100     89
D698V4, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP3M2 MUTATED        1     10      2
  AP3M2 WILD-TYPE    163    237    141
D698V5, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            10             237
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP3M2 MUTATED        1      6      2      1      3
  AP3M2 WILD-TYPE    120     98     89    120    114
D698V6, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             6              98
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP3M2 MUTATED        1      9      3
  AP3M2 WILD-TYPE    158    242    162
D698V7, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP3M2 MUTATED        1      4      5      1      2
  AP3M2 WILD-TYPE    117    127    146     93     79
D698V8, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP3M2 MUTATED        1      3      1      0      2
  AP3M2 WILD-TYPE    117    133    114     40     69
D698V9, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP3M2 MUTATED        0      2      2      2      1
  AP3M2 WILD-TYPE     48    107    128     99     91
D698V10, multiclass
        clus
vv       AP3M2 MUTATED AP3M2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(699) Variable = CD93 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD93 MUTATED        1      2      6     15
  CD93 WILD-TYPE    134     90    166    161
D699V1, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            6            166
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD93 MUTATED       14      2      3
  CD93 WILD-TYPE    201    153    159
D699V2, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1           14            201
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD93 MUTATED        8      9      1      2
  CD93 WILD-TYPE    127    115    124     58
D699V3, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            9            115
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD93 MUTATED       13      4      3
  CD93 WILD-TYPE    240     98     86
D699V4, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            4             98
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD93 MUTATED        3     15      4
  CD93 WILD-TYPE    161    232    139
D699V5, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            3            161
  CLUS_2           15            232
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD93 MUTATED        2      5      9      2      4
  CD93 WILD-TYPE    119     99     82    119    113
D699V6, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            5             99
  CLUS_3            9             82
  CLUS_4            2            119
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CD93 MUTATED        6     16      2
  CD93 WILD-TYPE    153    235    163
D699V7, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            6            153
  CLUS_2           16            235
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD93 MUTATED        3     10      7      2      2
  CD93 WILD-TYPE    115    121    144     92     79
D699V8, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           10            121
  CLUS_3            7            144
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD93 MUTATED        3      7      0      0      4
  CD93 WILD-TYPE    115    129    115     40     67
D699V9, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            7            129
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD93 MUTATED        1      5      6      0      2
  CD93 WILD-TYPE     47    104    124    101     90
D699V10, multiclass
        clus
vv       CD93 MUTATED CD93 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            6            124
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(700) Variable = ZBTB38 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB38 MUTATED        2      2      3     15
  ZBTB38 WILD-TYPE    133     90    169    161
D700V1, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB38 MUTATED       14      3      3
  ZBTB38 WILD-TYPE    201    152    159
D700V2, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1             14              201
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB38 MUTATED        3      8      2      4
  ZBTB38 WILD-TYPE    132    116    123     56
D700V3, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              8              116
  CLUS_3              2              123
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB38 MUTATED       10      4      3
  ZBTB38 WILD-TYPE    243     98     86
D700V4, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB38 MUTATED        1     13      7
  ZBTB38 WILD-TYPE    163    234    136
D700V5, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              1              163
  CLUS_2             13              234
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB38 MUTATED        2      6      6      1      6
  ZBTB38 WILD-TYPE    119     98     85    120    111
D700V6, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              6               98
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB38 MUTATED        2     17      3
  ZBTB38 WILD-TYPE    157    234    162
D700V7, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             17              234
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB38 MUTATED        3      8      9      0      2
  ZBTB38 WILD-TYPE    115    123    142     94     79
D700V8, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              9              142
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB38 MUTATED        1      9      1      0      7
  ZBTB38 WILD-TYPE    117    127    114     40     64
D700V9, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              9              127
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB38 MUTATED        0      9      8      1      0
  ZBTB38 WILD-TYPE     48    100    122    100     92
D700V10, multiclass
        clus
vv       ZBTB38 MUTATED ZBTB38 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              9              100
  CLUS_3              8              122
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(701) Variable = PRAMEF14 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRAMEF14 MUTATED        2      0      0      4
  PRAMEF14 WILD-TYPE    133     92    172    172
D701V1, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRAMEF14 MUTATED        6      0      0
  PRAMEF14 WILD-TYPE    209    155    162
D701V2, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                6                209
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRAMEF14 MUTATED        3      2      1      0
  PRAMEF14 WILD-TYPE    132    122    124     60
D701V3, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                2                122
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRAMEF14 MUTATED        4      1      1
  PRAMEF14 WILD-TYPE    249    101     88
D701V4, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                1                101
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRAMEF14 MUTATED        1      1      3
  PRAMEF14 WILD-TYPE    163    246    140
D701V5, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                1                246
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRAMEF14 MUTATED        1      0      1      1      2
  PRAMEF14 WILD-TYPE    120    104     90    120    115
D701V6, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                1                 90
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRAMEF14 MUTATED        0      4      2
  PRAMEF14 WILD-TYPE    159    247    163
D701V7, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRAMEF14 MUTATED        0      3      1      0      2
  PRAMEF14 WILD-TYPE    118    128    150     94     79
D701V8, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                128
  CLUS_3                1                150
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRAMEF14 MUTATED        0      1      1      0      3
  PRAMEF14 WILD-TYPE    118    135    114     40     68
D701V9, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                135
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRAMEF14 MUTATED        0      3      1      1      0
  PRAMEF14 WILD-TYPE     48    106    129    100     92
D701V10, multiclass
        clus
vv       PRAMEF14 MUTATED PRAMEF14 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                1                129
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(702) Variable = ANKRD28 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD28 MUTATED        2      2      2     11
  ANKRD28 WILD-TYPE    133     90    170    165
D702V1, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD28 MUTATED        8      3      4
  ANKRD28 WILD-TYPE    207    152    158
D702V2, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               3               152
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD28 MUTATED        5      4      4      2
  ANKRD28 WILD-TYPE    130    120    121     58
D702V3, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               4               120
  CLUS_3               4               121
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD28 MUTATED       11      2      2
  ANKRD28 WILD-TYPE    242    100     87
D702V4, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1              11               242
  CLUS_2               2               100
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD28 MUTATED        4      8      5
  ANKRD28 WILD-TYPE    160    239    138
D702V5, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               8               239
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD28 MUTATED        2      2      4      3      6
  ANKRD28 WILD-TYPE    119    102     87    118    111
D702V6, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               4                87
  CLUS_4               3               118
  CLUS_5               6               111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD28 MUTATED        4      5      8
  ANKRD28 WILD-TYPE    155    246    157
D702V7, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               4               155
  CLUS_2               5               246
  CLUS_3               8               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD28 MUTATED        2      4      4      3      4
  ANKRD28 WILD-TYPE    116    127    147     91     77
D702V8, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               3                91
  CLUS_5               4                77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD28 MUTATED        1      5      3      2      3
  ANKRD28 WILD-TYPE    117    131    112     38     68
D702V9, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               131
  CLUS_3               3               112
  CLUS_4               2                38
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD28 MUTATED        0      4      3      4      3
  ANKRD28 WILD-TYPE     48    105    127     97     89
D702V10, multiclass
        clus
vv       ANKRD28 MUTATED ANKRD28 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               3               127
  CLUS_4               4                97
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(703) Variable = MKRN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKRN3 MUTATED        8      4      4      8
  MKRN3 WILD-TYPE    127     88    168    168
D703V1, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             4              88
  CLUS_3             4             168
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MKRN3 MUTATED       12      5      3
  MKRN3 WILD-TYPE    203    150    159
D703V2, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             5             150
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKRN3 MUTATED        7      8      3      0
  MKRN3 WILD-TYPE    128    116    122     60
D703V3, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             8             116
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MKRN3 MUTATED       11      4      3
  MKRN3 WILD-TYPE    242     98     86
D703V4, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MKRN3 MUTATED        7     13      3
  MKRN3 WILD-TYPE    157    234    140
D703V5, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            13             234
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKRN3 MUTATED        3      5      7      4      4
  MKRN3 WILD-TYPE    118     99     84    117    113
D703V6, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             7              84
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MKRN3 MUTATED        7     13      3
  MKRN3 WILD-TYPE    152    238    162
D703V7, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            13             238
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKRN3 MUTATED        5      7      7      2      2
  MKRN3 WILD-TYPE    113    124    144     92     79
D703V8, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             7             124
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKRN3 MUTATED        3      8      3      0      2
  MKRN3 WILD-TYPE    115    128    112     40     69
D703V9, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             128
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKRN3 MUTATED        3      5      3      3      2
  MKRN3 WILD-TYPE     45    104    127     98     90
D703V10, multiclass
        clus
vv       MKRN3 MUTATED MKRN3 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(704) Variable = MAN1C1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAN1C1 MUTATED        2      0      1      7
  MAN1C1 WILD-TYPE    133     92    171    169
D704V1, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAN1C1 MUTATED        8      1      0
  MAN1C1 WILD-TYPE    207    154    162
D704V2, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAN1C1 MUTATED        4      1      1      2
  MAN1C1 WILD-TYPE    131    123    124     58
D704V3, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1              123
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAN1C1 MUTATED        6      1      1
  MAN1C1 WILD-TYPE    247    101     88
D704V4, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAN1C1 MUTATED        1      6      4
  MAN1C1 WILD-TYPE    163    241    139
D704V5, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAN1C1 MUTATED        0      2      6      1      2
  MAN1C1 WILD-TYPE    121    102     85    120    115
D704V6, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAN1C1 MUTATED        1      9      1
  MAN1C1 WILD-TYPE    158    242    164
D704V7, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAN1C1 MUTATED        0      4      5      1      1
  MAN1C1 WILD-TYPE    118    127    146     93     80
D704V8, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAN1C1 MUTATED        1      2      0      1      5
  MAN1C1 WILD-TYPE    117    134    115     39     66
D704V9, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAN1C1 MUTATED        0      4      4      0      1
  MAN1C1 WILD-TYPE     48    105    126    101     91
D704V10, multiclass
        clus
vv       MAN1C1 MUTATED MAN1C1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(705) Variable = STK11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK11 MUTATED        1      2      4      4
  STK11 WILD-TYPE    134     90    168    172
D705V1, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             4             168
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK11 MUTATED        5      2      3
  STK11 WILD-TYPE    210    153    159
D705V2, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK11 MUTATED        4      3      0      1
  STK11 WILD-TYPE    131    121    125     59
D705V3, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK11 MUTATED        4      3      1
  STK11 WILD-TYPE    249     99     88
D705V4, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK11 MUTATED        6      3      2
  STK11 WILD-TYPE    158    244    141
D705V5, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             6             158
  CLUS_2             3             244
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK11 MUTATED        4      1      2      4      0
  STK11 WILD-TYPE    117    103     89    117    117
D705V6, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             4             117
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK11 MUTATED        6      4      1
  STK11 WILD-TYPE    153    247    164
D705V7, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             6             153
  CLUS_2             4             247
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK11 MUTATED        0      5      2      4      0
  STK11 WILD-TYPE    118    126    149     90     81
D705V8, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             4              90
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK11 MUTATED        4      3      1      2      0
  STK11 WILD-TYPE    114    133    114     38     71
D705V9, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK11 MUTATED        1      4      1      0      4
  STK11 WILD-TYPE     47    105    129    101     88
D705V10, multiclass
        clus
vv       STK11 MUTATED STK11 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(706) Variable = VPS13A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VPS13A MUTATED        5      4      3     30
  VPS13A WILD-TYPE    130     88    169    146
D706V1, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4             30              146
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13A MUTATED       25      5      5
  VPS13A WILD-TYPE    190    150    157
D706V2, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1             25              190
  CLUS_2              5              150
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VPS13A MUTATED       13     17      5      4
  VPS13A WILD-TYPE    122    107    120     56
D706V3, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1             13              122
  CLUS_2             17              107
  CLUS_3              5              120
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13A MUTATED       24      8      7
  VPS13A WILD-TYPE    229     94     82
D706V4, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1             24              229
  CLUS_2              8               94
  CLUS_3              7               82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13A MUTATED        7     24      8
  VPS13A WILD-TYPE    157    223    135
D706V5, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              7              157
  CLUS_2             24              223
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13A MUTATED        4      6     17      3      9
  VPS13A WILD-TYPE    117     98     74    118    108
D706V6, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              4              117
  CLUS_2              6               98
  CLUS_3             17               74
  CLUS_4              3              118
  CLUS_5              9              108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  VPS13A MUTATED        6     26     10
  VPS13A WILD-TYPE    153    225    155
D706V7, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              6              153
  CLUS_2             26              225
  CLUS_3             10              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13A MUTATED        5     15     15      3      4
  VPS13A WILD-TYPE    113    116    136     91     77
D706V8, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              5              113
  CLUS_2             15              116
  CLUS_3             15              136
  CLUS_4              3               91
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13A MUTATED        3     11      3      3     11
  VPS13A WILD-TYPE    115    125    112     37     60
D706V9, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              3              115
  CLUS_2             11              125
  CLUS_3              3              112
  CLUS_4              3               37
  CLUS_5             11               60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPS13A MUTATED        1     10     13      4      3
  VPS13A WILD-TYPE     47     99    117     97     89
D706V10, multiclass
        clus
vv       VPS13A MUTATED VPS13A WILD-TYPE
  CLUS_1              1               47
  CLUS_2             10               99
  CLUS_3             13              117
  CLUS_4              4               97
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(707) Variable = BEND5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BEND5 MUTATED        0      1      4      4
  BEND5 WILD-TYPE    135     91    168    172
D707V1, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND5 MUTATED        2      2      2
  BEND5 WILD-TYPE    213    153    160
D707V2, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BEND5 MUTATED        1      4      2      2
  BEND5 WILD-TYPE    134    120    123     58
D707V3, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND5 MUTATED        2      5      2
  BEND5 WILD-TYPE    251     97     87
D707V4, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND5 MUTATED        4      2      2
  BEND5 WILD-TYPE    160    245    141
D707V5, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             2             245
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND5 MUTATED        2      0      2      3      1
  BEND5 WILD-TYPE    119    104     89    118    116
D707V6, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             2              89
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEND5 MUTATED        4      4      1
  BEND5 WILD-TYPE    155    247    164
D707V7, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             4             247
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND5 MUTATED        2      1      3      3      0
  BEND5 WILD-TYPE    116    130    148     91     81
D707V8, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             1             130
  CLUS_3             3             148
  CLUS_4             3              91
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND5 MUTATED        3      0      0      0      2
  BEND5 WILD-TYPE    115    136    115     40     69
D707V9, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             0             136
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEND5 MUTATED        0      1      1      0      3
  BEND5 WILD-TYPE     48    108    129    101     89
D707V10, multiclass
        clus
vv       BEND5 MUTATED BEND5 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(708) Variable = TPTE2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPTE2 MUTATED        7      2      5      8
  TPTE2 WILD-TYPE    128     90    167    168
D708V1, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             2              90
  CLUS_3             5             167
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TPTE2 MUTATED       10      7      3
  TPTE2 WILD-TYPE    205    148    159
D708V2, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             7             148
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TPTE2 MUTATED        6      6      2      5
  TPTE2 WILD-TYPE    129    118    123     55
D708V3, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TPTE2 MUTATED       13      5      1
  TPTE2 WILD-TYPE    240     97     88
D708V4, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TPTE2 MUTATED        3     15      3
  TPTE2 WILD-TYPE    161    232    140
D708V5, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            15             232
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPTE2 MUTATED        4      6      8      2      1
  TPTE2 WILD-TYPE    117     98     83    119    116
D708V6, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             6              98
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TPTE2 MUTATED        3     14      4
  TPTE2 WILD-TYPE    156    237    161
D708V7, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            14             237
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPTE2 MUTATED        5      8      6      2      0
  TPTE2 WILD-TYPE    113    123    145     92     81
D708V8, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             8             123
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPTE2 MUTATED        3      8      1      1      4
  TPTE2 WILD-TYPE    115    128    114     39     67
D708V9, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             128
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TPTE2 MUTATED        2      6      5      2      2
  TPTE2 WILD-TYPE     46    103    125     99     90
D708V10, multiclass
        clus
vv       TPTE2 MUTATED TPTE2 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(709) Variable = NFE2L1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NFE2L1 MUTATED        0      2      4      9
  NFE2L1 WILD-TYPE    135     90    168    167
D709V1, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L1 MUTATED        4      3      4
  NFE2L1 WILD-TYPE    211    152    158
D709V2, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              3              152
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NFE2L1 MUTATED        5      5      1      1
  NFE2L1 WILD-TYPE    130    119    124     59
D709V3, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L1 MUTATED        8      3      1
  NFE2L1 WILD-TYPE    245     99     88
D709V4, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L1 MUTATED        3      8      4
  NFE2L1 WILD-TYPE    161    239    139
D709V5, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              8              239
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L1 MUTATED        1      5      4      2      3
  NFE2L1 WILD-TYPE    120     99     87    119    114
D709V6, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              4               87
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NFE2L1 MUTATED        3      7      5
  NFE2L1 WILD-TYPE    156    244    160
D709V7, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              7              244
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L1 MUTATED        2      5      4      2      2
  NFE2L1 WILD-TYPE    116    126    147     92     79
D709V8, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              2               92
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L1 MUTATED        2      2      5      0      1
  NFE2L1 WILD-TYPE    116    134    110     40     70
D709V9, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              2              134
  CLUS_3              5              110
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NFE2L1 MUTATED        0      4      2      2      2
  NFE2L1 WILD-TYPE     48    105    128     99     90
D709V10, multiclass
        clus
vv       NFE2L1 MUTATED NFE2L1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(710) Variable = ITGAV MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGAV MUTATED        3      4      5     11
  ITGAV WILD-TYPE    132     88    167    165
D710V1, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             5             167
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAV MUTATED       12      6      3
  ITGAV WILD-TYPE    203    149    159
D710V2, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1            12             203
  CLUS_2             6             149
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGAV MUTATED        5      5      6      3
  ITGAV WILD-TYPE    130    119    119     57
D710V3, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5             119
  CLUS_3             6             119
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAV MUTATED       12      2      5
  ITGAV WILD-TYPE    241    100     84
D710V4, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1            12             241
  CLUS_2             2             100
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAV MUTATED        5     11      6
  ITGAV WILD-TYPE    159    236    137
D710V5, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             5             159
  CLUS_2            11             236
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAV MUTATED        2      4      8      4      4
  ITGAV WILD-TYPE    119    100     83    117    113
D710V6, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAV MUTATED        6     13      4
  ITGAV WILD-TYPE    153    238    161
D710V7, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             6             153
  CLUS_2            13             238
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAV MUTATED        4      9      4      4      2
  ITGAV WILD-TYPE    114    122    147     90     79
D710V8, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             122
  CLUS_3             4             147
  CLUS_4             4              90
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAV MUTATED        3      8      3      1      4
  ITGAV WILD-TYPE    115    128    112     39     67
D710V9, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             128
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAV MUTATED        0      9      3      3      4
  ITGAV WILD-TYPE     48    100    127     98     88
D710V10, multiclass
        clus
vv       ITGAV MUTATED ITGAV WILD-TYPE
  CLUS_1             0              48
  CLUS_2             9             100
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(711) Variable = BRCA2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRCA2 MUTATED        3      3     12     24
  BRCA2 WILD-TYPE    132     89    160    152
D711V1, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3            12             160
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA2 MUTATED       25      6      6
  BRCA2 WILD-TYPE    190    149    156
D711V2, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1            25             190
  CLUS_2             6             149
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRCA2 MUTATED       17     12      6      2
  BRCA2 WILD-TYPE    118    112    119     58
D711V3, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1            17             118
  CLUS_2            12             112
  CLUS_3             6             119
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA2 MUTATED       29      5      3
  BRCA2 WILD-TYPE    224     97     86
D711V4, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1            29             224
  CLUS_2             5              97
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA2 MUTATED        8     20      9
  BRCA2 WILD-TYPE    156    227    134
D711V5, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             8             156
  CLUS_2            20             227
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA2 MUTATED        5      7     15      5      5
  BRCA2 WILD-TYPE    116     97     76    116    112
D711V6, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             7              97
  CLUS_3            15              76
  CLUS_4             5             116
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA2 MUTATED        6     28      8
  BRCA2 WILD-TYPE    153    223    157
D711V7, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            28             223
  CLUS_3             8             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA2 MUTATED        4     19     11      4      4
  BRCA2 WILD-TYPE    114    112    140     90     77
D711V8, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            19             112
  CLUS_3            11             140
  CLUS_4             4              90
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA2 MUTATED        5     13      4      4      8
  BRCA2 WILD-TYPE    113    123    111     36     63
D711V9, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            13             123
  CLUS_3             4             111
  CLUS_4             4              36
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA2 MUTATED        3     11     11      5      4
  BRCA2 WILD-TYPE     45     98    119     96     88
D711V10, multiclass
        clus
vv       BRCA2 MUTATED BRCA2 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            11              98
  CLUS_3            11             119
  CLUS_4             5              96
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(712) Variable = CWF19L2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CWF19L2 MUTATED        1      4      1     14
  CWF19L2 WILD-TYPE    134     88    171    162
D712V1, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               4                88
  CLUS_3               1               171
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CWF19L2 MUTATED       12      1      6
  CWF19L2 WILD-TYPE    203    154    156
D712V2, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1              12               203
  CLUS_2               1               154
  CLUS_3               6               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CWF19L2 MUTATED        4      7      1      3
  CWF19L2 WILD-TYPE    131    117    124     57
D712V3, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               7               117
  CLUS_3               1               124
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CWF19L2 MUTATED       11      4      0
  CWF19L2 WILD-TYPE    242     98     89
D712V4, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1              11               242
  CLUS_2               4                98
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CWF19L2 MUTATED        2     13      4
  CWF19L2 WILD-TYPE    162    234    139
D712V5, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               2               162
  CLUS_2              13               234
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWF19L2 MUTATED        2      6      6      2      3
  CWF19L2 WILD-TYPE    119     98     85    119    114
D712V6, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               6                98
  CLUS_3               6                85
  CLUS_4               2               119
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CWF19L2 MUTATED        1     12      7
  CWF19L2 WILD-TYPE    158    239    158
D712V7, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               1               158
  CLUS_2              12               239
  CLUS_3               7               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWF19L2 MUTATED        3      8      6      1      2
  CWF19L2 WILD-TYPE    115    123    145     93     79
D712V8, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               8               123
  CLUS_3               6               145
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWF19L2 MUTATED        1      8      2      1      5
  CWF19L2 WILD-TYPE    117    128    113     39     66
D712V9, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               8               128
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWF19L2 MUTATED        0      8      6      2      1
  CWF19L2 WILD-TYPE     48    101    124     99     91
D712V10, multiclass
        clus
vv       CWF19L2 MUTATED CWF19L2 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               8               101
  CLUS_3               6               124
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(713) Variable = GBP3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GBP3 MUTATED        0      1      0      5
  GBP3 WILD-TYPE    135     91    172    171
D713V1, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GBP3 MUTATED        3      1      2
  GBP3 WILD-TYPE    212    154    160
D713V2, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GBP3 MUTATED        3      3      0      0
  GBP3 WILD-TYPE    132    121    125     60
D713V3, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GBP3 MUTATED        5      1      0
  GBP3 WILD-TYPE    248    101     89
D713V4, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GBP3 MUTATED        2      3      1
  GBP3 WILD-TYPE    162    244    142
D713V5, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GBP3 MUTATED        0      2      4      0      0
  GBP3 WILD-TYPE    121    102     87    121    117
D713V6, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GBP3 MUTATED        1      4      1
  GBP3 WILD-TYPE    158    247    164
D713V7, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GBP3 MUTATED        0      3      3      0      0
  GBP3 WILD-TYPE    118    128    148     94     81
D713V8, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GBP3 MUTATED        0      5      0      0      0
  GBP3 WILD-TYPE    118    131    115     40     71
D713V9, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GBP3 MUTATED        0      4      1      0      0
  GBP3 WILD-TYPE     48    105    129    101     92
D713V10, multiclass
        clus
vv       GBP3 MUTATED GBP3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(714) Variable = FAM186B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM186B MUTATED        3      0      1      9
  FAM186B WILD-TYPE    132     92    171    167
D714V1, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM186B MUTATED        6      2      0
  FAM186B WILD-TYPE    209    153    162
D714V2, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               6               209
  CLUS_2               2               153
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM186B MUTATED        3      5      2      1
  FAM186B WILD-TYPE    132    119    123     59
D714V3, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               3               132
  CLUS_2               5               119
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM186B MUTATED        6      4      1
  FAM186B WILD-TYPE    247     98     88
D714V4, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               6               247
  CLUS_2               4                98
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM186B MUTATED        1      8      3
  FAM186B WILD-TYPE    163    239    140
D714V5, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               1               163
  CLUS_2               8               239
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM186B MUTATED        2      2      6      0      2
  FAM186B WILD-TYPE    119    102     85    121    115
D714V6, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               6                85
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM186B MUTATED        1     11      1
  FAM186B WILD-TYPE    158    240    164
D714V7, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               1               158
  CLUS_2              11               240
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM186B MUTATED        1      6      5      0      1
  FAM186B WILD-TYPE    117    125    146     94     80
D714V8, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM186B MUTATED        0      4      1      2      1
  FAM186B WILD-TYPE    118    132    114     38     70
D714V9, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               1               114
  CLUS_4               2                38
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM186B MUTATED        1      5      2      0      0
  FAM186B WILD-TYPE     47    104    128    101     92
D714V10, multiclass
        clus
vv       FAM186B MUTATED FAM186B WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(715) Variable = DOCK9 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK9 MUTATED        1      0      4     17
  DOCK9 WILD-TYPE    134     92    168    159
D715V1, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK9 MUTATED       12      4      2
  DOCK9 WILD-TYPE    203    151    160
D715V2, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             4             151
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOCK9 MUTATED       11      7      1      1
  DOCK9 WILD-TYPE    124    117    124     59
D715V3, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK9 MUTATED       16      3      1
  DOCK9 WILD-TYPE    237     99     88
D715V4, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1            16             237
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK9 MUTATED        5     13      3
  DOCK9 WILD-TYPE    159    234    140
D715V5, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            13             234
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK9 MUTATED        1      4     11      3      2
  DOCK9 WILD-TYPE    120    100     80    118    115
D715V6, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3            11              80
  CLUS_4             3             118
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DOCK9 MUTATED        4     15      3
  DOCK9 WILD-TYPE    155    236    162
D715V7, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            15             236
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK9 MUTATED        2      9      7      3      1
  DOCK9 WILD-TYPE    116    122    144     91     80
D715V8, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK9 MUTATED        2      5      1      3      5
  DOCK9 WILD-TYPE    116    131    114     37     66
D715V9, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             3              37
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOCK9 MUTATED        1      3      8      1      3
  DOCK9 WILD-TYPE     47    106    122    100     89
D715V10, multiclass
        clus
vv       DOCK9 MUTATED DOCK9 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             8             122
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(716) Variable = TMPRSS5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS5 MUTATED        1      1      1      1
  TMPRSS5 WILD-TYPE    134     91    171    175
D716V1, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               1               175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS5 MUTATED        2      1      1
  TMPRSS5 WILD-TYPE    213    154    161
D716V2, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMPRSS5 MUTATED        3      0      0      0
  TMPRSS5 WILD-TYPE    132    124    125     60
D716V3, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0               124
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS5 MUTATED        3      0      0
  TMPRSS5 WILD-TYPE    250    102     89
D716V4, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS5 MUTATED        1      2      1
  TMPRSS5 WILD-TYPE    163    245    142
D716V5, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMPRSS5 MUTATED        0      0      1      2      1
  TMPRSS5 WILD-TYPE    121    104     90    119    116
D716V6, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               1                90
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMPRSS5 MUTATED        1      2      1
  TMPRSS5 WILD-TYPE    158    249    164
D716V7, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               2               249
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMPRSS5 MUTATED        1      1      0      1      1
  TMPRSS5 WILD-TYPE    117    130    151     93     80
D716V8, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               0               151
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMPRSS5 MUTATED        1      2      1      0      0
  TMPRSS5 WILD-TYPE    117    134    114     40     71
D716V9, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMPRSS5 MUTATED        0      2      0      1      1
  TMPRSS5 WILD-TYPE     48    107    130    100     91
D716V10, multiclass
        clus
vv       TMPRSS5 MUTATED TMPRSS5 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(717) Variable = FAM104A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM104A MUTATED        0      1      1      3
  FAM104A WILD-TYPE    135     91    171    173
D717V1, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM104A MUTATED        1      2      2
  FAM104A WILD-TYPE    214    153    160
D717V2, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               1               214
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM104A MUTATED        2      1      1      0
  FAM104A WILD-TYPE    133    123    124     60
D717V3, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1               123
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM104A MUTATED        3      1      0
  FAM104A WILD-TYPE    250    101     89
D717V4, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM104A MUTATED        2      2      1
  FAM104A WILD-TYPE    162    245    142
D717V5, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               2               162
  CLUS_2               2               245
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM104A MUTATED        1      0      1      2      1
  FAM104A WILD-TYPE    120    104     90    119    116
D717V6, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               1                90
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM104A MUTATED        2      2      1
  FAM104A WILD-TYPE    157    249    164
D717V7, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               2               157
  CLUS_2               2               249
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM104A MUTATED        0      1      1      2      1
  FAM104A WILD-TYPE    118    130    150     92     80
D717V8, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM104A MUTATED        2      1      1      0      0
  FAM104A WILD-TYPE    116    135    114     40     71
D717V9, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM104A MUTATED        0      1      0      1      2
  FAM104A WILD-TYPE     48    108    130    100     90
D717V10, multiclass
        clus
vv       FAM104A MUTATED FAM104A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(718) Variable = EFHD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHD1 MUTATED        0      0      2      5
  EFHD1 WILD-TYPE    135     92    170    171
D718V1, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHD1 MUTATED        6      0      1
  EFHD1 WILD-TYPE    209    155    161
D718V2, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHD1 MUTATED        3      2      0      1
  EFHD1 WILD-TYPE    132    122    125     59
D718V3, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHD1 MUTATED        5      1      0
  EFHD1 WILD-TYPE    248    101     89
D718V4, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHD1 MUTATED        0      6      1
  EFHD1 WILD-TYPE    164    241    142
D718V5, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             6             241
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHD1 MUTATED        0      2      4      0      1
  EFHD1 WILD-TYPE    121    102     87    121    116
D718V6, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHD1 MUTATED        1      5      1
  EFHD1 WILD-TYPE    158    246    164
D718V7, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHD1 MUTATED        0      5      2      0      0
  EFHD1 WILD-TYPE    118    126    149     94     81
D718V8, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHD1 MUTATED        0      3      0      0      2
  EFHD1 WILD-TYPE    118    133    115     40     69
D718V9, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHD1 MUTATED        0      3      2      0      0
  EFHD1 WILD-TYPE     48    106    128    101     92
D718V10, multiclass
        clus
vv       EFHD1 MUTATED EFHD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(719) Variable = CD4 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD4 MUTATED        1      0      0     10
  CD4 WILD-TYPE    134     92    172    166
D719V1, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           1           134
  CLUS_2           0            92
  CLUS_3           0           172
  CLUS_4          10           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD4 MUTATED        8      0      2
  CD4 WILD-TYPE    207    155    160
D719V2, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           8           207
  CLUS_2           0           155
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD4 MUTATED        6      4      0      0
  CD4 WILD-TYPE    129    120    125     60
D719V3, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           6           129
  CLUS_2           4           120
  CLUS_3           0           125
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD4 MUTATED        6      3      1
  CD4 WILD-TYPE    247     99     88
D719V4, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           6           247
  CLUS_2           3            99
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD4 MUTATED        2      7      2
  CD4 WILD-TYPE    162    240    141
D719V5, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           2           162
  CLUS_2           7           240
  CLUS_3           2           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD4 MUTATED        1      2      6      0      2
  CD4 WILD-TYPE    120    102     85    121    115
D719V6, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           1           120
  CLUS_2           2           102
  CLUS_3           6            85
  CLUS_4           0           121
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD4 MUTATED        3      7      1
  CD4 WILD-TYPE    156    244    164
D719V7, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           3           156
  CLUS_2           7           244
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD4 MUTATED        2      5      3      0      1
  CD4 WILD-TYPE    116    126    148     94     80
D719V8, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           2           116
  CLUS_2           5           126
  CLUS_3           3           148
  CLUS_4           0            94
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD4 MUTATED        0      5      1      1      3
  CD4 WILD-TYPE    118    131    114     39     68
D719V9, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           0           118
  CLUS_2           5           131
  CLUS_3           1           114
  CLUS_4           1            39
  CLUS_5           3            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD4 MUTATED        1      3      4      2      0
  CD4 WILD-TYPE     47    106    126     99     92
D719V10, multiclass
        clus
vv       CD4 MUTATED CD4 WILD-TYPE
  CLUS_1           1            47
  CLUS_2           3           106
  CLUS_3           4           126
  CLUS_4           2            99
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(720) Variable = OR6C65 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR6C65 MUTATED        0      0      2      3
  OR6C65 WILD-TYPE    135     92    170    173
D720V1, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C65 MUTATED        2      1      1
  OR6C65 WILD-TYPE    213    154    161
D720V2, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              2              213
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR6C65 MUTATED        2      2      1      0
  OR6C65 WILD-TYPE    133    122    124     60
D720V3, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C65 MUTATED        3      1      1
  OR6C65 WILD-TYPE    250    101     88
D720V4, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C65 MUTATED        1      3      1
  OR6C65 WILD-TYPE    163    244    142
D720V5, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C65 MUTATED        0      3      0      1      1
  OR6C65 WILD-TYPE    121    101     91    120    116
D720V6, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              0               91
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C65 MUTATED        1      3      1
  OR6C65 WILD-TYPE    158    248    164
D720V7, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              3              248
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C65 MUTATED        0      2      2      1      0
  OR6C65 WILD-TYPE    118    129    149     93     81
D720V8, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C65 MUTATED        1      3      0      0      0
  OR6C65 WILD-TYPE    117    133    115     40     71
D720V9, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C65 MUTATED        0      2      1      0      1
  OR6C65 WILD-TYPE     48    107    129    101     91
D720V10, multiclass
        clus
vv       OR6C65 MUTATED OR6C65 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(721) Variable = SPATA2L MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPATA2L MUTATED        2      0      1      5
  SPATA2L WILD-TYPE    133     92    171    171
D721V1, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA2L MUTATED        5      1      1
  SPATA2L WILD-TYPE    210    154    161
D721V2, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               5               210
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPATA2L MUTATED        3      1      2      1
  SPATA2L WILD-TYPE    132    123    123     59
D721V3, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1               123
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA2L MUTATED        5      0      2
  SPATA2L WILD-TYPE    248    102     87
D721V4, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA2L MUTATED        2      3      2
  SPATA2L WILD-TYPE    162    244    141
D721V5, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               2               162
  CLUS_2               3               244
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA2L MUTATED        1      2      1      1      2
  SPATA2L WILD-TYPE    120    102     90    120    115
D721V6, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               1                90
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SPATA2L MUTATED        1      4      3
  SPATA2L WILD-TYPE    158    247    162
D721V7, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               1               158
  CLUS_2               4               247
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA2L MUTATED        1      2      4      1      0
  SPATA2L WILD-TYPE    117    129    147     93     81
D721V8, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               129
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA2L MUTATED        1      1      1      1      3
  SPATA2L WILD-TYPE    117    135    114     39     68
D721V9, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA2L MUTATED        0      2      3      1      1
  SPATA2L WILD-TYPE     48    107    127    100     91
D721V10, multiclass
        clus
vv       SPATA2L MUTATED SPATA2L WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(722) Variable = GPR115 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR115 MUTATED        0      0      0      6
  GPR115 WILD-TYPE    135     92    172    170
D722V1, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR115 MUTATED        4      0      0
  GPR115 WILD-TYPE    211    155    162
D722V2, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR115 MUTATED        4      2      0      0
  GPR115 WILD-TYPE    131    122    125     60
D722V3, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR115 MUTATED        5      1      0
  GPR115 WILD-TYPE    248    101     89
D722V4, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR115 MUTATED        2      3      1
  GPR115 WILD-TYPE    162    244    142
D722V5, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR115 MUTATED        0      1      5      0      0
  GPR115 WILD-TYPE    121    103     86    121    117
D722V6, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR115 MUTATED        0      6      0
  GPR115 WILD-TYPE    159    245    165
D722V7, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              6              245
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR115 MUTATED        0      3      3      0      0
  GPR115 WILD-TYPE    118    128    148     94     81
D722V8, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR115 MUTATED        0      2      0      1      1
  GPR115 WILD-TYPE    118    134    115     39     70
D722V9, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR115 MUTATED        0      2      2      0      0
  GPR115 WILD-TYPE     48    107    128    101     92
D722V10, multiclass
        clus
vv       GPR115 MUTATED GPR115 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(723) Variable = TRPM6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPM6 MUTATED        3      4      8     13
  TRPM6 WILD-TYPE    132     88    164    163
D723V1, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             8             164
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPM6 MUTATED       16      4      8
  TRPM6 WILD-TYPE    199    151    154
D723V2, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             4             151
  CLUS_3             8             154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRPM6 MUTATED       11     10      3      3
  TRPM6 WILD-TYPE    124    114    122     57
D723V3, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            10             114
  CLUS_3             3             122
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPM6 MUTATED       20      5      2
  TRPM6 WILD-TYPE    233     97     87
D723V4, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1            20             233
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPM6 MUTATED        6     14      9
  TRPM6 WILD-TYPE    158    233    134
D723V5, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            14             233
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRPM6 MUTATED        5      6      9      3      6
  TRPM6 WILD-TYPE    116     98     82    118    111
D723V6, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             6              98
  CLUS_3             9              82
  CLUS_4             3             118
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TRPM6 MUTATED        6     16      7
  TRPM6 WILD-TYPE    153    235    158
D723V7, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            16             235
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRPM6 MUTATED        7      7     10      4      1
  TRPM6 WILD-TYPE    111    124    141     90     80
D723V8, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             7             111
  CLUS_2             7             124
  CLUS_3            10             141
  CLUS_4             4              90
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRPM6 MUTATED        5     11      3      2      6
  TRPM6 WILD-TYPE    113    125    112     38     65
D723V9, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            11             125
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRPM6 MUTATED        3      9      7      4      4
  TRPM6 WILD-TYPE     45    100    123     97     88
D723V10, multiclass
        clus
vv       TRPM6 MUTATED TRPM6 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             9             100
  CLUS_3             7             123
  CLUS_4             4              97
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(724) Variable = MKL1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKL1 MUTATED        1      1      3     12
  MKL1 WILD-TYPE    134     91    169    164
D724V1, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL1 MUTATED        9      2      3
  MKL1 WILD-TYPE    206    153    159
D724V2, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKL1 MUTATED        6      6      0      1
  MKL1 WILD-TYPE    129    118    125     59
D724V3, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            6            118
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL1 MUTATED       11      2      0
  MKL1 WILD-TYPE    242    100     89
D724V4, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL1 MUTATED        5      8      2
  MKL1 WILD-TYPE    159    239    141
D724V5, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            5            159
  CLUS_2            8            239
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL1 MUTATED        2      4      6      1      2
  MKL1 WILD-TYPE    119    100     85    120    115
D724V6, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            4            100
  CLUS_3            6             85
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MKL1 MUTATED        2     11      4
  MKL1 WILD-TYPE    157    240    161
D724V7, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           11            240
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL1 MUTATED        2      7      5      1      2
  MKL1 WILD-TYPE    116    124    146     93     79
D724V8, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            124
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL1 MUTATED        0      6      2      2      3
  MKL1 WILD-TYPE    118    130    113     38     68
D724V9, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKL1 MUTATED        1      4      4      3      1
  MKL1 WILD-TYPE     47    105    126     98     91
D724V10, multiclass
        clus
vv       MKL1 MUTATED MKL1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(725) Variable = ZNF185 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF185 MUTATED        2      4      5      4
  ZNF185 WILD-TYPE    133     88    167    172
D725V1, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              5              167
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF185 MUTATED        7      4      3
  ZNF185 WILD-TYPE    208    151    159
D725V2, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              4              151
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF185 MUTATED        4      4      1      2
  ZNF185 WILD-TYPE    131    120    124     58
D725V3, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF185 MUTATED        7      4      0
  ZNF185 WILD-TYPE    246     98     89
D725V4, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              4               98
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF185 MUTATED        5      8      1
  ZNF185 WILD-TYPE    159    239    142
D725V5, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              8              239
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF185 MUTATED        3      3      2      4      2
  ZNF185 WILD-TYPE    118    101     89    117    115
D725V6, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              3              101
  CLUS_3              2               89
  CLUS_4              4              117
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF185 MUTATED        6      6      3
  ZNF185 WILD-TYPE    153    245    162
D725V7, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              6              153
  CLUS_2              6              245
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF185 MUTATED        3      3      5      3      1
  ZNF185 WILD-TYPE    115    128    146     91     80
D725V8, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              128
  CLUS_3              5              146
  CLUS_4              3               91
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF185 MUTATED        4      4      3      0      3
  ZNF185 WILD-TYPE    114    132    112     40     68
D725V9, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF185 MUTATED        2      2      6      1      3
  ZNF185 WILD-TYPE     46    107    124    100     89
D725V10, multiclass
        clus
vv       ZNF185 MUTATED ZNF185 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              2              107
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(726) Variable = SOAT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOAT1 MUTATED        1      1      0      9
  SOAT1 WILD-TYPE    134     91    172    167
D726V1, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOAT1 MUTATED        7      0      2
  SOAT1 WILD-TYPE    208    155    160
D726V2, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOAT1 MUTATED        5      4      0      1
  SOAT1 WILD-TYPE    130    120    125     59
D726V3, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOAT1 MUTATED        8      2      0
  SOAT1 WILD-TYPE    245    100     89
D726V4, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOAT1 MUTATED        1     10      0
  SOAT1 WILD-TYPE    163    237    143
D726V5, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            10             237
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOAT1 MUTATED        2      2      6      0      1
  SOAT1 WILD-TYPE    119    102     85    121    116
D726V6, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SOAT1 MUTATED        1      8      2
  SOAT1 WILD-TYPE    158    243    163
D726V7, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOAT1 MUTATED        1      3      7      0      0
  SOAT1 WILD-TYPE    117    128    144     94     81
D726V8, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOAT1 MUTATED        0      6      1      1      0
  SOAT1 WILD-TYPE    118    130    114     39     71
D726V9, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOAT1 MUTATED        0      3      5      0      0
  SOAT1 WILD-TYPE     48    106    125    101     92
D726V10, multiclass
        clus
vv       SOAT1 MUTATED SOAT1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(727) Variable = TNKS1BP1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNKS1BP1 MUTATED        3      4      5     17
  TNKS1BP1 WILD-TYPE    132     88    167    159
D727V1, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                4                 88
  CLUS_3                5                167
  CLUS_4               17                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNKS1BP1 MUTATED       15      4      6
  TNKS1BP1 WILD-TYPE    200    151    156
D727V2, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1               15                200
  CLUS_2                4                151
  CLUS_3                6                156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNKS1BP1 MUTATED        8     12      2      3
  TNKS1BP1 WILD-TYPE    127    112    123     57
D727V3, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                8                127
  CLUS_2               12                112
  CLUS_3                2                123
  CLUS_4                3                 57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNKS1BP1 MUTATED       16      8      1
  TNKS1BP1 WILD-TYPE    237     94     88
D727V4, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1               16                237
  CLUS_2                8                 94
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNKS1BP1 MUTATED        4     18      6
  TNKS1BP1 WILD-TYPE    160    229    137
D727V5, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                4                160
  CLUS_2               18                229
  CLUS_3                6                137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNKS1BP1 MUTATED        5      7      8      3      5
  TNKS1BP1 WILD-TYPE    116     97     83    118    112
D727V6, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                5                116
  CLUS_2                7                 97
  CLUS_3                8                 83
  CLUS_4                3                118
  CLUS_5                5                112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNKS1BP1 MUTATED        7     18      5
  TNKS1BP1 WILD-TYPE    152    233    160
D727V7, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                7                152
  CLUS_2               18                233
  CLUS_3                5                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNKS1BP1 MUTATED        5      7     13      3      2
  TNKS1BP1 WILD-TYPE    113    124    138     91     79
D727V8, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                5                113
  CLUS_2                7                124
  CLUS_3               13                138
  CLUS_4                3                 91
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNKS1BP1 MUTATED        4      7      4      1      8
  TNKS1BP1 WILD-TYPE    114    129    111     39     63
D727V9, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                4                114
  CLUS_2                7                129
  CLUS_3                4                111
  CLUS_4                1                 39
  CLUS_5                8                 63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNKS1BP1 MUTATED        1      6     11      3      3
  TNKS1BP1 WILD-TYPE     47    103    119     98     89
D727V10, multiclass
        clus
vv       TNKS1BP1 MUTATED TNKS1BP1 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                6                103
  CLUS_3               11                119
  CLUS_4                3                 98
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(728) Variable = NOB1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOB1 MUTATED        0      1      1      6
  NOB1 WILD-TYPE    135     91    171    170
D728V1, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOB1 MUTATED        4      0      1
  NOB1 WILD-TYPE    211    155    161
D728V2, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOB1 MUTATED        1      4      0      0
  NOB1 WILD-TYPE    134    120    125     60
D728V3, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOB1 MUTATED        2      3      0
  NOB1 WILD-TYPE    251     99     89
D728V4, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            2            251
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOB1 MUTATED        0      5      3
  NOB1 WILD-TYPE    164    242    140
D728V5, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOB1 MUTATED        0      3      2      1      2
  NOB1 WILD-TYPE    121    101     89    120    115
D728V6, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOB1 MUTATED        0      6      2
  NOB1 WILD-TYPE    159    245    163
D728V7, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOB1 MUTATED        1      3      3      1      0
  NOB1 WILD-TYPE    117    128    148     93     81
D728V8, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOB1 MUTATED        0      3      1      0      1
  NOB1 WILD-TYPE    118    133    114     40     70
D728V9, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOB1 MUTATED        0      1      3      0      1
  NOB1 WILD-TYPE     48    108    127    101     91
D728V10, multiclass
        clus
vv       NOB1 MUTATED NOB1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(729) Variable = DENND4C MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DENND4C MUTATED        4      3      1     12
  DENND4C WILD-TYPE    131     89    171    164
D729V1, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3                89
  CLUS_3               1               171
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND4C MUTATED       11      3      3
  DENND4C WILD-TYPE    204    152    159
D729V2, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1              11               204
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DENND4C MUTATED        4      7      0      3
  DENND4C WILD-TYPE    131    117    125     57
D729V3, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               4               131
  CLUS_2               7               117
  CLUS_3               0               125
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND4C MUTATED       10      4      0
  DENND4C WILD-TYPE    243     98     89
D729V4, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1              10               243
  CLUS_2               4                98
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND4C MUTATED        5     11      2
  DENND4C WILD-TYPE    159    236    141
D729V5, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               5               159
  CLUS_2              11               236
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND4C MUTATED        7      5      5      1      0
  DENND4C WILD-TYPE    114     99     86    120    117
D729V6, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               7               114
  CLUS_2               5                99
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND4C MUTATED        6     11      3
  DENND4C WILD-TYPE    153    240    162
D729V7, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               6               153
  CLUS_2              11               240
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND4C MUTATED        7      6      6      0      1
  DENND4C WILD-TYPE    111    125    145     94     80
D729V8, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               7               111
  CLUS_2               6               125
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND4C MUTATED        2      4      1      3      4
  DENND4C WILD-TYPE    116    132    114     37     67
D729V9, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               132
  CLUS_3               1               114
  CLUS_4               3                37
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND4C MUTATED        4      2      4      4      0
  DENND4C WILD-TYPE     44    107    126     97     92
D729V10, multiclass
        clus
vv       DENND4C MUTATED DENND4C WILD-TYPE
  CLUS_1               4                44
  CLUS_2               2               107
  CLUS_3               4               126
  CLUS_4               4                97
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(730) Variable = EFNA4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFNA4 MUTATED        0      1      0      5
  EFNA4 WILD-TYPE    135     91    172    171
D730V1, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNA4 MUTATED        5      0      1
  EFNA4 WILD-TYPE    210    155    161
D730V2, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFNA4 MUTATED        2      3      0      0
  EFNA4 WILD-TYPE    133    121    125     60
D730V3, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNA4 MUTATED        4      1      0
  EFNA4 WILD-TYPE    249    101     89
D730V4, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNA4 MUTATED        2      4      0
  EFNA4 WILD-TYPE    162    243    143
D730V5, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNA4 MUTATED        0      2      3      1      0
  EFNA4 WILD-TYPE    121    102     88    120    117
D730V6, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFNA4 MUTATED        1      3      2
  EFNA4 WILD-TYPE    158    248    163
D730V7, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             3             248
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNA4 MUTATED        1      3      1      1      0
  EFNA4 WILD-TYPE    117    128    150     93     81
D730V8, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             1             150
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNA4 MUTATED        0      3      2      0      1
  EFNA4 WILD-TYPE    118    133    113     40     70
D730V9, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFNA4 MUTATED        0      3      1      1      1
  EFNA4 WILD-TYPE     48    106    129    100     91
D730V10, multiclass
        clus
vv       EFNA4 MUTATED EFNA4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(731) Variable = TAF7L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF7L MUTATED        1      0      2      8
  TAF7L WILD-TYPE    134     92    170    168
D731V1, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF7L MUTATED        5      2      4
  TAF7L WILD-TYPE    210    153    158
D731V2, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF7L MUTATED        1      7      2      1
  TAF7L WILD-TYPE    134    117    123     59
D731V3, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             1             134
  CLUS_2             7             117
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF7L MUTATED        4      5      2
  TAF7L WILD-TYPE    249     97     87
D731V4, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             4             249
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF7L MUTATED        2      5      3
  TAF7L WILD-TYPE    162    242    140
D731V5, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF7L MUTATED        0      2      3      2      3
  TAF7L WILD-TYPE    121    102     88    119    114
D731V6, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF7L MUTATED        2      8      1
  TAF7L WILD-TYPE    157    243    164
D731V7, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             2             157
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF7L MUTATED        0      2      6      2      1
  TAF7L WILD-TYPE    118    129    145     92     80
D731V8, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF7L MUTATED        1      1      1      0      6
  TAF7L WILD-TYPE    117    135    114     40     65
D731V9, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF7L MUTATED        0      1      6      0      2
  TAF7L WILD-TYPE     48    108    124    101     90
D731V10, multiclass
        clus
vv       TAF7L MUTATED TAF7L WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(732) Variable = SLC25A17 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC25A17 MUTATED        2      0      0      2
  SLC25A17 WILD-TYPE    133     92    172    174
D732V1, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                2                174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A17 MUTATED        2      0      0
  SLC25A17 WILD-TYPE    213    155    162
D732V2, multiclass
[1] "Remove cluster labels:" "SLC25A17 MUTATED"      
clus
  SLC25A17 MUTATED SLC25A17 WILD-TYPE 
                 2                530 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7716 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7717         TCGA-BR-7722         TCGA-BR-7723 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7901         TCGA-BR-7957         TCGA-BR-7958 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7959         TCGA-BR-8058         TCGA-BR-8059 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8060         TCGA-BR-8077         TCGA-BR-8078 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8080         TCGA-BR-8081         TCGA-BR-8284 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8285         TCGA-BR-8286         TCGA-BR-8289 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8291         TCGA-BR-8295         TCGA-BR-8297 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8360         TCGA-BR-8361         TCGA-BR-8363 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8364         TCGA-BR-8365         TCGA-BR-8366 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8367         TCGA-BR-8368         TCGA-BR-8369 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8370         TCGA-BR-8371         TCGA-BR-8372 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8373         TCGA-BR-8380         TCGA-BR-8381 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8484         TCGA-BR-8485         TCGA-BR-8486 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8487         TCGA-BR-8588         TCGA-BR-8589 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8590         TCGA-BR-8591         TCGA-BR-8592 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8676         TCGA-BR-8677         TCGA-BR-8678 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8679         TCGA-BR-8680         TCGA-BR-8682 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8683         TCGA-BR-8686         TCGA-BR-8687 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8690         TCGA-BR-A44T         TCGA-BR-A44U 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A452         TCGA-BR-A453         TCGA-BR-A4CQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4CR         TCGA-BR-A4CS         TCGA-BR-A4IU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4IV         TCGA-BR-A4IY         TCGA-BR-A4IZ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J1         TCGA-BR-A4J2         TCGA-BR-A4J4 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J5         TCGA-BR-A4J6         TCGA-BR-A4J7 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J8         TCGA-BR-A4PD         TCGA-BR-A4PE 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4PF         TCGA-BR-A4QI         TCGA-BR-A4QL 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4QM         TCGA-CD-5798         TCGA-CD-5799 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5800         TCGA-CD-5801         TCGA-CD-5802 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5803         TCGA-CD-5804         TCGA-CD-5813 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8524         TCGA-CD-8525         TCGA-CD-8526 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8527         TCGA-CD-8528         TCGA-CD-8529 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8530         TCGA-CD-8531         TCGA-CD-8532 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8533         TCGA-CD-8534         TCGA-CD-8535 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8536         TCGA-CD-A486         TCGA-CD-A487 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-A489         TCGA-CD-A48A         TCGA-CD-A48C 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-A4MH         TCGA-CD-A4MI         TCGA-CD-A4MJ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-4437         TCGA-CG-4441         TCGA-CG-5716 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5717         TCGA-CG-5718         TCGA-CG-5719 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5720         TCGA-CG-5721         TCGA-CG-5722 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5723         TCGA-CG-5724         TCGA-CG-5725 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5726         TCGA-CG-5727         TCGA-CG-5728 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5730         TCGA-CG-5732         TCGA-CG-5733 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5734         TCGA-D7-5577         TCGA-D7-5578 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-5579         TCGA-D7-6518         TCGA-D7-6519 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6520         TCGA-D7-6521         TCGA-D7-6522 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6524         TCGA-D7-6525         TCGA-D7-6526 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6527         TCGA-D7-6528         TCGA-D7-6815 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6817         TCGA-D7-6818         TCGA-D7-6820 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6822         TCGA-D7-8570         TCGA-D7-8572 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8573         TCGA-D7-8574         TCGA-D7-8575 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8576         TCGA-D7-8578         TCGA-D7-8579 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A4YT         TCGA-D7-A4YU         TCGA-D7-A4YV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A4YX         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6ET         TCGA-D7-A6EV         TCGA-D7-A6EX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6EY         TCGA-D7-A6EZ         TCGA-D7-A6F0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6F2         TCGA-D7-A747         TCGA-D7-A748 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A74A         TCGA-D7-A74B         TCGA-EQ-5647 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-EQ-A4SO         TCGA-F1-6177 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-F1-6874         TCGA-F1-6875         TCGA-F1-A448 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-F1-A72C         TCGA-FP-7735         TCGA-FP-7829 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-7916         TCGA-FP-7998         TCGA-FP-8099 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-8209         TCGA-FP-8210         TCGA-FP-8211 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-8631         TCGA-FP-A4BE         TCGA-FP-A4BF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-A8CX         TCGA-FP-A9TM         TCGA-HF-7131 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HF-7132         TCGA-HF-7133         TCGA-HF-7134 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HF-7136         TCGA-HF-A5NB         TCGA-HJ-7597 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-8238         TCGA-HU-8243         TCGA-HU-8244 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-8249         TCGA-HU-8602         TCGA-HU-8604 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-8608         TCGA-HU-8610         TCGA-HU-A4G2 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4G3         TCGA-HU-A4G6         TCGA-HU-A4G8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4G9         TCGA-HU-A4GC         TCGA-HU-A4GD 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GF         TCGA-HU-A4GH         TCGA-HU-A4GJ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GN         TCGA-HU-A4GP         TCGA-HU-A4GQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GT         TCGA-HU-A4GU         TCGA-HU-A4GX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GY         TCGA-HU-A4H0         TCGA-HU-A4H2 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4H3         TCGA-HU-A4H4         TCGA-HU-A4H5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4H6         TCGA-HU-A4H8         TCGA-HU-A4HB 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4HD         TCGA-IC-A6RE         TCGA-IC-A6RF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A3I8         TCGA-IG-A3QL         TCGA-IG-A3Y9 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A3YA         TCGA-IG-A3YB         TCGA-IG-A3YC 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A4P3         TCGA-IG-A4QS         TCGA-IG-A4QT 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A50L         TCGA-IG-A51D         TCGA-IG-A5B8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A5S3         TCGA-IG-A625         TCGA-IG-A6QS 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A7DP         TCGA-IG-A8O2         TCGA-IG-A97H 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A97I         TCGA-IN-7806         TCGA-IN-7808 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-8462         TCGA-IN-8663         TCGA-IN-A6RI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A6RJ         TCGA-IN-A6RL         TCGA-IN-A6RN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A6RO         TCGA-IN-A6RP         TCGA-IN-A6RR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A6RS         TCGA-IN-A7NR         TCGA-IN-A7NT 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A7NU         TCGA-IN-AB1V         TCGA-IN-AB1X 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IP-7968         TCGA-JY-A6F8         TCGA-JY-A6FA 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6FB         TCGA-JY-A6FD         TCGA-JY-A6FE 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6FG         TCGA-JY-A6FH         TCGA-JY-A938 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A939         TCGA-JY-A93C         TCGA-JY-A93D 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A93E         TCGA-JY-A93F         TCGA-KB-A6F5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-KB-A6F7         TCGA-KB-A93G         TCGA-KB-A93J 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-KH-A6WC         TCGA-L5-A43C         TCGA-L5-A43E 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OJ         TCGA-L5-A4OM         TCGA-L5-A4ON 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OO         TCGA-L5-A4OP         TCGA-L5-A4OQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OR         TCGA-L5-A4OS         TCGA-L5-A4OT 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OU         TCGA-L5-A4OW         TCGA-L5-A4OX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A88S         TCGA-L5-A88T         TCGA-L5-A88V 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A88W         TCGA-L5-A88Y         TCGA-L5-A88Z 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A891         TCGA-L5-A893         TCGA-L5-A8NE 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NF         TCGA-L5-A8NG         TCGA-L5-A8NH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NI         TCGA-L5-A8NJ         TCGA-L5-A8NK 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NL         TCGA-L5-A8NM         TCGA-L5-A8NN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NQ         TCGA-L5-A8NR         TCGA-L5-A8NS 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NT         TCGA-L5-A8NU         TCGA-L5-A8NV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NW         TCGA-L7-A56G         TCGA-L7-A6VZ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49K         TCGA-LN-A49L         TCGA-LN-A49M 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49N         TCGA-LN-A49O         TCGA-LN-A49P 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49R         TCGA-LN-A49S         TCGA-LN-A49U 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49V         TCGA-LN-A49W         TCGA-LN-A49X 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49Y         TCGA-LN-A4A1         TCGA-LN-A4A2 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4A3         TCGA-LN-A4A4         TCGA-LN-A4A5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4A6         TCGA-LN-A4A8         TCGA-LN-A4A9 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4MQ         TCGA-LN-A4MR         TCGA-LN-A5U5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A5U6         TCGA-LN-A5U7         TCGA-LN-A7HV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-MX-A5UJ         TCGA-MX-A663 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-MX-A666         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A7O7         TCGA-R5-A7ZE         TCGA-R5-A7ZF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A7ZI         TCGA-R5-A7ZR         TCGA-R5-A804 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A805         TCGA-R6-A6DN         TCGA-R6-A6DQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6KZ         TCGA-R6-A6L4         TCGA-R6-A6L6 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6XG         TCGA-R6-A6XQ         TCGA-R6-A6Y0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6Y2         TCGA-R6-A8W5         TCGA-R6-A8W8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A8WC         TCGA-R6-A8WG         TCGA-RD-A7BS 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A7BT         TCGA-RD-A7BW         TCGA-RD-A7C1 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8MV         TCGA-RD-A8MW         TCGA-RD-A8N0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8N1         TCGA-RD-A8N2         TCGA-RD-A8N4 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8N5         TCGA-RD-A8N6         TCGA-RD-A8N9 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RE-A7BO         TCGA-S8-A6BV         TCGA-S8-A6BW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-SW-A7EA         TCGA-SW-A7EB         TCGA-V5-A7RB 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-V5-A7RC         TCGA-V5-A7RE         TCGA-V5-AASV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-V5-AASW         TCGA-V5-AASX         TCGA-VQ-A8DL 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8DT         TCGA-VQ-A8DU         TCGA-VQ-A8DV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8DZ         TCGA-VQ-A8E2         TCGA-VQ-A8E7 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8P2         TCGA-VQ-A8P3         TCGA-VQ-A8PE 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8PK         TCGA-VQ-A8PM         TCGA-VQ-A8PQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A91Q         TCGA-VQ-A91U         TCGA-VQ-A91V 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A92D         TCGA-VQ-A94T         TCGA-VQ-AA64 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA68         TCGA-VQ-AA69         TCGA-VQ-AA6A 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA6B         TCGA-VQ-AA6F         TCGA-VQ-AA6G 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA6I         TCGA-VQ-AA6J         TCGA-VQ-AA6K 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EO         TCGA-VR-A8EP         TCGA-VR-A8EQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8ER         TCGA-VR-A8ET         TCGA-VR-A8EU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EW         TCGA-VR-A8EX         TCGA-VR-A8EY 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EZ         TCGA-VR-A8Q7         TCGA-VR-AA4D 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-AA4G         TCGA-VR-AA7B         TCGA-VR-AA7D 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-AA7I         TCGA-X8-AAAR         TCGA-XP-A8T6 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-XP-A8T7         TCGA-XP-A8T8         TCGA-Z6-A8JD 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-Z6-A8JE         TCGA-Z6-A9VB         TCGA-Z6-AAPN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-ZA-A8F6         TCGA-ZR-A9CJ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC25A17 MUTATED        1      2      0      1
  SLC25A17 WILD-TYPE    134    122    125     59
D732V3, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                122
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A17 MUTATED        1      3      0
  SLC25A17 WILD-TYPE    252     99     89
D732V4, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                1                252
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A17 MUTATED        0      3      1
  SLC25A17 WILD-TYPE    164    244    142
D732V5, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                3                244
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A17 MUTATED        0      1      3      0      0
  SLC25A17 WILD-TYPE    121    103     88    121    117
D732V6, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                3                 88
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A17 MUTATED        0      4      0
  SLC25A17 WILD-TYPE    159    247    165
D732V7, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                4                247
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A17 MUTATED        1      2      1      0      0
  SLC25A17 WILD-TYPE    117    129    150     94     81
D732V8, multiclass
        clus
vv       SLC25A17 MUTATED SLC25A17 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                129
  CLUS_3                1                150
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A17 MUTATED        0      0      0      1      1
  SLC25A17 WILD-TYPE    118    136    115     39     70
D732V9, multiclass
[1] "Remove cluster labels:" "SLC25A17 MUTATED"      
clus
  SLC25A17 MUTATED SLC25A17 WILD-TYPE 
                 2                478 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7717 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7723         TCGA-BR-7901         TCGA-BR-7957 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7958         TCGA-BR-7959         TCGA-BR-8058 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8059         TCGA-BR-8060         TCGA-BR-8077 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8078         TCGA-BR-8080         TCGA-BR-8284 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8286         TCGA-BR-8289         TCGA-BR-8291 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8295         TCGA-BR-8297         TCGA-BR-8360 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8361         TCGA-BR-8363         TCGA-BR-8364 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8365         TCGA-BR-8368         TCGA-BR-8369 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8370         TCGA-BR-8371         TCGA-BR-8372 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8373         TCGA-BR-8380         TCGA-BR-8381 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8485         TCGA-BR-8486         TCGA-BR-8487 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8588         TCGA-BR-8590         TCGA-BR-8591 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8592         TCGA-BR-8676         TCGA-BR-8677 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8678         TCGA-BR-8679         TCGA-BR-8680 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8682         TCGA-BR-8683         TCGA-BR-8687 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8690         TCGA-BR-A44T         TCGA-BR-A452 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A453         TCGA-BR-A4CQ         TCGA-BR-A4CR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4CS         TCGA-BR-A4IU         TCGA-BR-A4IV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4IY         TCGA-BR-A4IZ         TCGA-BR-A4J1 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J5         TCGA-BR-A4J6         TCGA-BR-A4J7 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J8         TCGA-BR-A4PD         TCGA-BR-A4QI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4QL         TCGA-BR-A4QM         TCGA-CD-5798 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5799         TCGA-CD-5800         TCGA-CD-5801 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5802         TCGA-CD-5803         TCGA-CD-5804 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5813         TCGA-CD-8524         TCGA-CD-8525 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8526         TCGA-CD-8527         TCGA-CD-8529 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8530         TCGA-CD-8531         TCGA-CD-8532 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8533         TCGA-CD-8534         TCGA-CD-8535 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8536         TCGA-CD-A486         TCGA-CD-A487 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-A489         TCGA-CD-A48C         TCGA-CD-A4MH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-A4MI         TCGA-CG-4437         TCGA-CG-4441 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-4449         TCGA-CG-5716         TCGA-CG-5717 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5718         TCGA-CG-5719         TCGA-CG-5720 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5721         TCGA-CG-5722         TCGA-CG-5723 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5724         TCGA-CG-5725         TCGA-CG-5726 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5727         TCGA-CG-5728         TCGA-CG-5730 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5732         TCGA-CG-5733         TCGA-CG-5734 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-5577         TCGA-D7-5578         TCGA-D7-5579 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6518         TCGA-D7-6519         TCGA-D7-6520 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6521         TCGA-D7-6522         TCGA-D7-6524 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6525         TCGA-D7-6526         TCGA-D7-6527 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6528         TCGA-D7-6815         TCGA-D7-6817 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6818         TCGA-D7-6820         TCGA-D7-6822 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8570         TCGA-D7-8572         TCGA-D7-8574 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8575         TCGA-D7-8576         TCGA-D7-8578 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8579         TCGA-D7-A4YT         TCGA-D7-A4YU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A4YV         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6ET         TCGA-D7-A6EV         TCGA-D7-A6EX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6EY         TCGA-D7-A6EZ         TCGA-D7-A6F0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6F2         TCGA-D7-A747         TCGA-D7-A748 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A74A         TCGA-D7-A74B         TCGA-EQ-5647 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-F1-6177         TCGA-F1-6874 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-F1-6875         TCGA-F1-A448         TCGA-FP-7735 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-7829         TCGA-FP-7998         TCGA-FP-8099 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-8209         TCGA-FP-8210         TCGA-FP-8211 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-8631         TCGA-FP-A4BE         TCGA-FP-A9TM 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HF-7131         TCGA-HF-7132         TCGA-HF-7134 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HF-7136         TCGA-HU-8238         TCGA-HU-8243 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-8602         TCGA-HU-8604         TCGA-HU-8608 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4G3         TCGA-HU-A4G8         TCGA-HU-A4GC 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GD         TCGA-HU-A4GF         TCGA-HU-A4GH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GJ         TCGA-HU-A4GN         TCGA-HU-A4GQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GT         TCGA-HU-A4GX         TCGA-HU-A4GY 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H4         TCGA-HU-A4H5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4H6         TCGA-HU-A4H8         TCGA-HU-A4HB 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IC-A6RE         TCGA-IC-A6RF         TCGA-IG-A3I8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A3QL         TCGA-IG-A3Y9         TCGA-IG-A3YA 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A3YB         TCGA-IG-A3YC         TCGA-IG-A4P3 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A4QS         TCGA-IG-A4QT         TCGA-IG-A50L 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A51D         TCGA-IG-A5B8         TCGA-IG-A5S3 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A625         TCGA-IG-A6QS         TCGA-IG-A7DP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A8O2         TCGA-IG-A97H         TCGA-IG-A97I 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-7806         TCGA-IN-7808         TCGA-IN-8462 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-8663         TCGA-IN-A6RI         TCGA-IN-A6RJ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A6RL         TCGA-IN-A6RN         TCGA-IN-A6RP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A7NR         TCGA-IN-A7NT         TCGA-IN-A7NU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-AB1V         TCGA-IN-AB1X         TCGA-IP-7968 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6F8         TCGA-JY-A6FA         TCGA-JY-A6FB 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6FD         TCGA-JY-A6FE         TCGA-JY-A6FG 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6FH         TCGA-JY-A938         TCGA-JY-A939 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A93C         TCGA-JY-A93D         TCGA-JY-A93E 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-KB-A6F5         TCGA-KB-A6F7         TCGA-KB-A93J 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-KH-A6WC         TCGA-L5-A43C         TCGA-L5-A43E 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OM         TCGA-L5-A4ON         TCGA-L5-A4OO 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OP         TCGA-L5-A4OQ         TCGA-L5-A4OR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OS         TCGA-L5-A4OT         TCGA-L5-A4OU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OW         TCGA-L5-A4OX         TCGA-L5-A88S 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A88T         TCGA-L5-A88V         TCGA-L5-A88W 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A88Y         TCGA-L5-A88Z         TCGA-L5-A891 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A893         TCGA-L5-A8NE         TCGA-L5-A8NF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NG         TCGA-L5-A8NH         TCGA-L5-A8NI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NJ         TCGA-L5-A8NK         TCGA-L5-A8NL 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NM         TCGA-L5-A8NN         TCGA-L5-A8NQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NR         TCGA-L5-A8NS         TCGA-L5-A8NT 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NU         TCGA-L5-A8NV         TCGA-L5-A8NW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L7-A56G         TCGA-L7-A6VZ         TCGA-LN-A49K 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49L         TCGA-LN-A49M         TCGA-LN-A49N 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49O         TCGA-LN-A49P         TCGA-LN-A49R 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49S         TCGA-LN-A49U         TCGA-LN-A49W 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A4         TCGA-LN-A4A5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4A6         TCGA-LN-A4A8         TCGA-LN-A4A9 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4MQ         TCGA-LN-A4MR         TCGA-LN-A5U5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A5U6         TCGA-LN-A5U7         TCGA-LN-A7HV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-MX-A5UJ         TCGA-MX-A663 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-MX-A666         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A7O7         TCGA-R5-A7ZE         TCGA-R5-A7ZF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A7ZI         TCGA-R5-A7ZR         TCGA-R5-A804 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A805         TCGA-R6-A6DN         TCGA-R6-A6DQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6KZ         TCGA-R6-A6L4         TCGA-R6-A6L6 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6XG         TCGA-R6-A6XQ         TCGA-R6-A6Y0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6Y2         TCGA-R6-A8W5         TCGA-R6-A8W8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A8WG         TCGA-RD-A7BS         TCGA-RD-A7BW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A7C1         TCGA-RD-A8MV         TCGA-RD-A8MW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8N0         TCGA-RD-A8N1         TCGA-RD-A8N5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8N6         TCGA-RD-A8N9         TCGA-RE-A7BO 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-S8-A6BV         TCGA-S8-A6BW         TCGA-SW-A7EA 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-SW-A7EB         TCGA-V5-A7RB         TCGA-V5-A7RC 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-V5-A7RE         TCGA-V5-AASW         TCGA-V5-AASX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8DL         TCGA-VQ-A8DU         TCGA-VQ-A8DV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8E2         TCGA-VQ-A8E7         TCGA-VQ-A8P2 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8P3         TCGA-VQ-A8PE         TCGA-VQ-A8PK 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8PM         TCGA-VQ-A8PQ         TCGA-VQ-A91Q 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A91U         TCGA-VQ-A91V         TCGA-VQ-A92D 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A94T         TCGA-VQ-AA64         TCGA-VQ-AA68 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA69         TCGA-VQ-AA6A         TCGA-VQ-AA6B 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA6F         TCGA-VQ-AA6G         TCGA-VQ-AA6I 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA6J         TCGA-VQ-AA6K         TCGA-VR-A8EO 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EP         TCGA-VR-A8EQ         TCGA-VR-A8ER 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8ET         TCGA-VR-A8EU         TCGA-VR-A8EW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EX         TCGA-VR-A8EY         TCGA-VR-A8EZ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8Q7         TCGA-VR-AA4D         TCGA-VR-AA4G 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-AA7B         TCGA-VR-AA7D         TCGA-VR-AA7I 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-X8-AAAR         TCGA-XP-A8T6         TCGA-XP-A8T7 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-XP-A8T8         TCGA-Z6-A8JD         TCGA-Z6-A8JE 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-Z6-A9VB         TCGA-Z6-AAPN         TCGA-ZA-A8F6 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-ZR-A9CJ 
"SLC25A17 WILD-TYPE" 
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A17 MUTATED        0      1      1      0      0
  SLC25A17 WILD-TYPE     48    108    129    101     92
D732V10, multiclass
[1] "Remove cluster labels:" "SLC25A17 MUTATED"      
clus
  SLC25A17 MUTATED SLC25A17 WILD-TYPE 
                 2                478 
        TCGA-2H-A9GF         TCGA-2H-A9GG         TCGA-2H-A9GH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GI         TCGA-2H-A9GJ         TCGA-2H-A9GK 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GL         TCGA-2H-A9GM         TCGA-2H-A9GN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-2H-A9GO         TCGA-2H-A9GQ         TCGA-2H-A9GR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-B7-5816         TCGA-B7-5818         TCGA-B7-A5TI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-B7-A5TJ         TCGA-B7-A5TK         TCGA-B7-A5TN 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6452         TCGA-BR-6453         TCGA-BR-6454 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6455         TCGA-BR-6456         TCGA-BR-6457 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6458         TCGA-BR-6563         TCGA-BR-6564 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6565         TCGA-BR-6566         TCGA-BR-6705 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6706         TCGA-BR-6707         TCGA-BR-6709 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6710         TCGA-BR-6801         TCGA-BR-6802 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-6803         TCGA-BR-6852         TCGA-BR-7196 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7197         TCGA-BR-7703         TCGA-BR-7704 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7707         TCGA-BR-7715         TCGA-BR-7717 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7723         TCGA-BR-7901         TCGA-BR-7957 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-7958         TCGA-BR-7959         TCGA-BR-8058 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8059         TCGA-BR-8060         TCGA-BR-8077 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8078         TCGA-BR-8080         TCGA-BR-8284 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8286         TCGA-BR-8289         TCGA-BR-8291 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8295         TCGA-BR-8297         TCGA-BR-8360 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8361         TCGA-BR-8363         TCGA-BR-8364 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8365         TCGA-BR-8368         TCGA-BR-8369 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8370         TCGA-BR-8371         TCGA-BR-8372 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8373         TCGA-BR-8380         TCGA-BR-8381 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8382         TCGA-BR-8384         TCGA-BR-8483 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8485         TCGA-BR-8486         TCGA-BR-8487 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8588         TCGA-BR-8590         TCGA-BR-8591 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8592         TCGA-BR-8676         TCGA-BR-8677 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8678         TCGA-BR-8679         TCGA-BR-8680 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8682         TCGA-BR-8683         TCGA-BR-8687 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-8690         TCGA-BR-A44T         TCGA-BR-A452 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A453         TCGA-BR-A4CQ         TCGA-BR-A4CR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4CS         TCGA-BR-A4IU         TCGA-BR-A4IV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4IY         TCGA-BR-A4IZ         TCGA-BR-A4J1 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J5         TCGA-BR-A4J6         TCGA-BR-A4J7 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4J8         TCGA-BR-A4PD         TCGA-BR-A4QI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-BR-A4QL         TCGA-BR-A4QM         TCGA-CD-5798 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5799         TCGA-CD-5800         TCGA-CD-5801 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5802         TCGA-CD-5803         TCGA-CD-5804 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-5813         TCGA-CD-8524         TCGA-CD-8525 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8526         TCGA-CD-8527         TCGA-CD-8529 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8530         TCGA-CD-8531         TCGA-CD-8532 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8533         TCGA-CD-8534         TCGA-CD-8535 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-8536         TCGA-CD-A486         TCGA-CD-A487 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-A489         TCGA-CD-A48C         TCGA-CD-A4MH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CD-A4MI         TCGA-CG-4437         TCGA-CG-4441 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-4449         TCGA-CG-5716         TCGA-CG-5717 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5718         TCGA-CG-5719         TCGA-CG-5720 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5721         TCGA-CG-5722         TCGA-CG-5723 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5724         TCGA-CG-5725         TCGA-CG-5726 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5727         TCGA-CG-5728         TCGA-CG-5730 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-CG-5732         TCGA-CG-5733         TCGA-CG-5734 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-5577         TCGA-D7-5578         TCGA-D7-5579 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6518         TCGA-D7-6519         TCGA-D7-6520 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6521         TCGA-D7-6522         TCGA-D7-6524 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6525         TCGA-D7-6526         TCGA-D7-6527 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6528         TCGA-D7-6815         TCGA-D7-6817 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-6818         TCGA-D7-6820         TCGA-D7-6822 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8570         TCGA-D7-8572         TCGA-D7-8574 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8575         TCGA-D7-8576         TCGA-D7-8578 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-8579         TCGA-D7-A4YT         TCGA-D7-A4YU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A4YV         TCGA-D7-A4YY         TCGA-D7-A4Z0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6ET         TCGA-D7-A6EV         TCGA-D7-A6EX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6EY         TCGA-D7-A6EZ         TCGA-D7-A6F0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A6F2         TCGA-D7-A747         TCGA-D7-A748 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-D7-A74A         TCGA-D7-A74B         TCGA-EQ-5647 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-EQ-8122         TCGA-F1-6177         TCGA-F1-6874 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-F1-6875         TCGA-F1-A448         TCGA-FP-7735 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-7829         TCGA-FP-7998         TCGA-FP-8099 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-8209         TCGA-FP-8210         TCGA-FP-8211 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-FP-8631         TCGA-FP-A4BE         TCGA-FP-A9TM 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HF-7131         TCGA-HF-7132         TCGA-HF-7134 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HF-7136         TCGA-HU-8238         TCGA-HU-8243 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-8602         TCGA-HU-8604         TCGA-HU-8608 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4G3         TCGA-HU-A4G8         TCGA-HU-A4GC 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GD         TCGA-HU-A4GF         TCGA-HU-A4GH 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GJ         TCGA-HU-A4GN         TCGA-HU-A4GQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4GT         TCGA-HU-A4GX         TCGA-HU-A4GY 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4H2         TCGA-HU-A4H4         TCGA-HU-A4H5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-HU-A4H6         TCGA-HU-A4H8         TCGA-HU-A4HB 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IC-A6RE         TCGA-IC-A6RF         TCGA-IG-A3I8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A3QL         TCGA-IG-A3Y9         TCGA-IG-A3YA 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A3YB         TCGA-IG-A3YC         TCGA-IG-A4P3 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A4QS         TCGA-IG-A4QT         TCGA-IG-A50L 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A51D         TCGA-IG-A5B8         TCGA-IG-A5S3 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A625         TCGA-IG-A6QS         TCGA-IG-A7DP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IG-A8O2         TCGA-IG-A97H         TCGA-IG-A97I 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-7806         TCGA-IN-7808         TCGA-IN-8462 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-8663         TCGA-IN-A6RI         TCGA-IN-A6RJ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A6RL         TCGA-IN-A6RN         TCGA-IN-A6RP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-A7NR         TCGA-IN-A7NT         TCGA-IN-A7NU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-IN-AB1V         TCGA-IN-AB1X         TCGA-IP-7968 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6F8         TCGA-JY-A6FA         TCGA-JY-A6FB 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6FD         TCGA-JY-A6FE         TCGA-JY-A6FG 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A6FH         TCGA-JY-A938         TCGA-JY-A939 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-JY-A93C         TCGA-JY-A93D         TCGA-JY-A93E 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-KB-A6F5         TCGA-KB-A6F7         TCGA-KB-A93J 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-KH-A6WC         TCGA-L5-A43C         TCGA-L5-A43E 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A43H         TCGA-L5-A43I         TCGA-L5-A43J 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A43M         TCGA-L5-A4OE         TCGA-L5-A4OF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OG         TCGA-L5-A4OH         TCGA-L5-A4OI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OM         TCGA-L5-A4ON         TCGA-L5-A4OO 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OP         TCGA-L5-A4OQ         TCGA-L5-A4OR 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OS         TCGA-L5-A4OT         TCGA-L5-A4OU 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A4OW         TCGA-L5-A4OX         TCGA-L5-A88S 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A88T         TCGA-L5-A88V         TCGA-L5-A88W 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A88Y         TCGA-L5-A88Z         TCGA-L5-A891 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A893         TCGA-L5-A8NE         TCGA-L5-A8NF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NG         TCGA-L5-A8NH         TCGA-L5-A8NI 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NJ         TCGA-L5-A8NK         TCGA-L5-A8NL 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NM         TCGA-L5-A8NN         TCGA-L5-A8NQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NR         TCGA-L5-A8NS         TCGA-L5-A8NT 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L5-A8NU         TCGA-L5-A8NV         TCGA-L5-A8NW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-L7-A56G         TCGA-L7-A6VZ         TCGA-LN-A49K 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49L         TCGA-LN-A49M         TCGA-LN-A49N 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49O         TCGA-LN-A49P         TCGA-LN-A49R 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49S         TCGA-LN-A49U         TCGA-LN-A49W 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A49X         TCGA-LN-A49Y         TCGA-LN-A4A1 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4A2         TCGA-LN-A4A4         TCGA-LN-A4A5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4A6         TCGA-LN-A4A8         TCGA-LN-A4A9 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A4MQ         TCGA-LN-A4MR         TCGA-LN-A5U5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A5U6         TCGA-LN-A5U7         TCGA-LN-A7HV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A7HW         TCGA-LN-A7HX         TCGA-LN-A7HY 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A7HZ         TCGA-LN-A8HZ         TCGA-LN-A8I0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A8I1         TCGA-LN-A9FO         TCGA-LN-A9FP 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-LN-A9FQ         TCGA-LN-A9FR         TCGA-M9-A5M8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-MX-A5UG         TCGA-MX-A5UJ         TCGA-MX-A663 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-MX-A666         TCGA-Q9-A6FU         TCGA-Q9-A6FW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A7O7         TCGA-R5-A7ZE         TCGA-R5-A7ZF 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A7ZI         TCGA-R5-A7ZR         TCGA-R5-A804 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R5-A805         TCGA-R6-A6DN         TCGA-R6-A6DQ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6KZ         TCGA-R6-A6L4         TCGA-R6-A6L6 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6XG         TCGA-R6-A6XQ         TCGA-R6-A6Y0 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A6Y2         TCGA-R6-A8W5         TCGA-R6-A8W8 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-R6-A8WG         TCGA-RD-A7BS         TCGA-RD-A7BW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A7C1         TCGA-RD-A8MV         TCGA-RD-A8MW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8N0         TCGA-RD-A8N1         TCGA-RD-A8N5 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-RD-A8N6         TCGA-RD-A8N9         TCGA-RE-A7BO 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-S8-A6BV         TCGA-S8-A6BW         TCGA-SW-A7EA 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-SW-A7EB         TCGA-V5-A7RB         TCGA-V5-A7RC 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-V5-A7RE         TCGA-V5-AASW         TCGA-V5-AASX 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8DL         TCGA-VQ-A8DU         TCGA-VQ-A8DV 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8E2         TCGA-VQ-A8E7         TCGA-VQ-A8P2 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8P3         TCGA-VQ-A8PE         TCGA-VQ-A8PK 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A8PM         TCGA-VQ-A8PQ         TCGA-VQ-A91Q 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A91U         TCGA-VQ-A91V         TCGA-VQ-A92D 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-A94T         TCGA-VQ-AA64         TCGA-VQ-AA68 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA69         TCGA-VQ-AA6A         TCGA-VQ-AA6B 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA6F         TCGA-VQ-AA6G         TCGA-VQ-AA6I 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VQ-AA6J         TCGA-VQ-AA6K         TCGA-VR-A8EO 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EP         TCGA-VR-A8EQ         TCGA-VR-A8ER 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8ET         TCGA-VR-A8EU         TCGA-VR-A8EW 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8EX         TCGA-VR-A8EY         TCGA-VR-A8EZ 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-A8Q7         TCGA-VR-AA4D         TCGA-VR-AA4G 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-VR-AA7B         TCGA-VR-AA7D         TCGA-VR-AA7I 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-X8-AAAR         TCGA-XP-A8T6         TCGA-XP-A8T7 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-XP-A8T8         TCGA-Z6-A8JD         TCGA-Z6-A8JE 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-Z6-A9VB         TCGA-Z6-AAPN         TCGA-ZA-A8F6 
"SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" "SLC25A17 WILD-TYPE" 
        TCGA-ZR-A9CJ 
"SLC25A17 WILD-TYPE" 

Clustering(733) Variable = C9ORF41 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF41 MUTATED        1      0      0      6
  C9ORF41 WILD-TYPE    134     92    172    170
D733V1, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF41 MUTATED        5      0      1
  C9ORF41 WILD-TYPE    210    155    161
D733V2, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF41 MUTATED        4      1      1      0
  C9ORF41 WILD-TYPE    131    123    124     60
D733V3, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               1               123
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF41 MUTATED        4      1      1
  C9ORF41 WILD-TYPE    249    101     88
D733V4, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF41 MUTATED        0      4      3
  C9ORF41 WILD-TYPE    164    243    140
D733V5, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               4               243
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF41 MUTATED        0      3      3      0      1
  C9ORF41 WILD-TYPE    121    101     88    121    116
D733V6, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               3               101
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF41 MUTATED        0      4      3
  C9ORF41 WILD-TYPE    159    247    162
D733V7, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               4               247
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF41 MUTATED        0      2      4      0      1
  C9ORF41 WILD-TYPE    118    129    147     94     80
D733V8, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               129
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF41 MUTATED        0      1      3      0      1
  C9ORF41 WILD-TYPE    118    135    112     40     70
D733V9, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF41 MUTATED        0      0      4      1      0
  C9ORF41 WILD-TYPE     48    109    126    100     92
D733V10, multiclass
        clus
vv       C9ORF41 MUTATED C9ORF41 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               4               126
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(734) Variable = EPB41 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPB41 MUTATED        0      0      1     13
  EPB41 WILD-TYPE    135     92    171    163
D734V1, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB41 MUTATED        7      2      2
  EPB41 WILD-TYPE    208    153    160
D734V2, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPB41 MUTATED        6      3      3      0
  EPB41 WILD-TYPE    129    121    122     60
D734V3, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3             121
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB41 MUTATED        7      1      4
  EPB41 WILD-TYPE    246    101     85
D734V4, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB41 MUTATED        1      7      5
  EPB41 WILD-TYPE    163    240    138
D734V5, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41 MUTATED        0      2      6      1      4
  EPB41 WILD-TYPE    121    102     85    120    113
D734V6, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPB41 MUTATED        1     10      3
  EPB41 WILD-TYPE    158    241    162
D734V7, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41 MUTATED        0      4      6      1      3
  EPB41 WILD-TYPE    118    127    145     93     78
D734V8, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41 MUTATED        1      4      2      0      3
  EPB41 WILD-TYPE    117    132    113     40     68
D734V9, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41 MUTATED        0      3      5      1      1
  EPB41 WILD-TYPE     48    106    125    100     91
D734V10, multiclass
        clus
vv       EPB41 MUTATED EPB41 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(735) Variable = DENND2A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DENND2A MUTATED        5      1      3     12
  DENND2A WILD-TYPE    130     91    169    164
D735V1, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               5               130
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND2A MUTATED       14      2      2
  DENND2A WILD-TYPE    201    153    160
D735V2, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1              14               201
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DENND2A MUTATED        5      9      4      1
  DENND2A WILD-TYPE    130    115    121     59
D735V3, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               5               130
  CLUS_2               9               115
  CLUS_3               4               121
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND2A MUTATED        9      7      3
  DENND2A WILD-TYPE    244     95     86
D735V4, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               9               244
  CLUS_2               7                95
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND2A MUTATED        3     16      1
  DENND2A WILD-TYPE    161    231    142
D735V5, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               3               161
  CLUS_2              16               231
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND2A MUTATED        2      4     10      2      2
  DENND2A WILD-TYPE    119    100     81    119    115
D735V6, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               2               119
  CLUS_2               4               100
  CLUS_3              10                81
  CLUS_4               2               119
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DENND2A MUTATED        3     14      4
  DENND2A WILD-TYPE    156    237    161
D735V7, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               3               156
  CLUS_2              14               237
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND2A MUTATED        1     11      5      2      2
  DENND2A WILD-TYPE    117    120    146     92     79
D735V8, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               1               117
  CLUS_2              11               120
  CLUS_3               5               146
  CLUS_4               2                92
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND2A MUTATED        2      6      3      3      4
  DENND2A WILD-TYPE    116    130    112     37     67
D735V9, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               2               116
  CLUS_2               6               130
  CLUS_3               3               112
  CLUS_4               3                37
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DENND2A MUTATED        0      7      8      1      2
  DENND2A WILD-TYPE     48    102    122    100     90
D735V10, multiclass
        clus
vv       DENND2A MUTATED DENND2A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               7               102
  CLUS_3               8               122
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(736) Variable = SLC45A4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC45A4 MUTATED        6      0      1     16
  SLC45A4 WILD-TYPE    129     92    171    160
D736V1, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4              16               160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC45A4 MUTATED       16      1      4
  SLC45A4 WILD-TYPE    199    154    158
D736V2, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1              16               199
  CLUS_2               1               154
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC45A4 MUTATED        9      9      1      1
  SLC45A4 WILD-TYPE    126    115    124     59
D736V3, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               9               115
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC45A4 MUTATED       14      5      1
  SLC45A4 WILD-TYPE    239     97     88
D736V4, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1              14               239
  CLUS_2               5                97
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC45A4 MUTATED        5     13      5
  SLC45A4 WILD-TYPE    159    234    138
D736V5, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               5               159
  CLUS_2              13               234
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC45A4 MUTATED        2      4     11      1      5
  SLC45A4 WILD-TYPE    119    100     80    120    112
D736V6, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               4               100
  CLUS_3              11                80
  CLUS_4               1               120
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC45A4 MUTATED        3     14      7
  SLC45A4 WILD-TYPE    156    237    158
D736V7, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              14               237
  CLUS_3               7               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC45A4 MUTATED        2      9     10      0      3
  SLC45A4 WILD-TYPE    116    122    141     94     78
D736V8, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               9               122
  CLUS_3              10               141
  CLUS_4               0                94
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC45A4 MUTATED        0      8      2      0      9
  SLC45A4 WILD-TYPE    118    128    113     40     62
D736V9, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               8               128
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               9                62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC45A4 MUTATED        1      5      9      4      0
  SLC45A4 WILD-TYPE     47    104    121     97     92
D736V10, multiclass
        clus
vv       SLC45A4 MUTATED SLC45A4 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               9               121
  CLUS_4               4                97
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(737) Variable = ALDH3A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALDH3A1 MUTATED        2      2      1      9
  ALDH3A1 WILD-TYPE    133     90    171    167
D737V1, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ALDH3A1 MUTATED        8      0      2
  ALDH3A1 WILD-TYPE    207    155    160
D737V2, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALDH3A1 MUTATED        4      8      1      1
  ALDH3A1 WILD-TYPE    131    116    124     59
D737V3, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               8               116
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ALDH3A1 MUTATED        6      7      1
  ALDH3A1 WILD-TYPE    247     95     88
D737V4, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               7                95
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ALDH3A1 MUTATED        1     11      2
  ALDH3A1 WILD-TYPE    163    236    141
D737V5, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               1               163
  CLUS_2              11               236
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH3A1 MUTATED        1      1      8      2      2
  ALDH3A1 WILD-TYPE    120    103     83    119    115
D737V6, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               8                83
  CLUS_4               2               119
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ALDH3A1 MUTATED        0     11      3
  ALDH3A1 WILD-TYPE    159    240    162
D737V7, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              11               240
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH3A1 MUTATED        2      4      8      0      0
  ALDH3A1 WILD-TYPE    116    127    143     94     81
D737V8, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               127
  CLUS_3               8               143
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH3A1 MUTATED        0      5      0      1      3
  ALDH3A1 WILD-TYPE    118    131    115     39     68
D737V9, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALDH3A1 MUTATED        0      4      5      0      0
  ALDH3A1 WILD-TYPE     48    105    125    101     92
D737V10, multiclass
        clus
vv       ALDH3A1 MUTATED ALDH3A1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               5               125
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(738) Variable = PAXIP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAXIP1 MUTATED        1      4      4      8
  PAXIP1 WILD-TYPE    134     88    168    168
D738V1, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              4               88
  CLUS_3              4              168
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAXIP1 MUTATED        7      7      1
  PAXIP1 WILD-TYPE    208    148    161
D738V2, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              7              148
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAXIP1 MUTATED        7      2      0      3
  PAXIP1 WILD-TYPE    128    122    125     57
D738V3, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAXIP1 MUTATED        9      3      0
  PAXIP1 WILD-TYPE    244     99     89
D738V4, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAXIP1 MUTATED        9      6      2
  PAXIP1 WILD-TYPE    155    241    141
D738V5, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              9              155
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAXIP1 MUTATED        3      3      4      6      1
  PAXIP1 WILD-TYPE    118    101     87    115    116
D738V6, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              6              115
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAXIP1 MUTATED        8      8      1
  PAXIP1 WILD-TYPE    151    243    164
D738V7, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              8              151
  CLUS_2              8              243
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAXIP1 MUTATED        1      6      4      6      0
  PAXIP1 WILD-TYPE    117    125    147     88     81
D738V8, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              6               88
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAXIP1 MUTATED        7      3      1      1      3
  PAXIP1 WILD-TYPE    111    133    114     39     68
D738V9, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAXIP1 MUTATED        0      5      4      0      6
  PAXIP1 WILD-TYPE     48    104    126    101     86
D738V10, multiclass
        clus
vv       PAXIP1 MUTATED PAXIP1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(739) Variable = PCCA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCCA MUTATED        2      3      0     10
  PCCA WILD-TYPE    133     89    172    166
D739V1, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3             89
  CLUS_3            0            172
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCCA MUTATED        8      3      2
  PCCA WILD-TYPE    207    152    160
D739V2, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCCA MUTATED        4      5      2      2
  PCCA WILD-TYPE    131    119    123     58
D739V3, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5            119
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCCA MUTATED        8      5      0
  PCCA WILD-TYPE    245     97     89
D739V4, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            8            245
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCCA MUTATED        4      6      3
  PCCA WILD-TYPE    160    241    140
D739V5, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            4            160
  CLUS_2            6            241
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCCA MUTATED        1      3      5      3      1
  PCCA WILD-TYPE    120    101     86    118    116
D739V6, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            3            118
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCCA MUTATED        2     11      2
  PCCA WILD-TYPE    157    240    163
D739V7, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            2            157
  CLUS_2           11            240
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCCA MUTATED        1      3      8      3      0
  PCCA WILD-TYPE    117    128    143     91     81
D739V8, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            8            143
  CLUS_4            3             91
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCCA MUTATED        2      3      1      2      5
  PCCA WILD-TYPE    116    133    114     38     66
D739V9, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCCA MUTATED        1      3      6      0      3
  PCCA WILD-TYPE     47    106    124    101     89
D739V10, multiclass
        clus
vv       PCCA MUTATED PCCA WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            0            101
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(740) Variable = WDR11 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR11 MUTATED        3      1      0      8
  WDR11 WILD-TYPE    132     91    172    168
D740V1, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR11 MUTATED        8      0      4
  WDR11 WILD-TYPE    207    155    158
D740V2, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WDR11 MUTATED        1      8      0      2
  WDR11 WILD-TYPE    134    116    125     58
D740V3, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR11 MUTATED        4      7      0
  WDR11 WILD-TYPE    249     95     89
D740V4, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             7              95
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR11 MUTATED        0      9      3
  WDR11 WILD-TYPE    164    238    140
D740V5, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR11 MUTATED        3      4      5      0      0
  WDR11 WILD-TYPE    118    100     86    121    117
D740V6, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  WDR11 MUTATED        0      9      3
  WDR11 WILD-TYPE    159    242    162
D740V7, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR11 MUTATED        1      3      8      0      0
  WDR11 WILD-TYPE    117    128    143     94     81
D740V8, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR11 MUTATED        0      4      3      0      4
  WDR11 WILD-TYPE    118    132    112     40     67
D740V9, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WDR11 MUTATED        1      3      6      1      0
  WDR11 WILD-TYPE     47    106    124    100     92
D740V10, multiclass
        clus
vv       WDR11 MUTATED WDR11 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(741) Variable = PSMC3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSMC3 MUTATED        0      1      1      8
  PSMC3 WILD-TYPE    135     91    171    168
D741V1, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC3 MUTATED        5      1      1
  PSMC3 WILD-TYPE    210    154    161
D741V2, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSMC3 MUTATED        3      3      1      2
  PSMC3 WILD-TYPE    132    121    124     58
D741V3, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC3 MUTATED        6      2      1
  PSMC3 WILD-TYPE    247    100     88
D741V4, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC3 MUTATED        1      6      3
  PSMC3 WILD-TYPE    163    241    140
D741V5, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC3 MUTATED        2      4      2      1      1
  PSMC3 WILD-TYPE    119    100     89    120    116
D741V6, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC3 MUTATED        1      8      1
  PSMC3 WILD-TYPE    158    243    164
D741V7, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC3 MUTATED        0      2      6      1      1
  PSMC3 WILD-TYPE    118    129    145     93     80
D741V8, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC3 MUTATED        1      2      0      0      3
  PSMC3 WILD-TYPE    117    134    115     40     68
D741V9, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC3 MUTATED        1      1      3      0      1
  PSMC3 WILD-TYPE     47    108    127    101     91
D741V10, multiclass
        clus
vv       PSMC3 MUTATED PSMC3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(742) Variable = STEAP2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STEAP2 MUTATED        1      1      1      4
  STEAP2 WILD-TYPE    134     91    171    172
D742V1, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  STEAP2 MUTATED        6      0      0
  STEAP2 WILD-TYPE    209    155    162
D742V2, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STEAP2 MUTATED        3      3      0      0
  STEAP2 WILD-TYPE    132    121    125     60
D742V3, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  STEAP2 MUTATED        5      1      0
  STEAP2 WILD-TYPE    248    101     89
D742V4, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  STEAP2 MUTATED        1      6      0
  STEAP2 WILD-TYPE    163    241    143
D742V5, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STEAP2 MUTATED        0      2      5      0      0
  STEAP2 WILD-TYPE    121    102     86    121    117
D742V6, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  STEAP2 MUTATED        1      5      1
  STEAP2 WILD-TYPE    158    246    164
D742V7, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STEAP2 MUTATED        0      4      3      0      0
  STEAP2 WILD-TYPE    118    127    148     94     81
D742V8, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STEAP2 MUTATED        0      2      1      0      2
  STEAP2 WILD-TYPE    118    134    114     40     69
D742V9, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STEAP2 MUTATED        0      2      3      0      0
  STEAP2 WILD-TYPE     48    107    127    101     92
D742V10, multiclass
        clus
vv       STEAP2 MUTATED STEAP2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(743) Variable = CUL1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUL1 MUTATED        1      2      4     17
  CUL1 WILD-TYPE    134     90    168    159
D743V1, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            4            168
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL1 MUTATED       16      4      1
  CUL1 WILD-TYPE    199    151    161
D743V2, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1           16            199
  CLUS_2            4            151
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUL1 MUTATED        6      7      3      1
  CUL1 WILD-TYPE    129    117    122     59
D743V3, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            7            117
  CLUS_3            3            122
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL1 MUTATED        9      7      1
  CUL1 WILD-TYPE    244     95     88
D743V4, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            7             95
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL1 MUTATED        2     17      3
  CUL1 WILD-TYPE    162    230    140
D743V5, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2           17            230
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL1 MUTATED        1      8     10      1      2
  CUL1 WILD-TYPE    120     96     81    120    115
D743V6, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            8             96
  CLUS_3           10             81
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL1 MUTATED        2     20      2
  CUL1 WILD-TYPE    157    231    163
D743V7, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2           20            231
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL1 MUTATED        3      9      9      1      2
  CUL1 WILD-TYPE    115    122    142     93     79
D743V8, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            9            122
  CLUS_3            9            142
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL1 MUTATED        2     10      2      1      6
  CUL1 WILD-TYPE    116    126    113     39     65
D743V9, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           10            126
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL1 MUTATED        0      9      8      3      1
  CUL1 WILD-TYPE     48    100    122     98     91
D743V10, multiclass
        clus
vv       CUL1 MUTATED CUL1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            9            100
  CLUS_3            8            122
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(744) Variable = TH1L MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TH1L MUTATED        1      2      2      9
  TH1L WILD-TYPE    134     90    170    167
D744V1, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TH1L MUTATED        7      2      3
  TH1L WILD-TYPE    208    153    159
D744V2, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            7            208
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TH1L MUTATED        3      5      0      1
  TH1L WILD-TYPE    132    119    125     59
D744V3, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            3            132
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TH1L MUTATED        6      3      0
  TH1L WILD-TYPE    247     99     89
D744V4, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            6            247
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TH1L MUTATED        3      7      3
  TH1L WILD-TYPE    161    240    140
D744V5, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TH1L MUTATED        0      3      4      1      5
  TH1L WILD-TYPE    121    101     87    120    112
D744V6, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TH1L MUTATED        2     10      2
  TH1L WILD-TYPE    157    241    163
D744V7, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            2            157
  CLUS_2           10            241
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TH1L MUTATED        2      6      6      0      0
  TH1L WILD-TYPE    116    125    145     94     81
D744V8, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            6            145
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TH1L MUTATED        2      4      0      1      2
  TH1L WILD-TYPE    116    132    115     39     69
D744V9, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TH1L MUTATED        1      5      3      0      0
  TH1L WILD-TYPE     47    104    127    101     92
D744V10, multiclass
        clus
vv       TH1L MUTATED TH1L WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(745) Variable = FARSA MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FARSA MUTATED        0      1      2      5
  FARSA WILD-TYPE    135     91    170    171
D745V1, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FARSA MUTATED        5      1      1
  FARSA WILD-TYPE    210    154    161
D745V2, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FARSA MUTATED        2      3      1      0
  FARSA WILD-TYPE    133    121    124     60
D745V3, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FARSA MUTATED        2      3      1
  FARSA WILD-TYPE    251     99     88
D745V4, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             2             251
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FARSA MUTATED        1      3      4
  FARSA WILD-TYPE    163    244    139
D745V5, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FARSA MUTATED        0      0      3      1      4
  FARSA WILD-TYPE    121    104     88    120    113
D745V6, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FARSA MUTATED        2      6      0
  FARSA WILD-TYPE    157    245    165
D745V7, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             2             157
  CLUS_2             6             245
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FARSA MUTATED        1      2      4      1      0
  FARSA WILD-TYPE    117    129    147     93     81
D745V8, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FARSA MUTATED        1      2      0      1      3
  FARSA WILD-TYPE    117    134    115     39     68
D745V9, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FARSA MUTATED        0      2      3      1      1
  FARSA WILD-TYPE     48    107    127    100     91
D745V10, multiclass
        clus
vv       FARSA MUTATED FARSA WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(746) Variable = EDNRB MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EDNRB MUTATED        6      4      5     16
  EDNRB WILD-TYPE    129     88    167    160
D746V1, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4              88
  CLUS_3             5             167
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EDNRB MUTATED       18      3      1
  EDNRB WILD-TYPE    197    152    161
D746V2, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1            18             197
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EDNRB MUTATED       13      8      2      6
  EDNRB WILD-TYPE    122    116    123     54
D746V3, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1            13             122
  CLUS_2             8             116
  CLUS_3             2             123
  CLUS_4             6              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EDNRB MUTATED       27      1      1
  EDNRB WILD-TYPE    226    101     88
D746V4, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1            27             226
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EDNRB MUTATED        2     24      4
  EDNRB WILD-TYPE    162    223    139
D746V5, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             2             162
  CLUS_2            24             223
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EDNRB MUTATED        5     11     10      0      4
  EDNRB WILD-TYPE    116     93     81    121    113
D746V6, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             5             116
  CLUS_2            11              93
  CLUS_3            10              81
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EDNRB MUTATED        4     23      4
  EDNRB WILD-TYPE    155    228    161
D746V7, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             4             155
  CLUS_2            23             228
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EDNRB MUTATED        7     13     10      0      1
  EDNRB WILD-TYPE    111    118    141     94     80
D746V8, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             7             111
  CLUS_2            13             118
  CLUS_3            10             141
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EDNRB MUTATED        1     10      2      1      7
  EDNRB WILD-TYPE    117    126    113     39     64
D746V9, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             1             117
  CLUS_2            10             126
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EDNRB MUTATED        0     10      8      3      0
  EDNRB WILD-TYPE     48     99    122     98     92
D746V10, multiclass
        clus
vv       EDNRB MUTATED EDNRB WILD-TYPE
  CLUS_1             0              48
  CLUS_2            10              99
  CLUS_3             8             122
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(747) Variable = SMAD7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAD7 MUTATED        2      0      0      5
  SMAD7 WILD-TYPE    133     92    172    171
D747V1, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD7 MUTATED        4      1      0
  SMAD7 WILD-TYPE    211    154    162
D747V2, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAD7 MUTATED        2      3      1      0
  SMAD7 WILD-TYPE    133    121    124     60
D747V3, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD7 MUTATED        2      3      1
  SMAD7 WILD-TYPE    251     99     88
D747V4, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD7 MUTATED        1      3      3
  SMAD7 WILD-TYPE    163    244    140
D747V5, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD7 MUTATED        1      1      3      0      2
  SMAD7 WILD-TYPE    120    103     88    121    115
D747V6, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD7 MUTATED        1      4      2
  SMAD7 WILD-TYPE    158    247    163
D747V7, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD7 MUTATED        1      2      4      0      0
  SMAD7 WILD-TYPE    117    129    147     94     81
D747V8, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD7 MUTATED        1      2      0      1      1
  SMAD7 WILD-TYPE    117    134    115     39     70
D747V9, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD7 MUTATED        0      3      2      0      0
  SMAD7 WILD-TYPE     48    106    128    101     92
D747V10, multiclass
        clus
vv       SMAD7 MUTATED SMAD7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(748) Variable = PABPC4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PABPC4 MUTATED        2      1      1      7
  PABPC4 WILD-TYPE    133     91    171    169
D748V1, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PABPC4 MUTATED        6      1      2
  PABPC4 WILD-TYPE    209    154    160
D748V2, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PABPC4 MUTATED        2      5      1      2
  PABPC4 WILD-TYPE    133    119    124     58
D748V3, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PABPC4 MUTATED        8      1      1
  PABPC4 WILD-TYPE    245    101     88
D748V4, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PABPC4 MUTATED        1      7      2
  PABPC4 WILD-TYPE    163    240    141
D748V5, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PABPC4 MUTATED        1      2      3      1      3
  PABPC4 WILD-TYPE    120    102     88    120    114
D748V6, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PABPC4 MUTATED        2      8      1
  PABPC4 WILD-TYPE    157    243    164
D748V7, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PABPC4 MUTATED        1      5      4      1      0
  PABPC4 WILD-TYPE    117    126    147     93     81
D748V8, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PABPC4 MUTATED        1      5      0      0      2
  PABPC4 WILD-TYPE    117    131    115     40     69
D748V9, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PABPC4 MUTATED        0      4      3      0      1
  PABPC4 WILD-TYPE     48    105    127    101     91
D748V10, multiclass
        clus
vv       PABPC4 MUTATED PABPC4 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(749) Variable = SLC16A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC16A1 MUTATED        2      0      3      4
  SLC16A1 WILD-TYPE    133     92    169    172
D749V1, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC16A1 MUTATED        5      3      1
  SLC16A1 WILD-TYPE    210    152    161
D749V2, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               3               152
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC16A1 MUTATED        2      2      1      2
  SLC16A1 WILD-TYPE    133    122    124     58
D749V3, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC16A1 MUTATED        4      2      1
  SLC16A1 WILD-TYPE    249    100     88
D749V4, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC16A1 MUTATED        3      6      1
  SLC16A1 WILD-TYPE    161    241    142
D749V5, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC16A1 MUTATED        1      2      4      2      1
  SLC16A1 WILD-TYPE    120    102     87    119    116
D749V6, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               4                87
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC16A1 MUTATED        3      6      1
  SLC16A1 WILD-TYPE    156    245    164
D749V7, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               6               245
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC16A1 MUTATED        2      5      1      2      0
  SLC16A1 WILD-TYPE    116    126    150     92     81
D749V8, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               1               150
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC16A1 MUTATED        3      5      0      0      1
  SLC16A1 WILD-TYPE    115    131    115     40     70
D749V9, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               5               131
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC16A1 MUTATED        0      5      2      0      2
  SLC16A1 WILD-TYPE     48    104    128    101     90
D749V10, multiclass
        clus
vv       SLC16A1 MUTATED SLC16A1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(750) Variable = KIAA1539 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1539 MUTATED        2      0      4      8
  KIAA1539 WILD-TYPE    133     92    168    168
D750V1, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                4                168
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1539 MUTATED        9      2      2
  KIAA1539 WILD-TYPE    206    153    160
D750V2, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                2                153
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1539 MUTATED        3      4      3      1
  KIAA1539 WILD-TYPE    132    120    122     59
D750V3, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                4                120
  CLUS_3                3                122
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1539 MUTATED        6      3      2
  KIAA1539 WILD-TYPE    247     99     87
D750V4, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                6                247
  CLUS_2                3                 99
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1539 MUTATED        3     10      1
  KIAA1539 WILD-TYPE    161    237    142
D750V5, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               10                237
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1539 MUTATED        1      2      7      2      2
  KIAA1539 WILD-TYPE    120    102     84    119    115
D750V6, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                7                 84
  CLUS_4                2                119
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1539 MUTATED        4      8      2
  KIAA1539 WILD-TYPE    155    243    163
D750V7, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                4                155
  CLUS_2                8                243
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1539 MUTATED        0      7      4      2      1
  KIAA1539 WILD-TYPE    118    124    147     92     80
D750V8, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                7                124
  CLUS_3                4                147
  CLUS_4                2                 92
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1539 MUTATED        1      5      2      2      2
  KIAA1539 WILD-TYPE    117    131    113     38     69
D750V9, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                131
  CLUS_3                2                113
  CLUS_4                2                 38
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1539 MUTATED        1      6      3      1      1
  KIAA1539 WILD-TYPE     47    103    127    100     91
D750V10, multiclass
        clus
vv       KIAA1539 MUTATED KIAA1539 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                6                103
  CLUS_3                3                127
  CLUS_4                1                100
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(751) Variable = DNAJB13 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAJB13 MUTATED        0      0      1      5
  DNAJB13 WILD-TYPE    135     92    171    171
D751V1, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DNAJB13 MUTATED        4      1      0
  DNAJB13 WILD-TYPE    211    154    162
D751V2, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAJB13 MUTATED        3      3      0      0
  DNAJB13 WILD-TYPE    132    121    125     60
D751V3, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DNAJB13 MUTATED        4      1      1
  DNAJB13 WILD-TYPE    249    101     88
D751V4, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DNAJB13 MUTATED        1      2      2
  DNAJB13 WILD-TYPE    163    245    141
D751V5, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJB13 MUTATED        1      0      3      0      1
  DNAJB13 WILD-TYPE    120    104     88    121    116
D751V6, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DNAJB13 MUTATED        1      4      1
  DNAJB13 WILD-TYPE    158    247    164
D751V7, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               4               247
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJB13 MUTATED        2      2      2      0      0
  DNAJB13 WILD-TYPE    116    129    149     94     81
D751V8, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               129
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJB13 MUTATED        0      2      1      0      2
  DNAJB13 WILD-TYPE    118    134    114     40     69
D751V9, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJB13 MUTATED        0      2      2      1      0
  DNAJB13 WILD-TYPE     48    107    128    100     92
D751V10, multiclass
        clus
vv       DNAJB13 MUTATED DNAJB13 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(752) Variable = ZCCHC11 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCCHC11 MUTATED        0      1      4     19
  ZCCHC11 WILD-TYPE    135     91    168    157
D752V1, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               4               168
  CLUS_4              19               157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZCCHC11 MUTATED       13      3      3
  ZCCHC11 WILD-TYPE    202    152    159
D752V2, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1              13               202
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCCHC11 MUTATED        6      7      6      0
  ZCCHC11 WILD-TYPE    129    117    119     60
D752V3, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               7               117
  CLUS_3               6               119
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZCCHC11 MUTATED       10      3      6
  ZCCHC11 WILD-TYPE    243     99     83
D752V4, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1              10               243
  CLUS_2               3                99
  CLUS_3               6                83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZCCHC11 MUTATED        5     11      7
  ZCCHC11 WILD-TYPE    159    236    136
D752V5, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               5               159
  CLUS_2              11               236
  CLUS_3               7               136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC11 MUTATED        1      3     11      4      4
  ZCCHC11 WILD-TYPE    120    101     80    117    113
D752V6, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3              11                80
  CLUS_4               4               117
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZCCHC11 MUTATED        2     15      7
  ZCCHC11 WILD-TYPE    157    236    158
D752V7, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              15               236
  CLUS_3               7               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC11 MUTATED        1      8      7      4      4
  ZCCHC11 WILD-TYPE    117    123    144     90     77
D752V8, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               8               123
  CLUS_3               7               144
  CLUS_4               4                90
  CLUS_5               4                77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC11 MUTATED        1      6      5      3      3
  ZCCHC11 WILD-TYPE    117    130    110     37     68
D752V9, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               130
  CLUS_3               5               110
  CLUS_4               3                37
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC11 MUTATED        1      4      8      1      4
  ZCCHC11 WILD-TYPE     47    105    122    100     88
D752V10, multiclass
        clus
vv       ZCCHC11 MUTATED ZCCHC11 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               8               122
  CLUS_4               1               100
  CLUS_5               4                88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(753) Variable = DDX60 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX60 MUTATED        3      2      2     16
  DDX60 WILD-TYPE    132     90    170    160
D753V1, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX60 MUTATED       15      3      3
  DDX60 WILD-TYPE    200    152    159
D753V2, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDX60 MUTATED        5      8      2      3
  DDX60 WILD-TYPE    130    116    123     57
D753V3, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             8             116
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX60 MUTATED       11      7      0
  DDX60 WILD-TYPE    242     95     89
D753V4, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             7              95
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX60 MUTATED        3     15      4
  DDX60 WILD-TYPE    161    232    139
D753V5, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            15             232
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX60 MUTATED        3      5      8      2      4
  DDX60 WILD-TYPE    118     99     83    119    113
D753V6, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDX60 MUTATED        3     16      4
  DDX60 WILD-TYPE    156    235    161
D753V7, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            16             235
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX60 MUTATED        1     12      7      2      1
  DDX60 WILD-TYPE    117    119    144     92     80
D753V8, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            12             119
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX60 MUTATED        1      8      2      2      4
  DDX60 WILD-TYPE    117    128    113     38     67
D753V9, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDX60 MUTATED        1      8      5      1      2
  DDX60 WILD-TYPE     47    101    125    100     90
D753V10, multiclass
        clus
vv       DDX60 MUTATED DDX60 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             8             101
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(754) Variable = SCN10A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCN10A MUTATED       12      2     10     23
  SCN10A WILD-TYPE    123     90    162    153
D754V1, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1             12              123
  CLUS_2              2               90
  CLUS_3             10              162
  CLUS_4             23              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCN10A MUTATED       25      9      9
  SCN10A WILD-TYPE    190    146    153
D754V2, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1             25              190
  CLUS_2              9              146
  CLUS_3              9              153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCN10A MUTATED       13     17      8      2
  SCN10A WILD-TYPE    122    107    117     58
D754V3, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1             13              122
  CLUS_2             17              107
  CLUS_3              8              117
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCN10A MUTATED       21     11      8
  SCN10A WILD-TYPE    232     91     81
D754V4, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1             21              232
  CLUS_2             11               91
  CLUS_3              8               81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCN10A MUTATED        8     22     15
  SCN10A WILD-TYPE    156    225    128
D754V5, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1              8              156
  CLUS_2             22              225
  CLUS_3             15              128
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN10A MUTATED       10     10     12      5      8
  SCN10A WILD-TYPE    111     94     79    116    109
D754V6, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1             10              111
  CLUS_2             10               94
  CLUS_3             12               79
  CLUS_4              5              116
  CLUS_5              8              109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCN10A MUTATED        5     28     14
  SCN10A WILD-TYPE    154    223    151
D754V7, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1              5              154
  CLUS_2             28              223
  CLUS_3             14              151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN10A MUTATED        6     15     18      2      6
  SCN10A WILD-TYPE    112    116    133     92     75
D754V8, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1              6              112
  CLUS_2             15              116
  CLUS_3             18              133
  CLUS_4              2               92
  CLUS_5              6               75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN10A MUTATED        5     15      5      3      9
  SCN10A WILD-TYPE    113    121    110     37     62
D754V9, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1              5              113
  CLUS_2             15              121
  CLUS_3              5              110
  CLUS_4              3               37
  CLUS_5              9               62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN10A MUTATED        4     12     14      5      2
  SCN10A WILD-TYPE     44     97    116     96     90
D754V10, multiclass
        clus
vv       SCN10A MUTATED SCN10A WILD-TYPE
  CLUS_1              4               44
  CLUS_2             12               97
  CLUS_3             14              116
  CLUS_4              5               96
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(755) Variable = BRDT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRDT MUTATED        3      0      4      7
  BRDT WILD-TYPE    132     92    168    169
D755V1, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRDT MUTATED        8      2      3
  BRDT WILD-TYPE    207    153    159
D755V2, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRDT MUTATED        6      0      3      1
  BRDT WILD-TYPE    129    124    122     59
D755V3, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            6            129
  CLUS_2            0            124
  CLUS_3            3            122
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRDT MUTATED        8      0      2
  BRDT WILD-TYPE    245    102     87
D755V4, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            8            245
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRDT MUTATED        3      6      5
  BRDT WILD-TYPE    161    241    138
D755V5, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            3            161
  CLUS_2            6            241
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRDT MUTATED        3      4      3      2      2
  BRDT WILD-TYPE    118    100     88    119    115
D755V6, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            3            118
  CLUS_2            4            100
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRDT MUTATED        2      7      5
  BRDT WILD-TYPE    157    244    160
D755V7, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            2            157
  CLUS_2            7            244
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRDT MUTATED        2      3      5      2      2
  BRDT WILD-TYPE    116    128    146     92     79
D755V8, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRDT MUTATED        1      2      6      1      3
  BRDT WILD-TYPE    117    134    109     39     68
D755V9, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            6            109
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRDT MUTATED        1      2      4      4      2
  BRDT WILD-TYPE     47    107    126     97     90
D755V10, multiclass
        clus
vv       BRDT MUTATED BRDT WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            4            126
  CLUS_4            4             97
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(756) Variable = CCAR1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCAR1 MUTATED        4      1      5     12
  CCAR1 WILD-TYPE    131     91    167    164
D756V1, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             5             167
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCAR1 MUTATED       14      2      5
  CCAR1 WILD-TYPE    201    153    157
D756V2, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             2             153
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCAR1 MUTATED        7      4      5      1
  CCAR1 WILD-TYPE    128    120    120     59
D756V3, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             4             120
  CLUS_3             5             120
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCAR1 MUTATED       12      1      4
  CCAR1 WILD-TYPE    241    101     85
D756V4, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             1             101
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCAR1 MUTATED        3     13      6
  CCAR1 WILD-TYPE    161    234    137
D756V5, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            13             234
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCAR1 MUTATED        3      5      8      1      5
  CCAR1 WILD-TYPE    118     99     83    120    112
D756V6, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCAR1 MUTATED        1     14      7
  CCAR1 WILD-TYPE    158    237    158
D756V7, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            14             237
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCAR1 MUTATED        3      8      8      0      3
  CCAR1 WILD-TYPE    115    123    143     94     78
D756V8, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             123
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCAR1 MUTATED        1      8      5      1      3
  CCAR1 WILD-TYPE    117    128    110     39     68
D756V9, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             5             110
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCAR1 MUTATED        2      5      8      3      0
  CCAR1 WILD-TYPE     46    104    122     98     92
D756V10, multiclass
        clus
vv       CCAR1 MUTATED CCAR1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             8             122
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(757) Variable = MCCC2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCCC2 MUTATED        2      1      0      6
  MCCC2 WILD-TYPE    133     91    172    170
D757V1, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCCC2 MUTATED        6      2      1
  MCCC2 WILD-TYPE    209    153    161
D757V2, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCCC2 MUTATED        2      4      0      0
  MCCC2 WILD-TYPE    133    120    125     60
D757V3, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCCC2 MUTATED        3      3      0
  MCCC2 WILD-TYPE    250     99     89
D757V4, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCCC2 MUTATED        5      4      0
  MCCC2 WILD-TYPE    159    243    143
D757V5, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             4             243
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCCC2 MUTATED        2      1      4      1      1
  MCCC2 WILD-TYPE    119    103     87    120    116
D757V6, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCCC2 MUTATED        3      4      2
  MCCC2 WILD-TYPE    156    247    163
D757V7, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCCC2 MUTATED        2      4      2      1      0
  MCCC2 WILD-TYPE    116    127    149     93     81
D757V8, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCCC2 MUTATED        2      3      1      2      1
  MCCC2 WILD-TYPE    116    133    114     38     70
D757V9, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCCC2 MUTATED        3      1      4      0      1
  MCCC2 WILD-TYPE     45    108    126    101     91
D757V10, multiclass
        clus
vv       MCCC2 MUTATED MCCC2 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(758) Variable = AKAP13 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AKAP13 MUTATED       13      4      8     19
  AKAP13 WILD-TYPE    122     88    164    157
D758V1, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1             13              122
  CLUS_2              4               88
  CLUS_3              8              164
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP13 MUTATED       23      9      4
  AKAP13 WILD-TYPE    192    146    158
D758V2, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1             23              192
  CLUS_2              9              146
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AKAP13 MUTATED       15     11      7      3
  AKAP13 WILD-TYPE    120    113    118     57
D758V3, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1             15              120
  CLUS_2             11              113
  CLUS_3              7              118
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP13 MUTATED       24      7      5
  AKAP13 WILD-TYPE    229     95     84
D758V4, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1             24              229
  CLUS_2              7               95
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP13 MUTATED       14     24      4
  AKAP13 WILD-TYPE    150    223    139
D758V5, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1             14              150
  CLUS_2             24              223
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP13 MUTATED        7      8     13     10      4
  AKAP13 WILD-TYPE    114     96     78    111    113
D758V6, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1              7              114
  CLUS_2              8               96
  CLUS_3             13               78
  CLUS_4             10              111
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AKAP13 MUTATED       10     25      9
  AKAP13 WILD-TYPE    149    226    156
D758V7, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1             10              149
  CLUS_2             25              226
  CLUS_3              9              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP13 MUTATED        7     17     14      5      1
  AKAP13 WILD-TYPE    111    114    137     89     80
D758V8, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1              7              111
  CLUS_2             17              114
  CLUS_3             14              137
  CLUS_4              5               89
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP13 MUTATED        8     13      3      3      6
  AKAP13 WILD-TYPE    110    123    112     37     65
D758V9, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1              8              110
  CLUS_2             13              123
  CLUS_3              3              112
  CLUS_4              3               37
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AKAP13 MUTATED        3     12     11      2      5
  AKAP13 WILD-TYPE     45     97    119     99     87
D758V10, multiclass
        clus
vv       AKAP13 MUTATED AKAP13 WILD-TYPE
  CLUS_1              3               45
  CLUS_2             12               97
  CLUS_3             11              119
  CLUS_4              2               99
  CLUS_5              5               87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(759) Variable = CEP250 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP250 MUTATED        4      3      6     15
  CEP250 WILD-TYPE    131     89    166    161
D759V1, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              3               89
  CLUS_3              6              166
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP250 MUTATED       13      7      2
  CEP250 WILD-TYPE    202    148    160
D759V2, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1             13              202
  CLUS_2              7              148
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP250 MUTATED       16      9      1      0
  CEP250 WILD-TYPE    119    115    124     60
D759V3, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1             16              119
  CLUS_2              9              115
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP250 MUTATED       22      3      1
  CEP250 WILD-TYPE    231     99     88
D759V4, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1             22              231
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP250 MUTATED        6     17      4
  CEP250 WILD-TYPE    158    230    139
D759V5, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             17              230
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP250 MUTATED        2      6     13      5      1
  CEP250 WILD-TYPE    119     98     78    116    116
D759V6, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              6               98
  CLUS_3             13               78
  CLUS_4              5              116
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP250 MUTATED        6     18      4
  CEP250 WILD-TYPE    153    233    161
D759V7, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              6              153
  CLUS_2             18              233
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP250 MUTATED        2     13      8      4      1
  CEP250 WILD-TYPE    116    118    143     90     80
D759V8, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             13              118
  CLUS_3              8              143
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP250 MUTATED        5      8      4      2      1
  CEP250 WILD-TYPE    113    128    111     38     70
D759V9, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              8              128
  CLUS_3              4              111
  CLUS_4              2               38
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP250 MUTATED        3      7      5      1      4
  CEP250 WILD-TYPE     45    102    125    100     88
D759V10, multiclass
        clus
vv       CEP250 MUTATED CEP250 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              7              102
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(760) Variable = AGAP5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGAP5 MUTATED        2      0      0      5
  AGAP5 WILD-TYPE    133     92    172    171
D760V1, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP5 MUTATED        6      0      1
  AGAP5 WILD-TYPE    209    155    161
D760V2, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGAP5 MUTATED        2      1      1      1
  AGAP5 WILD-TYPE    133    123    124     59
D760V3, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP5 MUTATED        2      2      1
  AGAP5 WILD-TYPE    251    100     88
D760V4, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP5 MUTATED        1      6      1
  AGAP5 WILD-TYPE    163    241    142
D760V5, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP5 MUTATED        0      2      5      0      1
  AGAP5 WILD-TYPE    121    102     86    121    116
D760V6, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AGAP5 MUTATED        0      7      1
  AGAP5 WILD-TYPE    159    244    164
D760V7, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP5 MUTATED        0      5      2      0      1
  AGAP5 WILD-TYPE    118    126    149     94     80
D760V8, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP5 MUTATED        0      4      1      1      1
  AGAP5 WILD-TYPE    118    132    114     39     70
D760V9, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGAP5 MUTATED        1      4      2      0      0
  AGAP5 WILD-TYPE     47    105    128    101     92
D760V10, multiclass
        clus
vv       AGAP5 MUTATED AGAP5 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(761) Variable = SCLY MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCLY MUTATED        2      0      0      4
  SCLY WILD-TYPE    133     92    172    172
D761V1, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCLY MUTATED        6      0      0
  SCLY WILD-TYPE    209    155    162
D761V2, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            6            209
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCLY MUTATED        3      1      0      0
  SCLY WILD-TYPE    132    123    125     60
D761V3, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCLY MUTATED        3      1      0
  SCLY WILD-TYPE    250    101     89
D761V4, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCLY MUTATED        0      6      0
  SCLY WILD-TYPE    164    241    143
D761V5, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            0            164
  CLUS_2            6            241
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLY MUTATED        0      1      5      0      0
  SCLY WILD-TYPE    121    103     86    121    117
D761V6, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCLY MUTATED        0      6      0
  SCLY WILD-TYPE    159    245    165
D761V7, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            0            159
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLY MUTATED        1      4      1      0      0
  SCLY WILD-TYPE    117    127    150     94     81
D761V8, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLY MUTATED        0      4      0      0      1
  SCLY WILD-TYPE    118    132    115     40     70
D761V9, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCLY MUTATED        0      4      1      0      0
  SCLY WILD-TYPE     48    105    129    101     92
D761V10, multiclass
        clus
vv       SCLY MUTATED SCLY WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(762) Variable = KRT23 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT23 MUTATED        4      2      0     10
  KRT23 WILD-TYPE    131     90    172    166
D762V1, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT23 MUTATED       13      2      2
  KRT23 WILD-TYPE    202    153    160
D762V2, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRT23 MUTATED        5      6      0      0
  KRT23 WILD-TYPE    130    118    125     60
D762V3, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             6             118
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT23 MUTATED        4      6      1
  KRT23 WILD-TYPE    249     96     88
D762V4, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT23 MUTATED        3     13      1
  KRT23 WILD-TYPE    161    234    142
D762V5, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            13             234
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT23 MUTATED        4      3      8      1      1
  KRT23 WILD-TYPE    117    101     83    120    116
D762V6, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KRT23 MUTATED        5     12      0
  KRT23 WILD-TYPE    154    239    165
D762V7, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            12             239
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT23 MUTATED        3     10      3      0      1
  KRT23 WILD-TYPE    115    121    148     94     80
D762V8, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            10             121
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT23 MUTATED        3      9      0      0      2
  KRT23 WILD-TYPE    115    127    115     40     69
D762V9, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             9             127
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRT23 MUTATED        2      7      5      0      0
  KRT23 WILD-TYPE     46    102    125    101     92
D762V10, multiclass
        clus
vv       KRT23 MUTATED KRT23 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(763) Variable = KIRREL2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIRREL2 MUTATED        3      0      1     13
  KIRREL2 WILD-TYPE    132     92    171    163
D763V1, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4              13               163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KIRREL2 MUTATED       13      0      3
  KIRREL2 WILD-TYPE    202    155    159
D763V2, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1              13               202
  CLUS_2               0               155
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIRREL2 MUTATED        6      4      1      1
  KIRREL2 WILD-TYPE    129    120    124     59
D763V3, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KIRREL2 MUTATED       11      1      0
  KIRREL2 WILD-TYPE    242    101     89
D763V4, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1              11               242
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KIRREL2 MUTATED        1     14      2
  KIRREL2 WILD-TYPE    163    233    141
D763V5, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               1               163
  CLUS_2              14               233
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL2 MUTATED        1      3     11      0      2
  KIRREL2 WILD-TYPE    120    101     80    121    115
D763V6, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3              11                80
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  KIRREL2 MUTATED        0     13      4
  KIRREL2 WILD-TYPE    159    238    161
D763V7, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               0               159
  CLUS_2              13               238
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL2 MUTATED        1     10      4      0      2
  KIRREL2 WILD-TYPE    117    121    147     94     79
D763V8, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               1               117
  CLUS_2              10               121
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL2 MUTATED        0      9      1      1      4
  KIRREL2 WILD-TYPE    118    127    114     39     67
D763V9, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               9               127
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIRREL2 MUTATED        0      9      5      1      0
  KIRREL2 WILD-TYPE     48    100    125    100     92
D763V10, multiclass
        clus
vv       KIRREL2 MUTATED KIRREL2 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               9               100
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(764) Variable = GTF3C3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GTF3C3 MUTATED        3      2      4     11
  GTF3C3 WILD-TYPE    132     90    168    165
D764V1, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2               90
  CLUS_3              4              168
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C3 MUTATED       13      2      4
  GTF3C3 WILD-TYPE    202    153    158
D764V2, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1             13              202
  CLUS_2              2              153
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GTF3C3 MUTATED        9      4      1      1
  GTF3C3 WILD-TYPE    126    120    124     59
D764V3, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              9              126
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C3 MUTATED       10      3      2
  GTF3C3 WILD-TYPE    243     99     87
D764V4, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C3 MUTATED        4     12      4
  GTF3C3 WILD-TYPE    160    235    139
D764V5, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             12              235
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C3 MUTATED        3      4      6      4      3
  GTF3C3 WILD-TYPE    118    100     85    117    114
D764V6, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              4              100
  CLUS_3              6               85
  CLUS_4              4              117
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GTF3C3 MUTATED        5     13      2
  GTF3C3 WILD-TYPE    154    238    163
D764V7, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             13              238
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C3 MUTATED        4      9      6      1      0
  GTF3C3 WILD-TYPE    114    122    145     93     81
D764V8, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              9              122
  CLUS_3              6              145
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C3 MUTATED        3      9      2      0      3
  GTF3C3 WILD-TYPE    115    127    113     40     68
D764V9, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              9              127
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GTF3C3 MUTATED        0      9      5      2      1
  GTF3C3 WILD-TYPE     48    100    125     99     91
D764V10, multiclass
        clus
vv       GTF3C3 MUTATED GTF3C3 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              9              100
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(765) Variable = CCDC27 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC27 MUTATED        1      1      4      6
  CCDC27 WILD-TYPE    134     91    168    170
D765V1, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC27 MUTATED        3      4      4
  CCDC27 WILD-TYPE    212    151    158
D765V2, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              4              151
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC27 MUTATED        3      3      3      1
  CCDC27 WILD-TYPE    132    121    122     59
D765V3, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC27 MUTATED        7      2      1
  CCDC27 WILD-TYPE    246    100     88
D765V4, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC27 MUTATED        4      3      4
  CCDC27 WILD-TYPE    160    244    139
D765V5, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              3              244
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC27 MUTATED        1      1      2      4      3
  CCDC27 WILD-TYPE    120    103     89    117    114
D765V6, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              4              117
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC27 MUTATED        4      4      4
  CCDC27 WILD-TYPE    155    247    161
D765V7, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              4              155
  CLUS_2              4              247
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC27 MUTATED        1      1      4      4      2
  CCDC27 WILD-TYPE    117    130    147     90     79
D765V8, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              130
  CLUS_3              4              147
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC27 MUTATED        4      1      1      0      4
  CCDC27 WILD-TYPE    114    135    114     40     67
D765V9, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC27 MUTATED        0      1      2      3      4
  CCDC27 WILD-TYPE     48    108    128     98     88
D765V10, multiclass
        clus
vv       CCDC27 MUTATED CCDC27 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              2              128
  CLUS_4              3               98
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(766) Variable = SH3BP2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3BP2 MUTATED        0      0      0      7
  SH3BP2 WILD-TYPE    135     92    172    169
D766V1, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3BP2 MUTATED        4      0      1
  SH3BP2 WILD-TYPE    211    155    161
D766V2, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SH3BP2 MUTATED        3      3      0      0
  SH3BP2 WILD-TYPE    132    121    125     60
D766V3, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3BP2 MUTATED        4      2      0
  SH3BP2 WILD-TYPE    249    100     89
D766V4, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3BP2 MUTATED        0      3      4
  SH3BP2 WILD-TYPE    164    244    139
D766V5, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3BP2 MUTATED        0      1      5      0      1
  SH3BP2 WILD-TYPE    121    103     86    121    116
D766V6, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SH3BP2 MUTATED        0      7      0
  SH3BP2 WILD-TYPE    159    244    165
D766V7, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3BP2 MUTATED        0      1      6      0      0
  SH3BP2 WILD-TYPE    118    130    145     94     81
D766V8, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3BP2 MUTATED        0      1      0      0      4
  SH3BP2 WILD-TYPE    118    135    115     40     67
D766V9, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SH3BP2 MUTATED        0      1      4      0      0
  SH3BP2 WILD-TYPE     48    108    126    101     92
D766V10, multiclass
        clus
vv       SH3BP2 MUTATED SH3BP2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(767) Variable = TIGD7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIGD7 MUTATED        1      3      2      6
  TIGD7 WILD-TYPE    134     89    170    170
D767V1, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             2             170
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIGD7 MUTATED        8      2      2
  TIGD7 WILD-TYPE    207    153    160
D767V2, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIGD7 MUTATED        4      4      1      0
  TIGD7 WILD-TYPE    131    120    124     60
D767V3, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIGD7 MUTATED        5      3      1
  TIGD7 WILD-TYPE    248     99     88
D767V4, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIGD7 MUTATED        2      7      3
  TIGD7 WILD-TYPE    162    240    140
D767V5, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIGD7 MUTATED        1      1      8      1      1
  TIGD7 WILD-TYPE    120    103     83    120    116
D767V6, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TIGD7 MUTATED        2      9      1
  TIGD7 WILD-TYPE    157    242    164
D767V7, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIGD7 MUTATED        1      7      2      1      1
  TIGD7 WILD-TYPE    117    124    149     93     80
D767V8, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIGD7 MUTATED        3      4      1      2      2
  TIGD7 WILD-TYPE    115    132    114     38     69
D767V9, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIGD7 MUTATED        2      6      3      0      1
  TIGD7 WILD-TYPE     46    103    127    101     91
D767V10, multiclass
        clus
vv       TIGD7 MUTATED TIGD7 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(768) Variable = B4GALNT4 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B4GALNT4 MUTATED        1      1      0     17
  B4GALNT4 WILD-TYPE    134     91    172    159
D768V1, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4               17                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  B4GALNT4 MUTATED       12      0      2
  B4GALNT4 WILD-TYPE    203    155    160
D768V2, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1               12                203
  CLUS_2                0                155
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  B4GALNT4 MUTATED        5      5      2      2
  B4GALNT4 WILD-TYPE    130    119    123     58
D768V3, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                5                130
  CLUS_2                5                119
  CLUS_3                2                123
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  B4GALNT4 MUTATED        8      4      2
  B4GALNT4 WILD-TYPE    245     98     87
D768V4, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                8                245
  CLUS_2                4                 98
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  B4GALNT4 MUTATED        1     12      6
  B4GALNT4 WILD-TYPE    163    235    137
D768V5, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                1                163
  CLUS_2               12                235
  CLUS_3                6                137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALNT4 MUTATED        0      5     10      0      4
  B4GALNT4 WILD-TYPE    121     99     81    121    113
D768V6, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                5                 99
  CLUS_3               10                 81
  CLUS_4                0                121
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  B4GALNT4 MUTATED        0     13      6
  B4GALNT4 WILD-TYPE    159    238    159
D768V7, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                0                159
  CLUS_2               13                238
  CLUS_3                6                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALNT4 MUTATED        1     10      7      0      1
  B4GALNT4 WILD-TYPE    117    121    144     94     80
D768V8, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                1                117
  CLUS_2               10                121
  CLUS_3                7                144
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALNT4 MUTATED        0      6      3      2      3
  B4GALNT4 WILD-TYPE    118    130    112     38     68
D768V9, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                130
  CLUS_3                3                112
  CLUS_4                2                 38
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  B4GALNT4 MUTATED        1      6      6      1      0
  B4GALNT4 WILD-TYPE     47    103    124    100     92
D768V10, multiclass
        clus
vv       B4GALNT4 MUTATED B4GALNT4 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                6                103
  CLUS_3                6                124
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(769) Variable = ARHGEF11 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGEF11 MUTATED        1      4      2     15
  ARHGEF11 WILD-TYPE    134     88    170    161
D769V1, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                4                 88
  CLUS_3                2                170
  CLUS_4               15                161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF11 MUTATED       13      3      2
  ARHGEF11 WILD-TYPE    202    152    160
D769V2, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1               13                202
  CLUS_2                3                152
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGEF11 MUTATED       11      3      0      2
  ARHGEF11 WILD-TYPE    124    121    125     58
D769V3, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1               11                124
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF11 MUTATED       14      2      0
  ARHGEF11 WILD-TYPE    239    100     89
D769V4, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1               14                239
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF11 MUTATED        3     15      4
  ARHGEF11 WILD-TYPE    161    232    139
D769V5, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                3                161
  CLUS_2               15                232
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF11 MUTATED        1      9      8      1      3
  ARHGEF11 WILD-TYPE    120     95     83    120    114
D769V6, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                9                 95
  CLUS_3                8                 83
  CLUS_4                1                120
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF11 MUTATED        3     16      3
  ARHGEF11 WILD-TYPE    156    235    162
D769V7, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                3                156
  CLUS_2               16                235
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF11 MUTATED        2      9      9      1      1
  ARHGEF11 WILD-TYPE    116    122    142     93     80
D769V8, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                9                122
  CLUS_3                9                142
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF11 MUTATED        1      9      2      0      5
  ARHGEF11 WILD-TYPE    117    127    113     40     66
D769V9, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                9                127
  CLUS_3                2                113
  CLUS_4                0                 40
  CLUS_5                5                 66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF11 MUTATED        0      6      8      2      1
  ARHGEF11 WILD-TYPE     48    103    122     99     91
D769V10, multiclass
        clus
vv       ARHGEF11 MUTATED ARHGEF11 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                6                103
  CLUS_3                8                122
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(770) Variable = SHMT2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SHMT2 MUTATED        1      1      3      7
  SHMT2 WILD-TYPE    134     91    169    169
D770V1, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SHMT2 MUTATED        5      2      2
  SHMT2 WILD-TYPE    210    153    160
D770V2, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SHMT2 MUTATED        7      2      1      1
  SHMT2 WILD-TYPE    128    122    124     59
D770V3, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SHMT2 MUTATED        8      2      1
  SHMT2 WILD-TYPE    245    100     88
D770V4, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SHMT2 MUTATED        2      7      2
  SHMT2 WILD-TYPE    162    240    141
D770V5, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SHMT2 MUTATED        2      1      4      1      3
  SHMT2 WILD-TYPE    119    103     87    120    114
D770V6, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SHMT2 MUTATED        2      7      3
  SHMT2 WILD-TYPE    157    244    162
D770V7, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SHMT2 MUTATED        2      5      3      1      1
  SHMT2 WILD-TYPE    116    126    148     93     80
D770V8, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SHMT2 MUTATED        1      2      0      0      4
  SHMT2 WILD-TYPE    117    134    115     40     67
D770V9, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SHMT2 MUTATED        0      2      2      2      1
  SHMT2 WILD-TYPE     48    107    128     99     91
D770V10, multiclass
        clus
vv       SHMT2 MUTATED SHMT2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(771) Variable = USP30 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP30 MUTATED        1      0      1      7
  USP30 WILD-TYPE    134     92    171    169
D771V1, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP30 MUTATED        7      0      1
  USP30 WILD-TYPE    208    155    161
D771V2, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP30 MUTATED        4      1      0      1
  USP30 WILD-TYPE    131    123    125     59
D771V3, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP30 MUTATED        5      1      0
  USP30 WILD-TYPE    248    101     89
D771V4, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP30 MUTATED        0      9      1
  USP30 WILD-TYPE    164    238    142
D771V5, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             9             238
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP30 MUTATED        1      5      3      0      1
  USP30 WILD-TYPE    120     99     88    121    116
D771V6, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  USP30 MUTATED        0      8      2
  USP30 WILD-TYPE    159    243    163
D771V7, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             8             243
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP30 MUTATED        0      6      4      0      0
  USP30 WILD-TYPE    118    125    147     94     81
D771V8, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP30 MUTATED        0      5      1      0      2
  USP30 WILD-TYPE    118    131    114     40     69
D771V9, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP30 MUTATED        0      4      4      0      0
  USP30 WILD-TYPE     48    105    126    101     92
D771V10, multiclass
        clus
vv       USP30 MUTATED USP30 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(772) Variable = ASPN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASPN MUTATED        0      0      1      6
  ASPN WILD-TYPE    135     92    171    170
D772V1, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASPN MUTATED        3      1      2
  ASPN WILD-TYPE    212    154    160
D772V2, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            3            212
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASPN MUTATED        3      3      0      0
  ASPN WILD-TYPE    132    121    125     60
D772V3, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASPN MUTATED        3      2      1
  ASPN WILD-TYPE    250    100     88
D772V4, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            3            250
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASPN MUTATED        2      3      2
  ASPN WILD-TYPE    162    244    141
D772V5, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASPN MUTATED        0      1      4      1      1
  ASPN WILD-TYPE    121    103     87    120    116
D772V6, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASPN MUTATED        1      6      0
  ASPN WILD-TYPE    158    245    165
D772V7, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASPN MUTATED        1      1      4      1      0
  ASPN WILD-TYPE    117    130    147     93     81
D772V8, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            130
  CLUS_3            4            147
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASPN MUTATED        1      1      0      1      2
  ASPN WILD-TYPE    117    135    115     39     69
D772V9, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASPN MUTATED        1      0      3      0      1
  ASPN WILD-TYPE     47    109    127    101     91
D772V10, multiclass
        clus
vv       ASPN MUTATED ASPN WILD-TYPE
  CLUS_1            1             47
  CLUS_2            0            109
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(773) Variable = LZTR1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LZTR1 MUTATED        2      3      5     14
  LZTR1 WILD-TYPE    133     89    167    162
D773V1, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3              89
  CLUS_3             5             167
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LZTR1 MUTATED       14      4      1
  LZTR1 WILD-TYPE    201    151    161
D773V2, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             4             151
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LZTR1 MUTATED       12      4      2      3
  LZTR1 WILD-TYPE    123    120    123     57
D773V3, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1            12             123
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LZTR1 MUTATED       18      1      2
  LZTR1 WILD-TYPE    235    101     87
D773V4, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1            18             235
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LZTR1 MUTATED        6     14      4
  LZTR1 WILD-TYPE    158    233    139
D773V5, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            14             233
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LZTR1 MUTATED        1      7      8      5      3
  LZTR1 WILD-TYPE    120     97     83    116    114
D773V6, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             7              97
  CLUS_3             8              83
  CLUS_4             5             116
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LZTR1 MUTATED        6     14      4
  LZTR1 WILD-TYPE    153    237    161
D773V7, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            14             237
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LZTR1 MUTATED        3     10      6      3      2
  LZTR1 WILD-TYPE    115    121    145     91     79
D773V8, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            10             121
  CLUS_3             6             145
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LZTR1 MUTATED        4      9      3      0      3
  LZTR1 WILD-TYPE    114    127    112     40     68
D773V9, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             127
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LZTR1 MUTATED        0      9      5      2      3
  LZTR1 WILD-TYPE     48    100    125     99     89
D773V10, multiclass
        clus
vv       LZTR1 MUTATED LZTR1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             9             100
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(774) Variable = CNOT6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT6 MUTATED        1      1      1      7
  CNOT6 WILD-TYPE    134     91    171    169
D774V1, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT6 MUTATED        3      1      4
  CNOT6 WILD-TYPE    212    154    158
D774V2, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CNOT6 MUTATED        4      3      0      2
  CNOT6 WILD-TYPE    131    121    125     58
D774V3, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT6 MUTATED        6      3      0
  CNOT6 WILD-TYPE    247     99     89
D774V4, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT6 MUTATED        2      3      4
  CNOT6 WILD-TYPE    162    244    139
D774V5, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNOT6 MUTATED        2      2      1      1      3
  CNOT6 WILD-TYPE    119    102     90    120    114
D774V6, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             1              90
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CNOT6 MUTATED        0      6      4
  CNOT6 WILD-TYPE    159    245    161
D774V7, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNOT6 MUTATED        0      3      5      0      2
  CNOT6 WILD-TYPE    118    128    146     94     79
D774V8, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNOT6 MUTATED        0      2      2      0      3
  CNOT6 WILD-TYPE    118    134    113     40     68
D774V9, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CNOT6 MUTATED        0      1      4      2      0
  CNOT6 WILD-TYPE     48    108    126     99     92
D774V10, multiclass
        clus
vv       CNOT6 MUTATED CNOT6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(775) Variable = KIFAP3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIFAP3 MUTATED        2      2      2      9
  KIFAP3 WILD-TYPE    133     90    170    167
D775V1, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              2              170
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIFAP3 MUTATED        9      1      2
  KIFAP3 WILD-TYPE    206    154    160
D775V2, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIFAP3 MUTATED        4      2      4      2
  KIFAP3 WILD-TYPE    131    122    121     58
D775V3, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              4              121
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIFAP3 MUTATED        8      1      3
  KIFAP3 WILD-TYPE    245    101     86
D775V4, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              1              101
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIFAP3 MUTATED        1      8      5
  KIFAP3 WILD-TYPE    163    239    138
D775V5, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              8              239
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIFAP3 MUTATED        4      3      3      1      3
  KIFAP3 WILD-TYPE    117    101     88    120    114
D775V6, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              3              101
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KIFAP3 MUTATED        3      8      4
  KIFAP3 WILD-TYPE    156    243    161
D775V7, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              8              243
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIFAP3 MUTATED        3      6      2      1      3
  KIFAP3 WILD-TYPE    115    125    149     93     78
D775V8, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              125
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIFAP3 MUTATED        2      3      2      2      2
  KIFAP3 WILD-TYPE    116    133    113     38     69
D775V9, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIFAP3 MUTATED        2      5      1      2      1
  KIFAP3 WILD-TYPE     46    104    129     99     91
D775V10, multiclass
        clus
vv       KIFAP3 MUTATED KIFAP3 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              5              104
  CLUS_3              1              129
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(776) Variable = MFN1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MFN1 MUTATED        3      0      2      7
  MFN1 WILD-TYPE    132     92    170    169
D776V1, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFN1 MUTATED        5      3      2
  MFN1 WILD-TYPE    210    152    160
D776V2, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MFN1 MUTATED        3      5      0      1
  MFN1 WILD-TYPE    132    119    125     59
D776V3, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFN1 MUTATED        6      3      0
  MFN1 WILD-TYPE    247     99     89
D776V4, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFN1 MUTATED        3      7      1
  MFN1 WILD-TYPE    161    240    142
D776V5, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFN1 MUTATED        3      5      0      2      1
  MFN1 WILD-TYPE    118     99     91    119    116
D776V6, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            5             99
  CLUS_3            0             91
  CLUS_4            2            119
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MFN1 MUTATED        3      9      0
  MFN1 WILD-TYPE    156    242    165
D776V7, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFN1 MUTATED        2      3      6      1      0
  MFN1 WILD-TYPE    116    128    145     93     81
D776V8, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFN1 MUTATED        3      4      0      0      3
  MFN1 WILD-TYPE    115    132    115     40     68
D776V9, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MFN1 MUTATED        2      3      4      0      1
  MFN1 WILD-TYPE     46    106    126    101     91
D776V10, multiclass
        clus
vv       MFN1 MUTATED MFN1 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(777) Variable = MZF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MZF1 MUTATED        0      1      1     13
  MZF1 WILD-TYPE    135     91    171    163
D777V1, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MZF1 MUTATED       10      1      4
  MZF1 WILD-TYPE    205    154    158
D777V2, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MZF1 MUTATED        4      2      3      3
  MZF1 WILD-TYPE    131    122    122     57
D777V3, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2            122
  CLUS_3            3            122
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MZF1 MUTATED        7      1      4
  MZF1 WILD-TYPE    246    101     85
D777V4, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            1            101
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MZF1 MUTATED        1      7      5
  MZF1 WILD-TYPE    163    240    138
D777V5, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MZF1 MUTATED        1      3      5      1      3
  MZF1 WILD-TYPE    120    101     86    120    114
D777V6, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MZF1 MUTATED        2      9      4
  MZF1 WILD-TYPE    157    242    161
D777V7, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MZF1 MUTATED        2      4      6      1      2
  MZF1 WILD-TYPE    116    127    145     93     79
D777V8, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MZF1 MUTATED        1      3      2      1      6
  MZF1 WILD-TYPE    117    133    113     39     65
D777V9, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MZF1 MUTATED        1      3      7      1      1
  MZF1 WILD-TYPE     47    106    123    100     91
D777V10, multiclass
        clus
vv       MZF1 MUTATED MZF1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(778) Variable = SCAMP2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCAMP2 MUTATED        1      0      1      6
  SCAMP2 WILD-TYPE    134     92    171    170
D778V1, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCAMP2 MUTATED        4      1      1
  SCAMP2 WILD-TYPE    211    154    161
D778V2, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCAMP2 MUTATED        1      4      2      0
  SCAMP2 WILD-TYPE    134    120    123     60
D778V3, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCAMP2 MUTATED        3      3      1
  SCAMP2 WILD-TYPE    250     99     88
D778V4, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCAMP2 MUTATED        1      5      2
  SCAMP2 WILD-TYPE    163    242    141
D778V5, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCAMP2 MUTATED        1      1      4      1      1
  SCAMP2 WILD-TYPE    120    103     87    120    116
D778V6, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SCAMP2 MUTATED        1      6      1
  SCAMP2 WILD-TYPE    158    245    164
D778V7, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCAMP2 MUTATED        0      2      3      1      2
  SCAMP2 WILD-TYPE    118    129    148     93     79
D778V8, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCAMP2 MUTATED        1      2      1      0      2
  SCAMP2 WILD-TYPE    117    134    114     40     69
D778V9, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCAMP2 MUTATED        0      2      3      0      1
  SCAMP2 WILD-TYPE     48    107    127    101     91
D778V10, multiclass
        clus
vv       SCAMP2 MUTATED SCAMP2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(779) Variable = LCE1A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LCE1A MUTATED        1      1      2      0
  LCE1A WILD-TYPE    134     91    170    176
D779V1, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             0             176
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LCE1A MUTATED        3      0      1
  LCE1A WILD-TYPE    212    155    161
D779V2, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LCE1A MUTATED        1      0      2      1
  LCE1A WILD-TYPE    134    124    123     59
D779V3, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0             124
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LCE1A MUTATED        1      2      1
  LCE1A WILD-TYPE    252    100     88
D779V4, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1             252
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LCE1A MUTATED        0      2      2
  LCE1A WILD-TYPE    164    245    141
D779V5, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             0             164
  CLUS_2             2             245
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LCE1A MUTATED        1      1      0      0      2
  LCE1A WILD-TYPE    120    103     91    121    115
D779V6, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             0              91
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LCE1A MUTATED        1      1      2
  LCE1A WILD-TYPE    158    250    163
D779V7, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1             158
  CLUS_2             1             250
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LCE1A MUTATED        4      0      0      0      0
  LCE1A WILD-TYPE    114    131    151     94     81
D779V8, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             4             114
  CLUS_2             0             131
  CLUS_3             0             151
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LCE1A MUTATED        1      1      1      1      0
  LCE1A WILD-TYPE    117    135    114     39     71
D779V9, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LCE1A MUTATED        1      1      0      2      0
  LCE1A WILD-TYPE     47    108    130     99     92
D779V10, multiclass
        clus
vv       LCE1A MUTATED LCE1A WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             0             130
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(780) Variable = TMEM55A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM55A MUTATED        0      1      1      3
  TMEM55A WILD-TYPE    135     91    171    173
D780V1, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM55A MUTATED        2      1      1
  TMEM55A WILD-TYPE    213    154    161
D780V2, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               2               213
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM55A MUTATED        2      3      0      0
  TMEM55A WILD-TYPE    133    121    125     60
D780V3, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM55A MUTATED        5      0      0
  TMEM55A WILD-TYPE    248    102     89
D780V4, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM55A MUTATED        0      3      1
  TMEM55A WILD-TYPE    164    244    142
D780V5, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               0               164
  CLUS_2               3               244
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM55A MUTATED        0      0      3      0      1
  TMEM55A WILD-TYPE    121    104     88    121    116
D780V6, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM55A MUTATED        1      3      1
  TMEM55A WILD-TYPE    158    248    164
D780V7, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               1               158
  CLUS_2               3               248
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM55A MUTATED        0      2      1      1      1
  TMEM55A WILD-TYPE    118    129    150     93     80
D780V8, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               129
  CLUS_3               1               150
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM55A MUTATED        1      2      1      0      0
  TMEM55A WILD-TYPE    117    134    114     40     71
D780V9, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM55A MUTATED        0      2      0      1      1
  TMEM55A WILD-TYPE     48    107    130    100     91
D780V10, multiclass
        clus
vv       TMEM55A MUTATED TMEM55A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(781) Variable = PNPLA7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PNPLA7 MUTATED        2      3      3     18
  PNPLA7 WILD-TYPE    133     89    169    158
D781V1, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4             18              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PNPLA7 MUTATED       16      2      4
  PNPLA7 WILD-TYPE    199    153    158
D781V2, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1             16              199
  CLUS_2              2              153
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PNPLA7 MUTATED        7     11      1      1
  PNPLA7 WILD-TYPE    128    113    124     59
D781V3, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              7              128
  CLUS_2             11              113
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PNPLA7 MUTATED       11      7      2
  PNPLA7 WILD-TYPE    242     95     87
D781V4, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              7               95
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PNPLA7 MUTATED        2     15      8
  PNPLA7 WILD-TYPE    162    232    135
D781V5, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             15              232
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNPLA7 MUTATED        1      8     10      1      5
  PNPLA7 WILD-TYPE    120     96     81    120    112
D781V6, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              8               96
  CLUS_3             10               81
  CLUS_4              1              120
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PNPLA7 MUTATED        1     22      3
  PNPLA7 WILD-TYPE    158    229    162
D781V7, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             22              229
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNPLA7 MUTATED        2     11     11      1      1
  PNPLA7 WILD-TYPE    116    120    140     93     80
D781V8, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             11              120
  CLUS_3             11              140
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNPLA7 MUTATED        1     10      2      0      7
  PNPLA7 WILD-TYPE    117    126    113     40     64
D781V9, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              1              117
  CLUS_2             10              126
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PNPLA7 MUTATED        0      8      9      2      1
  PNPLA7 WILD-TYPE     48    101    121     99     91
D781V10, multiclass
        clus
vv       PNPLA7 MUTATED PNPLA7 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              8              101
  CLUS_3              9              121
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(782) Variable = STAT6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAT6 MUTATED        0      0      3      6
  STAT6 WILD-TYPE    135     92    169    170
D782V1, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAT6 MUTATED        4      2      1
  STAT6 WILD-TYPE    211    153    161
D782V2, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STAT6 MUTATED        3      5      1      0
  STAT6 WILD-TYPE    132    119    124     60
D782V3, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAT6 MUTATED        7      1      1
  STAT6 WILD-TYPE    246    101     88
D782V4, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAT6 MUTATED        3      3      2
  STAT6 WILD-TYPE    161    244    141
D782V5, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             3             244
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STAT6 MUTATED        1      1      2      2      2
  STAT6 WILD-TYPE    120    103     89    119    115
D782V6, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STAT6 MUTATED        2      5      2
  STAT6 WILD-TYPE    157    246    163
D782V7, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STAT6 MUTATED        0      3      2      2      2
  STAT6 WILD-TYPE    118    128    149     92     79
D782V8, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STAT6 MUTATED        2      3      2      0      0
  STAT6 WILD-TYPE    116    133    113     40     71
D782V9, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STAT6 MUTATED        0      2      2      1      2
  STAT6 WILD-TYPE     48    107    128    100     90
D782V10, multiclass
        clus
vv       STAT6 MUTATED STAT6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(783) Variable = STK33 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK33 MUTATED        1      1      3      8
  STK33 WILD-TYPE    134     91    169    168
D783V1, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK33 MUTATED       10      0      2
  STK33 WILD-TYPE    205    155    160
D783V2, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STK33 MUTATED        6      2      0      1
  STK33 WILD-TYPE    129    122    125     59
D783V3, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK33 MUTATED        8      1      0
  STK33 WILD-TYPE    245    101     89
D783V4, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK33 MUTATED        3      7      2
  STK33 WILD-TYPE    161    240    141
D783V5, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK33 MUTATED        0      6      3      1      2
  STK33 WILD-TYPE    121     98     88    120    115
D783V6, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             6              98
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STK33 MUTATED        1      8      4
  STK33 WILD-TYPE    158    243    161
D783V7, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK33 MUTATED        1      5      5      0      2
  STK33 WILD-TYPE    117    126    146     94     79
D783V8, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK33 MUTATED        1      4      2      1      3
  STK33 WILD-TYPE    117    132    113     39     68
D783V9, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STK33 MUTATED        1      4      3      3      0
  STK33 WILD-TYPE     47    105    127     98     92
D783V10, multiclass
        clus
vv       STK33 MUTATED STK33 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(784) Variable = DNAJA1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAJA1 MUTATED        0      1      1     10
  DNAJA1 WILD-TYPE    135     91    171    166
D784V1, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJA1 MUTATED        9      0      1
  DNAJA1 WILD-TYPE    206    155    161
D784V2, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAJA1 MUTATED        4      4      0      2
  DNAJA1 WILD-TYPE    131    120    125     58
D784V3, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJA1 MUTATED        7      3      0
  DNAJA1 WILD-TYPE    246     99     89
D784V4, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJA1 MUTATED        0     10      2
  DNAJA1 WILD-TYPE    164    237    141
D784V5, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2             10              237
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJA1 MUTATED        0      5      6      0      1
  DNAJA1 WILD-TYPE    121     99     85    121    116
D784V6, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              5               99
  CLUS_3              6               85
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAJA1 MUTATED        0     10      2
  DNAJA1 WILD-TYPE    159    241    163
D784V7, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2             10              241
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJA1 MUTATED        1      7      4      0      0
  DNAJA1 WILD-TYPE    117    124    147     94     81
D784V8, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              124
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJA1 MUTATED        0      5      1      0      3
  DNAJA1 WILD-TYPE    118    131    114     40     68
D784V9, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              131
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAJA1 MUTATED        0      6      3      0      0
  DNAJA1 WILD-TYPE     48    103    127    101     92
D784V10, multiclass
        clus
vv       DNAJA1 MUTATED DNAJA1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(785) Variable = IFITM1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFITM1 MUTATED        0      0      2      3
  IFITM1 WILD-TYPE    135     92    170    173
D785V1, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFITM1 MUTATED        2      2      1
  IFITM1 WILD-TYPE    213    153    161
D785V2, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              2              213
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFITM1 MUTATED        4      0      1      0
  IFITM1 WILD-TYPE    131    124    124     60
D785V3, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              0              124
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFITM1 MUTATED        4      0      1
  IFITM1 WILD-TYPE    249    102     88
D785V4, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFITM1 MUTATED        1      2      2
  IFITM1 WILD-TYPE    163    245    141
D785V5, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              2              245
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFITM1 MUTATED        0      2      0      1      2
  IFITM1 WILD-TYPE    121    102     91    120    115
D785V6, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              0               91
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IFITM1 MUTATED        1      2      2
  IFITM1 WILD-TYPE    158    249    163
D785V7, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              2              249
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFITM1 MUTATED        0      0      2      1      2
  IFITM1 WILD-TYPE    118    131    149     93     79
D785V8, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              0              131
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFITM1 MUTATED        1      1      2      0      1
  IFITM1 WILD-TYPE    117    135    113     40     70
D785V9, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFITM1 MUTATED        0      0      3      1      1
  IFITM1 WILD-TYPE     48    109    127    100     91
D785V10, multiclass
        clus
vv       IFITM1 MUTATED IFITM1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              0              109
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(786) Variable = FAM151A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM151A MUTATED        0      1      1      6
  FAM151A WILD-TYPE    135     91    171    170
D786V1, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM151A MUTATED        4      1      1
  FAM151A WILD-TYPE    211    154    161
D786V2, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM151A MUTATED        2      5      0      0
  FAM151A WILD-TYPE    133    119    125     60
D786V3, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               5               119
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM151A MUTATED        5      2      0
  FAM151A WILD-TYPE    248    100     89
D786V4, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               5               248
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM151A MUTATED        2      6      0
  FAM151A WILD-TYPE    162    241    143
D786V5, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               2               162
  CLUS_2               6               241
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM151A MUTATED        1      1      5      1      0
  FAM151A WILD-TYPE    120    103     86    120    117
D786V6, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM151A MUTATED        3      5      0
  FAM151A WILD-TYPE    156    246    165
D786V7, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               3               156
  CLUS_2               5               246
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM151A MUTATED        1      4      1      2      0
  FAM151A WILD-TYPE    117    127    150     92     81
D786V8, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               1               150
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM151A MUTATED        2      2      0      0      1
  FAM151A WILD-TYPE    116    134    115     40     70
D786V9, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM151A MUTATED        0      3      0      0      2
  FAM151A WILD-TYPE     48    106    130    101     90
D786V10, multiclass
        clus
vv       FAM151A MUTATED FAM151A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               0               130
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(787) Variable = HMGCLL1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HMGCLL1 MUTATED        0      1      3      6
  HMGCLL1 WILD-TYPE    135     91    169    170
D787V1, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HMGCLL1 MUTATED        5      0      4
  HMGCLL1 WILD-TYPE    210    155    158
D787V2, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HMGCLL1 MUTATED        3      2      2      2
  HMGCLL1 WILD-TYPE    132    122    123     58
D787V3, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HMGCLL1 MUTATED        7      1      1
  HMGCLL1 WILD-TYPE    246    101     88
D787V4, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HMGCLL1 MUTATED        0      6      4
  HMGCLL1 WILD-TYPE    164    241    139
D787V5, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               6               241
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMGCLL1 MUTATED        1      5      2      0      2
  HMGCLL1 WILD-TYPE    120     99     89    121    115
D787V6, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               5                99
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HMGCLL1 MUTATED        1      5      4
  HMGCLL1 WILD-TYPE    158    246    161
D787V7, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               5               246
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMGCLL1 MUTATED        2      5      2      0      1
  HMGCLL1 WILD-TYPE    116    126    149     94     80
D787V8, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMGCLL1 MUTATED        0      1      2      0      3
  HMGCLL1 WILD-TYPE    118    135    113     40     68
D787V9, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMGCLL1 MUTATED        0      1      1      4      0
  HMGCLL1 WILD-TYPE     48    108    129     97     92
D787V10, multiclass
        clus
vv       HMGCLL1 MUTATED HMGCLL1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               1               129
  CLUS_4               4                97
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(788) Variable = GIPC3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GIPC3 MUTATED        1      0      0      7
  GIPC3 WILD-TYPE    134     92    172    169
D788V1, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GIPC3 MUTATED        8      0      1
  GIPC3 WILD-TYPE    207    155    161
D788V2, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GIPC3 MUTATED        4      1      0      0
  GIPC3 WILD-TYPE    131    123    125     60
D788V3, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GIPC3 MUTATED        4      0      1
  GIPC3 WILD-TYPE    249    102     88
D788V4, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GIPC3 MUTATED        1      5      3
  GIPC3 WILD-TYPE    163    242    140
D788V5, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIPC3 MUTATED        0      0      6      1      2
  GIPC3 WILD-TYPE    121    104     85    120    115
D788V6, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GIPC3 MUTATED        1      7      1
  GIPC3 WILD-TYPE    158    244    164
D788V7, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIPC3 MUTATED        1      5      2      0      1
  GIPC3 WILD-TYPE    117    126    149     94     80
D788V8, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIPC3 MUTATED        0      6      1      0      1
  GIPC3 WILD-TYPE    118    130    114     40     70
D788V9, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIPC3 MUTATED        0      3      4      1      0
  GIPC3 WILD-TYPE     48    106    126    100     92
D788V10, multiclass
        clus
vv       GIPC3 MUTATED GIPC3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(789) Variable = EFHA2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHA2 MUTATED        1      0      2     12
  EFHA2 WILD-TYPE    134     92    170    164
D789V1, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA2 MUTATED       10      1      3
  EFHA2 WILD-TYPE    205    154    159
D789V2, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHA2 MUTATED        3      3      2      1
  EFHA2 WILD-TYPE    132    121    123     59
D789V3, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA2 MUTATED        5      2      2
  EFHA2 WILD-TYPE    248    100     87
D789V4, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA2 MUTATED        0     12      3
  EFHA2 WILD-TYPE    164    235    140
D789V5, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            12             235
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA2 MUTATED        1      5      7      0      2
  EFHA2 WILD-TYPE    120     99     84    121    115
D789V6, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHA2 MUTATED        0     12      3
  EFHA2 WILD-TYPE    159    239    162
D789V7, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA2 MUTATED        2      6      6      0      1
  EFHA2 WILD-TYPE    116    125    145     94     80
D789V8, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA2 MUTATED        0      8      2      1      2
  EFHA2 WILD-TYPE    118    128    113     39     69
D789V9, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHA2 MUTATED        0      5      7      1      0
  EFHA2 WILD-TYPE     48    104    123    100     92
D789V10, multiclass
        clus
vv       EFHA2 MUTATED EFHA2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(790) Variable = PSD3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSD3 MUTATED        1      1      3     15
  PSD3 WILD-TYPE    134     91    169    161
D790V1, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PSD3 MUTATED       13      1      3
  PSD3 WILD-TYPE    202    154    159
D790V2, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1           13            202
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSD3 MUTATED        9      6      1      0
  PSD3 WILD-TYPE    126    118    124     60
D790V3, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            9            126
  CLUS_2            6            118
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PSD3 MUTATED       12      3      1
  PSD3 WILD-TYPE    241     99     88
D790V4, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1           12            241
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PSD3 MUTATED        4     12      3
  PSD3 WILD-TYPE    160    235    140
D790V5, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           12            235
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD3 MUTATED        2      2     13      1      1
  PSD3 WILD-TYPE    119    102     78    120    116
D790V6, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3           13             78
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PSD3 MUTATED        1     16      3
  PSD3 WILD-TYPE    158    235    162
D790V7, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           16            235
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD3 MUTATED        0     11      6      1      2
  PSD3 WILD-TYPE    118    120    145     93     79
D790V8, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2           11            120
  CLUS_3            6            145
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD3 MUTATED        1      8      2      2      3
  PSD3 WILD-TYPE    117    128    113     38     68
D790V9, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            128
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD3 MUTATED        1      6      7      1      1
  PSD3 WILD-TYPE     47    103    123    100     91
D790V10, multiclass
        clus
vv       PSD3 MUTATED PSD3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            6            103
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(791) Variable = HSPB8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSPB8 MUTATED        0      0      0      6
  HSPB8 WILD-TYPE    135     92    172    170
D791V1, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPB8 MUTATED        6      0      0
  HSPB8 WILD-TYPE    209    155    162
D791V2, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSPB8 MUTATED        3      1      0      0
  HSPB8 WILD-TYPE    132    123    125     60
D791V3, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPB8 MUTATED        4      0      0
  HSPB8 WILD-TYPE    249    102     89
D791V4, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPB8 MUTATED        0      5      1
  HSPB8 WILD-TYPE    164    242    142
D791V5, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPB8 MUTATED        0      1      5      0      0
  HSPB8 WILD-TYPE    121    103     86    121    117
D791V6, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HSPB8 MUTATED        0      6      0
  HSPB8 WILD-TYPE    159    245    165
D791V7, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPB8 MUTATED        0      4      2      0      0
  HSPB8 WILD-TYPE    118    127    149     94     81
D791V8, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPB8 MUTATED        0      3      0      0      2
  HSPB8 WILD-TYPE    118    133    115     40     69
D791V9, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSPB8 MUTATED        0      2      3      0      0
  HSPB8 WILD-TYPE     48    107    127    101     92
D791V10, multiclass
        clus
vv       HSPB8 MUTATED HSPB8 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(792) Variable = CASKIN2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASKIN2 MUTATED        1      1      5      9
  CASKIN2 WILD-TYPE    134     91    167    167
D792V1, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               5               167
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CASKIN2 MUTATED        7      2      6
  CASKIN2 WILD-TYPE    208    153    156
D792V2, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               2               153
  CLUS_3               6               156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CASKIN2 MUTATED        5      7      1      0
  CASKIN2 WILD-TYPE    130    117    124     60
D792V3, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               7               117
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CASKIN2 MUTATED        7      5      1
  CASKIN2 WILD-TYPE    246     97     88
D792V4, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               5                97
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CASKIN2 MUTATED        4      9      3
  CASKIN2 WILD-TYPE    160    238    140
D792V5, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               9               238
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASKIN2 MUTATED        3      3      7      2      1
  CASKIN2 WILD-TYPE    118    101     84    119    116
D792V6, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               3               101
  CLUS_3               7                84
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CASKIN2 MUTATED        3     11      2
  CASKIN2 WILD-TYPE    156    240    163
D792V7, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              11               240
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASKIN2 MUTATED        3      6      6      1      0
  CASKIN2 WILD-TYPE    115    125    145     93     81
D792V8, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               6               125
  CLUS_3               6               145
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASKIN2 MUTATED        0      5      1      2      6
  CASKIN2 WILD-TYPE    118    131    114     38     65
D792V9, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               1               114
  CLUS_4               2                38
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CASKIN2 MUTATED        1      4      7      1      1
  CASKIN2 WILD-TYPE     47    105    123    100     91
D792V10, multiclass
        clus
vv       CASKIN2 MUTATED CASKIN2 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               7               123
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(793) Variable = IFI27L2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFI27L2 MUTATED        0      0      2      1
  IFI27L2 WILD-TYPE    135     92    170    175
D793V1, multiclass
        clus
vv       IFI27L2 MUTATED IFI27L2 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               1               175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IFI27L2 MUTATED        1      1      0
  IFI27L2 WILD-TYPE    214    154    162
D793V2, multiclass
[1] "Remove cluster labels:" "IFI27L2 MUTATED"       
clus
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                2               530 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7716        TCGA-BR-7717        TCGA-BR-7722        TCGA-BR-7723 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7851        TCGA-BR-7901        TCGA-BR-7957        TCGA-BR-7958 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7959        TCGA-BR-8058        TCGA-BR-8059        TCGA-BR-8060 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8077        TCGA-BR-8078        TCGA-BR-8080        TCGA-BR-8081 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8373 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8380        TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8483        TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8589        TCGA-BR-8590 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8686        TCGA-BR-8687        TCGA-BR-8690 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A44T        TCGA-BR-A44U        TCGA-BR-A452        TCGA-BR-A453 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4CQ        TCGA-BR-A4CR        TCGA-BR-A4CS        TCGA-BR-A4IU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4IV        TCGA-BR-A4IY        TCGA-BR-A4IZ        TCGA-BR-A4J1 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4J2        TCGA-BR-A4J4        TCGA-BR-A4J5        TCGA-BR-A4J6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4PE 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4PF        TCGA-BR-A4QI        TCGA-BR-A4QL        TCGA-BR-A4QM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5798        TCGA-CD-5799        TCGA-CD-5800        TCGA-CD-5801 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5802        TCGA-CD-5803        TCGA-CD-5804        TCGA-CD-5813 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8524        TCGA-CD-8525        TCGA-CD-8526        TCGA-CD-8527 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8528        TCGA-CD-8529        TCGA-CD-8530        TCGA-CD-8531 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534        TCGA-CD-8535 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487        TCGA-CD-A489 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A48A        TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A4MI        TCGA-CD-A4MJ        TCGA-CG-4437        TCGA-CG-4441 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8576        TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX        TCGA-D7-A4YY 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4Z0        TCGA-D7-A6ET        TCGA-D7-A6EV        TCGA-D7-A6EX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A6F2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A747        TCGA-D7-A748        TCGA-D7-A74A        TCGA-D7-A74B 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-EQ-5647        TCGA-EQ-8122        TCGA-EQ-A4SO        TCGA-F1-6177 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448        TCGA-F1-A72C 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7916        TCGA-FP-7998 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-8099        TCGA-FP-8209        TCGA-FP-8210        TCGA-FP-8211 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-8631        TCGA-FP-A4BE        TCGA-FP-A4BF        TCGA-FP-A8CX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HF-A5NB        TCGA-HJ-7597 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-8238        TCGA-HU-8243        TCGA-HU-8244        TCGA-HU-8249 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-8610 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4G2        TCGA-HU-A4G3        TCGA-HU-A4G6        TCGA-HU-A4G8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4G9        TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GP 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GQ        TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GY        TCGA-HU-A4H0        TCGA-HU-A4H2        TCGA-HU-A4H3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4HB        TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3YA        TCGA-IG-A3YB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A97H        TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-8462        TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A6RL        TCGA-IN-A6RN        TCGA-IN-A6RO        TCGA-IN-A6RP 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR        TCGA-IN-A7NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X        TCGA-IP-7968 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB        TCGA-JY-A6FD 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH        TCGA-JY-A938 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D        TCGA-JY-A93E 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93G 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-KB-A93J        TCGA-KH-A6WC        TCGA-L5-A43C        TCGA-L5-A43E 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J        TCGA-L5-A43M 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG        TCGA-L5-A4OH 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OI        TCGA-L5-A4OJ        TCGA-L5-A4OM        TCGA-L5-A4ON 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T        TCGA-L5-A88V 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z        TCGA-L5-A891 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF        TCGA-L5-A8NG 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN        TCGA-L5-A8NQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT        TCGA-L5-A8NU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A7HX        TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A8I0        TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A9FQ        TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-MX-A5UJ        TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R5-A7ZI        TCGA-R5-A7ZR        TCGA-R5-A804        TCGA-R5-A805 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A6DN        TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A6L6        TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WC        TCGA-R6-A8WG 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW        TCGA-RD-A7C1 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0        TCGA-RD-A8N1 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8N2        TCGA-RD-A8N4        TCGA-RD-A8N5        TCGA-RD-A8N6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-V5-A7RE        TCGA-V5-AASV        TCGA-V5-AASW        TCGA-V5-AASX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8DL        TCGA-VQ-A8DT        TCGA-VQ-A8DU        TCGA-VQ-A8DV 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8DZ        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFI27L2 MUTATED        0      1      1      0
  IFI27L2 WILD-TYPE    135    123    124     60
D793V3, multiclass
[1] "Remove cluster labels:" "IFI27L2 MUTATED"       
clus
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                2               442 
       TCGA-2H-A9GF        TCGA-2H-A9GI        TCGA-2H-A9GL        TCGA-2H-A9GQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GR        TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-A5TJ        TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4183 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4184        TCGA-BR-4187        TCGA-BR-4188        TCGA-BR-4191 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4201        TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4257        TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4292        TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368        TCGA-BR-4369 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452        TCGA-BR-6453 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6564        TCGA-BR-6565        TCGA-BR-6566 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707        TCGA-BR-6709 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802        TCGA-BR-6803 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197        TCGA-BR-7703 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7704        TCGA-BR-7715        TCGA-BR-7716        TCGA-BR-7717 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7722        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8080        TCGA-BR-8081 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8380 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486        TCGA-BR-8588 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8589        TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8676        TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8680        TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2        TCGA-BR-A4J4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7        TCGA-BR-A4J8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF        TCGA-BR-A4QI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4300        TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4306        TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4455        TCGA-CG-4460        TCGA-CG-4465        TCGA-CG-4466 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5723 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6527 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8578 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A748 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-EQ-8122        TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-F1-6875        TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7916 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-7998        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HF-A5NB        TCGA-HJ-7597 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4GF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GQ        TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GY        TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4H5        TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3YA        TCGA-IG-A3YB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A8O2        TCGA-IG-A97H 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RL        TCGA-IN-A6RN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A939 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A93G 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88W        TCGA-L5-A891        TCGA-L5-A8NE 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NF        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NQ        TCGA-L5-A8NS        TCGA-L5-A8NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HW        TCGA-LN-A7HX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-Q9-A6FU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-VQ-A8DL        TCGA-VQ-A8DT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA64        TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA6F        TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6K 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8Q7 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-AA4D        TCGA-VR-AA7B        TCGA-X8-AAAR        TCGA-XP-A8T6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-XP-A8T7        TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Z6-AAPN        TCGA-ZA-A8F6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IFI27L2 MUTATED        2      0      0
  IFI27L2 WILD-TYPE    251    102     89
D793V4, multiclass
[1] "Remove cluster labels:" "IFI27L2 MUTATED"       
clus
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                2               442 
       TCGA-2H-A9GF        TCGA-2H-A9GI        TCGA-2H-A9GL        TCGA-2H-A9GQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GR        TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-A5TJ        TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4183 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4184        TCGA-BR-4187        TCGA-BR-4188        TCGA-BR-4191 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4201        TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4257        TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4292        TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368        TCGA-BR-4369 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452        TCGA-BR-6453 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6564        TCGA-BR-6565        TCGA-BR-6566 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707        TCGA-BR-6709 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802        TCGA-BR-6803 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197        TCGA-BR-7703 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7704        TCGA-BR-7715        TCGA-BR-7716        TCGA-BR-7717 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7722        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8080        TCGA-BR-8081 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8380 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486        TCGA-BR-8588 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8589        TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8676        TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8680        TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2        TCGA-BR-A4J4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7        TCGA-BR-A4J8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF        TCGA-BR-A4QI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4300        TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4306        TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4455        TCGA-CG-4460        TCGA-CG-4465        TCGA-CG-4466 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5723 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6527 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8578 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A748 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-EQ-8122        TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-F1-6875        TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7916 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-7998        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HF-A5NB        TCGA-HJ-7597 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4GF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GQ        TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GY        TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4H5        TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3I8        TCGA-IG-A3QL        TCGA-IG-A3YA        TCGA-IG-A3YB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A8O2        TCGA-IG-A97H 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RL        TCGA-IN-A6RN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A939 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A93G 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88W        TCGA-L5-A891        TCGA-L5-A8NE 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NF        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NQ        TCGA-L5-A8NS        TCGA-L5-A8NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HW        TCGA-LN-A7HX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-Q9-A6FU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-VQ-A8DL        TCGA-VQ-A8DT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA64        TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA6F        TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6K 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8Q7 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-AA4D        TCGA-VR-AA7B        TCGA-X8-AAAR        TCGA-XP-A8T6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-XP-A8T7        TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Z6-AAPN        TCGA-ZA-A8F6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IFI27L2 MUTATED        1      2      0
  IFI27L2 WILD-TYPE    163    245    143
D793V5, multiclass
        clus
vv       IFI27L2 MUTATED IFI27L2 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI27L2 MUTATED        0      1      1      1      0
  IFI27L2 WILD-TYPE    121    103     90    120    117
D793V6, multiclass
        clus
vv       IFI27L2 MUTATED IFI27L2 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               1                90
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IFI27L2 MUTATED        1      2      0
  IFI27L2 WILD-TYPE    158    249    165
D793V7, multiclass
        clus
vv       IFI27L2 MUTATED IFI27L2 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               2               249
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI27L2 MUTATED        0      1      1      1      0
  IFI27L2 WILD-TYPE    118    130    150     93     81
D793V8, multiclass
        clus
vv       IFI27L2 MUTATED IFI27L2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI27L2 MUTATED        0      1      0      1      0
  IFI27L2 WILD-TYPE    118    135    115     39     71
D793V9, multiclass
[1] "Remove cluster labels:" "IFI27L2 MUTATED"       
clus
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                2               478 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7717        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077        TCGA-BR-8078 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8080        TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8370        TCGA-BR-8371 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8372        TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8485 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8590 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J5        TCGA-BR-A4J6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4QI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8529        TCGA-CD-8530 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A489        TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A4MI        TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-4449 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YV        TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6ET 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY        TCGA-D7-A6EZ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747        TCGA-D7-A748 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A74A        TCGA-D7-A74B        TCGA-EQ-5647        TCGA-EQ-8122 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7998        TCGA-FP-8099 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-8209        TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-A4BE        TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HU-8238        TCGA-HU-8243 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-A4G3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4G8        TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4HB        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A6RN        TCGA-IN-A6RP        TCGA-IN-A7NR        TCGA-IN-A7NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X        TCGA-IP-7968 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB        TCGA-JY-A6FD 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH        TCGA-JY-A938 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D        TCGA-JY-A93E 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93J        TCGA-KH-A6WC 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NG        TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NK        TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NQ        TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NU        TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L7-A6VZ        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49W        TCGA-LN-A49X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8        TCGA-LN-A4A9 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5        TCGA-LN-A5U6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW        TCGA-LN-A7HX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-MX-A5UJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU        TCGA-Q9-A6FW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF        TCGA-R5-A7ZI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R5-A7ZR        TCGA-R5-A804        TCGA-R5-A805        TCGA-R6-A6DN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2        TCGA-R6-A8W5 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A8W8        TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N5        TCGA-RD-A8N6        TCGA-RD-A8N9 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW        TCGA-SW-A7EA 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC        TCGA-V5-A7RE 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-V5-AASW        TCGA-V5-AASX        TCGA-VQ-A8DL        TCGA-VQ-A8DU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8DV        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI27L2 MUTATED        0      1      0      0      1
  IFI27L2 WILD-TYPE     48    108    130    101     91
D793V10, multiclass
[1] "Remove cluster labels:" "IFI27L2 MUTATED"       
clus
  IFI27L2 MUTATED IFI27L2 WILD-TYPE 
                2               478 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7717        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077        TCGA-BR-8078 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8080        TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8370        TCGA-BR-8371 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8372        TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8485 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8590 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J5        TCGA-BR-A4J6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4QI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8529        TCGA-CD-8530 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A489        TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CD-A4MI        TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-4449 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A4YV        TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6ET 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY        TCGA-D7-A6EZ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747        TCGA-D7-A748 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-D7-A74A        TCGA-D7-A74B        TCGA-EQ-5647        TCGA-EQ-8122 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7998        TCGA-FP-8099 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-8209        TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-FP-A4BE        TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HU-8238        TCGA-HU-8243 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-A4G3 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4G8        TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-HU-A4HB        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A6RN        TCGA-IN-A6RP        TCGA-IN-A7NR        TCGA-IN-A7NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X        TCGA-IP-7968 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB        TCGA-JY-A6FD 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH        TCGA-JY-A938 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D        TCGA-JY-A93E 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93J        TCGA-KH-A6WC 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NG        TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NK        TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NQ        TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L5-A8NU        TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-L7-A6VZ        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49W        TCGA-LN-A49X 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A4 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8        TCGA-LN-A4A9 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5        TCGA-LN-A5U6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW        TCGA-LN-A7HX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-MX-A5UJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU        TCGA-Q9-A6FW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF        TCGA-R5-A7ZI 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R5-A7ZR        TCGA-R5-A804        TCGA-R5-A805        TCGA-R6-A6DN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2        TCGA-R6-A8W5 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-R6-A8W8        TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BW 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N5        TCGA-RD-A8N6        TCGA-RD-A8N9 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW        TCGA-SW-A7EA 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC        TCGA-V5-A7RE 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-V5-AASW        TCGA-V5-AASX        TCGA-VQ-A8DL        TCGA-VQ-A8DU 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8DV        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"IFI27L2 WILD-TYPE" "IFI27L2 WILD-TYPE" 

Clustering(794) Variable = PKN3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKN3 MUTATED        1      0      1     15
  PKN3 WILD-TYPE    134     92    171    161
D794V1, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN3 MUTATED       10      2      3
  PKN3 WILD-TYPE    205    153    159
D794V2, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKN3 MUTATED        3      8      0      2
  PKN3 WILD-TYPE    132    116    125     58
D794V3, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            8            116
  CLUS_3            0            125
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN3 MUTATED       11      1      1
  PKN3 WILD-TYPE    242    101     88
D794V4, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1           11            242
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN3 MUTATED        3      8      4
  PKN3 WILD-TYPE    161    239    139
D794V5, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN3 MUTATED        1      2      6      2      4
  PKN3 WILD-TYPE    120    102     85    119    113
D794V6, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKN3 MUTATED        3     11      3
  PKN3 WILD-TYPE    156    240    162
D794V7, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           11            240
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN3 MUTATED        1      6      8      1      1
  PKN3 WILD-TYPE    117    125    143     93     80
D794V8, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            125
  CLUS_3            8            143
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN3 MUTATED        2      5      2      0      6
  PKN3 WILD-TYPE    116    131    113     40     65
D794V9, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKN3 MUTATED        0      7      5      2      1
  PKN3 WILD-TYPE     48    102    125     99     91
D794V10, multiclass
        clus
vv       PKN3 MUTATED PKN3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            7            102
  CLUS_3            5            125
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(795) Variable = GPR160 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR160 MUTATED        0      0      1      7
  GPR160 WILD-TYPE    135     92    171    169
D795V1, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR160 MUTATED        2      2      1
  GPR160 WILD-TYPE    213    153    161
D795V2, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              2              213
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR160 MUTATED        4      4      0      0
  GPR160 WILD-TYPE    131    120    125     60
D795V3, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR160 MUTATED        6      2      0
  GPR160 WILD-TYPE    247    100     89
D795V4, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR160 MUTATED        1      3      2
  GPR160 WILD-TYPE    163    244    141
D795V5, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR160 MUTATED        1      3      1      0      1
  GPR160 WILD-TYPE    120    101     90    121    116
D795V6, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR160 MUTATED        0      5      3
  GPR160 WILD-TYPE    159    246    162
D795V7, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR160 MUTATED        1      2      4      0      1
  GPR160 WILD-TYPE    117    129    147     94     80
D795V8, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR160 MUTATED        0      1      1      1      2
  GPR160 WILD-TYPE    118    135    114     39     69
D795V9, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR160 MUTATED        2      1      1      1      0
  GPR160 WILD-TYPE     46    108    129    100     92
D795V10, multiclass
        clus
vv       GPR160 MUTATED GPR160 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              1              108
  CLUS_3              1              129
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(796) Variable = OTUD7B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OTUD7B MUTATED        0      4      2     11
  OTUD7B WILD-TYPE    135     88    170    165
D796V1, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              0              135
  CLUS_2              4               88
  CLUS_3              2              170
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OTUD7B MUTATED       10      2      1
  OTUD7B WILD-TYPE    205    153    161
D796V2, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1             10              205
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OTUD7B MUTATED        4      6      3      0
  OTUD7B WILD-TYPE    131    118    122     60
D796V3, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              4              131
  CLUS_2              6              118
  CLUS_3              3              122
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OTUD7B MUTATED        7      3      3
  OTUD7B WILD-TYPE    246     99     86
D796V4, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              7              246
  CLUS_2              3               99
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OTUD7B MUTATED        4     10      3
  OTUD7B WILD-TYPE    160    237    140
D796V5, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              4              160
  CLUS_2             10              237
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTUD7B MUTATED        1      5      6      3      2
  OTUD7B WILD-TYPE    120     99     85    118    115
D796V6, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              6               85
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OTUD7B MUTATED        3     11      3
  OTUD7B WILD-TYPE    156    240    162
D796V7, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              3              156
  CLUS_2             11              240
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTUD7B MUTATED        2      7      4      3      1
  OTUD7B WILD-TYPE    116    124    147     91     80
D796V8, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              124
  CLUS_3              4              147
  CLUS_4              3               91
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTUD7B MUTATED        2      6      2      0      2
  OTUD7B WILD-TYPE    116    130    113     40     69
D796V9, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OTUD7B MUTATED        0      5      4      0      3
  OTUD7B WILD-TYPE     48    104    126    101     89
D796V10, multiclass
        clus
vv       OTUD7B MUTATED OTUD7B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(797) Variable = ICAM4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ICAM4 MUTATED        1      0      1      6
  ICAM4 WILD-TYPE    134     92    171    170
D797V1, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM4 MUTATED        4      1      1
  ICAM4 WILD-TYPE    211    154    161
D797V2, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ICAM4 MUTATED        2      4      0      0
  ICAM4 WILD-TYPE    133    120    125     60
D797V3, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM4 MUTATED        2      4      0
  ICAM4 WILD-TYPE    251     98     89
D797V4, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM4 MUTATED        2      4      1
  ICAM4 WILD-TYPE    162    243    142
D797V5, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM4 MUTATED        0      2      3      0      2
  ICAM4 WILD-TYPE    121    102     88    121    115
D797V6, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM4 MUTATED        2      2      4
  ICAM4 WILD-TYPE    157    249    161
D797V7, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             2             249
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM4 MUTATED        3      2      1      0      2
  ICAM4 WILD-TYPE    115    129    150     94     79
D797V8, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             2             129
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM4 MUTATED        0      1      2      0      2
  ICAM4 WILD-TYPE    118    135    113     40     69
D797V9, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM4 MUTATED        0      1      1      3      0
  ICAM4 WILD-TYPE     48    108    129     98     92
D797V10, multiclass
        clus
vv       ICAM4 MUTATED ICAM4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(798) Variable = ZNF174 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF174 MUTATED        0      1      1      6
  ZNF174 WILD-TYPE    135     91    171    170
D798V1, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF174 MUTATED        5      2      0
  ZNF174 WILD-TYPE    210    153    162
D798V2, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              2              153
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF174 MUTATED        3      1      2      0
  ZNF174 WILD-TYPE    132    123    123     60
D798V3, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1              123
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF174 MUTATED        4      0      2
  ZNF174 WILD-TYPE    249    102     87
D798V4, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              0              102
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF174 MUTATED        1      6      1
  ZNF174 WILD-TYPE    163    241    142
D798V5, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF174 MUTATED        0      5      1      1      1
  ZNF174 WILD-TYPE    121     99     90    120    116
D798V6, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              5               99
  CLUS_3              1               90
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF174 MUTATED        0      5      3
  ZNF174 WILD-TYPE    159    246    162
D798V7, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF174 MUTATED        2      1      4      1      0
  ZNF174 WILD-TYPE    116    130    147     93     81
D798V8, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              1              130
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF174 MUTATED        0      4      2      0      1
  ZNF174 WILD-TYPE    118    132    113     40     70
D798V9, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF174 MUTATED        0      3      2      1      1
  ZNF174 WILD-TYPE     48    106    128    100     91
D798V10, multiclass
        clus
vv       ZNF174 MUTATED ZNF174 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(799) Variable = POMGNT1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POMGNT1 MUTATED        2      2      1      7
  POMGNT1 WILD-TYPE    133     90    171    169
D799V1, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POMGNT1 MUTATED        8      0      2
  POMGNT1 WILD-TYPE    207    155    160
D799V2, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POMGNT1 MUTATED        3      2      0      3
  POMGNT1 WILD-TYPE    132    122    125     57
D799V3, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POMGNT1 MUTATED        7      1      0
  POMGNT1 WILD-TYPE    246    101     89
D799V4, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POMGNT1 MUTATED        1      9      1
  POMGNT1 WILD-TYPE    163    238    142
D799V5, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POMGNT1 MUTATED        1      3      6      1      0
  POMGNT1 WILD-TYPE    120    101     85    120    117
D799V6, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POMGNT1 MUTATED        2      9      1
  POMGNT1 WILD-TYPE    157    242    164
D799V7, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               9               242
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POMGNT1 MUTATED        1      6      4      0      1
  POMGNT1 WILD-TYPE    117    125    147     94     80
D799V8, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POMGNT1 MUTATED        1      2      1      1      3
  POMGNT1 WILD-TYPE    117    134    114     39     68
D799V9, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POMGNT1 MUTATED        0      4      3      1      0
  POMGNT1 WILD-TYPE     48    105    127    100     92
D799V10, multiclass
        clus
vv       POMGNT1 MUTATED POMGNT1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(800) Variable = MEN1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MEN1 MUTATED        1      0      1      8
  MEN1 WILD-TYPE    134     92    171    168
D800V1, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MEN1 MUTATED        5      0      3
  MEN1 WILD-TYPE    210    155    159
D800V2, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MEN1 MUTATED        3      4      0      1
  MEN1 WILD-TYPE    132    120    125     59
D800V3, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MEN1 MUTATED        5      3      0
  MEN1 WILD-TYPE    248     99     89
D800V4, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MEN1 MUTATED        1      7      2
  MEN1 WILD-TYPE    163    240    141
D800V5, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            7            240
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MEN1 MUTATED        1      3      4      1      1
  MEN1 WILD-TYPE    120    101     87    120    116
D800V6, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MEN1 MUTATED        0      8      2
  MEN1 WILD-TYPE    159    243    163
D800V7, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MEN1 MUTATED        0      5      5      0      0
  MEN1 WILD-TYPE    118    126    146     94     81
D800V8, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MEN1 MUTATED        0      5      1      0      2
  MEN1 WILD-TYPE    118    131    114     40     69
D800V9, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MEN1 MUTATED        0      3      4      1      0
  MEN1 WILD-TYPE     48    106    126    100     92
D800V10, multiclass
        clus
vv       MEN1 MUTATED MEN1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(801) Variable = MIA3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MIA3 MUTATED        5      5      4     15
  MIA3 WILD-TYPE    130     87    168    161
D801V1, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            5             87
  CLUS_3            4            168
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA3 MUTATED       16      6      2
  MIA3 WILD-TYPE    199    149    160
D801V2, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1           16            199
  CLUS_2            6            149
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MIA3 MUTATED        9     11      4      2
  MIA3 WILD-TYPE    126    113    121     58
D801V3, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            9            126
  CLUS_2           11            113
  CLUS_3            4            121
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA3 MUTATED       17      8      1
  MIA3 WILD-TYPE    236     94     88
D801V4, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1           17            236
  CLUS_2            8             94
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA3 MUTATED        7     15      3
  MIA3 WILD-TYPE    157    232    140
D801V5, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            7            157
  CLUS_2           15            232
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA3 MUTATED        3      3     12      3      4
  MIA3 WILD-TYPE    118    101     79    118    113
D801V6, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3           12             79
  CLUS_4            3            118
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MIA3 MUTATED        7     18      4
  MIA3 WILD-TYPE    152    233    161
D801V7, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            7            152
  CLUS_2           18            233
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA3 MUTATED        4     11     10      4      0
  MIA3 WILD-TYPE    114    120    141     90     81
D801V8, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            4            114
  CLUS_2           11            120
  CLUS_3           10            141
  CLUS_4            4             90
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA3 MUTATED        5      6      1      4      5
  MIA3 WILD-TYPE    113    130    114     36     66
D801V9, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            6            130
  CLUS_3            1            114
  CLUS_4            4             36
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MIA3 MUTATED        2      8      5      2      4
  MIA3 WILD-TYPE     46    101    125     99     88
D801V10, multiclass
        clus
vv       MIA3 MUTATED MIA3 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            8            101
  CLUS_3            5            125
  CLUS_4            2             99
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(802) Variable = SRP72 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRP72 MUTATED        1      1      1     13
  SRP72 WILD-TYPE    134     91    171    163
D802V1, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP72 MUTATED        7      1      4
  SRP72 WILD-TYPE    208    154    158
D802V2, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRP72 MUTATED        6      2      4      1
  SRP72 WILD-TYPE    129    122    121     59
D802V3, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             2             122
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP72 MUTATED        7      4      2
  SRP72 WILD-TYPE    246     98     87
D802V4, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP72 MUTATED        2      7      7
  SRP72 WILD-TYPE    162    240    136
D802V5, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP72 MUTATED        2      3      5      1      5
  SRP72 WILD-TYPE    119    101     86    120    112
D802V6, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP72 MUTATED        2      8      6
  SRP72 WILD-TYPE    157    243    159
D802V7, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             8             243
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP72 MUTATED        2      3      6      1      4
  SRP72 WILD-TYPE    116    128    145     93     77
D802V8, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP72 MUTATED        1      3      4      3      1
  SRP72 WILD-TYPE    117    133    111     37     70
D802V9, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             4             111
  CLUS_4             3              37
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP72 MUTATED        0      1      5      5      1
  SRP72 WILD-TYPE     48    108    125     96     91
D802V10, multiclass
        clus
vv       SRP72 MUTATED SRP72 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             5             125
  CLUS_4             5              96
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(803) Variable = UVRAG MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UVRAG MUTATED        2      0      0     11
  UVRAG WILD-TYPE    133     92    172    165
D803V1, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UVRAG MUTATED        6      0      2
  UVRAG WILD-TYPE    209    155    160
D803V2, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UVRAG MUTATED        3      8      0      2
  UVRAG WILD-TYPE    132    116    125     58
D803V3, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             3             132
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UVRAG MUTATED        7      6      0
  UVRAG WILD-TYPE    246     96     89
D803V4, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             7             246
  CLUS_2             6              96
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UVRAG MUTATED        1      6      5
  UVRAG WILD-TYPE    163    241    138
D803V5, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UVRAG MUTATED        1      1      6      0      4
  UVRAG WILD-TYPE    120    103     85    121    113
D803V6, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UVRAG MUTATED        0      9      4
  UVRAG WILD-TYPE    159    242    161
D803V7, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             0             159
  CLUS_2             9             242
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UVRAG MUTATED        1      2     10      0      0
  UVRAG WILD-TYPE    117    129    141     94     81
D803V8, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3            10             141
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UVRAG MUTATED        0      2      1      0      5
  UVRAG WILD-TYPE    118    134    114     40     66
D803V9, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UVRAG MUTATED        0      2      6      0      0
  UVRAG WILD-TYPE     48    107    124    101     92
D803V10, multiclass
        clus
vv       UVRAG MUTATED UVRAG WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(804) Variable = PLXNB2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNB2 MUTATED        3      3      7     17
  PLXNB2 WILD-TYPE    132     89    165    159
D804V1, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3               89
  CLUS_3              7              165
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB2 MUTATED       15      6      5
  PLXNB2 WILD-TYPE    200    149    157
D804V2, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              6              149
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNB2 MUTATED        8      9      4      3
  PLXNB2 WILD-TYPE    127    115    121     57
D804V3, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              9              115
  CLUS_3              4              121
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB2 MUTATED       17      3      4
  PLXNB2 WILD-TYPE    236     99     85
D804V4, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1             17              236
  CLUS_2              3               99
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB2 MUTATED       10     14      5
  PLXNB2 WILD-TYPE    154    233    138
D804V5, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1             10              154
  CLUS_2             14              233
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB2 MUTATED        3      5     10      7      4
  PLXNB2 WILD-TYPE    118     99     81    114    113
D804V6, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              5               99
  CLUS_3             10               81
  CLUS_4              7              114
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB2 MUTATED       10     15      6
  PLXNB2 WILD-TYPE    149    236    159
D804V7, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1             10              149
  CLUS_2             15              236
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB2 MUTATED        3     14      4      6      4
  PLXNB2 WILD-TYPE    115    117    147     88     77
D804V8, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             14              117
  CLUS_3              4              147
  CLUS_4              6               88
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB2 MUTATED        7      7      4      1      3
  PLXNB2 WILD-TYPE    111    129    111     39     68
D804V9, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              7              129
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB2 MUTATED        2      7      4      3      6
  PLXNB2 WILD-TYPE     46    102    126     98     86
D804V10, multiclass
        clus
vv       PLXNB2 MUTATED PLXNB2 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              7              102
  CLUS_3              4              126
  CLUS_4              3               98
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(805) Variable = KIF2B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF2B MUTATED        8      6      6     15
  KIF2B WILD-TYPE    127     86    166    161
D805V1, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             8             127
  CLUS_2             6              86
  CLUS_3             6             166
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF2B MUTATED       14      8     11
  KIF2B WILD-TYPE    201    147    151
D805V2, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1            14             201
  CLUS_2             8             147
  CLUS_3            11             151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF2B MUTATED        9     11      3      5
  KIF2B WILD-TYPE    126    113    122     55
D805V3, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             9             126
  CLUS_2            11             113
  CLUS_3             3             122
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF2B MUTATED       17      8      3
  KIF2B WILD-TYPE    236     94     86
D805V4, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1            17             236
  CLUS_2             8              94
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF2B MUTATED        4     22      8
  KIF2B WILD-TYPE    160    225    135
D805V5, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             4             160
  CLUS_2            22             225
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF2B MUTATED        6      9      9      3      7
  KIF2B WILD-TYPE    115     95     82    118    110
D805V6, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             6             115
  CLUS_2             9              95
  CLUS_3             9              82
  CLUS_4             3             118
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF2B MUTATED        6     22      7
  KIF2B WILD-TYPE    153    229    158
D805V7, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             6             153
  CLUS_2            22             229
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF2B MUTATED        8      8     14      2      3
  KIF2B WILD-TYPE    110    123    137     92     78
D805V8, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             8             110
  CLUS_2             8             123
  CLUS_3            14             137
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF2B MUTATED        3     12      5      3      6
  KIF2B WILD-TYPE    115    124    110     37     65
D805V9, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             3             115
  CLUS_2            12             124
  CLUS_3             5             110
  CLUS_4             3              37
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF2B MUTATED        2      6     12      7      2
  KIF2B WILD-TYPE     46    103    118     94     90
D805V10, multiclass
        clus
vv       KIF2B MUTATED KIF2B WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3            12             118
  CLUS_4             7              94
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(806) Variable = HNF1B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HNF1B MUTATED        1      0      0      4
  HNF1B WILD-TYPE    134     92    172    172
D806V1, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HNF1B MUTATED        4      0      0
  HNF1B WILD-TYPE    211    155    162
D806V2, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HNF1B MUTATED        1      3      1      0
  HNF1B WILD-TYPE    134    121    124     60
D806V3, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HNF1B MUTATED        3      1      1
  HNF1B WILD-TYPE    250    101     88
D806V4, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             3             250
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HNF1B MUTATED        1      3      1
  HNF1B WILD-TYPE    163    244    142
D806V5, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HNF1B MUTATED        1      0      3      0      1
  HNF1B WILD-TYPE    120    104     88    121    116
D806V6, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HNF1B MUTATED        1      4      0
  HNF1B WILD-TYPE    158    247    165
D806V7, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             1             158
  CLUS_2             4             247
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HNF1B MUTATED        0      2      2      1      0
  HNF1B WILD-TYPE    118    129    149     93     81
D806V8, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HNF1B MUTATED        0      1      0      2      1
  HNF1B WILD-TYPE    118    135    115     38     70
D806V9, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HNF1B MUTATED        0      2      1      0      1
  HNF1B WILD-TYPE     48    107    129    101     91
D806V10, multiclass
        clus
vv       HNF1B MUTATED HNF1B WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(807) Variable = CEP290 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP290 MUTATED        5      2      8      8
  CEP290 WILD-TYPE    130     90    164    168
D807V1, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              2               90
  CLUS_3              8              164
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP290 MUTATED       12     10      0
  CEP290 WILD-TYPE    203    145    162
D807V2, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1             12              203
  CLUS_2             10              145
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP290 MUTATED        7      6      6      3
  CEP290 WILD-TYPE    128    118    119     57
D807V3, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              6              118
  CLUS_3              6              119
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP290 MUTATED       14      3      5
  CEP290 WILD-TYPE    239     99     84
D807V4, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1             14              239
  CLUS_2              3               99
  CLUS_3              5               84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP290 MUTATED        8     10      4
  CEP290 WILD-TYPE    156    237    139
D807V5, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              8              156
  CLUS_2             10              237
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP290 MUTATED        4      2      8      6      2
  CEP290 WILD-TYPE    117    102     83    115    115
D807V6, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              2              102
  CLUS_3              8               83
  CLUS_4              6              115
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP290 MUTATED       10     11      2
  CEP290 WILD-TYPE    149    240    163
D807V7, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1             10              149
  CLUS_2             11              240
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP290 MUTATED        4     10      2      6      1
  CEP290 WILD-TYPE    114    121    149     88     80
D807V8, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              4              114
  CLUS_2             10              121
  CLUS_3              2              149
  CLUS_4              6               88
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP290 MUTATED        8      6      2      3      3
  CEP290 WILD-TYPE    110    130    113     37     68
D807V9, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              8              110
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              3               37
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP290 MUTATED        2      8      4      2      6
  CEP290 WILD-TYPE     46    101    126     99     86
D807V10, multiclass
        clus
vv       CEP290 MUTATED CEP290 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              8              101
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              6               86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(808) Variable = COL20A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL20A1 MUTATED        3      2      2     15
  COL20A1 WILD-TYPE    132     90    170    161
D808V1, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4              15               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL20A1 MUTATED       13      3      5
  COL20A1 WILD-TYPE    202    152    157
D808V2, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1              13               202
  CLUS_2               3               152
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL20A1 MUTATED        7      6      1      2
  COL20A1 WILD-TYPE    128    118    124     58
D808V3, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               7               128
  CLUS_2               6               118
  CLUS_3               1               124
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL20A1 MUTATED       12      3      1
  COL20A1 WILD-TYPE    241     99     88
D808V4, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               3                99
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL20A1 MUTATED        5     10      6
  COL20A1 WILD-TYPE    159    237    137
D808V5, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               5               159
  CLUS_2              10               237
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL20A1 MUTATED        2      3      9      2      5
  COL20A1 WILD-TYPE    119    101     82    119    112
D808V6, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3               9                82
  CLUS_4               2               119
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL20A1 MUTATED        5     12      5
  COL20A1 WILD-TYPE    154    239    160
D808V7, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               5               154
  CLUS_2              12               239
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL20A1 MUTATED        2     11      5      1      3
  COL20A1 WILD-TYPE    116    120    146     93     78
D808V8, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2              11               120
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL20A1 MUTATED        4      6      3      3      5
  COL20A1 WILD-TYPE    114    130    112     37     66
D808V9, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               6               130
  CLUS_3               3               112
  CLUS_4               3                37
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL20A1 MUTATED        2      6      7      5      1
  COL20A1 WILD-TYPE     46    103    123     96     91
D808V10, multiclass
        clus
vv       COL20A1 MUTATED COL20A1 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               6               103
  CLUS_3               7               123
  CLUS_4               5                96
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(809) Variable = THSD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THSD1 MUTATED        6      1      2     16
  THSD1 WILD-TYPE    129     91    170    160
D809V1, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THSD1 MUTATED       12      2      7
  THSD1 WILD-TYPE    203    153    155
D809V2, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             2             153
  CLUS_3             7             155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THSD1 MUTATED        3     11      1      3
  THSD1 WILD-TYPE    132    113    124     57
D809V3, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2            11             113
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THSD1 MUTATED       10      6      2
  THSD1 WILD-TYPE    243     96     87
D809V4, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THSD1 MUTATED        5     13      6
  THSD1 WILD-TYPE    159    234    137
D809V5, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            13             234
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THSD1 MUTATED        4      6      8      3      3
  THSD1 WILD-TYPE    117     98     83    118    114
D809V6, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             6              98
  CLUS_3             8              83
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THSD1 MUTATED        5     17      4
  THSD1 WILD-TYPE    154    234    161
D809V7, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            17             234
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THSD1 MUTATED        3      8     12      2      1
  THSD1 WILD-TYPE    115    123    139     92     80
D809V8, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             123
  CLUS_3            12             139
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THSD1 MUTATED        2      8      2      1      8
  THSD1 WILD-TYPE    116    128    113     39     63
D809V9, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THSD1 MUTATED        2      8      8      1      2
  THSD1 WILD-TYPE     46    101    122    100     90
D809V10, multiclass
        clus
vv       THSD1 MUTATED THSD1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             8             101
  CLUS_3             8             122
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(810) Variable = TADA2B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TADA2B MUTATED        2      0      3     10
  TADA2B WILD-TYPE    133     92    169    166
D810V1, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              3              169
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TADA2B MUTATED        7      1      4
  TADA2B WILD-TYPE    208    154    158
D810V2, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              7              208
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TADA2B MUTATED        6      5      1      0
  TADA2B WILD-TYPE    129    119    124     60
D810V3, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              6              129
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TADA2B MUTATED        9      2      1
  TADA2B WILD-TYPE    244    100     88
D810V4, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TADA2B MUTATED        3      9      2
  TADA2B WILD-TYPE    161    238    141
D810V5, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              3              161
  CLUS_2              9              238
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TADA2B MUTATED        1      3      6      3      1
  TADA2B WILD-TYPE    120    101     85    118    116
D810V6, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              6               85
  CLUS_4              3              118
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TADA2B MUTATED        2     10      3
  TADA2B WILD-TYPE    157    241    162
D810V7, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              2              157
  CLUS_2             10              241
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TADA2B MUTATED        0      7      4      3      1
  TADA2B WILD-TYPE    118    124    147     91     80
D810V8, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              124
  CLUS_3              4              147
  CLUS_4              3               91
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TADA2B MUTATED        1      5      2      1      3
  TADA2B WILD-TYPE    117    131    113     39     68
D810V9, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TADA2B MUTATED        0      6      2      1      3
  TADA2B WILD-TYPE     48    103    128    100     89
D810V10, multiclass
        clus
vv       TADA2B MUTATED TADA2B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(811) Variable = HSP90AA1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSP90AA1 MUTATED        1      1      2     10
  HSP90AA1 WILD-TYPE    134     91    170    166
D811V1, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4               10                166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AA1 MUTATED       11      1      2
  HSP90AA1 WILD-TYPE    204    154    160
D811V2, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1               11                204
  CLUS_2                1                154
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSP90AA1 MUTATED        5      5      1      0
  HSP90AA1 WILD-TYPE    130    119    124     60
D811V3, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                5                130
  CLUS_2                5                119
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AA1 MUTATED        5      5      1
  HSP90AA1 WILD-TYPE    248     97     88
D811V4, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                5                 97
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AA1 MUTATED        1      9      3
  HSP90AA1 WILD-TYPE    163    238    140
D811V5, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                9                238
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AA1 MUTATED        2      0      8      1      2
  HSP90AA1 WILD-TYPE    119    104     83    120    115
D811V6, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                0                104
  CLUS_3                8                 83
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AA1 MUTATED        2      9      3
  HSP90AA1 WILD-TYPE    157    242    162
D811V7, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                9                242
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AA1 MUTATED        1      7      3      1      2
  HSP90AA1 WILD-TYPE    117    124    148     93     79
D811V8, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                124
  CLUS_3                3                148
  CLUS_4                1                 93
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AA1 MUTATED        1      2      2      2      4
  HSP90AA1 WILD-TYPE    117    134    113     38     67
D811V9, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                134
  CLUS_3                2                113
  CLUS_4                2                 38
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AA1 MUTATED        0      4      5      1      1
  HSP90AA1 WILD-TYPE     48    105    125    100     91
D811V10, multiclass
        clus
vv       HSP90AA1 MUTATED HSP90AA1 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                4                105
  CLUS_3                5                125
  CLUS_4                1                100
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(812) Variable = CRAT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRAT MUTATED        0      1      3     10
  CRAT WILD-TYPE    135     91    169    166
D812V1, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CRAT MUTATED        5      3      3
  CRAT WILD-TYPE    210    152    159
D812V2, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            5            210
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRAT MUTATED        5      6      0      1
  CRAT WILD-TYPE    130    118    125     59
D812V3, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            5            130
  CLUS_2            6            118
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CRAT MUTATED        7      4      1
  CRAT WILD-TYPE    246     98     88
D812V4, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            7            246
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CRAT MUTATED        1      9      4
  CRAT WILD-TYPE    163    238    139
D812V5, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            1            163
  CLUS_2            9            238
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRAT MUTATED        2      4      3      1      4
  CRAT WILD-TYPE    119    100     88    120    113
D812V6, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            2            119
  CLUS_2            4            100
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CRAT MUTATED        2     11      1
  CRAT WILD-TYPE    157    240    164
D812V7, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            2            157
  CLUS_2           11            240
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRAT MUTATED        2      3      8      1      0
  CRAT WILD-TYPE    116    128    143     93     81
D812V8, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            8            143
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRAT MUTATED        1      4      0      0      4
  CRAT WILD-TYPE    117    132    115     40     67
D812V9, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRAT MUTATED        0      4      4      0      1
  CRAT WILD-TYPE     48    105    126    101     91
D812V10, multiclass
        clus
vv       CRAT MUTATED CRAT WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(813) Variable = MON2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MON2 MUTATED        0      0      5     16
  MON2 WILD-TYPE    135     92    167    160
D813V1, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            5            167
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MON2 MUTATED        9      3      4
  MON2 WILD-TYPE    206    152    158
D813V2, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MON2 MUTATED        8      6      5      0
  MON2 WILD-TYPE    127    118    120     60
D813V3, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            6            118
  CLUS_3            5            120
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MON2 MUTATED       10      5      4
  MON2 WILD-TYPE    243     97     85
D813V4, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            5             97
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MON2 MUTATED        7      7      5
  MON2 WILD-TYPE    157    240    138
D813V5, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            7            157
  CLUS_2            7            240
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MON2 MUTATED        0      4      6      4      5
  MON2 WILD-TYPE    121    100     85    117    112
D813V6, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            4            100
  CLUS_3            6             85
  CLUS_4            4            117
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MON2 MUTATED        4     12      5
  MON2 WILD-TYPE    155    239    160
D813V7, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           12            239
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MON2 MUTATED        0      8      5      4      4
  MON2 WILD-TYPE    118    123    146     90     77
D813V8, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            8            123
  CLUS_3            5            146
  CLUS_4            4             90
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MON2 MUTATED        3      4      2      1      4
  MON2 WILD-TYPE    115    132    113     39     67
D813V9, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MON2 MUTATED        1      4      4      2      3
  MON2 WILD-TYPE     47    105    126     99     89
D813V10, multiclass
        clus
vv       MON2 MUTATED MON2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            2             99
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(814) Variable = ZKSCAN1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZKSCAN1 MUTATED        3      2      1      6
  ZKSCAN1 WILD-TYPE    132     90    171    170
D814V1, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN1 MUTATED        7      0      4
  ZKSCAN1 WILD-TYPE    208    155    158
D814V2, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               0               155
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZKSCAN1 MUTATED        2      4      3      0
  ZKSCAN1 WILD-TYPE    133    120    122     60
D814V3, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               4               120
  CLUS_3               3               122
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN1 MUTATED        4      2      3
  ZKSCAN1 WILD-TYPE    249    100     86
D814V4, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               2               100
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN1 MUTATED        1      5      6
  ZKSCAN1 WILD-TYPE    163    242    137
D814V5, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               5               242
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN1 MUTATED        1      3      2      1      5
  ZKSCAN1 WILD-TYPE    120    101     89    120    112
D814V6, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN1 MUTATED        1      7      4
  ZKSCAN1 WILD-TYPE    158    244    161
D814V7, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               7               244
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN1 MUTATED        4      2      4      1      1
  ZKSCAN1 WILD-TYPE    114    129    147     93     80
D814V8, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               2               129
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN1 MUTATED        1      3      3      0      3
  ZKSCAN1 WILD-TYPE    117    133    112     40     68
D814V9, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN1 MUTATED        0      2      4      3      1
  ZKSCAN1 WILD-TYPE     48    107    126     98     91
D814V10, multiclass
        clus
vv       ZKSCAN1 MUTATED ZKSCAN1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               4               126
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(815) Variable = HAUS6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAUS6 MUTATED        1      0      1     12
  HAUS6 WILD-TYPE    134     92    171    164
D815V1, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS6 MUTATED        9      2      2
  HAUS6 WILD-TYPE    206    153    160
D815V2, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAUS6 MUTATED        6      5      1      2
  HAUS6 WILD-TYPE    129    119    124     58
D815V3, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS6 MUTATED       12      1      1
  HAUS6 WILD-TYPE    241    101     88
D815V4, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS6 MUTATED        3      8      2
  HAUS6 WILD-TYPE    161    239    141
D815V5, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS6 MUTATED        1      4      4      1      3
  HAUS6 WILD-TYPE    120    100     87    120    114
D815V6, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HAUS6 MUTATED        1     10      3
  HAUS6 WILD-TYPE    158    241    162
D815V7, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS6 MUTATED        1      4      7      1      1
  HAUS6 WILD-TYPE    117    127    144     93     80
D815V8, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS6 MUTATED        2      4      1      1      5
  HAUS6 WILD-TYPE    116    132    114     39     66
D815V9, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAUS6 MUTATED        2      2      8      0      1
  HAUS6 WILD-TYPE     46    107    122    101     91
D815V10, multiclass
        clus
vv       HAUS6 MUTATED HAUS6 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             8             122
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(816) Variable = CHRNA4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHRNA4 MUTATED        3      1      3     11
  CHRNA4 WILD-TYPE    132     91    169    165
D816V1, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHRNA4 MUTATED       11      1      4
  CHRNA4 WILD-TYPE    204    154    158
D816V2, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1             11              204
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHRNA4 MUTATED        5      5      4      0
  CHRNA4 WILD-TYPE    130    119    121     60
D816V3, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              5              119
  CLUS_3              4              121
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHRNA4 MUTATED        6      4      4
  CHRNA4 WILD-TYPE    247     98     85
D816V4, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              4               98
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHRNA4 MUTATED        3      8      6
  CHRNA4 WILD-TYPE    161    239    137
D816V5, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              8              239
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHRNA4 MUTATED        1      3      4      2      7
  CHRNA4 WILD-TYPE    120    101     87    119    110
D816V6, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              2              119
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHRNA4 MUTATED        3     10      5
  CHRNA4 WILD-TYPE    156    241    160
D816V7, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             10              241
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHRNA4 MUTATED        1      7      6      1      3
  CHRNA4 WILD-TYPE    117    124    145     93     78
D816V8, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              124
  CLUS_3              6              145
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHRNA4 MUTATED        0      5      4      3      1
  CHRNA4 WILD-TYPE    118    131    111     37     70
D816V9, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              131
  CLUS_3              4              111
  CLUS_4              3               37
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHRNA4 MUTATED        2      5      3      2      1
  CHRNA4 WILD-TYPE     46    104    127     99     91
D816V10, multiclass
        clus
vv       CHRNA4 MUTATED CHRNA4 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              5              104
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(817) Variable = FBXO43 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO43 MUTATED        0      1      3      9
  FBXO43 WILD-TYPE    135     91    169    167
D817V1, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO43 MUTATED        6      4      2
  FBXO43 WILD-TYPE    209    151    160
D817V2, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              4              151
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO43 MUTATED        3      5      1      2
  FBXO43 WILD-TYPE    132    119    124     58
D817V3, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO43 MUTATED        9      1      1
  FBXO43 WILD-TYPE    244    101     88
D817V4, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO43 MUTATED        4      8      1
  FBXO43 WILD-TYPE    160    239    142
D817V5, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              8              239
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO43 MUTATED        1      5      3      3      1
  FBXO43 WILD-TYPE    120     99     88    118    116
D817V6, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              3               88
  CLUS_4              3              118
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO43 MUTATED        4      8      2
  FBXO43 WILD-TYPE    155    243    163
D817V7, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              4              155
  CLUS_2              8              243
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO43 MUTATED        2      5      4      3      0
  FBXO43 WILD-TYPE    116    126    147     91     81
D817V8, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO43 MUTATED        4      4      1      0      2
  FBXO43 WILD-TYPE    114    132    114     40     69
D817V9, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO43 MUTATED        1      4      2      1      3
  FBXO43 WILD-TYPE     47    105    128    100     89
D817V10, multiclass
        clus
vv       FBXO43 MUTATED FBXO43 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(818) Variable = PIK3R1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        4      0      4      8
  PIK3R1 WILD-TYPE    131     92    168    168
D818V1, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              0               92
  CLUS_3              4              168
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED        9      1      4
  PIK3R1 WILD-TYPE    206    154    158
D818V2, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIK3R1 MUTATED        6      1      2      3
  PIK3R1 WILD-TYPE    129    123    123     57
D818V3, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              1              123
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED        9      1      2
  PIK3R1 WILD-TYPE    244    101     87
D818V4, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED        1     12      3
  PIK3R1 WILD-TYPE    163    235    140
D818V5, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2             12              235
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R1 MUTATED        4      2      8      1      1
  PIK3R1 WILD-TYPE    117    102     83    120    116
D818V6, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              2              102
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIK3R1 MUTATED        2     12      2
  PIK3R1 WILD-TYPE    157    239    163
D818V7, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             12              239
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R1 MUTATED        3      8      4      1      0
  PIK3R1 WILD-TYPE    115    123    147     93     81
D818V8, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R1 MUTATED        2      6      1      0      4
  PIK3R1 WILD-TYPE    116    130    114     40     67
D818V9, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIK3R1 MUTATED        2      8      2      0      1
  PIK3R1 WILD-TYPE     46    101    128    101     91
D818V10, multiclass
        clus
vv       PIK3R1 MUTATED PIK3R1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              8              101
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(819) Variable = ZMYND19 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYND19 MUTATED        1      1      2      6
  ZMYND19 WILD-TYPE    134     91    170    170
D819V1, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZMYND19 MUTATED        3      1      4
  ZMYND19 WILD-TYPE    212    154    158
D819V2, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               1               154
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYND19 MUTATED        6      2      0      0
  ZMYND19 WILD-TYPE    129    122    125     60
D819V3, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZMYND19 MUTATED        6      2      0
  ZMYND19 WILD-TYPE    247    100     89
D819V4, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZMYND19 MUTATED        4      4      2
  ZMYND19 WILD-TYPE    160    243    141
D819V5, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND19 MUTATED        1      2      2      2      3
  ZMYND19 WILD-TYPE    120    102     89    119    114
D819V6, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               2               119
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZMYND19 MUTATED        1      5      4
  ZMYND19 WILD-TYPE    158    246    161
D819V7, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               5               246
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND19 MUTATED        1      3      4      2      0
  ZMYND19 WILD-TYPE    117    128    147     92     81
D819V8, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               128
  CLUS_3               4               147
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND19 MUTATED        1      2      2      1      2
  ZMYND19 WILD-TYPE    117    134    113     39     69
D819V9, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND19 MUTATED        0      3      2      1      2
  ZMYND19 WILD-TYPE     48    106    128    100     90
D819V10, multiclass
        clus
vv       ZMYND19 MUTATED ZMYND19 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(820) Variable = DYRK1A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYRK1A MUTATED        1      0      3     12
  DYRK1A WILD-TYPE    134     92    169    164
D820V1, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              3              169
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYRK1A MUTATED       10      3      3
  DYRK1A WILD-TYPE    205    152    159
D820V2, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1             10              205
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DYRK1A MUTATED        6      5      1      2
  DYRK1A WILD-TYPE    129    119    124     58
D820V3, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              6              129
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYRK1A MUTATED       10      3      1
  DYRK1A WILD-TYPE    243     99     88
D820V4, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1             10              243
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYRK1A MUTATED        3     11      2
  DYRK1A WILD-TYPE    161    236    141
D820V5, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              3              161
  CLUS_2             11              236
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK1A MUTATED        2      5      5      2      2
  DYRK1A WILD-TYPE    119     99     86    119    115
D820V6, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              2              119
  CLUS_2              5               99
  CLUS_3              5               86
  CLUS_4              2              119
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DYRK1A MUTATED        2     14      1
  DYRK1A WILD-TYPE    157    237    164
D820V7, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              2              157
  CLUS_2             14              237
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK1A MUTATED        2      7      5      2      1
  DYRK1A WILD-TYPE    116    124    146     92     80
D820V8, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              124
  CLUS_3              5              146
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK1A MUTATED        2      6      1      1      3
  DYRK1A WILD-TYPE    116    130    114     39     68
D820V9, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DYRK1A MUTATED        1      3      6      1      2
  DYRK1A WILD-TYPE     47    106    124    100     90
D820V10, multiclass
        clus
vv       DYRK1A MUTATED DYRK1A WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(821) Variable = KIF6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF6 MUTATED        1      1      5     10
  KIF6 WILD-TYPE    134     91    167    166
D821V1, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            5            167
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KIF6 MUTATED        8      3      4
  KIF6 WILD-TYPE    207    152    158
D821V2, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF6 MUTATED        5      4      4      0
  KIF6 WILD-TYPE    130    120    121     60
D821V3, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            4            120
  CLUS_3            4            121
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KIF6 MUTATED        9      1      3
  KIF6 WILD-TYPE    244    101     86
D821V4, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            1            101
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KIF6 MUTATED        4      9      5
  KIF6 WILD-TYPE    160    238    138
D821V5, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            4            160
  CLUS_2            9            238
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF6 MUTATED        3      2      6      3      4
  KIF6 WILD-TYPE    118    102     85    118    113
D821V6, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            2            102
  CLUS_3            6             85
  CLUS_4            3            118
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  KIF6 MUTATED        3      8      7
  KIF6 WILD-TYPE    156    243    158
D821V7, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            8            243
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF6 MUTATED        2      4      6      2      4
  KIF6 WILD-TYPE    116    127    145     92     77
D821V8, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            6            145
  CLUS_4            2             92
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF6 MUTATED        2      4      7      1      1
  KIF6 WILD-TYPE    116    132    108     39     70
D821V9, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            7            108
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF6 MUTATED        1      4      5      3      2
  KIF6 WILD-TYPE     47    105    125     98     90
D821V10, multiclass
        clus
vv       KIF6 MUTATED KIF6 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            5            125
  CLUS_4            3             98
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(822) Variable = XPO1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XPO1 MUTATED        1      1      3      9
  XPO1 WILD-TYPE    134     91    169    167
D822V1, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XPO1 MUTATED        8      3      2
  XPO1 WILD-TYPE    207    152    160
D822V2, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XPO1 MUTATED        4      4      2      1
  XPO1 WILD-TYPE    131    120    123     59
D822V3, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            4            120
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XPO1 MUTATED        8      2      1
  XPO1 WILD-TYPE    245    100     88
D822V4, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XPO1 MUTATED        6      6      2
  XPO1 WILD-TYPE    158    241    141
D822V5, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            6            158
  CLUS_2            6            241
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XPO1 MUTATED        0      3      4      6      1
  XPO1 WILD-TYPE    121    101     87    115    116
D822V6, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            6            115
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XPO1 MUTATED        4      9      1
  XPO1 WILD-TYPE    155    242    164
D822V7, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            4            155
  CLUS_2            9            242
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XPO1 MUTATED        1      5      4      4      0
  XPO1 WILD-TYPE    117    126    147     90     81
D822V8, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            4            147
  CLUS_4            4             90
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XPO1 MUTATED        2      3      1      5      2
  XPO1 WILD-TYPE    116    133    114     35     69
D822V9, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            5             35
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XPO1 MUTATED        1      3      3      2      4
  XPO1 WILD-TYPE     47    106    127     99     88
D822V10, multiclass
        clus
vv       XPO1 MUTATED XPO1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(823) Variable = WHSC1L1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WHSC1L1 MUTATED        2      3      4     14
  WHSC1L1 WILD-TYPE    133     89    168    162
D823V1, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3                89
  CLUS_3               4               168
  CLUS_4              14               162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  WHSC1L1 MUTATED       11      2      3
  WHSC1L1 WILD-TYPE    204    153    159
D823V2, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               2               153
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WHSC1L1 MUTATED        9      8      1      1
  WHSC1L1 WILD-TYPE    126    116    124     59
D823V3, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               8               116
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  WHSC1L1 MUTATED       12      6      1
  WHSC1L1 WILD-TYPE    241     96     88
D823V4, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               6                96
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  WHSC1L1 MUTATED        4     13      6
  WHSC1L1 WILD-TYPE    160    234    137
D823V5, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               4               160
  CLUS_2              13               234
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WHSC1L1 MUTATED        2      5     10      2      4
  WHSC1L1 WILD-TYPE    119     99     81    119    113
D823V6, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               5                99
  CLUS_3              10                81
  CLUS_4               2               119
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  WHSC1L1 MUTATED        4     14      4
  WHSC1L1 WILD-TYPE    155    237    161
D823V7, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               4               155
  CLUS_2              14               237
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WHSC1L1 MUTATED        2      9      8      2      1
  WHSC1L1 WILD-TYPE    116    122    143     92     80
D823V8, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               9               122
  CLUS_3               8               143
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WHSC1L1 MUTATED        3      6      1      0      3
  WHSC1L1 WILD-TYPE    115    130    114     40     68
D823V9, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               6               130
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WHSC1L1 MUTATED        1      5      5      0      2
  WHSC1L1 WILD-TYPE     47    104    125    101     90
D823V10, multiclass
        clus
vv       WHSC1L1 MUTATED WHSC1L1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               5               125
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(824) Variable = NAA25 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAA25 MUTATED        4      3      3     10
  NAA25 WILD-TYPE    131     89    169    166
D824V1, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA25 MUTATED       10      4      5
  NAA25 WILD-TYPE    205    151    157
D824V2, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             4             151
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAA25 MUTATED        7      9      2      1
  NAA25 WILD-TYPE    128    115    123     59
D824V3, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             9             115
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA25 MUTATED       12      6      1
  NAA25 WILD-TYPE    241     96     88
D824V4, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA25 MUTATED        4      9      6
  NAA25 WILD-TYPE    160    238    137
D824V5, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA25 MUTATED        4      2      7      2      4
  NAA25 WILD-TYPE    117    102     84    119    113
D824V6, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAA25 MUTATED        6     10      4
  NAA25 WILD-TYPE    153    241    161
D824V7, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            10             241
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA25 MUTATED        4      5      6      2      3
  NAA25 WILD-TYPE    114    126    145     92     78
D824V8, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             126
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA25 MUTATED        3      4      2      1      6
  NAA25 WILD-TYPE    115    132    113     39     65
D824V9, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAA25 MUTATED        2      5      4      3      2
  NAA25 WILD-TYPE     46    104    126     98     90
D824V10, multiclass
        clus
vv       NAA25 MUTATED NAA25 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(825) Variable = MANEA MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MANEA MUTATED        2      2      3      8
  MANEA WILD-TYPE    133     90    169    168
D825V1, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MANEA MUTATED        7      4      3
  MANEA WILD-TYPE    208    151    159
D825V2, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             7             208
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MANEA MUTATED        7      2      3      0
  MANEA WILD-TYPE    128    122    122     60
D825V3, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             7             128
  CLUS_2             2             122
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MANEA MUTATED       10      1      1
  MANEA WILD-TYPE    243    101     88
D825V4, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1            10             243
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MANEA MUTATED        4      7      4
  MANEA WILD-TYPE    160    240    139
D825V5, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             4             160
  CLUS_2             7             240
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MANEA MUTATED        1      2      6      3      3
  MANEA WILD-TYPE    120    102     85    118    114
D825V6, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MANEA MUTATED        4     10      1
  MANEA WILD-TYPE    155    241    164
D825V7, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             4             155
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MANEA MUTATED        1      5      5      3      1
  MANEA WILD-TYPE    117    126    146     91     80
D825V8, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MANEA MUTATED        3      5      1      2      1
  MANEA WILD-TYPE    115    131    114     38     70
D825V9, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MANEA MUTATED        1      4      3      2      2
  MANEA WILD-TYPE     47    105    127     99     90
D825V10, multiclass
        clus
vv       MANEA MUTATED MANEA WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(826) Variable = CCR3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCR3 MUTATED        1      1      1     10
  CCR3 WILD-TYPE    134     91    171    166
D826V1, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR3 MUTATED        8      2      1
  CCR3 WILD-TYPE    207    153    161
D826V2, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCR3 MUTATED        6      3      1      0
  CCR3 WILD-TYPE    129    121    124     60
D826V3, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR3 MUTATED        7      2      1
  CCR3 WILD-TYPE    246    100     88
D826V4, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR3 MUTATED        2      8      2
  CCR3 WILD-TYPE    162    239    141
D826V5, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR3 MUTATED        0      3      5      2      2
  CCR3 WILD-TYPE    121    101     86    119    115
D826V6, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR3 MUTATED        3      7      2
  CCR3 WILD-TYPE    156    244    163
D826V7, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            7            244
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR3 MUTATED        0      5      3      2      2
  CCR3 WILD-TYPE    118    126    148     92     79
D826V8, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR3 MUTATED        1      3      1      1      3
  CCR3 WILD-TYPE    117    133    114     39     68
D826V9, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR3 MUTATED        0      3      3      1      2
  CCR3 WILD-TYPE     48    106    127    100     90
D826V10, multiclass
        clus
vv       CCR3 MUTATED CCR3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(827) Variable = HAX1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAX1 MUTATED        0      2      0      5
  HAX1 WILD-TYPE    135     90    172    171
D827V1, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HAX1 MUTATED        5      1      1
  HAX1 WILD-TYPE    210    154    161
D827V2, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAX1 MUTATED        2      0      2      1
  HAX1 WILD-TYPE    133    124    123     59
D827V3, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0            124
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HAX1 MUTATED        4      0      1
  HAX1 WILD-TYPE    249    102     88
D827V4, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HAX1 MUTATED        1      3      3
  HAX1 WILD-TYPE    163    244    140
D827V5, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAX1 MUTATED        0      2      2      1      2
  HAX1 WILD-TYPE    121    102     89    120    115
D827V6, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HAX1 MUTATED        1      4      2
  HAX1 WILD-TYPE    158    247    163
D827V7, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAX1 MUTATED        0      2      3      1      1
  HAX1 WILD-TYPE    118    129    148     93     80
D827V8, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAX1 MUTATED        1      3      1      0      2
  HAX1 WILD-TYPE    117    133    114     40     69
D827V9, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAX1 MUTATED        0      2      4      0      1
  HAX1 WILD-TYPE     48    107    126    101     91
D827V10, multiclass
        clus
vv       HAX1 MUTATED HAX1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(828) Variable = TAF1D MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF1D MUTATED        2      1      1      4
  TAF1D WILD-TYPE    133     91    171    172
D828V1, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1D MUTATED        5      2      1
  TAF1D WILD-TYPE    210    153    161
D828V2, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF1D MUTATED        3      1      1      1
  TAF1D WILD-TYPE    132    123    124     59
D828V3, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1D MUTATED        4      1      1
  TAF1D WILD-TYPE    249    101     88
D828V4, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1D MUTATED        1      5      1
  TAF1D WILD-TYPE    163    242    142
D828V5, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1D MUTATED        1      1      3      1      1
  TAF1D WILD-TYPE    120    103     88    120    116
D828V6, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1D MUTATED        2      4      2
  TAF1D WILD-TYPE    157    247    163
D828V7, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             2             157
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1D MUTATED        1      2      3      1      1
  TAF1D WILD-TYPE    117    129    148     93     80
D828V8, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1D MUTATED        1      1      0      1      3
  TAF1D WILD-TYPE    117    135    115     39     68
D828V9, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1D MUTATED        0      1      3      1      1
  TAF1D WILD-TYPE     48    108    127    100     91
D828V10, multiclass
        clus
vv       TAF1D MUTATED TAF1D WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(829) Variable = KLRF1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLRF1 MUTATED        3      1      1      1
  KLRF1 WILD-TYPE    132     91    171    175
D829V1, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             1             175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRF1 MUTATED        4      2      0
  KLRF1 WILD-TYPE    211    153    162
D829V2, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KLRF1 MUTATED        3      2      1      0
  KLRF1 WILD-TYPE    132    122    124     60
D829V3, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRF1 MUTATED        5      1      0
  KLRF1 WILD-TYPE    248    101     89
D829V4, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRF1 MUTATED        2      4      0
  KLRF1 WILD-TYPE    162    243    143
D829V5, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRF1 MUTATED        1      0      3      2      0
  KLRF1 WILD-TYPE    120    104     88    119    117
D829V6, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KLRF1 MUTATED        2      4      0
  KLRF1 WILD-TYPE    157    247    165
D829V7, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             4             247
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRF1 MUTATED        1      3      0      2      0
  KLRF1 WILD-TYPE    117    128    151     92     81
D829V8, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             0             151
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRF1 MUTATED        2      3      0      0      1
  KLRF1 WILD-TYPE    116    133    115     40     70
D829V9, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KLRF1 MUTATED        0      4      0      0      2
  KLRF1 WILD-TYPE     48    105    130    101     90
D829V10, multiclass
        clus
vv       KLRF1 MUTATED KLRF1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             0             130
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(830) Variable = SPOCD1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPOCD1 MUTATED        0      2      3     12
  SPOCD1 WILD-TYPE    135     90    169    164
D830V1, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPOCD1 MUTATED        5      4      5
  SPOCD1 WILD-TYPE    210    151    157
D830V2, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              4              151
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPOCD1 MUTATED        4      4      1      2
  SPOCD1 WILD-TYPE    131    120    124     58
D830V3, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPOCD1 MUTATED        9      1      1
  SPOCD1 WILD-TYPE    244    101     88
D830V4, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPOCD1 MUTATED        2      7      6
  SPOCD1 WILD-TYPE    162    240    137
D830V5, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPOCD1 MUTATED        1      3      4      2      5
  SPOCD1 WILD-TYPE    120    101     87    119    112
D830V6, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              2              119
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPOCD1 MUTATED        2      9      6
  SPOCD1 WILD-TYPE    157    242    159
D830V7, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              9              242
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPOCD1 MUTATED        2      3      7      2      3
  SPOCD1 WILD-TYPE    116    128    144     92     78
D830V8, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              128
  CLUS_3              7              144
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPOCD1 MUTATED        1      5      3      2      2
  SPOCD1 WILD-TYPE    117    131    112     38     69
D830V9, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPOCD1 MUTATED        0      4      3      4      2
  SPOCD1 WILD-TYPE     48    105    127     97     90
D830V10, multiclass
        clus
vv       SPOCD1 MUTATED SPOCD1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              4               97
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(831) Variable = DAPK1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DAPK1 MUTATED        3      3      5     18
  DAPK1 WILD-TYPE    132     89    167    158
D831V1, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             5             167
  CLUS_4            18             158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DAPK1 MUTATED       19      3      4
  DAPK1 WILD-TYPE    196    152    158
D831V2, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             3             152
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DAPK1 MUTATED       11      4      1      1
  DAPK1 WILD-TYPE    124    120    124     59
D831V3, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DAPK1 MUTATED       14      2      1
  DAPK1 WILD-TYPE    239    100     88
D831V4, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DAPK1 MUTATED        6     19      4
  DAPK1 WILD-TYPE    158    228    139
D831V5, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            19             228
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAPK1 MUTATED        4      8     11      3      3
  DAPK1 WILD-TYPE    117     96     80    118    114
D831V6, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             8              96
  CLUS_3            11              80
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DAPK1 MUTATED        5     19      6
  DAPK1 WILD-TYPE    154    232    159
D831V7, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            19             232
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAPK1 MUTATED        3     14      7      3      3
  DAPK1 WILD-TYPE    115    117    144     91     78
D831V8, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            14             117
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAPK1 MUTATED        4      8      7      1      2
  DAPK1 WILD-TYPE    114    128    108     39     69
D831V9, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             128
  CLUS_3             7             108
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DAPK1 MUTATED        2      8      5      4      3
  DAPK1 WILD-TYPE     46    101    125     97     89
D831V10, multiclass
        clus
vv       DAPK1 MUTATED DAPK1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             8             101
  CLUS_3             5             125
  CLUS_4             4              97
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(832) Variable = SERPING1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        2      2      2      4
  SERPING1 WILD-TYPE    133     90    170    172
D832V1, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                 90
  CLUS_3                2                170
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        5      0      4
  SERPING1 WILD-TYPE    210    155    158
D832V2, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                0                155
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPING1 MUTATED        2      2      4      1
  SERPING1 WILD-TYPE    133    122    121     59
D832V3, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                2                122
  CLUS_3                4                121
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        4      3      2
  SERPING1 WILD-TYPE    249     99     87
D832V4, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                3                 99
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        1      6      3
  SERPING1 WILD-TYPE    163    241    140
D832V5, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                6                241
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPING1 MUTATED        1      2      3      1      3
  SERPING1 WILD-TYPE    120    102     88    120    114
D832V6, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                3                 88
  CLUS_4                1                120
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPING1 MUTATED        2      5      3
  SERPING1 WILD-TYPE    157    246    162
D832V7, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                5                246
  CLUS_3                3                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPING1 MUTATED        2      3      3      1      1
  SERPING1 WILD-TYPE    116    128    148     93     80
D832V8, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                3                128
  CLUS_3                3                148
  CLUS_4                1                 93
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPING1 MUTATED        0      1      1      4      1
  SERPING1 WILD-TYPE    118    135    114     36     70
D832V9, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                1                135
  CLUS_3                1                114
  CLUS_4                4                 36
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPING1 MUTATED        0      2      2      2      1
  SERPING1 WILD-TYPE     48    107    128     99     91
D832V10, multiclass
        clus
vv       SERPING1 MUTATED SERPING1 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                2                128
  CLUS_4                2                 99
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(833) Variable = TMEM165 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM165 MUTATED        0      0      1      4
  TMEM165 WILD-TYPE    135     92    171    172
D833V1, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM165 MUTATED        0      1      2
  TMEM165 WILD-TYPE    215    154    160
D833V2, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               0               215
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM165 MUTATED        2      1      2      0
  TMEM165 WILD-TYPE    133    123    123     60
D833V3, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1               123
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM165 MUTATED        3      0      2
  TMEM165 WILD-TYPE    250    102     87
D833V4, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM165 MUTATED        0      2      2
  TMEM165 WILD-TYPE    164    245    141
D833V5, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               2               245
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM165 MUTATED        1      2      0      0      1
  TMEM165 WILD-TYPE    120    102     91    121    116
D833V6, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               0                91
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM165 MUTATED        0      2      3
  TMEM165 WILD-TYPE    159    249    162
D833V7, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               2               249
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM165 MUTATED        2      1      1      0      1
  TMEM165 WILD-TYPE    116    130    150     94     80
D833V8, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM165 MUTATED        0      1      1      0      1
  TMEM165 WILD-TYPE    118    135    114     40     70
D833V9, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM165 MUTATED        1      1      0      1      0
  TMEM165 WILD-TYPE     47    108    130    100     92
D833V10, multiclass
        clus
vv       TMEM165 MUTATED TMEM165 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(834) Variable = SDC4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SDC4 MUTATED        1      1      1      3
  SDC4 WILD-TYPE    134     91    171    173
D834V1, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SDC4 MUTATED        5      0      0
  SDC4 WILD-TYPE    210    155    162
D834V2, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SDC4 MUTATED        5      0      1      0
  SDC4 WILD-TYPE    130    124    124     60
D834V3, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            0            124
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SDC4 MUTATED        4      0      2
  SDC4 WILD-TYPE    249    102     87
D834V4, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SDC4 MUTATED        1      3      2
  SDC4 WILD-TYPE    163    244    141
D834V5, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDC4 MUTATED        2      0      3      0      1
  SDC4 WILD-TYPE    119    104     88    121    116
D834V6, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SDC4 MUTATED        1      4      1
  SDC4 WILD-TYPE    158    247    164
D834V7, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDC4 MUTATED        1      3      1      0      1
  SDC4 WILD-TYPE    117    128    150     94     80
D834V8, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDC4 MUTATED        0      2      1      0      2
  SDC4 WILD-TYPE    118    134    114     40     69
D834V9, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SDC4 MUTATED        0      1      4      0      0
  SDC4 WILD-TYPE     48    108    126    101     92
D834V10, multiclass
        clus
vv       SDC4 MUTATED SDC4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(835) Variable = TAF1B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF1B MUTATED        1      2      2     10
  TAF1B WILD-TYPE    134     90    170    166
D835V1, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1B MUTATED        7      4      3
  TAF1B WILD-TYPE    208    151    159
D835V2, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             7             208
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF1B MUTATED        3      5      3      1
  TAF1B WILD-TYPE    132    119    122     59
D835V3, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5             119
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1B MUTATED        7      2      3
  TAF1B WILD-TYPE    246    100     86
D835V4, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1B MUTATED        5      7      1
  TAF1B WILD-TYPE    159    240    142
D835V5, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             5             159
  CLUS_2             7             240
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1B MUTATED        2      3      4      3      1
  TAF1B WILD-TYPE    119    101     87    118    116
D835V6, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             4              87
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1B MUTATED        4      8      3
  TAF1B WILD-TYPE    155    243    162
D835V7, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             4             155
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1B MUTATED        1      6      4      3      1
  TAF1B WILD-TYPE    117    125    147     91     80
D835V8, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1B MUTATED        4      5      1      1      2
  TAF1B WILD-TYPE    114    131    114     39     69
D835V9, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1B MUTATED        1      3      3      3      3
  TAF1B WILD-TYPE     47    106    127     98     89
D835V10, multiclass
        clus
vv       TAF1B MUTATED TAF1B WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(836) Variable = ITGAE MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGAE MUTATED        3      0      2     13
  ITGAE WILD-TYPE    132     92    170    163
D836V1, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAE MUTATED       11      3      3
  ITGAE WILD-TYPE    204    152    159
D836V2, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1            11             204
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGAE MUTATED        3      5      3      2
  ITGAE WILD-TYPE    132    119    122     58
D836V3, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5             119
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAE MUTATED        9      2      2
  ITGAE WILD-TYPE    244    100     87
D836V4, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAE MUTATED        1     11      5
  ITGAE WILD-TYPE    163    236    138
D836V5, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             1             163
  CLUS_2            11             236
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAE MUTATED        1      6      6      1      3
  ITGAE WILD-TYPE    120     98     85    120    114
D836V6, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             1             120
  CLUS_2             6              98
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAE MUTATED        1     15      2
  ITGAE WILD-TYPE    158    236    163
D836V7, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             1             158
  CLUS_2            15             236
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAE MUTATED        2      6      8      1      1
  ITGAE WILD-TYPE    116    125    143     93     80
D836V8, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             8             143
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAE MUTATED        1      7      2      1      4
  ITGAE WILD-TYPE    117    129    113     39     67
D836V9, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAE MUTATED        0      8      4      2      1
  ITGAE WILD-TYPE     48    101    126     99     91
D836V10, multiclass
        clus
vv       ITGAE MUTATED ITGAE WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(837) Variable = BIN3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BIN3 MUTATED        0      0      1      4
  BIN3 WILD-TYPE    135     92    171    172
D837V1, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BIN3 MUTATED        4      1      0
  BIN3 WILD-TYPE    211    154    162
D837V2, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BIN3 MUTATED        2      1      0      0
  BIN3 WILD-TYPE    133    123    125     60
D837V3, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BIN3 MUTATED        2      1      0
  BIN3 WILD-TYPE    251    101     89
D837V4, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            2            251
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BIN3 MUTATED        1      3      0
  BIN3 WILD-TYPE    163    244    143
D837V5, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIN3 MUTATED        0      1      2      1      0
  BIN3 WILD-TYPE    121    103     89    120    117
D837V6, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BIN3 MUTATED        1      3      1
  BIN3 WILD-TYPE    158    248    164
D837V7, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIN3 MUTATED        1      2      1      1      0
  BIN3 WILD-TYPE    117    129    150     93     81
D837V8, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            1            150
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIN3 MUTATED        1      1      1      0      1
  BIN3 WILD-TYPE    117    135    114     40     70
D837V9, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIN3 MUTATED        0      1      1      1      1
  BIN3 WILD-TYPE     48    108    129    100     91
D837V10, multiclass
        clus
vv       BIN3 MUTATED BIN3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(838) Variable = TRIOBP MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIOBP MUTATED        4      4      6     23
  TRIOBP WILD-TYPE    131     88    166    153
D838V1, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4               88
  CLUS_3              6              166
  CLUS_4             23              153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIOBP MUTATED       23      6      6
  TRIOBP WILD-TYPE    192    149    156
D838V2, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1             23              192
  CLUS_2              6              149
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TRIOBP MUTATED        8     10      7      3
  TRIOBP WILD-TYPE    127    114    118     57
D838V3, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              8              127
  CLUS_2             10              114
  CLUS_3              7              118
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIOBP MUTATED       17      5      6
  TRIOBP WILD-TYPE    236     97     83
D838V4, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1             17              236
  CLUS_2              5               97
  CLUS_3              6               83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIOBP MUTATED        3     23     10
  TRIOBP WILD-TYPE    161    224    133
D838V5, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              3              161
  CLUS_2             23              224
  CLUS_3             10              133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIOBP MUTATED        5      7     16      2      6
  TRIOBP WILD-TYPE    116     97     75    119    111
D838V6, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              5              116
  CLUS_2              7               97
  CLUS_3             16               75
  CLUS_4              2              119
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TRIOBP MUTATED        5     22     11
  TRIOBP WILD-TYPE    154    229    154
D838V7, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              5              154
  CLUS_2             22              229
  CLUS_3             11              154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIOBP MUTATED        6     14     10      2      6
  TRIOBP WILD-TYPE    112    117    141     92     75
D838V8, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              6              112
  CLUS_2             14              117
  CLUS_3             10              141
  CLUS_4              2               92
  CLUS_5              6               75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIOBP MUTATED        2     11      7      2     10
  TRIOBP WILD-TYPE    116    125    108     38     61
D838V9, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              2              116
  CLUS_2             11              125
  CLUS_3              7              108
  CLUS_4              2               38
  CLUS_5             10               61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TRIOBP MUTATED        3     14     10      3      2
  TRIOBP WILD-TYPE     45     95    120     98     90
D838V10, multiclass
        clus
vv       TRIOBP MUTATED TRIOBP WILD-TYPE
  CLUS_1              3               45
  CLUS_2             14               95
  CLUS_3             10              120
  CLUS_4              3               98
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(839) Variable = BRD1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRD1 MUTATED        1      2      3     15
  BRD1 WILD-TYPE    134     90    169    161
D839V1, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4           15            161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD1 MUTATED       12      3      4
  BRD1 WILD-TYPE    203    152    158
D839V2, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            3            152
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRD1 MUTATED        5      8      3      1
  BRD1 WILD-TYPE    130    116    122     59
D839V3, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            8            116
  CLUS_3            3            122
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD1 MUTATED        9      6      2
  BRD1 WILD-TYPE    244     96     87
D839V4, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            6             96
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD1 MUTATED        2     15      5
  BRD1 WILD-TYPE    162    232    138
D839V5, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2           15            232
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD1 MUTATED        4      4      9      1      4
  BRD1 WILD-TYPE    117    100     82    120    113
D839V6, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            4            100
  CLUS_3            9             82
  CLUS_4            1            120
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BRD1 MUTATED        3     16      3
  BRD1 WILD-TYPE    156    235    162
D839V7, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           16            235
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD1 MUTATED        3      9      7      1      2
  BRD1 WILD-TYPE    115    122    144     93     79
D839V8, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            9            122
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD1 MUTATED        3      7      1      1      5
  BRD1 WILD-TYPE    115    129    114     39     66
D839V9, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            7            129
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRD1 MUTATED        2      6      6      2      1
  BRD1 WILD-TYPE     46    103    124     99     91
D839V10, multiclass
        clus
vv       BRD1 MUTATED BRD1 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3            6            124
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(840) Variable = ITPR2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITPR2 MUTATED        4      7      5     19
  ITPR2 WILD-TYPE    131     85    167    157
D840V1, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             7              85
  CLUS_3             5             167
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITPR2 MUTATED       18      6      5
  ITPR2 WILD-TYPE    197    149    157
D840V2, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1            18             197
  CLUS_2             6             149
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITPR2 MUTATED        8     10      1      5
  ITPR2 WILD-TYPE    127    114    124     55
D840V3, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             8             127
  CLUS_2            10             114
  CLUS_3             1             124
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITPR2 MUTATED       18      4      2
  ITPR2 WILD-TYPE    235     98     87
D840V4, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1            18             235
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITPR2 MUTATED        6     22      6
  ITPR2 WILD-TYPE    158    225    137
D840V5, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            22             225
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITPR2 MUTATED        3      8     11      4      8
  ITPR2 WILD-TYPE    118     96     80    117    109
D840V6, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             8              96
  CLUS_3            11              80
  CLUS_4             4             117
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITPR2 MUTATED        7     22      6
  ITPR2 WILD-TYPE    152    229    159
D840V7, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            22             229
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITPR2 MUTATED        6     14      9      4      2
  ITPR2 WILD-TYPE    112    117    142     90     79
D840V8, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             6             112
  CLUS_2            14             117
  CLUS_3             9             142
  CLUS_4             4              90
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITPR2 MUTATED        5     10      3      1      7
  ITPR2 WILD-TYPE    113    126    112     39     64
D840V9, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            10             126
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITPR2 MUTATED        3     10      7      2      4
  ITPR2 WILD-TYPE     45     99    123     99     88
D840V10, multiclass
        clus
vv       ITPR2 MUTATED ITPR2 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            10              99
  CLUS_3             7             123
  CLUS_4             2              99
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(841) Variable = DDO MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDO MUTATED        1      3      0      3
  DDO WILD-TYPE    134     89    172    173
D841V1, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           1           134
  CLUS_2           3            89
  CLUS_3           0           172
  CLUS_4           3           173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDO MUTATED        3      2      0
  DDO WILD-TYPE    212    153    162
D841V2, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           3           212
  CLUS_2           2           153
  CLUS_3           0           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDO MUTATED        1      4      0      1
  DDO WILD-TYPE    134    120    125     59
D841V3, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           1           134
  CLUS_2           4           120
  CLUS_3           0           125
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDO MUTATED        4      2      0
  DDO WILD-TYPE    249    100     89
D841V4, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           4           249
  CLUS_2           2           100
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDO MUTATED        0      4      3
  DDO WILD-TYPE    164    243    140
D841V5, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           0           164
  CLUS_2           4           243
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDO MUTATED        0      3      2      0      2
  DDO WILD-TYPE    121    101     89    121    115
D841V6, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           0           121
  CLUS_2           3           101
  CLUS_3           2            89
  CLUS_4           0           121
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DDO MUTATED        1      5      1
  DDO WILD-TYPE    158    246    164
D841V7, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           1           158
  CLUS_2           5           246
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDO MUTATED        2      0      4      0      1
  DDO WILD-TYPE    116    131    147     94     80
D841V8, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           2           116
  CLUS_2           0           131
  CLUS_3           4           147
  CLUS_4           0            94
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDO MUTATED        1      2      1      0      1
  DDO WILD-TYPE    117    134    114     40     70
D841V9, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           1           117
  CLUS_2           2           134
  CLUS_3           1           114
  CLUS_4           0            40
  CLUS_5           1            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDO MUTATED        0      3      1      1      0
  DDO WILD-TYPE     48    106    129    100     92
D841V10, multiclass
        clus
vv       DDO MUTATED DDO WILD-TYPE
  CLUS_1           0            48
  CLUS_2           3           106
  CLUS_3           1           129
  CLUS_4           1           100
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(842) Variable = ZNF295 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF295 MUTATED        0      3      1     15
  ZNF295 WILD-TYPE    135     89    171    161
D842V1, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              3               89
  CLUS_3              1              171
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF295 MUTATED       10      1      3
  ZNF295 WILD-TYPE    205    154    159
D842V2, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF295 MUTATED        6      9      1      2
  ZNF295 WILD-TYPE    129    115    124     58
D842V3, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              9              115
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF295 MUTATED       11      5      2
  ZNF295 WILD-TYPE    242     97     87
D842V4, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              5               97
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF295 MUTATED        1      9      6
  ZNF295 WILD-TYPE    163    238    137
D842V5, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              9              238
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF295 MUTATED        2      4      5      0      5
  ZNF295 WILD-TYPE    119    100     86    121    112
D842V6, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF295 MUTATED        1     14      4
  ZNF295 WILD-TYPE    158    237    161
D842V7, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             14              237
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF295 MUTATED        2      4     10      0      3
  ZNF295 WILD-TYPE    116    127    141     94     78
D842V8, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3             10              141
  CLUS_4              0               94
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF295 MUTATED        0      4      1      2      7
  ZNF295 WILD-TYPE    118    132    114     38     64
D842V9, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF295 MUTATED        0      3      9      2      0
  ZNF295 WILD-TYPE     48    106    121     99     92
D842V10, multiclass
        clus
vv       ZNF295 MUTATED ZNF295 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              9              121
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(843) Variable = FOXQ1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FOXQ1 MUTATED        0      0      0      3
  FOXQ1 WILD-TYPE    135     92    172    173
D843V1, multiclass
        clus
vv       FOXQ1 MUTATED FOXQ1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXQ1 MUTATED        2      0      0
  FOXQ1 WILD-TYPE    213    155    162
D843V2, multiclass
[1] "Remove cluster labels:" "FOXQ1 MUTATED"         
clus
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              2             530 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8368      TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8372      TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8484 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8487      TCGA-BR-8588 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CD-A4MJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-5716      TCGA-CG-5717 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527      TCGA-D7-6528 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8573 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YX      TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A6EV      TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A6F0      TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A74A      TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7735      TCGA-FP-7829 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-7916      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-A4BF      TCGA-FP-A8CX      TCGA-FP-A9TM      TCGA-HF-7131 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134      TCGA-HF-7136 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8238      TCGA-HU-8243 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8244      TCGA-HU-8249      TCGA-HU-8602      TCGA-HU-8604 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4G2      TCGA-HU-A4G3 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4G6      TCGA-HU-A4G8      TCGA-HU-A4G9      TCGA-HU-A4GC 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GP      TCGA-HU-A4GQ      TCGA-HU-A4GT 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY      TCGA-HU-A4H0 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-HU-A4HD 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A6QS      TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RO      TCGA-IN-A6RP      TCGA-IN-A6RR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RS      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-JY-A93F 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-KB-A6F5      TCGA-KB-A6F7      TCGA-KB-A93G      TCGA-KB-A93J 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-KH-A6WC      TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43I      TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OF      TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OJ      TCGA-L5-A4OM      TCGA-L5-A4ON      TCGA-L5-A4OO 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR      TCGA-L5-A4OS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW      TCGA-L5-A4OX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V      TCGA-L5-A88W 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891      TCGA-L5-A893 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG      TCGA-L5-A8NH 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK      TCGA-L5-A8NL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ      TCGA-L5-A8NR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU      TCGA-L5-A8NV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ      TCGA-LN-A49K 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N      TCGA-LN-A49O 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S      TCGA-LN-A49U 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3      TCGA-LN-A4A4 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A5U7      TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-MX-A663      TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R5-A7O7      TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R5-A7ZR      TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A6DQ      TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A6XG      TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A8W5      TCGA-R6-A8W8      TCGA-R6-A8WC      TCGA-R6-A8WG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW      TCGA-RD-A7C1 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0      TCGA-RD-A8N1 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8N2      TCGA-RD-A8N4      TCGA-RD-A8N5      TCGA-RD-A8N6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8N9      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-V5-A7RE      TCGA-V5-AASV      TCGA-V5-AASW      TCGA-V5-AASX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8DL      TCGA-VQ-A8DT      TCGA-VQ-A8DU      TCGA-VQ-A8DV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8DZ      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FOXQ1 MUTATED        0      1      0      0
  FOXQ1 WILD-TYPE    135    123    125     60
D843V3, multiclass
[1] "Remove cluster labels:" "FOXQ1 MUTATED"         
clus
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              1             443 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4305      TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-7998      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HF-7134      TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8602      TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A97H      TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-8462      TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-KB-A93G      TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43I      TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OF      TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OJ      TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OR      TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OW      TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NK      TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NT      TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L7-A6VZ      TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49N      TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49S      TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49X      TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A3      TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HX      TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A8I0      TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A9FQ      TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A7BW      TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8N0      TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-S8-A6BW      TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8DT      TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8P2      TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8PM      TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6B      TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6K      TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8Q7      TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Z6-A9VB      TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXQ1 MUTATED        0      1      0
  FOXQ1 WILD-TYPE    253    101     89
D843V4, multiclass
[1] "Remove cluster labels:" "FOXQ1 MUTATED"         
clus
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              1             443 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4305      TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-7998      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HF-7134      TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8602      TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A97H      TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-8462      TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-KB-A93G      TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43I      TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OF      TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OJ      TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OR      TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OW      TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NK      TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NT      TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L7-A6VZ      TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49N      TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49S      TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49X      TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A3      TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HX      TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A8I0      TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A9FQ      TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A7BW      TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8N0      TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-S8-A6BW      TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8DT      TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8P2      TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8PM      TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6B      TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6K      TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8Q7      TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Z6-A9VB      TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXQ1 MUTATED        0      2      1
  FOXQ1 WILD-TYPE    164    245    142
D843V5, multiclass
        clus
vv       FOXQ1 MUTATED FOXQ1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             2             245
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXQ1 MUTATED        0      1      2      0      0
  FOXQ1 WILD-TYPE    121    103     89    121    117
D843V6, multiclass
        clus
vv       FOXQ1 MUTATED FOXQ1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOXQ1 MUTATED        0      3      0
  FOXQ1 WILD-TYPE    159    248    165
D843V7, multiclass
        clus
vv       FOXQ1 MUTATED FOXQ1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXQ1 MUTATED        1      1      1      0      0
  FOXQ1 WILD-TYPE    117    130    150     94     81
D843V8, multiclass
        clus
vv       FOXQ1 MUTATED FOXQ1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             130
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXQ1 MUTATED        0      1      0      0      1
  FOXQ1 WILD-TYPE    118    135    115     40     70
D843V9, multiclass
[1] "Remove cluster labels:" "FOXQ1 MUTATED"         
clus
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7717 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8080      TCGA-BR-8284 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368      TCGA-BR-8369 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8373 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8487 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8687 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452      TCGA-BR-A453 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48C 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CG-4437 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716      TCGA-CG-5717 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527      TCGA-D7-6528 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8574 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578      TCGA-D7-8579 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YY 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177      TCGA-F1-6874 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735      TCGA-FP-7829 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209      TCGA-FP-8210 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE      TCGA-FP-A9TM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOXQ1 MUTATED        0      0      2      0      0
  FOXQ1 WILD-TYPE     48    109    128    101     92
D843V10, multiclass
[1] "Remove cluster labels:" "FOXQ1 MUTATED"         
clus
  FOXQ1 MUTATED FOXQ1 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7717 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8080      TCGA-BR-8284 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368      TCGA-BR-8369 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8373 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8487 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8687 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452      TCGA-BR-A453 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48C 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CG-4437 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716      TCGA-CG-5717 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527      TCGA-D7-6528 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8574 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578      TCGA-D7-8579 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YY 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177      TCGA-F1-6874 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735      TCGA-FP-7829 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209      TCGA-FP-8210 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE      TCGA-FP-A9TM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"FOXQ1 WILD-TYPE" "FOXQ1 WILD-TYPE" 

Clustering(844) Variable = HMMR MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HMMR MUTATED        2      1      2      6
  HMMR WILD-TYPE    133     91    170    170
D844V1, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HMMR MUTATED        5      2      1
  HMMR WILD-TYPE    210    153    161
D844V2, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HMMR MUTATED        6      2      3      0
  HMMR WILD-TYPE    129    122    122     60
D844V3, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            6            129
  CLUS_2            2            122
  CLUS_3            3            122
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HMMR MUTATED        7      1      3
  HMMR WILD-TYPE    246    101     86
D844V4, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            7            246
  CLUS_2            1            101
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HMMR MUTATED        5      2      3
  HMMR WILD-TYPE    159    245    140
D844V5, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            5            159
  CLUS_2            2            245
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMMR MUTATED        2      1      3      2      2
  HMMR WILD-TYPE    119    103     88    119    115
D844V6, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HMMR MUTATED        3      6      2
  HMMR WILD-TYPE    156    245    163
D844V7, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMMR MUTATED        2      1      5      2      1
  HMMR WILD-TYPE    116    130    146     92     80
D844V8, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            130
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMMR MUTATED        2      2      0      2      2
  HMMR WILD-TYPE    116    134    115     38     69
D844V9, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMMR MUTATED        2      1      3      0      2
  HMMR WILD-TYPE     46    108    127    101     90
D844V10, multiclass
        clus
vv       HMMR MUTATED HMMR WILD-TYPE
  CLUS_1            2             46
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(845) Variable = KIAA1609 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1609 MUTATED        0      1      0      7
  KIAA1609 WILD-TYPE    135     91    172    169
D845V1, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                0                172
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1609 MUTATED        6      0      1
  KIAA1609 WILD-TYPE    209    155    161
D845V2, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                6                209
  CLUS_2                0                155
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1609 MUTATED        3      1      1      1
  KIAA1609 WILD-TYPE    132    123    124     59
D845V3, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                1                123
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1609 MUTATED        5      0      1
  KIAA1609 WILD-TYPE    248    102     88
D845V4, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                0                102
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1609 MUTATED        0      5      3
  KIAA1609 WILD-TYPE    164    242    140
D845V5, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                5                242
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1609 MUTATED        0      1      5      0      2
  KIAA1609 WILD-TYPE    121    103     86    121    115
D845V6, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                1                103
  CLUS_3                5                 86
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1609 MUTATED        0      6      2
  KIAA1609 WILD-TYPE    159    245    163
D845V7, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                6                245
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1609 MUTATED        0      4      3      0      1
  KIAA1609 WILD-TYPE    118    127    148     94     80
D845V8, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                127
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1609 MUTATED        0      2      0      0      3
  KIAA1609 WILD-TYPE    118    134    115     40     68
D845V9, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1609 MUTATED        0      2      3      0      0
  KIAA1609 WILD-TYPE     48    107    127    101     92
D845V10, multiclass
        clus
vv       KIAA1609 MUTATED KIAA1609 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(846) Variable = RAB14 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAB14 MUTATED        1      1      0      4
  RAB14 WILD-TYPE    134     91    172    172
D846V1, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB14 MUTATED        3      1      0
  RAB14 WILD-TYPE    212    154    162
D846V2, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAB14 MUTATED        1      5      0      0
  RAB14 WILD-TYPE    134    119    125     60
D846V3, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB14 MUTATED        6      0      0
  RAB14 WILD-TYPE    247    102     89
D846V4, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB14 MUTATED        0      4      1
  RAB14 WILD-TYPE    164    243    142
D846V5, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB14 MUTATED        1      0      3      0      1
  RAB14 WILD-TYPE    120    104     88    121    116
D846V6, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RAB14 MUTATED        0      5      1
  RAB14 WILD-TYPE    159    246    164
D846V7, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB14 MUTATED        1      2      2      0      1
  RAB14 WILD-TYPE    117    129    149     94     80
D846V8, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB14 MUTATED        0      3      1      0      0
  RAB14 WILD-TYPE    118    133    114     40     71
D846V9, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAB14 MUTATED        1      2      0      1      0
  RAB14 WILD-TYPE     47    107    130    100     92
D846V10, multiclass
        clus
vv       RAB14 MUTATED RAB14 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(847) Variable = AP2A2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AP2A2 MUTATED        1      1      3     11
  AP2A2 WILD-TYPE    134     91    169    165
D847V1, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP2A2 MUTATED        9      1      3
  AP2A2 WILD-TYPE    206    154    159
D847V2, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AP2A2 MUTATED        6      6      2      0
  AP2A2 WILD-TYPE    129    118    123     60
D847V3, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP2A2 MUTATED        8      5      1
  AP2A2 WILD-TYPE    245     97     88
D847V4, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             5              97
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP2A2 MUTATED        2      8      6
  AP2A2 WILD-TYPE    162    239    137
D847V5, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP2A2 MUTATED        2      4      4      1      5
  AP2A2 WILD-TYPE    119    100     87    120    112
D847V6, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AP2A2 MUTATED        1      9      6
  AP2A2 WILD-TYPE    158    242    159
D847V7, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP2A2 MUTATED        1      5      5      1      4
  AP2A2 WILD-TYPE    117    126    146     93     77
D847V8, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP2A2 MUTATED        1      3      4      0      1
  AP2A2 WILD-TYPE    117    133    111     40     70
D847V9, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             4             111
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AP2A2 MUTATED        0      2      2      4      1
  AP2A2 WILD-TYPE     48    107    128     97     91
D847V10, multiclass
        clus
vv       AP2A2 MUTATED AP2A2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(848) Variable = KIAA0427 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0427 MUTATED        2      0      0     15
  KIAA0427 WILD-TYPE    133     92    172    161
D848V1, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4               15                161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0427 MUTATED        9      3      0
  KIAA0427 WILD-TYPE    206    152    162
D848V2, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                3                152
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA0427 MUTATED        8      6      0      1
  KIAA0427 WILD-TYPE    127    118    125     59
D848V3, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                8                127
  CLUS_2                6                118
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0427 MUTATED       12      3      0
  KIAA0427 WILD-TYPE    241     99     89
D848V4, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1               12                241
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0427 MUTATED        2     10      3
  KIAA0427 WILD-TYPE    162    237    140
D848V5, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                2                162
  CLUS_2               10                237
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0427 MUTATED        3      4      7      0      1
  KIAA0427 WILD-TYPE    118    100     84    121    116
D848V6, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                4                100
  CLUS_3                7                 84
  CLUS_4                0                121
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA0427 MUTATED        1     15      1
  KIAA0427 WILD-TYPE    158    236    164
D848V7, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                1                158
  CLUS_2               15                236
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0427 MUTATED        3      5      9      0      0
  KIAA0427 WILD-TYPE    115    126    142     94     81
D848V8, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                5                126
  CLUS_3                9                142
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0427 MUTATED        0      4      1      0      7
  KIAA0427 WILD-TYPE    118    132    114     40     64
D848V9, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                132
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                7                 64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA0427 MUTATED        2      4      5      1      0
  KIAA0427 WILD-TYPE     46    105    125    100     92
D848V10, multiclass
        clus
vv       KIAA0427 MUTATED KIAA0427 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                4                105
  CLUS_3                5                125
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(849) Variable = CACNA1A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1A MUTATED        9      4      9     17
  CACNA1A WILD-TYPE    126     88    163    159
D849V1, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1               9               126
  CLUS_2               4                88
  CLUS_3               9               163
  CLUS_4              17               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1A MUTATED       17     10      5
  CACNA1A WILD-TYPE    198    145    157
D849V2, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1              17               198
  CLUS_2              10               145
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1A MUTATED        8     13      4      5
  CACNA1A WILD-TYPE    127    111    121     55
D849V3, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1               8               127
  CLUS_2              13               111
  CLUS_3               4               121
  CLUS_4               5                55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1A MUTATED       20      7      3
  CACNA1A WILD-TYPE    233     95     86
D849V4, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1              20               233
  CLUS_2               7                95
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1A MUTATED       12     17      9
  CACNA1A WILD-TYPE    152    230    134
D849V5, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1              12               152
  CLUS_2              17               230
  CLUS_3               9               134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1A MUTATED        8      6     11      6      7
  CACNA1A WILD-TYPE    113     98     80    115    110
D849V6, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1               8               113
  CLUS_2               6                98
  CLUS_3              11                80
  CLUS_4               6               115
  CLUS_5               7               110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1A MUTATED       12     20      7
  CACNA1A WILD-TYPE    147    231    158
D849V7, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1              12               147
  CLUS_2              20               231
  CLUS_3               7               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1A MUTATED        6     15     11      6      1
  CACNA1A WILD-TYPE    112    116    140     88     80
D849V8, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1               6               112
  CLUS_2              15               116
  CLUS_3              11               140
  CLUS_4               6                88
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1A MUTATED        8      8      4      6      6
  CACNA1A WILD-TYPE    110    128    111     34     65
D849V9, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1               8               110
  CLUS_2               8               128
  CLUS_3               4               111
  CLUS_4               6                34
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1A MUTATED        3     10     10      3      6
  CACNA1A WILD-TYPE     45     99    120     98     86
D849V10, multiclass
        clus
vv       CACNA1A MUTATED CACNA1A WILD-TYPE
  CLUS_1               3                45
  CLUS_2              10                99
  CLUS_3              10               120
  CLUS_4               3                98
  CLUS_5               6                86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(850) Variable = DCLRE1A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DCLRE1A MUTATED        3      4      4      5
  DCLRE1A WILD-TYPE    132     88    168    171
D850V1, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               3               132
  CLUS_2               4                88
  CLUS_3               4               168
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DCLRE1A MUTATED       10      3      3
  DCLRE1A WILD-TYPE    205    152    159
D850V2, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1              10               205
  CLUS_2               3               152
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DCLRE1A MUTATED        3      5      2      3
  DCLRE1A WILD-TYPE    132    119    123     57
D850V3, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               3               132
  CLUS_2               5               119
  CLUS_3               2               123
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DCLRE1A MUTATED        8      3      2
  DCLRE1A WILD-TYPE    245     99     87
D850V4, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               8               245
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DCLRE1A MUTATED        1     12      2
  DCLRE1A WILD-TYPE    163    235    141
D850V5, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               1               163
  CLUS_2              12               235
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DCLRE1A MUTATED        4      7      3      1      0
  DCLRE1A WILD-TYPE    117     97     88    120    117
D850V6, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               4               117
  CLUS_2               7                97
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  DCLRE1A MUTATED        1     12      3
  DCLRE1A WILD-TYPE    158    239    162
D850V7, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               1               158
  CLUS_2              12               239
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DCLRE1A MUTATED        4      7      4      1      0
  DCLRE1A WILD-TYPE    114    124    147     93     81
D850V8, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               4               114
  CLUS_2               7               124
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DCLRE1A MUTATED        1      7      3      1      3
  DCLRE1A WILD-TYPE    117    129    112     39     68
D850V9, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               7               129
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DCLRE1A MUTATED        2      4      7      1      1
  DCLRE1A WILD-TYPE     46    105    123    100     91
D850V10, multiclass
        clus
vv       DCLRE1A MUTATED DCLRE1A WILD-TYPE
  CLUS_1               2                46
  CLUS_2               4               105
  CLUS_3               7               123
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(851) Variable = ZNF570 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF570 MUTATED        1      5      5      8
  ZNF570 WILD-TYPE    134     87    167    168
D851V1, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              5               87
  CLUS_3              5              167
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF570 MUTATED       10      4      3
  ZNF570 WILD-TYPE    205    151    159
D851V2, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              4              151
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF570 MUTATED        8      5      2      0
  ZNF570 WILD-TYPE    127    119    123     60
D851V3, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              5              119
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF570 MUTATED       10      2      3
  ZNF570 WILD-TYPE    243    100     86
D851V4, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              2              100
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF570 MUTATED        7      7      4
  ZNF570 WILD-TYPE    157    240    139
D851V5, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              7              157
  CLUS_2              7              240
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF570 MUTATED        2      4      5      3      4
  ZNF570 WILD-TYPE    119    100     86    118    113
D851V6, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3              5               86
  CLUS_4              3              118
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF570 MUTATED        4     11      4
  ZNF570 WILD-TYPE    155    240    161
D851V7, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             11              240
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF570 MUTATED        1      6      7      4      1
  ZNF570 WILD-TYPE    117    125    144     90     80
D851V8, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              7              144
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF570 MUTATED        4      4      2      1      3
  ZNF570 WILD-TYPE    114    132    113     39     68
D851V9, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF570 MUTATED        2      4      3      1      4
  ZNF570 WILD-TYPE     46    105    127    100     88
D851V10, multiclass
        clus
vv       ZNF570 MUTATED ZNF570 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(852) Variable = HAPLN1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAPLN1 MUTATED        1      2      0      6
  HAPLN1 WILD-TYPE    134     90    172    170
D852V1, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HAPLN1 MUTATED        6      0      1
  HAPLN1 WILD-TYPE    209    155    161
D852V2, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HAPLN1 MUTATED        1      5      1      1
  HAPLN1 WILD-TYPE    134    119    124     59
D852V3, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HAPLN1 MUTATED        4      3      1
  HAPLN1 WILD-TYPE    249     99     88
D852V4, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HAPLN1 MUTATED        0      7      2
  HAPLN1 WILD-TYPE    164    240    141
D852V5, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              7              240
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAPLN1 MUTATED        1      1      6      0      1
  HAPLN1 WILD-TYPE    120    103     85    121    116
D852V6, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              6               85
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HAPLN1 MUTATED        1      6      2
  HAPLN1 WILD-TYPE    158    245    163
D852V7, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAPLN1 MUTATED        2      3      3      0      1
  HAPLN1 WILD-TYPE    116    128    148     94     80
D852V8, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAPLN1 MUTATED        0      1      2      0      4
  HAPLN1 WILD-TYPE    118    135    113     40     67
D852V9, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HAPLN1 MUTATED        0      3      3      1      0
  HAPLN1 WILD-TYPE     48    106    127    100     92
D852V10, multiclass
        clus
vv       HAPLN1 MUTATED HAPLN1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(853) Variable = N4BP2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  N4BP2 MUTATED        3      3      3     11
  N4BP2 WILD-TYPE    132     89    169    165
D853V1, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  N4BP2 MUTATED       10      5      0
  N4BP2 WILD-TYPE    205    150    162
D853V2, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             5             150
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  N4BP2 MUTATED        8      4      4      1
  N4BP2 WILD-TYPE    127    120    121     59
D853V3, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             4             120
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  N4BP2 MUTATED       12      4      1
  N4BP2 WILD-TYPE    241     98     88
D853V4, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  N4BP2 MUTATED        7      9      3
  N4BP2 WILD-TYPE    157    238    140
D853V5, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             7             157
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  N4BP2 MUTATED        2      4      7      3      3
  N4BP2 WILD-TYPE    119    100     84    118    114
D853V6, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  N4BP2 MUTATED        5     13      1
  N4BP2 WILD-TYPE    154    238    164
D853V7, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            13             238
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  N4BP2 MUTATED        0     10      6      3      0
  N4BP2 WILD-TYPE    118    121    145     91     81
D853V8, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2            10             121
  CLUS_3             6             145
  CLUS_4             3              91
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  N4BP2 MUTATED        4      2      1      1      4
  N4BP2 WILD-TYPE    114    134    114     39     67
D853V9, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  N4BP2 MUTATED        1      3      4      1      3
  N4BP2 WILD-TYPE     47    106    126    100     89
D853V10, multiclass
        clus
vv       N4BP2 MUTATED N4BP2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(854) Variable = IPP MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IPP MUTATED        3      3      1      2
  IPP WILD-TYPE    132     89    171    174
D854V1, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           3           132
  CLUS_2           3            89
  CLUS_3           1           171
  CLUS_4           2           174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IPP MUTATED        3      4      2
  IPP WILD-TYPE    212    151    160
D854V2, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           3           212
  CLUS_2           4           151
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IPP MUTATED        2      3      1      1
  IPP WILD-TYPE    133    121    124     59
D854V3, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           2           133
  CLUS_2           3           121
  CLUS_3           1           124
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IPP MUTATED        4      3      0
  IPP WILD-TYPE    249     99     89
D854V4, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           4           249
  CLUS_2           3            99
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IPP MUTATED        4      4      1
  IPP WILD-TYPE    160    243    142
D854V5, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           4           160
  CLUS_2           4           243
  CLUS_3           1           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPP MUTATED        2      1      2      2      2
  IPP WILD-TYPE    119    103     89    119    115
D854V6, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           2           119
  CLUS_2           1           103
  CLUS_3           2            89
  CLUS_4           2           119
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  IPP MUTATED        5      2      2
  IPP WILD-TYPE    154    249    163
D854V7, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           5           154
  CLUS_2           2           249
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPP MUTATED        3      2      2      2      0
  IPP WILD-TYPE    115    129    149     92     81
D854V8, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           3           115
  CLUS_2           2           129
  CLUS_3           2           149
  CLUS_4           2            92
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPP MUTATED        3      2      0      2      2
  IPP WILD-TYPE    115    134    115     38     69
D854V9, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           3           115
  CLUS_2           2           134
  CLUS_3           0           115
  CLUS_4           2            38
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IPP MUTATED        2      3      2      0      2
  IPP WILD-TYPE     46    106    128    101     90
D854V10, multiclass
        clus
vv       IPP MUTATED IPP WILD-TYPE
  CLUS_1           2            46
  CLUS_2           3           106
  CLUS_3           2           128
  CLUS_4           0           101
  CLUS_5           2            90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(855) Variable = CD6 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD6 MUTATED        2      0      3      7
  CD6 WILD-TYPE    133     92    169    169
D855V1, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           2           133
  CLUS_2           0            92
  CLUS_3           3           169
  CLUS_4           7           169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD6 MUTATED        5      3      3
  CD6 WILD-TYPE    210    152    159
D855V2, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           5           210
  CLUS_2           3           152
  CLUS_3           3           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CD6 MUTATED        6      2      0      2
  CD6 WILD-TYPE    129    122    125     58
D855V3, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           6           129
  CLUS_2           2           122
  CLUS_3           0           125
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD6 MUTATED        9      1      0
  CD6 WILD-TYPE    244    101     89
D855V4, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           9           244
  CLUS_2           1           101
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD6 MUTATED        2      6      4
  CD6 WILD-TYPE    162    241    139
D855V5, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           2           162
  CLUS_2           6           241
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD6 MUTATED        1      2      6      2      1
  CD6 WILD-TYPE    120    102     85    119    116
D855V6, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           1           120
  CLUS_2           2           102
  CLUS_3           6            85
  CLUS_4           2           119
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CD6 MUTATED        2      9      1
  CD6 WILD-TYPE    157    242    164
D855V7, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           2           157
  CLUS_2           9           242
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD6 MUTATED        0      5      5      1      1
  CD6 WILD-TYPE    118    126    146     93     80
D855V8, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           0           118
  CLUS_2           5           126
  CLUS_3           5           146
  CLUS_4           1            93
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD6 MUTATED        1      4      0      1      3
  CD6 WILD-TYPE    117    132    115     39     68
D855V9, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           1           117
  CLUS_2           4           132
  CLUS_3           0           115
  CLUS_4           1            39
  CLUS_5           3            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CD6 MUTATED        0      5      3      0      1
  CD6 WILD-TYPE     48    104    127    101     91
D855V10, multiclass
        clus
vv       CD6 MUTATED CD6 WILD-TYPE
  CLUS_1           0            48
  CLUS_2           5           104
  CLUS_3           3           127
  CLUS_4           0           101
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(856) Variable = ATP6V1H MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP6V1H MUTATED        0      2      5      9
  ATP6V1H WILD-TYPE    135     90    167    167
D856V1, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               5               167
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATP6V1H MUTATED       10      1      3
  ATP6V1H WILD-TYPE    205    154    159
D856V2, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1              10               205
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP6V1H MUTATED        2      7      4      1
  ATP6V1H WILD-TYPE    133    117    121     59
D856V3, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               2               133
  CLUS_2               7               117
  CLUS_3               4               121
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATP6V1H MUTATED        9      2      3
  ATP6V1H WILD-TYPE    244    100     86
D856V4, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               9               244
  CLUS_2               2               100
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATP6V1H MUTATED        4      5      6
  ATP6V1H WILD-TYPE    160    242    137
D856V5, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               4               160
  CLUS_2               5               242
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1H MUTATED        3      2      5      1      4
  ATP6V1H WILD-TYPE    118    102     86    120    113
D856V6, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               3               118
  CLUS_2               2               102
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ATP6V1H MUTATED        3     10      3
  ATP6V1H WILD-TYPE    156    241    162
D856V7, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               3               156
  CLUS_2              10               241
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1H MUTATED        0      8      4      1      3
  ATP6V1H WILD-TYPE    118    123    147     93     78
D856V8, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               0               118
  CLUS_2               8               123
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1H MUTATED        2      6      2      1      1
  ATP6V1H WILD-TYPE    116    130    113     39     70
D856V9, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               2               116
  CLUS_2               6               130
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP6V1H MUTATED        0      5      4      2      1
  ATP6V1H WILD-TYPE     48    104    126     99     91
D856V10, multiclass
        clus
vv       ATP6V1H MUTATED ATP6V1H WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               4               126
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(857) Variable = PAMR1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAMR1 MUTATED        1      1      7     10
  PAMR1 WILD-TYPE    134     91    165    166
D857V1, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             7             165
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAMR1 MUTATED        5      4      3
  PAMR1 WILD-TYPE    210    151    159
D857V2, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAMR1 MUTATED        9      6      1      1
  PAMR1 WILD-TYPE    126    118    124     59
D857V3, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAMR1 MUTATED       13      3      1
  PAMR1 WILD-TYPE    240     99     88
D857V4, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAMR1 MUTATED        3     12      4
  PAMR1 WILD-TYPE    161    235    139
D857V5, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            12             235
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAMR1 MUTATED        3      3      6      3      4
  PAMR1 WILD-TYPE    118    101     85    118    113
D857V6, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PAMR1 MUTATED        3     13      3
  PAMR1 WILD-TYPE    156    238    162
D857V7, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            13             238
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAMR1 MUTATED        2      7      7      2      1
  PAMR1 WILD-TYPE    116    124    144     92     80
D857V8, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAMR1 MUTATED        2      3      2      1      3
  PAMR1 WILD-TYPE    116    133    113     39     68
D857V9, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAMR1 MUTATED        0      2      6      1      2
  PAMR1 WILD-TYPE     48    107    124    100     90
D857V10, multiclass
        clus
vv       PAMR1 MUTATED PAMR1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(858) Variable = NLRC5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NLRC5 MUTATED        3      4      3     19
  NLRC5 WILD-TYPE    132     88    169    157
D858V1, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             3             169
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NLRC5 MUTATED       12      5      5
  NLRC5 WILD-TYPE    203    150    157
D858V2, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             5             150
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NLRC5 MUTATED        6     11      4      3
  NLRC5 WILD-TYPE    129    113    121     57
D858V3, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             6             129
  CLUS_2            11             113
  CLUS_3             4             121
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NLRC5 MUTATED       13      7      4
  NLRC5 WILD-TYPE    240     95     85
D858V4, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             7              95
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NLRC5 MUTATED        7     14      6
  NLRC5 WILD-TYPE    157    233    137
D858V5, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            14             233
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLRC5 MUTATED        5      2     11      4      5
  NLRC5 WILD-TYPE    116    102     80    117    112
D858V6, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             2             102
  CLUS_3            11              80
  CLUS_4             4             117
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NLRC5 MUTATED        8     14      7
  NLRC5 WILD-TYPE    151    237    158
D858V7, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             8             151
  CLUS_2            14             237
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLRC5 MUTATED        1     11     10      4      3
  NLRC5 WILD-TYPE    117    120    141     90     78
D858V8, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            11             120
  CLUS_3            10             141
  CLUS_4             4              90
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLRC5 MUTATED        4      5      3      3      5
  NLRC5 WILD-TYPE    114    131    112     37     66
D858V9, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             131
  CLUS_3             3             112
  CLUS_4             3              37
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NLRC5 MUTATED        1      4     10      2      3
  NLRC5 WILD-TYPE     47    105    120     99     89
D858V10, multiclass
        clus
vv       NLRC5 MUTATED NLRC5 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3            10             120
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(859) Variable = CST1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CST1 MUTATED        1      2      1      4
  CST1 WILD-TYPE    134     90    171    172
D859V1, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CST1 MUTATED        3      2      2
  CST1 WILD-TYPE    212    153    160
D859V2, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CST1 MUTATED        2      0      2      2
  CST1 WILD-TYPE    133    124    123     58
D859V3, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0            124
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CST1 MUTATED        4      0      2
  CST1 WILD-TYPE    249    102     87
D859V4, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CST1 MUTATED        0      5      3
  CST1 WILD-TYPE    164    242    140
D859V5, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CST1 MUTATED        2      3      0      0      3
  CST1 WILD-TYPE    119    101     91    121    114
D859V6, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            3            101
  CLUS_3            0             91
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CST1 MUTATED        1      4      3
  CST1 WILD-TYPE    158    247    162
D859V7, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CST1 MUTATED        2      3      2      0      1
  CST1 WILD-TYPE    116    128    149     94     80
D859V8, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CST1 MUTATED        0      3      2      0      1
  CST1 WILD-TYPE    118    133    113     40     70
D859V9, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CST1 MUTATED        0      2      3      1      0
  CST1 WILD-TYPE     48    107    127    100     92
D859V10, multiclass
        clus
vv       CST1 MUTATED CST1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(860) Variable = TMEM132D MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM132D MUTATED        9      3      8     23
  TMEM132D WILD-TYPE    126     89    164    153
D860V1, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                9                126
  CLUS_2                3                 89
  CLUS_3                8                164
  CLUS_4               23                153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM132D MUTATED       27      4      9
  TMEM132D WILD-TYPE    188    151    153
D860V2, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1               27                188
  CLUS_2                4                151
  CLUS_3                9                153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM132D MUTATED       12     11     13      3
  TMEM132D WILD-TYPE    123    113    112     57
D860V3, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1               12                123
  CLUS_2               11                113
  CLUS_3               13                112
  CLUS_4                3                 57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM132D MUTATED       22      6     11
  TMEM132D WILD-TYPE    231     96     78
D860V4, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1               22                231
  CLUS_2                6                 96
  CLUS_3               11                 78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM132D MUTATED        6     25     11
  TMEM132D WILD-TYPE    158    222    132
D860V5, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                6                158
  CLUS_2               25                222
  CLUS_3               11                132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM132D MUTATED        6      7     12      6     11
  TMEM132D WILD-TYPE    115     97     79    115    106
D860V6, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                6                115
  CLUS_2                7                 97
  CLUS_3               12                 79
  CLUS_4                6                115
  CLUS_5               11                106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM132D MUTATED        6     24     14
  TMEM132D WILD-TYPE    153    227    151
D860V7, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                6                153
  CLUS_2               24                227
  CLUS_3               14                151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM132D MUTATED        3     16     13      3      9
  TMEM132D WILD-TYPE    115    115    138     91     72
D860V8, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                3                115
  CLUS_2               16                115
  CLUS_3               13                138
  CLUS_4                3                 91
  CLUS_5                9                 72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM132D MUTATED        3     10     10      2     10
  TMEM132D WILD-TYPE    115    126    105     38     61
D860V9, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                3                115
  CLUS_2               10                126
  CLUS_3               10                105
  CLUS_4                2                 38
  CLUS_5               10                 61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM132D MUTATED        0     10     11     11      3
  TMEM132D WILD-TYPE     48     99    119     90     89
D860V10, multiclass
        clus
vv       TMEM132D MUTATED TMEM132D WILD-TYPE
  CLUS_1                0                 48
  CLUS_2               10                 99
  CLUS_3               11                119
  CLUS_4               11                 90
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(861) Variable = XRN1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XRN1 MUTATED        5      2      2     18
  XRN1 WILD-TYPE    130     90    170    158
D861V1, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4           18            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XRN1 MUTATED       12      3      4
  XRN1 WILD-TYPE    203    152    158
D861V2, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            3            152
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XRN1 MUTATED        8      9      2      4
  XRN1 WILD-TYPE    127    115    123     56
D861V3, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            9            115
  CLUS_3            2            123
  CLUS_4            4             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XRN1 MUTATED       15      6      2
  XRN1 WILD-TYPE    238     96     87
D861V4, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1           15            238
  CLUS_2            6             96
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XRN1 MUTATED        5     14      7
  XRN1 WILD-TYPE    159    233    136
D861V5, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            5            159
  CLUS_2           14            233
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRN1 MUTATED        4      9      6      2      5
  XRN1 WILD-TYPE    117     95     85    119    112
D861V6, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            9             95
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  XRN1 MUTATED        4     17      6
  XRN1 WILD-TYPE    155    234    159
D861V7, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           17            234
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRN1 MUTATED        5      8     11      1      2
  XRN1 WILD-TYPE    113    123    140     93     79
D861V8, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            8            123
  CLUS_3           11            140
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRN1 MUTATED        3      2      5      0      6
  XRN1 WILD-TYPE    115    134    110     40     65
D861V9, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            2            134
  CLUS_3            5            110
  CLUS_4            0             40
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRN1 MUTATED        2      3      8      2      1
  XRN1 WILD-TYPE     46    106    122     99     91
D861V10, multiclass
        clus
vv       XRN1 MUTATED XRN1 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            8            122
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(862) Variable = OSBPL9 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSBPL9 MUTATED        1      2      3      6
  OSBPL9 WILD-TYPE    134     90    169    170
D862V1, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OSBPL9 MUTATED        5      3      2
  OSBPL9 WILD-TYPE    210    152    160
D862V2, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OSBPL9 MUTATED        3      3      1      3
  OSBPL9 WILD-TYPE    132    121    124     57
D862V3, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OSBPL9 MUTATED        7      1      2
  OSBPL9 WILD-TYPE    246    101     87
D862V4, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OSBPL9 MUTATED        6      4      2
  OSBPL9 WILD-TYPE    158    243    141
D862V5, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBPL9 MUTATED        2      1      4      3      2
  OSBPL9 WILD-TYPE    119    103     87    118    115
D862V6, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OSBPL9 MUTATED        3      5      4
  OSBPL9 WILD-TYPE    156    246    161
D862V7, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              5              246
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBPL9 MUTATED        2      4      3      3      0
  OSBPL9 WILD-TYPE    116    127    148     91     81
D862V8, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBPL9 MUTATED        2      1      3      1      2
  OSBPL9 WILD-TYPE    116    135    112     39     69
D862V9, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              1              135
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OSBPL9 MUTATED        2      1      3      0      3
  OSBPL9 WILD-TYPE     46    108    127    101     89
D862V10, multiclass
        clus
vv       OSBPL9 MUTATED OSBPL9 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(863) Variable = SYT4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYT4 MUTATED        4      2      2      9
  SYT4 WILD-TYPE    131     90    170    167
D863V1, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYT4 MUTATED        7      3      5
  SYT4 WILD-TYPE    208    152    157
D863V2, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            3            152
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SYT4 MUTATED        3      6      4      1
  SYT4 WILD-TYPE    132    118    121     59
D863V3, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            6            118
  CLUS_3            4            121
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYT4 MUTATED        6      3      5
  SYT4 WILD-TYPE    247     99     84
D863V4, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            3             99
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYT4 MUTATED        4      6      8
  SYT4 WILD-TYPE    160    241    135
D863V5, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            4            160
  CLUS_2            6            241
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYT4 MUTATED        3      3      3      2      7
  SYT4 WILD-TYPE    118    101     88    119    110
D863V6, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SYT4 MUTATED        3      8      7
  SYT4 WILD-TYPE    156    243    158
D863V7, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            8            243
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYT4 MUTATED        2      5      8      1      2
  SYT4 WILD-TYPE    116    126    143     93     79
D863V8, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            8            143
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYT4 MUTATED        2      4      3      2      3
  SYT4 WILD-TYPE    116    132    112     38     68
D863V9, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SYT4 MUTATED        1      5      5      2      1
  SYT4 WILD-TYPE     47    104    125     99     91
D863V10, multiclass
        clus
vv       SYT4 MUTATED SYT4 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            5            125
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(864) Variable = PHF13 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHF13 MUTATED        1      0      1      5
  PHF13 WILD-TYPE    134     92    171    171
D864V1, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PHF13 MUTATED        3      2      1
  PHF13 WILD-TYPE    212    153    161
D864V2, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHF13 MUTATED        3      3      0      0
  PHF13 WILD-TYPE    132    121    125     60
D864V3, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PHF13 MUTATED        4      1      1
  PHF13 WILD-TYPE    249    101     88
D864V4, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PHF13 MUTATED        3      2      1
  PHF13 WILD-TYPE    161    245    142
D864V5, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             2             245
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF13 MUTATED        1      0      3      1      1
  PHF13 WILD-TYPE    120    104     88    120    116
D864V6, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PHF13 MUTATED        2      5      0
  PHF13 WILD-TYPE    157    246    165
D864V7, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             5             246
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF13 MUTATED        1      3      2      1      0
  PHF13 WILD-TYPE    117    128    149     93     81
D864V8, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF13 MUTATED        2      2      0      1      1
  PHF13 WILD-TYPE    116    134    115     39     70
D864V9, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHF13 MUTATED        2      2      1      0      1
  PHF13 WILD-TYPE     46    107    129    101     91
D864V10, multiclass
        clus
vv       PHF13 MUTATED PHF13 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(865) Variable = SMAP2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAP2 MUTATED        1      0      0      4
  SMAP2 WILD-TYPE    134     92    172    172
D865V1, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAP2 MUTATED        2      0      2
  SMAP2 WILD-TYPE    213    155    160
D865V2, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAP2 MUTATED        3      1      0      1
  SMAP2 WILD-TYPE    132    123    125     59
D865V3, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAP2 MUTATED        3      2      0
  SMAP2 WILD-TYPE    250    100     89
D865V4, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAP2 MUTATED        0      4      1
  SMAP2 WILD-TYPE    164    243    142
D865V5, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAP2 MUTATED        0      2      2      0      1
  SMAP2 WILD-TYPE    121    102     89    121    116
D865V6, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAP2 MUTATED        0      4      1
  SMAP2 WILD-TYPE    159    247    164
D865V7, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             4             247
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAP2 MUTATED        0      1      3      0      1
  SMAP2 WILD-TYPE    118    130    148     94     80
D865V8, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAP2 MUTATED        0      1      1      0      2
  SMAP2 WILD-TYPE    118    135    114     40     69
D865V9, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAP2 MUTATED        0      0      3      1      0
  SMAP2 WILD-TYPE     48    109    127    100     92
D865V10, multiclass
        clus
vv       SMAP2 MUTATED SMAP2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             0             109
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(866) Variable = GLYATL2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYATL2 MUTATED        1      3      2      4
  GLYATL2 WILD-TYPE    134     89    170    172
D866V1, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3                89
  CLUS_3               2               170
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GLYATL2 MUTATED        5      2      0
  GLYATL2 WILD-TYPE    210    153    162
D866V2, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               2               153
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLYATL2 MUTATED        3      3      1      1
  GLYATL2 WILD-TYPE    132    121    124     59
D866V3, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GLYATL2 MUTATED        3      3      2
  GLYATL2 WILD-TYPE    250     99     87
D866V4, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GLYATL2 MUTATED        3      3      3
  GLYATL2 WILD-TYPE    161    244    140
D866V5, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               3               244
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYATL2 MUTATED        2      1      2      1      3
  GLYATL2 WILD-TYPE    119    103     89    120    114
D866V6, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GLYATL2 MUTATED        5      4      1
  GLYATL2 WILD-TYPE    154    247    164
D866V7, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               5               154
  CLUS_2               4               247
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYATL2 MUTATED        4      3      2      1      0
  GLYATL2 WILD-TYPE    114    128    149     93     81
D866V8, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               3               128
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYATL2 MUTATED        2      2      1      1      0
  GLYATL2 WILD-TYPE    116    134    114     39     71
D866V9, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLYATL2 MUTATED        1      2      1      1      1
  GLYATL2 WILD-TYPE     47    107    129    100     91
D866V10, multiclass
        clus
vv       GLYATL2 MUTATED GLYATL2 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(867) Variable = C9ORF98 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF98 MUTATED        1      1      1      9
  C9ORF98 WILD-TYPE    134     91    171    167
D867V1, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF98 MUTATED        6      1      2
  C9ORF98 WILD-TYPE    209    154    160
D867V2, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF98 MUTATED        2      5      0      1
  C9ORF98 WILD-TYPE    133    119    125     59
D867V3, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               5               119
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF98 MUTATED        5      3      0
  C9ORF98 WILD-TYPE    248     99     89
D867V4, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF98 MUTATED        3      8      1
  C9ORF98 WILD-TYPE    161    239    142
D867V5, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               8               239
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF98 MUTATED        2      5      3      1      1
  C9ORF98 WILD-TYPE    119     99     88    120    116
D867V6, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               5                99
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF98 MUTATED        3      7      2
  C9ORF98 WILD-TYPE    156    244    163
D867V7, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               7               244
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF98 MUTATED        3      4      4      1      0
  C9ORF98 WILD-TYPE    115    127    147     93     81
D867V8, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF98 MUTATED        3      3      1      0      1
  C9ORF98 WILD-TYPE    115    133    114     40     70
D867V9, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF98 MUTATED        1      3      3      0      1
  C9ORF98 WILD-TYPE     47    106    127    101     91
D867V10, multiclass
        clus
vv       C9ORF98 MUTATED C9ORF98 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(868) Variable = ZNF341 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF341 MUTATED        2      2      5     11
  ZNF341 WILD-TYPE    133     90    167    165
D868V1, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              5              167
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF341 MUTATED       11      4      3
  ZNF341 WILD-TYPE    204    151    159
D868V2, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1             11              204
  CLUS_2              4              151
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF341 MUTATED        6      7      3      1
  ZNF341 WILD-TYPE    129    117    122     59
D868V3, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              7              117
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF341 MUTATED        8      5      4
  ZNF341 WILD-TYPE    245     97     85
D868V4, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              5               97
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF341 MUTATED        6      4     10
  ZNF341 WILD-TYPE    158    243    133
D868V5, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              4              243
  CLUS_3             10              133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF341 MUTATED        3      2      5      3      7
  ZNF341 WILD-TYPE    118    102     86    118    110
D868V6, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              3              118
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF341 MUTATED        6      8      6
  ZNF341 WILD-TYPE    153    243    159
D868V7, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              6              153
  CLUS_2              8              243
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF341 MUTATED        5      4      6      3      2
  ZNF341 WILD-TYPE    113    127    145     91     79
D868V8, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              4              127
  CLUS_3              6              145
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF341 MUTATED        3      5      4      1      4
  ZNF341 WILD-TYPE    115    131    111     39     67
D868V9, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              131
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF341 MUTATED        3      2      7      3      2
  ZNF341 WILD-TYPE     45    107    123     98     90
D868V10, multiclass
        clus
vv       ZNF341 MUTATED ZNF341 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              2              107
  CLUS_3              7              123
  CLUS_4              3               98
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(869) Variable = MRPL24 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRPL24 MUTATED        0      0      0      6
  MRPL24 WILD-TYPE    135     92    172    170
D869V1, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRPL24 MUTATED        4      0      1
  MRPL24 WILD-TYPE    211    155    161
D869V2, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MRPL24 MUTATED        3      1      0      1
  MRPL24 WILD-TYPE    132    123    125     59
D869V3, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRPL24 MUTATED        4      1      0
  MRPL24 WILD-TYPE    249    101     89
D869V4, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRPL24 MUTATED        0      5      1
  MRPL24 WILD-TYPE    164    242    142
D869V5, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              5              242
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPL24 MUTATED        0      4      2      0      0
  MRPL24 WILD-TYPE    121    100     89    121    117
D869V6, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              4              100
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MRPL24 MUTATED        0      5      1
  MRPL24 WILD-TYPE    159    246    164
D869V7, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPL24 MUTATED        1      2      3      0      0
  MRPL24 WILD-TYPE    117    129    148     94     81
D869V8, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPL24 MUTATED        0      1      1      0      3
  MRPL24 WILD-TYPE    118    135    114     40     68
D869V9, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MRPL24 MUTATED        0      1      3      1      0
  MRPL24 WILD-TYPE     48    108    127    100     92
D869V10, multiclass
        clus
vv       MRPL24 MUTATED MRPL24 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(870) Variable = NRAS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        2      0      0      3
  NRAS WILD-TYPE    133     92    172    173
D870V1, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        3      0      2
  NRAS WILD-TYPE    212    155    160
D870V2, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRAS MUTATED        1      3      1      0
  NRAS WILD-TYPE    134    121    124     60
D870V3, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        2      2      1
  NRAS WILD-TYPE    251    100     88
D870V4, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            2            251
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      2      3
  NRAS WILD-TYPE    164    245    140
D870V5, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            164
  CLUS_2            2            245
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRAS MUTATED        2      0      1      0      2
  NRAS WILD-TYPE    119    104     90    121    115
D870V6, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            1             90
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NRAS MUTATED        0      4      1
  NRAS WILD-TYPE    159    247    164
D870V7, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            159
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRAS MUTATED        0      2      2      0      1
  NRAS WILD-TYPE    118    129    149     94     80
D870V8, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRAS MUTATED        0      2      1      0      1
  NRAS WILD-TYPE    118    134    114     40     70
D870V9, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRAS MUTATED        0      2      1      1      0
  NRAS WILD-TYPE     48    107    129    100     92
D870V10, multiclass
        clus
vv       NRAS MUTATED NRAS WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(871) Variable = RSPH4A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RSPH4A MUTATED        1      1      2      6
  RSPH4A WILD-TYPE    134     91    170    170
D871V1, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RSPH4A MUTATED        3      3      1
  RSPH4A WILD-TYPE    212    152    161
D871V2, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              3              212
  CLUS_2              3              152
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RSPH4A MUTATED        3      4      1      1
  RSPH4A WILD-TYPE    132    120    124     59
D871V3, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RSPH4A MUTATED        6      2      1
  RSPH4A WILD-TYPE    247    100     88
D871V4, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RSPH4A MUTATED        1      5      4
  RSPH4A WILD-TYPE    163    242    139
D871V5, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSPH4A MUTATED        2      2      3      1      2
  RSPH4A WILD-TYPE    119    102     88    120    115
D871V6, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RSPH4A MUTATED        1      9      0
  RSPH4A WILD-TYPE    158    242    165
D871V7, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSPH4A MUTATED        3      2      4      1      0
  RSPH4A WILD-TYPE    115    129    147     93     81
D871V8, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              3              115
  CLUS_2              2              129
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSPH4A MUTATED        0      2      2      1      2
  RSPH4A WILD-TYPE    118    134    113     39     69
D871V9, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RSPH4A MUTATED        0      3      2      1      1
  RSPH4A WILD-TYPE     48    106    128    100     91
D871V10, multiclass
        clus
vv       RSPH4A MUTATED RSPH4A WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(872) Variable = RING1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RING1 MUTATED        1      0      2      6
  RING1 WILD-TYPE    134     92    170    170
D872V1, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RING1 MUTATED        4      1      2
  RING1 WILD-TYPE    211    154    160
D872V2, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RING1 MUTATED        4      2      2      1
  RING1 WILD-TYPE    131    122    123     59
D872V3, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RING1 MUTATED        6      2      1
  RING1 WILD-TYPE    247    100     88
D872V4, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RING1 MUTATED        0      5      3
  RING1 WILD-TYPE    164    242    140
D872V5, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             5             242
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RING1 MUTATED        1      2      2      0      3
  RING1 WILD-TYPE    120    102     89    121    114
D872V6, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RING1 MUTATED        3      3      3
  RING1 WILD-TYPE    156    248    162
D872V7, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             3             248
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RING1 MUTATED        1      2      6      0      0
  RING1 WILD-TYPE    117    129    145     94     81
D872V8, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RING1 MUTATED        1      1      0      1      3
  RING1 WILD-TYPE    117    135    115     39     68
D872V9, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RING1 MUTATED        1      0      4      1      0
  RING1 WILD-TYPE     47    109    126    100     92
D872V10, multiclass
        clus
vv       RING1 MUTATED RING1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             0             109
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(873) Variable = KCNH4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNH4 MUTATED        2      4      2      6
  KCNH4 WILD-TYPE    133     88    170    170
D873V1, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4              88
  CLUS_3             2             170
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH4 MUTATED       10      4      1
  KCNH4 WILD-TYPE    205    151    161
D873V2, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             4             151
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNH4 MUTATED        4      5      2      0
  KCNH4 WILD-TYPE    131    119    123     60
D873V3, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH4 MUTATED        8      1      2
  KCNH4 WILD-TYPE    245    101     87
D873V4, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH4 MUTATED        4     10      1
  KCNH4 WILD-TYPE    160    237    142
D873V5, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            10             237
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH4 MUTATED        1      3      7      3      1
  KCNH4 WILD-TYPE    120    101     84    118    116
D873V6, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH4 MUTATED        5      9      1
  KCNH4 WILD-TYPE    154    242    164
D873V7, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             5             154
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH4 MUTATED        1      6      3      4      1
  KCNH4 WILD-TYPE    117    125    148     90     80
D873V8, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             3             148
  CLUS_4             4              90
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH4 MUTATED        4      5      1      2      3
  KCNH4 WILD-TYPE    114    131    114     38     68
D873V9, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH4 MUTATED        0      7      3      1      4
  KCNH4 WILD-TYPE     48    102    127    100     88
D873V10, multiclass
        clus
vv       KCNH4 MUTATED KCNH4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(874) Variable = ZNF23 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF23 MUTATED        0      0      2      2
  ZNF23 WILD-TYPE    135     92    170    174
D874V1, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF23 MUTATED        2      2      0
  ZNF23 WILD-TYPE    213    153    162
D874V2, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF23 MUTATED        1      0      3      0
  ZNF23 WILD-TYPE    134    124    122     60
D874V3, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0             124
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF23 MUTATED        2      0      2
  ZNF23 WILD-TYPE    251    102     87
D874V4, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF23 MUTATED        2      2      1
  ZNF23 WILD-TYPE    162    245    142
D874V5, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             2             245
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF23 MUTATED        0      0      2      2      1
  ZNF23 WILD-TYPE    121    104     89    119    116
D874V6, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             2              89
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF23 MUTATED        1      2      2
  ZNF23 WILD-TYPE    158    249    163
D874V7, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             2             249
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF23 MUTATED        0      1      1      2      1
  ZNF23 WILD-TYPE    118    130    150     92     80
D874V8, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             1             150
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF23 MUTATED        0      1      2      0      1
  ZNF23 WILD-TYPE    118    135    113     40     70
D874V9, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF23 MUTATED        0      1      1      0      2
  ZNF23 WILD-TYPE     48    108    129    101     90
D874V10, multiclass
        clus
vv       ZNF23 MUTATED ZNF23 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(875) Variable = MYO3A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO3A MUTATED        8      3      8     19
  MYO3A WILD-TYPE    127     89    164    157
D875V1, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             8             127
  CLUS_2             3              89
  CLUS_3             8             164
  CLUS_4            19             157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO3A MUTATED       21      5     10
  MYO3A WILD-TYPE    194    150    152
D875V2, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1            21             194
  CLUS_2             5             150
  CLUS_3            10             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYO3A MUTATED       14      7      6      2
  MYO3A WILD-TYPE    121    117    119     58
D875V3, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1            14             121
  CLUS_2             7             117
  CLUS_3             6             119
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO3A MUTATED       20      4      5
  MYO3A WILD-TYPE    233     98     84
D875V4, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1            20             233
  CLUS_2             4              98
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO3A MUTATED        7     20     10
  MYO3A WILD-TYPE    157    227    133
D875V5, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             7             157
  CLUS_2            20             227
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO3A MUTATED        5      6     12      3     11
  MYO3A WILD-TYPE    116     98     79    118    106
D875V6, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             5             116
  CLUS_2             6              98
  CLUS_3            12              79
  CLUS_4             3             118
  CLUS_5            11             106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYO3A MUTATED        6     20     13
  MYO3A WILD-TYPE    153    231    152
D875V7, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             6             153
  CLUS_2            20             231
  CLUS_3            13             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO3A MUTATED        7     15      7      2      8
  MYO3A WILD-TYPE    111    116    144     92     73
D875V8, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             7             111
  CLUS_2            15             116
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             8              73
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO3A MUTATED        4     11     10      3      4
  MYO3A WILD-TYPE    114    125    105     37     67
D875V9, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             4             114
  CLUS_2            11             125
  CLUS_3            10             105
  CLUS_4             3              37
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYO3A MUTATED        3     10      4     13      2
  MYO3A WILD-TYPE     45     99    126     88     90
D875V10, multiclass
        clus
vv       MYO3A MUTATED MYO3A WILD-TYPE
  CLUS_1             3              45
  CLUS_2            10              99
  CLUS_3             4             126
  CLUS_4            13              88
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(876) Variable = C7ORF49 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C7ORF49 MUTATED        0      0      2      6
  C7ORF49 WILD-TYPE    135     92    170    170
D876V1, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF49 MUTATED        7      0      1
  C7ORF49 WILD-TYPE    208    155    161
D876V2, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C7ORF49 MUTATED        3      1      1      0
  C7ORF49 WILD-TYPE    132    123    124     60
D876V3, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1               123
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF49 MUTATED        2      1      2
  C7ORF49 WILD-TYPE    251    101     87
D876V4, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               2               251
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF49 MUTATED        1      5      2
  C7ORF49 WILD-TYPE    163    242    141
D876V5, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               5               242
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF49 MUTATED        0      1      5      1      1
  C7ORF49 WILD-TYPE    121    103     86    120    116
D876V6, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C7ORF49 MUTATED        2      5      1
  C7ORF49 WILD-TYPE    157    246    164
D876V7, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               5               246
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF49 MUTATED        1      4      2      1      0
  C7ORF49 WILD-TYPE    117    127    149     93     81
D876V8, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF49 MUTATED        0      2      1      0      1
  C7ORF49 WILD-TYPE    118    134    114     40     70
D876V9, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C7ORF49 MUTATED        0      1      3      0      0
  C7ORF49 WILD-TYPE     48    108    127    101     92
D876V10, multiclass
        clus
vv       C7ORF49 MUTATED C7ORF49 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(877) Variable = C1RL MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1RL MUTATED        1      1      2      4
  C1RL WILD-TYPE    134     91    170    172
D877V1, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1RL MUTATED        4      2      0
  C1RL WILD-TYPE    211    153    162
D877V2, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            4            211
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1RL MUTATED        4      2      0      1
  C1RL WILD-TYPE    131    122    125     59
D877V3, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1RL MUTATED        7      0      0
  C1RL WILD-TYPE    246    102     89
D877V4, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            7            246
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1RL MUTATED        1      5      1
  C1RL WILD-TYPE    163    242    142
D877V5, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1RL MUTATED        1      0      6      0      0
  C1RL WILD-TYPE    120    104     85    121    117
D877V6, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1RL MUTATED        2      6      0
  C1RL WILD-TYPE    157    245    165
D877V7, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1RL MUTATED        1      3      3      1      0
  C1RL WILD-TYPE    117    128    148     93     81
D877V8, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1RL MUTATED        2      2      0      1      1
  C1RL WILD-TYPE    116    134    115     39     70
D877V9, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1RL MUTATED        1      3      1      0      1
  C1RL WILD-TYPE     47    106    129    101     91
D877V10, multiclass
        clus
vv       C1RL MUTATED C1RL WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(878) Variable = C9ORF25 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF25 MUTATED        1      0      1      3
  C9ORF25 WILD-TYPE    134     92    171    173
D878V1, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF25 MUTATED        3      1      1
  C9ORF25 WILD-TYPE    212    154    161
D878V2, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF25 MUTATED        3      1      0      1
  C9ORF25 WILD-TYPE    132    123    125     59
D878V3, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1               123
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF25 MUTATED        5      0      0
  C9ORF25 WILD-TYPE    248    102     89
D878V4, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF25 MUTATED        0      3      2
  C9ORF25 WILD-TYPE    164    244    141
D878V5, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               3               244
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF25 MUTATED        0      1      2      0      2
  C9ORF25 WILD-TYPE    121    103     89    121    115
D878V6, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF25 MUTATED        0      3      2
  C9ORF25 WILD-TYPE    159    248    163
D878V7, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               3               248
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF25 MUTATED        0      2      2      0      1
  C9ORF25 WILD-TYPE    118    129    149     94     80
D878V8, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               129
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF25 MUTATED        0      2      1      1      1
  C9ORF25 WILD-TYPE    118    134    114     39     70
D878V9, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF25 MUTATED        0      2      2      1      0
  C9ORF25 WILD-TYPE     48    107    128    100     92
D878V10, multiclass
        clus
vv       C9ORF25 MUTATED C9ORF25 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(879) Variable = LRFN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRFN3 MUTATED        2      2      2     16
  LRFN3 WILD-TYPE    133     90    170    160
D879V1, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRFN3 MUTATED       15      0      4
  LRFN3 WILD-TYPE    200    155    158
D879V2, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             0             155
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRFN3 MUTATED        5     11      0      1
  LRFN3 WILD-TYPE    130    113    125     59
D879V3, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             5             130
  CLUS_2            11             113
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRFN3 MUTATED       11      6      0
  LRFN3 WILD-TYPE    242     96     89
D879V4, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             6              96
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRFN3 MUTATED        2     15      4
  LRFN3 WILD-TYPE    162    232    139
D879V5, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            15             232
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRFN3 MUTATED        2      9      7      0      3
  LRFN3 WILD-TYPE    119     95     84    121    114
D879V6, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             9              95
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRFN3 MUTATED        4     14      4
  LRFN3 WILD-TYPE    155    237    161
D879V7, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            14             237
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRFN3 MUTATED        4      9      8      0      1
  LRFN3 WILD-TYPE    114    122    143     94     80
D879V8, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             122
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRFN3 MUTATED        1      7      3      1      4
  LRFN3 WILD-TYPE    117    129    112     39     67
D879V9, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRFN3 MUTATED        1      6      6      3      0
  LRFN3 WILD-TYPE     47    103    124     98     92
D879V10, multiclass
        clus
vv       LRFN3 MUTATED LRFN3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             6             124
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(880) Variable = ING1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ING1 MUTATED        1      2      0      5
  ING1 WILD-TYPE    134     90    172    171
D880V1, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ING1 MUTATED        5      1      1
  ING1 WILD-TYPE    210    154    161
D880V2, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ING1 MUTATED        4      0      1      0
  ING1 WILD-TYPE    131    124    124     60
D880V3, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            0            124
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ING1 MUTATED        3      0      2
  ING1 WILD-TYPE    250    102     87
D880V4, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            0            102
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ING1 MUTATED        2      4      2
  ING1 WILD-TYPE    162    243    141
D880V5, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ING1 MUTATED        0      2      3      1      2
  ING1 WILD-TYPE    121    102     88    120    115
D880V6, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ING1 MUTATED        3      4      1
  ING1 WILD-TYPE    156    247    164
D880V7, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ING1 MUTATED        2      3      2      1      0
  ING1 WILD-TYPE    116    128    149     93     81
D880V8, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ING1 MUTATED        2      2      0      2      1
  ING1 WILD-TYPE    116    134    115     38     70
D880V9, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ING1 MUTATED        1      3      2      0      1
  ING1 WILD-TYPE     47    106    128    101     91
D880V10, multiclass
        clus
vv       ING1 MUTATED ING1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(881) Variable = FAM26E MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM26E MUTATED        0      0      0      3
  FAM26E WILD-TYPE    135     92    172    173
D881V1, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM26E MUTATED        3      0      0
  FAM26E WILD-TYPE    212    155    162
D881V2, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM26E MUTATED        0      2      1      0
  FAM26E WILD-TYPE    135    122    124     60
D881V3, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM26E MUTATED        2      0      1
  FAM26E WILD-TYPE    251    102     88
D881V4, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              2              251
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM26E MUTATED        1      1      1
  FAM26E WILD-TYPE    163    246    142
D881V5, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              1              163
  CLUS_2              1              246
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM26E MUTATED        0      0      2      0      1
  FAM26E WILD-TYPE    121    104     89    121    116
D881V6, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM26E MUTATED        1      1      1
  FAM26E WILD-TYPE    158    250    164
D881V7, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              1              158
  CLUS_2              1              250
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM26E MUTATED        0      1      1      0      1
  FAM26E WILD-TYPE    118    130    150     94     80
D881V8, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM26E MUTATED        0      1      1      0      1
  FAM26E WILD-TYPE    118    135    114     40     70
D881V9, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM26E MUTATED        0      1      2      0      0
  FAM26E WILD-TYPE     48    108    128    101     92
D881V10, multiclass
        clus
vv       FAM26E MUTATED FAM26E WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(882) Variable = USP1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP1 MUTATED        1      0      1      5
  USP1 WILD-TYPE    134     92    171    171
D882V1, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP1 MUTATED        5      1      1
  USP1 WILD-TYPE    210    154    161
D882V2, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  USP1 MUTATED        3      2      1      0
  USP1 WILD-TYPE    132    122    124     60
D882V3, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP1 MUTATED        4      1      1
  USP1 WILD-TYPE    249    101     88
D882V4, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP1 MUTATED        2      3      1
  USP1 WILD-TYPE    162    244    142
D882V5, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP1 MUTATED        1      0      4      1      0
  USP1 WILD-TYPE    120    104     87    120    117
D882V6, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  USP1 MUTATED        1      5      1
  USP1 WILD-TYPE    158    246    164
D882V7, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP1 MUTATED        0      2      2      1      2
  USP1 WILD-TYPE    118    129    149     93     79
D882V8, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP1 MUTATED        1      1      0      2      3
  USP1 WILD-TYPE    117    135    115     38     68
D882V9, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  USP1 MUTATED        1      1      3      1      1
  USP1 WILD-TYPE     47    108    127    100     91
D882V10, multiclass
        clus
vv       USP1 MUTATED USP1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(883) Variable = CRYBG3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRYBG3 MUTATED        1      2      1     13
  CRYBG3 WILD-TYPE    134     90    171    163
D883V1, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              1              171
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBG3 MUTATED       12      3      3
  CRYBG3 WILD-TYPE    203    152    159
D883V2, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRYBG3 MUTATED        6      6      2      1
  CRYBG3 WILD-TYPE    129    118    123     59
D883V3, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              6              118
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBG3 MUTATED       11      3      1
  CRYBG3 WILD-TYPE    242     99     88
D883V4, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBG3 MUTATED        4     12      2
  CRYBG3 WILD-TYPE    160    235    141
D883V5, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             12              235
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBG3 MUTATED        1      3      7      3      4
  CRYBG3 WILD-TYPE    120    101     84    118    113
D883V6, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              3              118
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBG3 MUTATED        4     13      1
  CRYBG3 WILD-TYPE    155    238    164
D883V7, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             13              238
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBG3 MUTATED        1      7      7      3      0
  CRYBG3 WILD-TYPE    117    124    144     91     81
D883V8, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              124
  CLUS_3              7              144
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBG3 MUTATED        3      8      1      1      2
  CRYBG3 WILD-TYPE    115    128    114     39     69
D883V9, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              128
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBG3 MUTATED        1      6      4      1      3
  CRYBG3 WILD-TYPE     47    103    126    100     89
D883V10, multiclass
        clus
vv       CRYBG3 MUTATED CRYBG3 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              6              103
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(884) Variable = HCFC1R1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HCFC1R1 MUTATED        0      0      0      6
  HCFC1R1 WILD-TYPE    135     92    172    170
D884V1, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HCFC1R1 MUTATED        5      0      0
  HCFC1R1 WILD-TYPE    210    155    162
D884V2, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HCFC1R1 MUTATED        1      1      0      0
  HCFC1R1 WILD-TYPE    134    123    125     60
D884V3, multiclass
[1] "Remove cluster labels:" "HCFC1R1 MUTATED"       
clus
  HCFC1R1 MUTATED HCFC1R1 WILD-TYPE 
                2               442 
       TCGA-2H-A9GF        TCGA-2H-A9GI        TCGA-2H-A9GL        TCGA-2H-A9GQ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-2H-A9GR        TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-B7-A5TJ        TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4183 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4184        TCGA-BR-4187        TCGA-BR-4188        TCGA-BR-4191 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256        TCGA-BR-4257 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280        TCGA-BR-4292 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361        TCGA-BR-4362 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368        TCGA-BR-4369 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452        TCGA-BR-6453 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6564        TCGA-BR-6565        TCGA-BR-6566 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707        TCGA-BR-6709 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802        TCGA-BR-6803 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197        TCGA-BR-7703 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-7704        TCGA-BR-7715        TCGA-BR-7716        TCGA-BR-7717 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-7722        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8080        TCGA-BR-8081 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8380 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486        TCGA-BR-8588 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8589        TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8676        TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8680        TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2        TCGA-BR-A4J4 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7        TCGA-BR-A4J8 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF        TCGA-BR-A4QI 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4300        TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4306        TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4455        TCGA-CG-4460        TCGA-CG-4465        TCGA-CG-4466 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5723 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6527 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8578 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A748 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-EQ-8122        TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-F1-6875        TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7916 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-FP-7998        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HJ-7597        TCGA-HU-8602 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4GF        TCGA-HU-A4GQ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A8O2        TCGA-IG-A97H 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RL        TCGA-IN-A6RN 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A939 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A93G 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88W        TCGA-L5-A891        TCGA-L5-A8NE 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A8NF        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NQ        TCGA-L5-A8NS        TCGA-L5-A8NT 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HW        TCGA-LN-A7HX 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-Q9-A6FU 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-VQ-A8DL        TCGA-VQ-A8DT 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-AA64        TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-AA6F        TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6K 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8Q7 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VR-AA4D        TCGA-VR-AA7B        TCGA-X8-AAAR        TCGA-XP-A8T6 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-XP-A8T7        TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-Z6-AAPN        TCGA-ZA-A8F6 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HCFC1R1 MUTATED        1      1      0
  HCFC1R1 WILD-TYPE    252    101     89
D884V4, multiclass
[1] "Remove cluster labels:" "HCFC1R1 MUTATED"       
clus
  HCFC1R1 MUTATED HCFC1R1 WILD-TYPE 
                2               442 
       TCGA-2H-A9GF        TCGA-2H-A9GI        TCGA-2H-A9GL        TCGA-2H-A9GQ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-2H-A9GR        TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-B7-A5TJ        TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4183 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4184        TCGA-BR-4187        TCGA-BR-4188        TCGA-BR-4191 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256        TCGA-BR-4257 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280        TCGA-BR-4292 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361        TCGA-BR-4362 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368        TCGA-BR-4369 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452        TCGA-BR-6453 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6564        TCGA-BR-6565        TCGA-BR-6566 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707        TCGA-BR-6709 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802        TCGA-BR-6803 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197        TCGA-BR-7703 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-7704        TCGA-BR-7715        TCGA-BR-7716        TCGA-BR-7717 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-7722        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8080        TCGA-BR-8081 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8380 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486        TCGA-BR-8588 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8589        TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8676        TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8680        TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J2        TCGA-BR-A4J4 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4J5        TCGA-BR-A4J6        TCGA-BR-A4J7        TCGA-BR-A4J8 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4PD        TCGA-BR-A4PE        TCGA-BR-A4PF        TCGA-BR-A4QI 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4300        TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4306        TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444        TCGA-CG-4449 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4455        TCGA-CG-4460        TCGA-CG-4465        TCGA-CG-4466 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475        TCGA-CG-4476 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5723 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6527 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8578 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A748 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-EQ-8122        TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-F1-6875        TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7916 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-FP-7998        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HJ-7597        TCGA-HU-8602 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4GF        TCGA-HU-A4GQ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A8O2        TCGA-IG-A97H 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RL        TCGA-IN-A6RN 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A939 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A93G 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88W        TCGA-L5-A891        TCGA-L5-A8NE 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A8NF        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NQ        TCGA-L5-A8NS        TCGA-L5-A8NT 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HW        TCGA-LN-A7HX 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-Q9-A6FU 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-VQ-A8DL        TCGA-VQ-A8DT 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91U        TCGA-VQ-A91V        TCGA-VQ-A92D 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-AA64        TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VQ-AA6F        TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6K 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8Q7 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-VR-AA4D        TCGA-VR-AA7B        TCGA-X8-AAAR        TCGA-XP-A8T6 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-XP-A8T7        TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
       TCGA-Z6-AAPN        TCGA-ZA-A8F6 
"HCFC1R1 WILD-TYPE" "HCFC1R1 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HCFC1R1 MUTATED        0      4      2
  HCFC1R1 WILD-TYPE    164    243    141
D884V5, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCFC1R1 MUTATED        0      0      4      0      2
  HCFC1R1 WILD-TYPE    121    104     87    121    115
D884V6, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HCFC1R1 MUTATED        0      6      0
  HCFC1R1 WILD-TYPE    159    245    165
D884V7, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               6               245
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCFC1R1 MUTATED        0      3      3      0      0
  HCFC1R1 WILD-TYPE    118    128    148     94     81
D884V8, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCFC1R1 MUTATED        0      2      0      0      1
  HCFC1R1 WILD-TYPE    118    134    115     40     70
D884V9, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCFC1R1 MUTATED        0      2      1      0      0
  HCFC1R1 WILD-TYPE     48    107    129    101     92
D884V10, multiclass
        clus
vv       HCFC1R1 MUTATED HCFC1R1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               1               129
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(885) Variable = ZNF142 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF142 MUTATED        1      0      6     18
  ZNF142 WILD-TYPE    134     92    166    158
D885V1, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              6              166
  CLUS_4             18              158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF142 MUTATED       15      3      3
  ZNF142 WILD-TYPE    200    152    159
D885V2, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1             15              200
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF142 MUTATED        7     11      1      0
  ZNF142 WILD-TYPE    128    113    124     60
D885V3, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              7              128
  CLUS_2             11              113
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF142 MUTATED       13      5      1
  ZNF142 WILD-TYPE    240     97     88
D885V4, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF142 MUTATED        6     15      2
  ZNF142 WILD-TYPE    158    232    141
D885V5, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             15              232
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF142 MUTATED        2      6     10      3      2
  ZNF142 WILD-TYPE    119     98     81    118    115
D885V6, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              6               98
  CLUS_3             10               81
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF142 MUTATED        5     16      4
  ZNF142 WILD-TYPE    154    235    161
D885V7, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             16              235
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF142 MUTATED        3     12      6      3      1
  ZNF142 WILD-TYPE    115    119    145     91     80
D885V8, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             12              119
  CLUS_3              6              145
  CLUS_4              3               91
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF142 MUTATED        3      6      2      4      5
  ZNF142 WILD-TYPE    115    130    113     36     66
D885V9, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              4               36
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF142 MUTATED        1      8      5      3      3
  ZNF142 WILD-TYPE     47    101    125     98     89
D885V10, multiclass
        clus
vv       ZNF142 MUTATED ZNF142 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              8              101
  CLUS_3              5              125
  CLUS_4              3               98
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(886) Variable = POLE3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POLE3 MUTATED        0      0      0      3
  POLE3 WILD-TYPE    135     92    172    173
D886V1, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  POLE3 MUTATED        3      0      0
  POLE3 WILD-TYPE    212    155    162
D886V2, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POLE3 MUTATED        2      0      0      0
  POLE3 WILD-TYPE    133    124    125     60
D886V3, multiclass
[1] "Remove cluster labels:" "POLE3 MUTATED"         
clus
  POLE3 MUTATED POLE3 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4305      TCGA-CG-4306      TCGA-CG-4436      TCGA-CG-4437 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4438      TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4449      TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4466      TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4476      TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-6527      TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-6818      TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-8572      TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-8578      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-A4YX      TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-A748      TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6874 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-FP-7998      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HF-7134      TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-8602      TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  POLE3 MUTATED        2      0      0
  POLE3 WILD-TYPE    251    102     89
D886V4, multiclass
[1] "Remove cluster labels:" "POLE3 MUTATED"         
clus
  POLE3 MUTATED POLE3 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4305      TCGA-CG-4306      TCGA-CG-4436      TCGA-CG-4437 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4438      TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4449      TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4466      TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-4476      TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5723      TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5727      TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-CG-5733      TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-5579      TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-6521      TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-6527      TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-6818      TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-8572      TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-8578      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-A4YX      TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-D7-A748      TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6874 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-FP-7998      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HF-7134      TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-8602      TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"POLE3 WILD-TYPE" "POLE3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  POLE3 MUTATED        0      1      2
  POLE3 WILD-TYPE    164    246    141
D886V5, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             1             246
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLE3 MUTATED        0      0      2      0      1
  POLE3 WILD-TYPE    121    104     89    121    116
D886V6, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  POLE3 MUTATED        0      2      1
  POLE3 WILD-TYPE    159    249    164
D886V7, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             2             249
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLE3 MUTATED        0      1      1      0      1
  POLE3 WILD-TYPE    118    130    150     94     80
D886V8, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLE3 MUTATED        0      0      1      0      2
  POLE3 WILD-TYPE    118    136    114     40     69
D886V9, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             136
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POLE3 MUTATED        0      1      1      1      0
  POLE3 WILD-TYPE     48    108    129    100     92
D886V10, multiclass
        clus
vv       POLE3 MUTATED POLE3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(887) Variable = HGF MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HGF MUTATED        4      3      3     10
  HGF WILD-TYPE    131     89    169    166
D887V1, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           4           131
  CLUS_2           3            89
  CLUS_3           3           169
  CLUS_4          10           166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HGF MUTATED        9      4      5
  HGF WILD-TYPE    206    151    157
D887V2, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           9           206
  CLUS_2           4           151
  CLUS_3           5           157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HGF MUTATED        4      4      4      7
  HGF WILD-TYPE    131    120    121     53
D887V3, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           4           131
  CLUS_2           4           120
  CLUS_3           4           121
  CLUS_4           7            53
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HGF MUTATED       12      5      2
  HGF WILD-TYPE    241     97     87
D887V4, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1          12           241
  CLUS_2           5            97
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HGF MUTATED        4     12      4
  HGF WILD-TYPE    160    235    139
D887V5, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           4           160
  CLUS_2          12           235
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HGF MUTATED        5      4      5      1      5
  HGF WILD-TYPE    116    100     86    120    112
D887V6, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           5           116
  CLUS_2           4           100
  CLUS_3           5            86
  CLUS_4           1           120
  CLUS_5           5           112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  HGF MUTATED        3     11      6
  HGF WILD-TYPE    156    240    159
D887V7, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           3           156
  CLUS_2          11           240
  CLUS_3           6           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HGF MUTATED        5      3      9      1      2
  HGF WILD-TYPE    113    128    142     93     79
D887V8, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           5           113
  CLUS_2           3           128
  CLUS_3           9           142
  CLUS_4           1            93
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HGF MUTATED        1      4      4      2      6
  HGF WILD-TYPE    117    132    111     38     65
D887V9, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           1           117
  CLUS_2           4           132
  CLUS_3           4           111
  CLUS_4           2            38
  CLUS_5           6            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HGF MUTATED        3      2      7      4      1
  HGF WILD-TYPE     45    107    123     97     91
D887V10, multiclass
        clus
vv       HGF MUTATED HGF WILD-TYPE
  CLUS_1           3            45
  CLUS_2           2           107
  CLUS_3           7           123
  CLUS_4           4            97
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(888) Variable = PAM MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAM MUTATED        0      0      2      8
  PAM WILD-TYPE    135     92    170    168
D888V1, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           0           135
  CLUS_2           0            92
  CLUS_3           2           170
  CLUS_4           8           168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PAM MUTATED        5      1      1
  PAM WILD-TYPE    210    154    161
D888V2, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           5           210
  CLUS_2           1           154
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAM MUTATED        1      3      2      0
  PAM WILD-TYPE    134    121    123     60
D888V3, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           1           134
  CLUS_2           3           121
  CLUS_3           2           123
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PAM MUTATED        3      2      1
  PAM WILD-TYPE    250    100     88
D888V4, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           3           250
  CLUS_2           2           100
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PAM MUTATED        2      3      4
  PAM WILD-TYPE    162    244    139
D888V5, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           2           162
  CLUS_2           3           244
  CLUS_3           4           139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAM MUTATED        1      1      3      1      3
  PAM WILD-TYPE    120    103     88    120    114
D888V6, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           1           120
  CLUS_2           1           103
  CLUS_3           3            88
  CLUS_4           1           120
  CLUS_5           3           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PAM MUTATED        2      6      2
  PAM WILD-TYPE    157    245    163
D888V7, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           2           157
  CLUS_2           6           245
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAM MUTATED        0      4      4      1      1
  PAM WILD-TYPE    118    127    147     93     80
D888V8, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           0           118
  CLUS_2           4           127
  CLUS_3           4           147
  CLUS_4           1            93
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAM MUTATED        2      2      0      0      3
  PAM WILD-TYPE    116    134    115     40     68
D888V9, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           2           116
  CLUS_2           2           134
  CLUS_3           0           115
  CLUS_4           0            40
  CLUS_5           3            68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAM MUTATED        0      3      2      1      1
  PAM WILD-TYPE     48    106    128    100     91
D888V10, multiclass
        clus
vv       PAM MUTATED PAM WILD-TYPE
  CLUS_1           0            48
  CLUS_2           3           106
  CLUS_3           2           128
  CLUS_4           1           100
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(889) Variable = TMEM116 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM116 MUTATED        1      0      0      2
  TMEM116 WILD-TYPE    134     92    172    174
D889V1, multiclass
        clus
vv       TMEM116 MUTATED TMEM116 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM116 MUTATED        2      0      0
  TMEM116 WILD-TYPE    213    155    162
D889V2, multiclass
[1] "Remove cluster labels:" "TMEM116 MUTATED"       
clus
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                2               530 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7716        TCGA-BR-7717        TCGA-BR-7722        TCGA-BR-7723 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7851        TCGA-BR-7901        TCGA-BR-7957        TCGA-BR-7958 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7959        TCGA-BR-8058        TCGA-BR-8059        TCGA-BR-8060 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8077        TCGA-BR-8078        TCGA-BR-8080        TCGA-BR-8081 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8285        TCGA-BR-8286        TCGA-BR-8289 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8366        TCGA-BR-8367        TCGA-BR-8368        TCGA-BR-8369 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8370        TCGA-BR-8371        TCGA-BR-8372        TCGA-BR-8373 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8380        TCGA-BR-8381        TCGA-BR-8382        TCGA-BR-8384 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8483        TCGA-BR-8484        TCGA-BR-8485        TCGA-BR-8486 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8589        TCGA-BR-8590 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8686        TCGA-BR-8687        TCGA-BR-8690 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A44T        TCGA-BR-A44U        TCGA-BR-A452        TCGA-BR-A453 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4CQ        TCGA-BR-A4CR        TCGA-BR-A4CS        TCGA-BR-A4IU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4IV        TCGA-BR-A4IY        TCGA-BR-A4IZ        TCGA-BR-A4J1 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J2        TCGA-BR-A4J4        TCGA-BR-A4J5        TCGA-BR-A4J6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4PE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4PF        TCGA-BR-A4QI        TCGA-BR-A4QM        TCGA-CD-5798 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5799        TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5803        TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8525        TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8529        TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8533        TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A486        TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A4MJ        TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-5716 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719        TCGA-CG-5720 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723        TCGA-CG-5724 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727        TCGA-CG-5728 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733        TCGA-CG-5734 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579        TCGA-D7-6518 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521        TCGA-D7-6522 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526        TCGA-D7-6527 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8573        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YV        TCGA-D7-A4YX        TCGA-D7-A4YY        TCGA-D7-A4Z0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6ET        TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A748        TCGA-D7-A74A        TCGA-D7-A74B        TCGA-EQ-5647 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-EQ-8122        TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-F1-6875        TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7735 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-7829        TCGA-FP-7916        TCGA-FP-7998        TCGA-FP-8099 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-8209        TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-A4BE        TCGA-FP-A4BF        TCGA-FP-A8CX        TCGA-FP-A9TM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7133        TCGA-HF-7134 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-7136        TCGA-HF-A5NB        TCGA-HJ-7597        TCGA-HU-8238 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8243        TCGA-HU-8244        TCGA-HU-8249        TCGA-HU-8602 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4G2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4G3        TCGA-HU-A4G6        TCGA-HU-A4G8        TCGA-HU-A4G9 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF        TCGA-HU-A4GH 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GP        TCGA-HU-A4GQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H0        TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8        TCGA-HU-A4HB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4HD        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A97H        TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-8462        TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A6RL        TCGA-IN-A6RN        TCGA-IN-A6RO        TCGA-IN-A6RP 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A6RR        TCGA-IN-A6RS        TCGA-IN-A7NR        TCGA-IN-A7NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X        TCGA-IP-7968 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB        TCGA-JY-A6FD 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH        TCGA-JY-A938 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D        TCGA-JY-A93E 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A93F        TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-KB-A93J        TCGA-KH-A6WC        TCGA-L5-A43C        TCGA-L5-A43E 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J        TCGA-L5-A43M 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG        TCGA-L5-A4OH 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OI        TCGA-L5-A4OJ        TCGA-L5-A4OM        TCGA-L5-A4ON 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ        TCGA-L5-A4OR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU        TCGA-L5-A4OW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T        TCGA-L5-A88V 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z        TCGA-L5-A891 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF        TCGA-L5-A8NG 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN        TCGA-L5-A8NQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT        TCGA-L5-A8NU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W        TCGA-LN-A49X 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A3 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A7HX        TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A8I0        TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A9FQ        TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-MX-A5UJ        TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Q9-A6FW        TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7ZI        TCGA-R5-A7ZR        TCGA-R5-A804        TCGA-R5-A805 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6DN        TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6L6        TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6Y2        TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N2        TCGA-RD-A8N4        TCGA-RD-A8N5 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N6        TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-S8-A6BW        TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-A7RC        TCGA-V5-A7RE        TCGA-V5-AASV        TCGA-V5-AASW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-AASX        TCGA-VQ-A8DL        TCGA-VQ-A8DT        TCGA-VQ-A8DU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8DV        TCGA-VQ-A8DZ        TCGA-VQ-A8E2        TCGA-VQ-A8E7 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8P2        TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8PM        TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91V 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM116 MUTATED        1      2      0      0
  TMEM116 WILD-TYPE    134    122    125     60
D889V3, multiclass
        clus
vv       TMEM116 MUTATED TMEM116 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM116 MUTATED        3      0      0
  TMEM116 WILD-TYPE    250    102     89
D889V4, multiclass
        clus
vv       TMEM116 MUTATED TMEM116 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM116 MUTATED        0      2      0
  TMEM116 WILD-TYPE    164    245    143
D889V5, multiclass
[1] "Remove cluster labels:" "TMEM116 MUTATED"       
clus
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                2               552 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4187        TCGA-BR-4191 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4201        TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4257        TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4292        TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4362        TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4369        TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6453        TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6457        TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6565        TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6707        TCGA-BR-6709        TCGA-BR-6801        TCGA-BR-6802 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7716        TCGA-BR-7717        TCGA-BR-7722        TCGA-BR-7723 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7851        TCGA-BR-7901        TCGA-BR-7957        TCGA-BR-7958 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7959        TCGA-BR-8058        TCGA-BR-8059        TCGA-BR-8060 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8077        TCGA-BR-8078        TCGA-BR-8080        TCGA-BR-8081 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289        TCGA-BR-8291 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8361        TCGA-BR-8363 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8364        TCGA-BR-8365        TCGA-BR-8366        TCGA-BR-8367 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8371        TCGA-BR-8372 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381        TCGA-BR-8382 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8484        TCGA-BR-8485 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8589 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686        TCGA-BR-8687 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U        TCGA-BR-A452 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A453        TCGA-BR-A4CR        TCGA-BR-A4CS        TCGA-BR-A4IU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4IV        TCGA-BR-A4IY        TCGA-BR-A4IZ        TCGA-BR-A4J1 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J2        TCGA-BR-A4J4        TCGA-BR-A4J5        TCGA-BR-A4J6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4PE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4PF        TCGA-BR-A4QI        TCGA-BR-A4QM        TCGA-CD-5798 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5799        TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5803 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305        TCGA-CG-4306 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438        TCGA-CG-4440 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4441        TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4449        TCGA-CG-4460        TCGA-CG-4462        TCGA-CG-4465 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4466        TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4476        TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5718        TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5722        TCGA-CG-5723        TCGA-CG-5724        TCGA-CG-5725 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5726        TCGA-CG-5732        TCGA-CG-5734        TCGA-D7-5577 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-5578        TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6521        TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6526        TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6817        TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8570        TCGA-D7-8572        TCGA-D7-8573        TCGA-D7-8574 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8575        TCGA-D7-8576        TCGA-D7-8578        TCGA-D7-8579 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A6F2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A747        TCGA-D7-A748        TCGA-D7-A74A        TCGA-EQ-8122 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7735        TCGA-FP-7829 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-7916        TCGA-FP-7998        TCGA-FP-8099        TCGA-FP-8209 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631        TCGA-FP-A4BE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-A4BF        TCGA-FP-A8CX        TCGA-FP-A9TM        TCGA-HF-7131 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-7132        TCGA-HF-7133        TCGA-HF-7134        TCGA-HF-7136 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-A5NB        TCGA-HJ-7597        TCGA-HU-8238        TCGA-HU-8243 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8244        TCGA-HU-8249        TCGA-HU-8602        TCGA-HU-8604 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4G2        TCGA-HU-A4G3 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4G6        TCGA-HU-A4G8        TCGA-HU-A4G9        TCGA-HU-A4GC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GD        TCGA-HU-A4GF        TCGA-HU-A4GH        TCGA-HU-A4GJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GN        TCGA-HU-A4GP        TCGA-HU-A4GQ        TCGA-HU-A4GT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H6        TCGA-HU-A4H8        TCGA-HU-A4HB        TCGA-HU-A4HD 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8        TCGA-IG-A3QL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A6RN        TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A7NR        TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-AB1X        TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FB        TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FH        TCGA-JY-A938        TCGA-JY-A939        TCGA-JY-A93C 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A93D        TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F7 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-KB-A93G        TCGA-KB-A93J        TCGA-KH-A6WC        TCGA-L5-A43C 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ        TCGA-L5-A4OM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NG        TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NK        TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NQ        TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NU        TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L7-A6VZ        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49X        TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A3        TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A8        TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A5U5        TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A7HW        TCGA-LN-A7HX        TCGA-LN-A7HY        TCGA-LN-A7HZ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A8HZ        TCGA-LN-A8I0        TCGA-LN-A8I1        TCGA-LN-A9FO 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A9FP        TCGA-LN-A9FQ        TCGA-LN-A9FR        TCGA-M9-A5M8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-MX-A5UG        TCGA-MX-A5UJ        TCGA-MX-A663        TCGA-MX-A666 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Q9-A6FU        TCGA-Q9-A6FW        TCGA-R5-A7O7        TCGA-R5-A7ZE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7ZF        TCGA-R5-A7ZI        TCGA-R5-A7ZR        TCGA-R5-A805 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6DN        TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6L6        TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6Y2        TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N2        TCGA-RD-A8N4        TCGA-RD-A8N5 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N6        TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-S8-A6BW        TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-A7RC        TCGA-V5-A7RE        TCGA-V5-AASV        TCGA-V5-AASW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-AASX        TCGA-VQ-A8DT        TCGA-VQ-A8DU        TCGA-VQ-A8DV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8DZ        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91V        TCGA-VQ-A92D 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68        TCGA-VQ-AA69 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F        TCGA-VQ-AA6G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K        TCGA-VR-A8EO 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER        TCGA-VR-A8ET 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX        TCGA-VR-A8EY 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D        TCGA-VR-AA4G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I        TCGA-X8-AAAR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-XP-A8T6        TCGA-XP-A8T8        TCGA-Z6-A8JD        TCGA-Z6-A8JE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Z6-A9VB        TCGA-Z6-AAPN        TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM116 MUTATED        0      0      2      0      0
  TMEM116 WILD-TYPE    121    104     89    121    117
D889V6, multiclass
[1] "Remove cluster labels:" "TMEM116 MUTATED"       
clus
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                2               552 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-4187        TCGA-BR-4191 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4201        TCGA-BR-4253        TCGA-BR-4255        TCGA-BR-4256 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4257        TCGA-BR-4267        TCGA-BR-4279        TCGA-BR-4280 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4292        TCGA-BR-4294        TCGA-BR-4357        TCGA-BR-4361 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4362        TCGA-BR-4363        TCGA-BR-4366        TCGA-BR-4368 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-4369        TCGA-BR-4370        TCGA-BR-4371        TCGA-BR-6452 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6453        TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6457        TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6565        TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6707        TCGA-BR-6709        TCGA-BR-6801        TCGA-BR-6802 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7716        TCGA-BR-7717        TCGA-BR-7722        TCGA-BR-7723 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7851        TCGA-BR-7901        TCGA-BR-7957        TCGA-BR-7958 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7959        TCGA-BR-8058        TCGA-BR-8059        TCGA-BR-8060 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8077        TCGA-BR-8078        TCGA-BR-8080        TCGA-BR-8081 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289        TCGA-BR-8291 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8361        TCGA-BR-8363 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8364        TCGA-BR-8365        TCGA-BR-8366        TCGA-BR-8367 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8371        TCGA-BR-8372 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381        TCGA-BR-8382 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8484        TCGA-BR-8485 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8589 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8590        TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8677        TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8682        TCGA-BR-8683        TCGA-BR-8686        TCGA-BR-8687 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8690        TCGA-BR-A44T        TCGA-BR-A44U        TCGA-BR-A452 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A453        TCGA-BR-A4CR        TCGA-BR-A4CS        TCGA-BR-A4IU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4IV        TCGA-BR-A4IY        TCGA-BR-A4IZ        TCGA-BR-A4J1 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J2        TCGA-BR-A4J4        TCGA-BR-A4J5        TCGA-BR-A4J6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4PE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4PF        TCGA-BR-A4QI        TCGA-BR-A4QM        TCGA-CD-5798 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5799        TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5803 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8528        TCGA-CD-8529 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8530        TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8534        TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A487        TCGA-CD-A489        TCGA-CD-A48A        TCGA-CD-A48C 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI        TCGA-CD-A4MJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4301        TCGA-CG-4304        TCGA-CG-4305        TCGA-CG-4306 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4436        TCGA-CG-4437        TCGA-CG-4438        TCGA-CG-4440 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4441        TCGA-CG-4442        TCGA-CG-4443        TCGA-CG-4444 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4449        TCGA-CG-4460        TCGA-CG-4462        TCGA-CG-4465 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4466        TCGA-CG-4469        TCGA-CG-4474        TCGA-CG-4475 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4476        TCGA-CG-4477        TCGA-CG-5716        TCGA-CG-5717 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5718        TCGA-CG-5719        TCGA-CG-5720        TCGA-CG-5721 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5722        TCGA-CG-5723        TCGA-CG-5724        TCGA-CG-5725 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5726        TCGA-CG-5732        TCGA-CG-5734        TCGA-D7-5577 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-5578        TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6521        TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6526        TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6817        TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8570        TCGA-D7-8572        TCGA-D7-8573        TCGA-D7-8574 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8575        TCGA-D7-8576        TCGA-D7-8578        TCGA-D7-8579 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV        TCGA-D7-A4YX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6EV        TCGA-D7-A6EX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0        TCGA-D7-A6F2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A747        TCGA-D7-A748        TCGA-D7-A74A        TCGA-EQ-8122 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-EQ-A4SO        TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-F1-A448        TCGA-F1-A72C        TCGA-FP-7735        TCGA-FP-7829 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-7916        TCGA-FP-7998        TCGA-FP-8099        TCGA-FP-8209 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631        TCGA-FP-A4BE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-A4BF        TCGA-FP-A8CX        TCGA-FP-A9TM        TCGA-HF-7131 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-7132        TCGA-HF-7133        TCGA-HF-7134        TCGA-HF-7136 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-A5NB        TCGA-HJ-7597        TCGA-HU-8238        TCGA-HU-8243 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8244        TCGA-HU-8249        TCGA-HU-8602        TCGA-HU-8604 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8608        TCGA-HU-8610        TCGA-HU-A4G2        TCGA-HU-A4G3 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4G6        TCGA-HU-A4G8        TCGA-HU-A4G9        TCGA-HU-A4GC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GD        TCGA-HU-A4GF        TCGA-HU-A4GH        TCGA-HU-A4GJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GN        TCGA-HU-A4GP        TCGA-HU-A4GQ        TCGA-HU-A4GT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GU        TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H2        TCGA-HU-A4H3        TCGA-HU-A4H4        TCGA-HU-A4H5 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H6        TCGA-HU-A4H8        TCGA-HU-A4HB        TCGA-HU-A4HD 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8        TCGA-IG-A3QL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A6RN        TCGA-IN-A6RO        TCGA-IN-A6RR        TCGA-IN-A6RS 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A7NR        TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-AB1X        TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FB        TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FH        TCGA-JY-A938        TCGA-JY-A939        TCGA-JY-A93C 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A93D        TCGA-JY-A93E        TCGA-JY-A93F        TCGA-KB-A6F7 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-KB-A93G        TCGA-KB-A93J        TCGA-KH-A6WC        TCGA-L5-A43C 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I        TCGA-L5-A43J 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF        TCGA-L5-A4OG 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OJ        TCGA-L5-A4OM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NG        TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NK        TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NQ        TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NU        TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L7-A6VZ        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49V        TCGA-LN-A49W 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49X        TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A3        TCGA-LN-A4A4        TCGA-LN-A4A5        TCGA-LN-A4A6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A8        TCGA-LN-A4A9        TCGA-LN-A4MQ        TCGA-LN-A4MR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A5U5        TCGA-LN-A5U6        TCGA-LN-A5U7        TCGA-LN-A7HV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A7HW        TCGA-LN-A7HX        TCGA-LN-A7HY        TCGA-LN-A7HZ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A8HZ        TCGA-LN-A8I0        TCGA-LN-A8I1        TCGA-LN-A9FO 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A9FP        TCGA-LN-A9FQ        TCGA-LN-A9FR        TCGA-M9-A5M8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-MX-A5UG        TCGA-MX-A5UJ        TCGA-MX-A663        TCGA-MX-A666 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Q9-A6FU        TCGA-Q9-A6FW        TCGA-R5-A7O7        TCGA-R5-A7ZE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7ZF        TCGA-R5-A7ZI        TCGA-R5-A7ZR        TCGA-R5-A805 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6DN        TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6L6        TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6Y2        TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BT        TCGA-RD-A7BW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N2        TCGA-RD-A8N4        TCGA-RD-A8N5 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N6        TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-S8-A6BW        TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-A7RC        TCGA-V5-A7RE        TCGA-V5-AASV        TCGA-V5-AASW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-AASX        TCGA-VQ-A8DT        TCGA-VQ-A8DU        TCGA-VQ-A8DV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8DZ        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91V        TCGA-VQ-A92D 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68        TCGA-VQ-AA69 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F        TCGA-VQ-AA6G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K        TCGA-VR-A8EO 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER        TCGA-VR-A8ET 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX        TCGA-VR-A8EY 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D        TCGA-VR-AA4G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I        TCGA-X8-AAAR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-XP-A8T6        TCGA-XP-A8T8        TCGA-Z6-A8JD        TCGA-Z6-A8JE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Z6-A9VB        TCGA-Z6-AAPN        TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM116 MUTATED        0      3      0
  TMEM116 WILD-TYPE    159    248    165
D889V7, multiclass
        clus
vv       TMEM116 MUTATED TMEM116 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               3               248
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM116 MUTATED        0      2      1      0      0
  TMEM116 WILD-TYPE    118    129    150     94     81
D889V8, multiclass
        clus
vv       TMEM116 MUTATED TMEM116 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               129
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM116 MUTATED        0      2      0      0      0
  TMEM116 WILD-TYPE    118    134    115     40     71
D889V9, multiclass
[1] "Remove cluster labels:" "TMEM116 MUTATED"       
clus
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                2               478 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7717        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077        TCGA-BR-8078 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8080        TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8370        TCGA-BR-8371 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8372        TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8485 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8590 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J5        TCGA-BR-A4J6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4QI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799        TCGA-CD-5800 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803        TCGA-CD-5804 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525        TCGA-CD-8526 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8527        TCGA-CD-8529        TCGA-CD-8530        TCGA-CD-8531 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534        TCGA-CD-8535 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487        TCGA-CD-A489 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-4449        TCGA-CG-5716 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719        TCGA-CG-5720 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723        TCGA-CG-5724 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727        TCGA-CG-5728 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733        TCGA-CG-5734 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579        TCGA-D7-6518 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521        TCGA-D7-6522 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526        TCGA-D7-6527 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576        TCGA-D7-8578 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6ET        TCGA-D7-A6EV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6EX        TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6F2        TCGA-D7-A747        TCGA-D7-A748        TCGA-D7-A74A 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A74B        TCGA-EQ-5647        TCGA-EQ-8122        TCGA-F1-6177 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448        TCGA-FP-7735 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-7829        TCGA-FP-7998        TCGA-FP-8099        TCGA-FP-8209 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631        TCGA-FP-A4BE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7134 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-7136        TCGA-HU-8238        TCGA-HU-8243        TCGA-HU-8602 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-A4G3        TCGA-HU-A4G8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF        TCGA-HU-A4GH 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GQ        TCGA-HU-A4GT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H2        TCGA-HU-A4H4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8        TCGA-HU-A4HB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8        TCGA-IG-A3QL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A6RN        TCGA-IN-A6RP        TCGA-IN-A7NR        TCGA-IN-A7NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X        TCGA-IP-7968 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB        TCGA-JY-A6FD 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH        TCGA-JY-A938 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D        TCGA-JY-A93E 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93J        TCGA-KH-A6WC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NG        TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NK        TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NQ        TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NU        TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L7-A6VZ        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49W        TCGA-LN-A49X 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8        TCGA-LN-A4A9 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5        TCGA-LN-A5U6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW        TCGA-LN-A7HX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-MX-A5UJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU        TCGA-Q9-A6FW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF        TCGA-R5-A7ZI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7ZR        TCGA-R5-A804        TCGA-R5-A805        TCGA-R6-A6DN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WG        TCGA-RD-A7BS 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A7BW        TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N0        TCGA-RD-A8N1        TCGA-RD-A8N5        TCGA-RD-A8N6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-A7RE        TCGA-V5-AASW        TCGA-V5-AASX        TCGA-VQ-A8DL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8DV        TCGA-VQ-A8E2        TCGA-VQ-A8E7 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8P2        TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8PM        TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91V 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM116 MUTATED        0      2      0      0      0
  TMEM116 WILD-TYPE     48    107    130    101     92
D889V10, multiclass
[1] "Remove cluster labels:" "TMEM116 MUTATED"       
clus
  TMEM116 MUTATED TMEM116 WILD-TYPE 
                2               478 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7717        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077        TCGA-BR-8078 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8080        TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8370        TCGA-BR-8371 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8372        TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8485 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8590 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J5        TCGA-BR-A4J6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4QI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799        TCGA-CD-5800 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803        TCGA-CD-5804 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525        TCGA-CD-8526 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8527        TCGA-CD-8529        TCGA-CD-8530        TCGA-CD-8531 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534        TCGA-CD-8535 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487        TCGA-CD-A489 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH        TCGA-CD-A4MI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-4449        TCGA-CG-5716 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719        TCGA-CG-5720 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723        TCGA-CG-5724 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727        TCGA-CG-5728 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733        TCGA-CG-5734 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579        TCGA-D7-6518 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521        TCGA-D7-6522 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526        TCGA-D7-6527 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817        TCGA-D7-6818 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570        TCGA-D7-8572 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576        TCGA-D7-8578 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU        TCGA-D7-A4YV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6ET        TCGA-D7-A6EV 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6EX        TCGA-D7-A6EY        TCGA-D7-A6EZ        TCGA-D7-A6F0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A6F2        TCGA-D7-A747        TCGA-D7-A748        TCGA-D7-A74A 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-D7-A74B        TCGA-EQ-5647        TCGA-EQ-8122        TCGA-F1-6177 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448        TCGA-FP-7735 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-7829        TCGA-FP-7998        TCGA-FP-8099        TCGA-FP-8209 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631        TCGA-FP-A4BE 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132        TCGA-HF-7134 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HF-7136        TCGA-HU-8238        TCGA-HU-8243        TCGA-HU-8602 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-A4G3        TCGA-HU-A4G8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF        TCGA-HU-A4GH 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GQ        TCGA-HU-A4GT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H2        TCGA-HU-A4H4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8        TCGA-HU-A4HB 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8        TCGA-IG-A3QL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB        TCGA-IG-A3YC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT        TCGA-IG-A50L 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3        TCGA-IG-A625 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2        TCGA-IG-A97H 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808        TCGA-IN-8462 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ        TCGA-IN-A6RL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A6RN        TCGA-IN-A6RP        TCGA-IN-A7NR        TCGA-IN-A7NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X        TCGA-IP-7968 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB        TCGA-JY-A6FD 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH        TCGA-JY-A938 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D        TCGA-JY-A93E 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93J        TCGA-KH-A6WC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H        TCGA-L5-A43I 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE        TCGA-L5-A4OF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OI        TCGA-L5-A4OM 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NF 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NG        TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NK        TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NQ        TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L5-A8NU        TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-L7-A6VZ        TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49N        TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49S        TCGA-LN-A49U        TCGA-LN-A49W        TCGA-LN-A49X 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A49Y        TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A4 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4A5        TCGA-LN-A4A6        TCGA-LN-A4A8        TCGA-LN-A4A9 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A4MQ        TCGA-LN-A4MR        TCGA-LN-A5U5        TCGA-LN-A5U6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A5U7        TCGA-LN-A7HV        TCGA-LN-A7HW        TCGA-LN-A7HX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A7HY        TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A8I1        TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-LN-A9FR        TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-MX-A5UJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-MX-A663        TCGA-MX-A666        TCGA-Q9-A6FU        TCGA-Q9-A6FW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7O7        TCGA-R5-A7ZE        TCGA-R5-A7ZF        TCGA-R5-A7ZI 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R5-A7ZR        TCGA-R5-A804        TCGA-R5-A805        TCGA-R6-A6DN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6DQ        TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A6XG        TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-R6-A8W5        TCGA-R6-A8W8        TCGA-R6-A8WG        TCGA-RD-A7BS 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A7BW        TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N0        TCGA-RD-A8N1        TCGA-RD-A8N5        TCGA-RD-A8N6 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-RD-A8N9        TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-SW-A7EA        TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-V5-A7RE        TCGA-V5-AASW        TCGA-V5-AASX        TCGA-VQ-A8DL 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8DU        TCGA-VQ-A8DV        TCGA-VQ-A8E2        TCGA-VQ-A8E7 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8P2        TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A8PM        TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91V 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"TMEM116 WILD-TYPE" "TMEM116 WILD-TYPE" 

Clustering(890) Variable = DNER MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNER MUTATED        5      3      3      7
  DNER WILD-TYPE    130     89    169    169
D890V1, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3             89
  CLUS_3            3            169
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DNER MUTATED       12      1      3
  DNER WILD-TYPE    203    154    159
D890V2, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1           12            203
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNER MUTATED        6      3      3      3
  DNER WILD-TYPE    129    121    122     57
D890V3, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            6            129
  CLUS_2            3            121
  CLUS_3            3            122
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DNER MUTATED        9      3      3
  DNER WILD-TYPE    244     99     86
D890V4, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            9            244
  CLUS_2            3             99
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DNER MUTATED        4      8      5
  DNER WILD-TYPE    160    239    138
D890V5, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            4            160
  CLUS_2            8            239
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNER MUTATED        1      6      3      3      4
  DNER WILD-TYPE    120     98     88    118    113
D890V6, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            1            120
  CLUS_2            6             98
  CLUS_3            3             88
  CLUS_4            3            118
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DNER MUTATED        1      9      8
  DNER WILD-TYPE    158    242    157
D890V7, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            1            158
  CLUS_2            9            242
  CLUS_3            8            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNER MUTATED        2      5      7      1      3
  DNER WILD-TYPE    116    126    144     93     78
D890V8, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNER MUTATED        1      6      5      1      1
  DNER WILD-TYPE    117    130    110     39     70
D890V9, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            130
  CLUS_3            5            110
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNER MUTATED        0      3      5      5      1
  DNER WILD-TYPE     48    106    125     96     91
D890V10, multiclass
        clus
vv       DNER MUTATED DNER WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            5            125
  CLUS_4            5             96
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(891) Variable = TEX15 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TEX15 MUTATED        6      4      7     17
  TEX15 WILD-TYPE    129     88    165    159
D891V1, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4              88
  CLUS_3             7             165
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TEX15 MUTATED       19      5      3
  TEX15 WILD-TYPE    196    150    159
D891V2, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1            19             196
  CLUS_2             5             150
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TEX15 MUTATED       11     10      3      4
  TEX15 WILD-TYPE    124    114    122     56
D891V3, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            10             114
  CLUS_3             3             122
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TEX15 MUTATED       20      7      1
  TEX15 WILD-TYPE    233     95     88
D891V4, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1            20             233
  CLUS_2             7              95
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TEX15 MUTATED        4     20      8
  TEX15 WILD-TYPE    160    227    135
D891V5, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            20             227
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TEX15 MUTATED        5     12      9      2      4
  TEX15 WILD-TYPE    116     92     82    119    113
D891V6, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             5             116
  CLUS_2            12              92
  CLUS_3             9              82
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TEX15 MUTATED        7     20      7
  TEX15 WILD-TYPE    152    231    158
D891V7, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            20             231
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TEX15 MUTATED        3     16     10      3      2
  TEX15 WILD-TYPE    115    115    141     91     79
D891V8, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            16             115
  CLUS_3            10             141
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TEX15 MUTATED        4     10      5      2      5
  TEX15 WILD-TYPE    114    126    110     38     66
D891V9, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            10             126
  CLUS_3             5             110
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TEX15 MUTATED        3     10      7      3      3
  TEX15 WILD-TYPE     45     99    123     98     89
D891V10, multiclass
        clus
vv       TEX15 MUTATED TEX15 WILD-TYPE
  CLUS_1             3              45
  CLUS_2            10              99
  CLUS_3             7             123
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(892) Variable = C1ORF63 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF63 MUTATED        0      1      0      2
  C1ORF63 WILD-TYPE    135     91    172    174
D892V1, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF63 MUTATED        1      1      1
  C1ORF63 WILD-TYPE    214    154    161
D892V2, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               1               214
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF63 MUTATED        0      2      1      0
  C1ORF63 WILD-TYPE    135    122    124     60
D892V3, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF63 MUTATED        2      1      0
  C1ORF63 WILD-TYPE    251    101     89
D892V4, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               2               251
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF63 MUTATED        0      2      1
  C1ORF63 WILD-TYPE    164    245    142
D892V5, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               2               245
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF63 MUTATED        0      1      2      0      0
  C1ORF63 WILD-TYPE    121    103     89    121    117
D892V6, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               0               121
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C1ORF63 MUTATED        0      3      0
  C1ORF63 WILD-TYPE    159    248    165
D892V7, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               3               248
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF63 MUTATED        1      1      1      0      0
  C1ORF63 WILD-TYPE    117    130    150     94     81
D892V8, multiclass
        clus
vv       C1ORF63 MUTATED C1ORF63 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF63 MUTATED        0      2      0      0      0
  C1ORF63 WILD-TYPE    118    134    115     40     71
D892V9, multiclass
[1] "Remove cluster labels:" "C1ORF63 MUTATED"       
clus
  C1ORF63 MUTATED C1ORF63 WILD-TYPE 
                2               478 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-7717        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077        TCGA-BR-8078 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8080        TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8370        TCGA-BR-8371 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8372        TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8485 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8590 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J5        TCGA-BR-A4J6 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4QI 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8529        TCGA-CD-8530 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-A489        TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-A4MI        TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-4449 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A4YV        TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6ET 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY        TCGA-D7-A6EZ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747        TCGA-D7-A748 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A74A        TCGA-D7-A74B        TCGA-EQ-5647        TCGA-EQ-8122 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7998        TCGA-FP-8099 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-FP-8209        TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-FP-A4BE        TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HU-8238        TCGA-HU-8243 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-A4G3 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4G8        TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H2 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4HB        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A97H        TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IN-8462        TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IN-A6RL        TCGA-IN-A6RN        TCGA-IN-A6RP        TCGA-IN-A7NR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-JY-A938        TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93J 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-KH-A6WC        TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A43I        TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4OF        TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OM 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NG 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN        TCGA-L5-A8NQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT        TCGA-L5-A8NU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49W        TCGA-LN-A49X        TCGA-LN-A49Y 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A4        TCGA-LN-A4A5 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A4A6        TCGA-LN-A4A8        TCGA-LN-A4A9        TCGA-LN-A4MQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A4MR        TCGA-LN-A5U5        TCGA-LN-A5U6        TCGA-LN-A5U7 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A7HV        TCGA-LN-A7HW        TCGA-LN-A7HX        TCGA-LN-A7HY 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0        TCGA-LN-A8I1 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ        TCGA-LN-A9FR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-MX-A5UJ        TCGA-MX-A663 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-MX-A666        TCGA-Q9-A6FU        TCGA-Q9-A6FW        TCGA-R5-A7O7 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R5-A7ZE        TCGA-R5-A7ZF        TCGA-R5-A7ZI        TCGA-R5-A7ZR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R5-A804        TCGA-R5-A805        TCGA-R6-A6DN        TCGA-R6-A6DQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6        TCGA-R6-A6XG 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2        TCGA-R6-A8W5 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R6-A8W8        TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BW 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N5        TCGA-RD-A8N6        TCGA-RD-A8N9 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW        TCGA-SW-A7EA 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC        TCGA-V5-A7RE 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-V5-AASW        TCGA-V5-AASX        TCGA-VQ-A8DL        TCGA-VQ-A8DU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A8DV        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF63 MUTATED        0      2      0      0      0
  C1ORF63 WILD-TYPE     48    107    130    101     92
D892V10, multiclass
[1] "Remove cluster labels:" "C1ORF63 MUTATED"       
clus
  C1ORF63 MUTATED C1ORF63 WILD-TYPE 
                2               478 
       TCGA-2H-A9GF        TCGA-2H-A9GG        TCGA-2H-A9GH        TCGA-2H-A9GI 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-2H-A9GJ        TCGA-2H-A9GK        TCGA-2H-A9GL        TCGA-2H-A9GM 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-2H-A9GN        TCGA-2H-A9GO        TCGA-2H-A9GQ        TCGA-2H-A9GR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-B7-5816        TCGA-B7-5818        TCGA-B7-A5TI        TCGA-B7-A5TJ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-B7-A5TK        TCGA-B7-A5TN        TCGA-BR-6452        TCGA-BR-6453 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6454        TCGA-BR-6455        TCGA-BR-6456        TCGA-BR-6457 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6458        TCGA-BR-6563        TCGA-BR-6564        TCGA-BR-6565 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6566        TCGA-BR-6705        TCGA-BR-6706        TCGA-BR-6707 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6709        TCGA-BR-6710        TCGA-BR-6801        TCGA-BR-6802 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-6803        TCGA-BR-6852        TCGA-BR-7196        TCGA-BR-7197 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-7703        TCGA-BR-7704        TCGA-BR-7707        TCGA-BR-7715 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-7717        TCGA-BR-7723        TCGA-BR-7851        TCGA-BR-7901 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-7957        TCGA-BR-7958        TCGA-BR-7959        TCGA-BR-8058 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8059        TCGA-BR-8060        TCGA-BR-8077        TCGA-BR-8078 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8080        TCGA-BR-8284        TCGA-BR-8286        TCGA-BR-8289 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8291        TCGA-BR-8295        TCGA-BR-8297        TCGA-BR-8360 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8361        TCGA-BR-8363        TCGA-BR-8364        TCGA-BR-8365 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8368        TCGA-BR-8369        TCGA-BR-8370        TCGA-BR-8371 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8372        TCGA-BR-8373        TCGA-BR-8380        TCGA-BR-8381 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8382        TCGA-BR-8384        TCGA-BR-8483        TCGA-BR-8485 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8486        TCGA-BR-8487        TCGA-BR-8588        TCGA-BR-8590 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8591        TCGA-BR-8592        TCGA-BR-8676        TCGA-BR-8677 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8678        TCGA-BR-8679        TCGA-BR-8680        TCGA-BR-8682 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-8683        TCGA-BR-8687        TCGA-BR-8690        TCGA-BR-A44T 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A452        TCGA-BR-A453        TCGA-BR-A4CQ        TCGA-BR-A4CR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4CS        TCGA-BR-A4IU        TCGA-BR-A4IV        TCGA-BR-A4IY 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4IZ        TCGA-BR-A4J1        TCGA-BR-A4J5        TCGA-BR-A4J6 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4J7        TCGA-BR-A4J8        TCGA-BR-A4PD        TCGA-BR-A4QI 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-BR-A4QL        TCGA-BR-A4QM        TCGA-CD-5798        TCGA-CD-5799 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-5800        TCGA-CD-5801        TCGA-CD-5802        TCGA-CD-5803 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-5804        TCGA-CD-5813        TCGA-CD-8524        TCGA-CD-8525 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-8526        TCGA-CD-8527        TCGA-CD-8529        TCGA-CD-8530 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-8531        TCGA-CD-8532        TCGA-CD-8533        TCGA-CD-8534 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-8535        TCGA-CD-8536        TCGA-CD-A486        TCGA-CD-A487 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-A489        TCGA-CD-A48C        TCGA-CD-A4MG        TCGA-CD-A4MH 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CD-A4MI        TCGA-CG-4437        TCGA-CG-4441        TCGA-CG-4449 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5716        TCGA-CG-5717        TCGA-CG-5718        TCGA-CG-5719 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5720        TCGA-CG-5721        TCGA-CG-5722        TCGA-CG-5723 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5724        TCGA-CG-5725        TCGA-CG-5726        TCGA-CG-5727 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5728        TCGA-CG-5730        TCGA-CG-5732        TCGA-CG-5733 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-CG-5734        TCGA-D7-5577        TCGA-D7-5578        TCGA-D7-5579 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6518        TCGA-D7-6519        TCGA-D7-6520        TCGA-D7-6521 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6522        TCGA-D7-6524        TCGA-D7-6525        TCGA-D7-6526 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6527        TCGA-D7-6528        TCGA-D7-6815        TCGA-D7-6817 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-6818        TCGA-D7-6820        TCGA-D7-6822        TCGA-D7-8570 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-8572        TCGA-D7-8574        TCGA-D7-8575        TCGA-D7-8576 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-8578        TCGA-D7-8579        TCGA-D7-A4YT        TCGA-D7-A4YU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A4YV        TCGA-D7-A4YY        TCGA-D7-A4Z0        TCGA-D7-A6ET 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A6EV        TCGA-D7-A6EX        TCGA-D7-A6EY        TCGA-D7-A6EZ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A6F0        TCGA-D7-A6F2        TCGA-D7-A747        TCGA-D7-A748 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-D7-A74A        TCGA-D7-A74B        TCGA-EQ-5647        TCGA-EQ-8122 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-F1-6177        TCGA-F1-6874        TCGA-F1-6875        TCGA-F1-A448 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-FP-7735        TCGA-FP-7829        TCGA-FP-7998        TCGA-FP-8099 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-FP-8209        TCGA-FP-8210        TCGA-FP-8211        TCGA-FP-8631 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-FP-A4BE        TCGA-FP-A9TM        TCGA-HF-7131        TCGA-HF-7132 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HF-7134        TCGA-HF-7136        TCGA-HU-8238        TCGA-HU-8243 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-8602        TCGA-HU-8604        TCGA-HU-8608        TCGA-HU-A4G3 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4G8        TCGA-HU-A4GC        TCGA-HU-A4GD        TCGA-HU-A4GF 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4GH        TCGA-HU-A4GJ        TCGA-HU-A4GN        TCGA-HU-A4GQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4GT        TCGA-HU-A4GX        TCGA-HU-A4GY        TCGA-HU-A4H2 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4H4        TCGA-HU-A4H5        TCGA-HU-A4H6        TCGA-HU-A4H8 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-HU-A4HB        TCGA-IC-A6RE        TCGA-IC-A6RF        TCGA-IG-A3I8 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A3QL        TCGA-IG-A3Y9        TCGA-IG-A3YA        TCGA-IG-A3YB 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A3YC        TCGA-IG-A4P3        TCGA-IG-A4QS        TCGA-IG-A4QT 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A50L        TCGA-IG-A51D        TCGA-IG-A5B8        TCGA-IG-A5S3 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A625        TCGA-IG-A6QS        TCGA-IG-A7DP        TCGA-IG-A8O2 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IG-A97H        TCGA-IG-A97I        TCGA-IN-7806        TCGA-IN-7808 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IN-8462        TCGA-IN-8663        TCGA-IN-A6RI        TCGA-IN-A6RJ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IN-A6RL        TCGA-IN-A6RN        TCGA-IN-A6RP        TCGA-IN-A7NR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IN-A7NT        TCGA-IN-A7NU        TCGA-IN-AB1V        TCGA-IN-AB1X 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-IP-7968        TCGA-JY-A6F8        TCGA-JY-A6FA        TCGA-JY-A6FB 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-JY-A6FD        TCGA-JY-A6FE        TCGA-JY-A6FG        TCGA-JY-A6FH 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-JY-A938        TCGA-JY-A939        TCGA-JY-A93C        TCGA-JY-A93D 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-JY-A93E        TCGA-KB-A6F5        TCGA-KB-A6F7        TCGA-KB-A93J 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-KH-A6WC        TCGA-L5-A43C        TCGA-L5-A43E        TCGA-L5-A43H 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A43I        TCGA-L5-A43J        TCGA-L5-A43M        TCGA-L5-A4OE 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4OF        TCGA-L5-A4OG        TCGA-L5-A4OH        TCGA-L5-A4OM 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4ON        TCGA-L5-A4OO        TCGA-L5-A4OP        TCGA-L5-A4OQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4OR        TCGA-L5-A4OS        TCGA-L5-A4OT        TCGA-L5-A4OU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A4OW        TCGA-L5-A4OX        TCGA-L5-A88S        TCGA-L5-A88T 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A88V        TCGA-L5-A88W        TCGA-L5-A88Y        TCGA-L5-A88Z 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A891        TCGA-L5-A893        TCGA-L5-A8NE        TCGA-L5-A8NG 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NH        TCGA-L5-A8NI        TCGA-L5-A8NJ        TCGA-L5-A8NK 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NL        TCGA-L5-A8NM        TCGA-L5-A8NN        TCGA-L5-A8NQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NR        TCGA-L5-A8NS        TCGA-L5-A8NT        TCGA-L5-A8NU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-L5-A8NV        TCGA-L5-A8NW        TCGA-L7-A56G        TCGA-L7-A6VZ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A49K        TCGA-LN-A49L        TCGA-LN-A49M        TCGA-LN-A49N 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A49O        TCGA-LN-A49P        TCGA-LN-A49R        TCGA-LN-A49S 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A49U        TCGA-LN-A49W        TCGA-LN-A49X        TCGA-LN-A49Y 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A4A1        TCGA-LN-A4A2        TCGA-LN-A4A4        TCGA-LN-A4A5 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A4A6        TCGA-LN-A4A8        TCGA-LN-A4A9        TCGA-LN-A4MQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A4MR        TCGA-LN-A5U5        TCGA-LN-A5U6        TCGA-LN-A5U7 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A7HV        TCGA-LN-A7HW        TCGA-LN-A7HX        TCGA-LN-A7HY 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A7HZ        TCGA-LN-A8HZ        TCGA-LN-A8I0        TCGA-LN-A8I1 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-LN-A9FO        TCGA-LN-A9FP        TCGA-LN-A9FQ        TCGA-LN-A9FR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-M9-A5M8        TCGA-MX-A5UG        TCGA-MX-A5UJ        TCGA-MX-A663 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-MX-A666        TCGA-Q9-A6FU        TCGA-Q9-A6FW        TCGA-R5-A7O7 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R5-A7ZE        TCGA-R5-A7ZF        TCGA-R5-A7ZI        TCGA-R5-A7ZR 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R5-A804        TCGA-R5-A805        TCGA-R6-A6DN        TCGA-R6-A6DQ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R6-A6KZ        TCGA-R6-A6L4        TCGA-R6-A6L6        TCGA-R6-A6XG 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R6-A6XQ        TCGA-R6-A6Y0        TCGA-R6-A6Y2        TCGA-R6-A8W5 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-R6-A8W8        TCGA-R6-A8WG        TCGA-RD-A7BS        TCGA-RD-A7BW 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-RD-A7C1        TCGA-RD-A8MV        TCGA-RD-A8MW        TCGA-RD-A8N0 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-RD-A8N1        TCGA-RD-A8N5        TCGA-RD-A8N6        TCGA-RD-A8N9 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-RE-A7BO        TCGA-S8-A6BV        TCGA-S8-A6BW        TCGA-SW-A7EA 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-SW-A7EB        TCGA-V5-A7RB        TCGA-V5-A7RC        TCGA-V5-A7RE 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-V5-AASW        TCGA-V5-AASX        TCGA-VQ-A8DL        TCGA-VQ-A8DU 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A8DV        TCGA-VQ-A8E2        TCGA-VQ-A8E7        TCGA-VQ-A8P2 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A8P3        TCGA-VQ-A8PE        TCGA-VQ-A8PK        TCGA-VQ-A8PM 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A8PQ        TCGA-VQ-A91Q        TCGA-VQ-A91U        TCGA-VQ-A91V 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-A92D        TCGA-VQ-A94T        TCGA-VQ-AA64        TCGA-VQ-AA68 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-AA69        TCGA-VQ-AA6A        TCGA-VQ-AA6B        TCGA-VQ-AA6F 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VQ-AA6G        TCGA-VQ-AA6I        TCGA-VQ-AA6J        TCGA-VQ-AA6K 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-A8EO        TCGA-VR-A8EP        TCGA-VR-A8EQ        TCGA-VR-A8ER 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-A8ET        TCGA-VR-A8EU        TCGA-VR-A8EW        TCGA-VR-A8EX 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-A8EY        TCGA-VR-A8EZ        TCGA-VR-A8Q7        TCGA-VR-AA4D 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-VR-AA4G        TCGA-VR-AA7B        TCGA-VR-AA7D        TCGA-VR-AA7I 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-X8-AAAR        TCGA-XP-A8T6        TCGA-XP-A8T7        TCGA-XP-A8T8 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-Z6-A8JD        TCGA-Z6-A8JE        TCGA-Z6-A9VB        TCGA-Z6-AAPN 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 
       TCGA-ZA-A8F6        TCGA-ZR-A9CJ 
"C1ORF63 WILD-TYPE" "C1ORF63 WILD-TYPE" 

Clustering(893) Variable = FOLH1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FOLH1 MUTATED        4      3      4     13
  FOLH1 WILD-TYPE    131     89    168    163
D893V1, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3              89
  CLUS_3             4             168
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOLH1 MUTATED       14      4      3
  FOLH1 WILD-TYPE    201    151    159
D893V2, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FOLH1 MUTATED       11      8      2      1
  FOLH1 WILD-TYPE    124    116    123     59
D893V3, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1            11             124
  CLUS_2             8             116
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOLH1 MUTATED       15      6      1
  FOLH1 WILD-TYPE    238     96     88
D893V4, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1            15             238
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOLH1 MUTATED        5     10      6
  FOLH1 WILD-TYPE    159    237    137
D893V5, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            10             237
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOLH1 MUTATED        2      5      6      4      4
  FOLH1 WILD-TYPE    119     99     85    117    113
D893V6, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             5              99
  CLUS_3             6              85
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FOLH1 MUTATED        3     14      7
  FOLH1 WILD-TYPE    156    237    158
D893V7, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            14             237
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOLH1 MUTATED        4      8      6      3      3
  FOLH1 WILD-TYPE    114    123    145     91     78
D893V8, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             123
  CLUS_3             6             145
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOLH1 MUTATED        4      6      5      0      5
  FOLH1 WILD-TYPE    114    130    110     40     66
D893V9, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             6             130
  CLUS_3             5             110
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FOLH1 MUTATED        1      8      4      4      3
  FOLH1 WILD-TYPE     47    101    126     97     89
D893V10, multiclass
        clus
vv       FOLH1 MUTATED FOLH1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             8             101
  CLUS_3             4             126
  CLUS_4             4              97
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(894) Variable = MOCS2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MOCS2 MUTATED        0      1      3      4
  MOCS2 WILD-TYPE    135     91    169    172
D894V1, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MOCS2 MUTATED        4      1      0
  MOCS2 WILD-TYPE    211    154    162
D894V2, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MOCS2 MUTATED        1      3      1      1
  MOCS2 WILD-TYPE    134    121    124     59
D894V3, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MOCS2 MUTATED        4      1      1
  MOCS2 WILD-TYPE    249    101     88
D894V4, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MOCS2 MUTATED        1      5      2
  MOCS2 WILD-TYPE    163    242    141
D894V5, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOCS2 MUTATED        0      3      2      1      2
  MOCS2 WILD-TYPE    121    101     89    120    115
D894V6, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MOCS2 MUTATED        1      6      1
  MOCS2 WILD-TYPE    158    245    164
D894V7, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOCS2 MUTATED        0      3      4      1      0
  MOCS2 WILD-TYPE    118    128    147     93     81
D894V8, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOCS2 MUTATED        1      4      0      0      0
  MOCS2 WILD-TYPE    117    132    115     40     71
D894V9, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MOCS2 MUTATED        0      3      1      0      1
  MOCS2 WILD-TYPE     48    106    129    101     91
D894V10, multiclass
        clus
vv       MOCS2 MUTATED MOCS2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(895) Variable = MICALL1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MICALL1 MUTATED        3      2      3      2
  MICALL1 WILD-TYPE    132     90    169    174
D895V1, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2                90
  CLUS_3               3               169
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALL1 MUTATED        5      4      1
  MICALL1 WILD-TYPE    210    151    161
D895V2, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               4               151
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MICALL1 MUTATED        5      2      0      2
  MICALL1 WILD-TYPE    130    122    125     58
D895V3, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALL1 MUTATED        6      3      0
  MICALL1 WILD-TYPE    247     99     89
D895V4, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALL1 MUTATED        3      6      1
  MICALL1 WILD-TYPE    161    241    142
D895V5, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALL1 MUTATED        2      2      3      2      1
  MICALL1 WILD-TYPE    119    102     88    119    116
D895V6, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               3                88
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MICALL1 MUTATED        3      6      1
  MICALL1 WILD-TYPE    156    245    164
D895V7, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               6               245
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALL1 MUTATED        2      2      3      3      0
  MICALL1 WILD-TYPE    116    129    148     91     81
D895V8, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               129
  CLUS_3               3               148
  CLUS_4               3                91
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALL1 MUTATED        4      4      2      0      0
  MICALL1 WILD-TYPE    114    132    113     40     71
D895V9, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MICALL1 MUTATED        1      2      3      1      3
  MICALL1 WILD-TYPE     47    107    127    100     89
D895V10, multiclass
        clus
vv       MICALL1 MUTATED MICALL1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(896) Variable = CLCA4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCA4 MUTATED        2      1      2     13
  CLCA4 WILD-TYPE    133     91    170    163
D896V1, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCA4 MUTATED        9      3      4
  CLCA4 WILD-TYPE    206    152    158
D896V2, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             3             152
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLCA4 MUTATED        4     10      3      0
  CLCA4 WILD-TYPE    131    114    122     60
D896V3, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             4             131
  CLUS_2            10             114
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCA4 MUTATED        7      6      4
  CLCA4 WILD-TYPE    246     96     85
D896V4, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             6              96
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCA4 MUTATED        3     10      6
  CLCA4 WILD-TYPE    161    237    137
D896V5, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            10             237
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLCA4 MUTATED        3      1      7      1      7
  CLCA4 WILD-TYPE    118    103     84    120    110
D896V6, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CLCA4 MUTATED        2     13      4
  CLCA4 WILD-TYPE    157    238    161
D896V7, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            13             238
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLCA4 MUTATED        2      6      8      0      3
  CLCA4 WILD-TYPE    116    125    143     94     78
D896V8, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLCA4 MUTATED        1      6      2      0      6
  CLCA4 WILD-TYPE    117    130    113     40     65
D896V9, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLCA4 MUTATED        1      3     11      0      0
  CLCA4 WILD-TYPE     47    106    119    101     92
D896V10, multiclass
        clus
vv       CLCA4 MUTATED CLCA4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3            11             119
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(897) Variable = SMO MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMO MUTATED        3      1      2     11
  SMO WILD-TYPE    132     91    170    165
D897V1, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           3           132
  CLUS_2           1            91
  CLUS_3           2           170
  CLUS_4          11           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SMO MUTATED        7      8      2
  SMO WILD-TYPE    208    147    160
D897V2, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           7           208
  CLUS_2           8           147
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMO MUTATED        4      5      2      3
  SMO WILD-TYPE    131    119    123     57
D897V3, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           4           131
  CLUS_2           5           119
  CLUS_3           2           123
  CLUS_4           3            57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SMO MUTATED        6      6      2
  SMO WILD-TYPE    247     96     87
D897V4, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           6           247
  CLUS_2           6            96
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SMO MUTATED        4     10      3
  SMO WILD-TYPE    160    237    140
D897V5, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           4           160
  CLUS_2          10           237
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMO MUTATED        6      4      5      1      1
  SMO WILD-TYPE    115    100     86    120    116
D897V6, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           6           115
  CLUS_2           4           100
  CLUS_3           5            86
  CLUS_4           1           120
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SMO MUTATED        3     13      2
  SMO WILD-TYPE    156    238    163
D897V7, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           3           156
  CLUS_2          13           238
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMO MUTATED        7      5      4      1      1
  SMO WILD-TYPE    111    126    147     93     80
D897V8, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           7           111
  CLUS_2           5           126
  CLUS_3           4           147
  CLUS_4           1            93
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMO MUTATED        5      5      1      2      4
  SMO WILD-TYPE    113    131    114     38     67
D897V9, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           5           113
  CLUS_2           5           131
  CLUS_3           1           114
  CLUS_4           2            38
  CLUS_5           4            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMO MUTATED        6      5      4      1      1
  SMO WILD-TYPE     42    104    126    100     91
D897V10, multiclass
        clus
vv       SMO MUTATED SMO WILD-TYPE
  CLUS_1           6            42
  CLUS_2           5           104
  CLUS_3           4           126
  CLUS_4           1           100
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(898) Variable = MSL1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MSL1 MUTATED        2      1      1      3
  MSL1 WILD-TYPE    133     91    171    173
D898V1, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL1 MUTATED        2      2      1
  MSL1 WILD-TYPE    213    153    161
D898V2, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            2            213
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MSL1 MUTATED        0      2      1      1
  MSL1 WILD-TYPE    135    122    124     59
D898V3, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2            122
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL1 MUTATED        1      2      1
  MSL1 WILD-TYPE    252    100     88
D898V4, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL1 MUTATED        1      3      3
  MSL1 WILD-TYPE    163    244    140
D898V5, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL1 MUTATED        4      1      1      0      1
  MSL1 WILD-TYPE    117    103     90    121    116
D898V6, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            1            103
  CLUS_3            1             90
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL1 MUTATED        2      3      2
  MSL1 WILD-TYPE    157    248    163
D898V7, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL1 MUTATED        2      2      2      0      1
  MSL1 WILD-TYPE    116    129    149     94     80
D898V8, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL1 MUTATED        1      2      2      0      0
  MSL1 WILD-TYPE    117    134    113     40     71
D898V9, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL1 MUTATED        0      3      1      1      0
  MSL1 WILD-TYPE     48    106    129    100     92
D898V10, multiclass
        clus
vv       MSL1 MUTATED MSL1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(899) Variable = IRS4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        5      3      3     17
  IRS4 WILD-TYPE    130     89    169    159
D899V1, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3             89
  CLUS_3            3            169
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED       15      4      5
  IRS4 WILD-TYPE    200    151    157
D899V2, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1           15            200
  CLUS_2            4            151
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRS4 MUTATED        7     10      0      2
  IRS4 WILD-TYPE    128    114    125     58
D899V3, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            7            128
  CLUS_2           10            114
  CLUS_3            0            125
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED       13      6      0
  IRS4 WILD-TYPE    240     96     89
D899V4, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            6             96
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        7     16      4
  IRS4 WILD-TYPE    157    231    139
D899V5, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            7            157
  CLUS_2           16            231
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS4 MUTATED        3      4     12      3      5
  IRS4 WILD-TYPE    118    100     79    118    112
D899V6, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            4            100
  CLUS_3           12             79
  CLUS_4            3            118
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IRS4 MUTATED        6     17      5
  IRS4 WILD-TYPE    153    234    160
D899V7, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            6            153
  CLUS_2           17            234
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS4 MUTATED        4     10      9      2      3
  IRS4 WILD-TYPE    114    121    142     92     78
D899V8, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            4            114
  CLUS_2           10            121
  CLUS_3            9            142
  CLUS_4            2             92
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS4 MUTATED        3      6      4      2      6
  IRS4 WILD-TYPE    115    130    111     38     65
D899V9, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            6            130
  CLUS_3            4            111
  CLUS_4            2             38
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRS4 MUTATED        3      5      9      2      2
  IRS4 WILD-TYPE     45    104    121     99     90
D899V10, multiclass
        clus
vv       IRS4 MUTATED IRS4 WILD-TYPE
  CLUS_1            3             45
  CLUS_2            5            104
  CLUS_3            9            121
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(900) Variable = AARS2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AARS2 MUTATED        6      1      1     13
  AARS2 WILD-TYPE    129     91    171    163
D900V1, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AARS2 MUTATED       14      4      3
  AARS2 WILD-TYPE    201    151    159
D900V2, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AARS2 MUTATED        4      7      3      0
  AARS2 WILD-TYPE    131    117    122     60
D900V3, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             7             117
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AARS2 MUTATED        7      3      4
  AARS2 WILD-TYPE    246     99     85
D900V4, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             3              99
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AARS2 MUTATED        6     11      4
  AARS2 WILD-TYPE    158    236    139
D900V5, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AARS2 MUTATED        4      2      8      3      4
  AARS2 WILD-TYPE    117    102     83    118    113
D900V6, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             2             102
  CLUS_3             8              83
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AARS2 MUTATED        4     15      2
  AARS2 WILD-TYPE    155    236    163
D900V7, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            15             236
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AARS2 MUTATED        2      7      8      3      1
  AARS2 WILD-TYPE    116    124    143     91     80
D900V8, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             8             143
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AARS2 MUTATED        2      8      1      2      5
  AARS2 WILD-TYPE    116    128    114     38     66
D900V9, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             8             128
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AARS2 MUTATED        1      8      6      1      2
  AARS2 WILD-TYPE     47    101    124    100     90
D900V10, multiclass
        clus
vv       AARS2 MUTATED AARS2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             8             101
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(901) Variable = DDHD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDHD1 MUTATED        1      1      2     13
  DDHD1 WILD-TYPE    134     91    170    163
D901V1, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDHD1 MUTATED        9      2      1
  DDHD1 WILD-TYPE    206    153    161
D901V2, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DDHD1 MUTATED        4      8      3      0
  DDHD1 WILD-TYPE    131    116    122     60
D901V3, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             8             116
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDHD1 MUTATED        6      6      3
  DDHD1 WILD-TYPE    247     96     86
D901V4, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             6              96
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDHD1 MUTATED        2      8      6
  DDHD1 WILD-TYPE    162    239    137
D901V5, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDHD1 MUTATED        0      2      8      2      4
  DDHD1 WILD-TYPE    121    102     83    119    113
D901V6, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DDHD1 MUTATED        2     13      2
  DDHD1 WILD-TYPE    157    238    163
D901V7, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            13             238
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDHD1 MUTATED        1      4      9      2      1
  DDHD1 WILD-TYPE    117    127    142     92     80
D901V8, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             9             142
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDHD1 MUTATED        2      4      1      0      4
  DDHD1 WILD-TYPE    116    132    114     40     67
D901V9, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DDHD1 MUTATED        0      4      5      0      2
  DDHD1 WILD-TYPE     48    105    125    101     90
D901V10, multiclass
        clus
vv       DDHD1 MUTATED DDHD1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(902) Variable = PSD MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSD MUTATED        3      0      3     13
  PSD WILD-TYPE    132     92    169    163
D902V1, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           3           132
  CLUS_2           0            92
  CLUS_3           3           169
  CLUS_4          13           163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PSD MUTATED       14      2      2
  PSD WILD-TYPE    201    153    160
D902V2, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1          14           201
  CLUS_2           2           153
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSD MUTATED        6      4      1      2
  PSD WILD-TYPE    129    120    124     58
D902V3, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           6           129
  CLUS_2           4           120
  CLUS_3           1           124
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PSD MUTATED        8      3      2
  PSD WILD-TYPE    245     99     87
D902V4, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           8           245
  CLUS_2           3            99
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PSD MUTATED        2     14      3
  PSD WILD-TYPE    162    233    140
D902V5, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           2           162
  CLUS_2          14           233
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD MUTATED        2      3     10      1      3
  PSD WILD-TYPE    119    101     81    120    114
D902V6, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           2           119
  CLUS_2           3           101
  CLUS_3          10            81
  CLUS_4           1           120
  CLUS_5           3           114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  PSD MUTATED        2     15      2
  PSD WILD-TYPE    157    236    163
D902V7, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           2           157
  CLUS_2          15           236
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD MUTATED        0      9      8      1      1
  PSD WILD-TYPE    118    122    143     93     80
D902V8, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           0           118
  CLUS_2           9           122
  CLUS_3           8           143
  CLUS_4           1            93
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD MUTATED        0      4      2      2      4
  PSD WILD-TYPE    118    132    113     38     67
D902V9, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           0           118
  CLUS_2           4           132
  CLUS_3           2           113
  CLUS_4           2            38
  CLUS_5           4            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSD MUTATED        1      3      6      1      1
  PSD WILD-TYPE     47    106    124    100     91
D902V10, multiclass
        clus
vv       PSD MUTATED PSD WILD-TYPE
  CLUS_1           1            47
  CLUS_2           3           106
  CLUS_3           6           124
  CLUS_4           1           100
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(903) Variable = NOP2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOP2 MUTATED        0      0      1      8
  NOP2 WILD-TYPE    135     92    171    168
D903V1, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOP2 MUTATED        7      0      2
  NOP2 WILD-TYPE    208    155    160
D903V2, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOP2 MUTATED        4      1      1      1
  NOP2 WILD-TYPE    131    123    124     59
D903V3, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1            123
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOP2 MUTATED        5      1      1
  NOP2 WILD-TYPE    248    101     88
D903V4, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOP2 MUTATED        1      6      1
  NOP2 WILD-TYPE    163    241    142
D903V5, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            6            241
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOP2 MUTATED        0      3      3      1      1
  NOP2 WILD-TYPE    121    101     88    120    116
D903V6, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOP2 MUTATED        1      6      2
  NOP2 WILD-TYPE    158    245    163
D903V7, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOP2 MUTATED        0      3      3      1      2
  NOP2 WILD-TYPE    118    128    148     93     79
D903V8, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOP2 MUTATED        0      5      2      1      1
  NOP2 WILD-TYPE    118    131    113     39     70
D903V9, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOP2 MUTATED        0      4      2      2      1
  NOP2 WILD-TYPE     48    105    128     99     91
D903V10, multiclass
        clus
vv       NOP2 MUTATED NOP2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(904) Variable = GPR45 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR45 MUTATED        3      3      3      8
  GPR45 WILD-TYPE    132     89    169    168
D904V1, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR45 MUTATED        9      2      3
  GPR45 WILD-TYPE    206    153    159
D904V2, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR45 MUTATED        3      7      0      1
  GPR45 WILD-TYPE    132    117    125     59
D904V3, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             7             117
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR45 MUTATED        8      3      0
  GPR45 WILD-TYPE    245     99     89
D904V4, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR45 MUTATED        0     11      3
  GPR45 WILD-TYPE    164    236    140
D904V5, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            11             236
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR45 MUTATED        4      5      4      0      1
  GPR45 WILD-TYPE    117     99     87    121    116
D904V6, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR45 MUTATED        2     13      2
  GPR45 WILD-TYPE    157    238    163
D904V7, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            13             238
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR45 MUTATED        4      9      4      0      0
  GPR45 WILD-TYPE    114    122    147     94     81
D904V8, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             122
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR45 MUTATED        1      7      2      0      3
  GPR45 WILD-TYPE    117    129    113     40     68
D904V9, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR45 MUTATED        0      8      3      2      0
  GPR45 WILD-TYPE     48    101    127     99     92
D904V10, multiclass
        clus
vv       GPR45 MUTATED GPR45 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(905) Variable = IFI44 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFI44 MUTATED        1      0      1      4
  IFI44 WILD-TYPE    134     92    171    172
D905V1, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFI44 MUTATED        4      1      0
  IFI44 WILD-TYPE    211    154    162
D905V2, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFI44 MUTATED        3      3      0      0
  IFI44 WILD-TYPE    132    121    125     60
D905V3, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFI44 MUTATED        6      0      0
  IFI44 WILD-TYPE    247    102     89
D905V4, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFI44 MUTATED        2      4      0
  IFI44 WILD-TYPE    162    243    143
D905V5, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI44 MUTATED        1      1      3      1      0
  IFI44 WILD-TYPE    120    103     88    120    117
D905V6, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFI44 MUTATED        1      5      0
  IFI44 WILD-TYPE    158    246    165
D905V7, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI44 MUTATED        0      4      1      1      0
  IFI44 WILD-TYPE    118    127    150     93     81
D905V8, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             1             150
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI44 MUTATED        1      3      0      1      0
  IFI44 WILD-TYPE    117    133    115     39     71
D905V9, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFI44 MUTATED        1      2      1      0      1
  IFI44 WILD-TYPE     47    107    129    101     91
D905V10, multiclass
        clus
vv       IFI44 MUTATED IFI44 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(906) Variable = BEST3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BEST3 MUTATED        1      1      4      8
  BEST3 WILD-TYPE    134     91    168    168
D906V1, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEST3 MUTATED        4      3      3
  BEST3 WILD-TYPE    211    152    159
D906V2, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BEST3 MUTATED        4      5      2      0
  BEST3 WILD-TYPE    131    119    123     60
D906V3, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEST3 MUTATED        8      1      2
  BEST3 WILD-TYPE    245    101     87
D906V4, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEST3 MUTATED        3      9      1
  BEST3 WILD-TYPE    161    238    142
D906V5, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             9             238
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEST3 MUTATED        2      4      4      2      1
  BEST3 WILD-TYPE    119    100     87    119    116
D906V6, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BEST3 MUTATED        3      9      2
  BEST3 WILD-TYPE    156    242    163
D906V7, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEST3 MUTATED        3      5      3      2      1
  BEST3 WILD-TYPE    115    126    148     92     80
D906V8, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             126
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEST3 MUTATED        3      3      2      0      0
  BEST3 WILD-TYPE    115    133    113     40     71
D906V9, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BEST3 MUTATED        0      3      1      2      2
  BEST3 WILD-TYPE     48    106    129     99     90
D906V10, multiclass
        clus
vv       BEST3 MUTATED BEST3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(907) Variable = FLNB MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED        3      3      5     21
  FLNB WILD-TYPE    132     89    167    155
D907V1, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3             89
  CLUS_3            5            167
  CLUS_4           21            155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED       20      2      7
  FLNB WILD-TYPE    195    153    155
D907V2, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1           20            195
  CLUS_2            2            153
  CLUS_3            7            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FLNB MUTATED       10     11      4      1
  FLNB WILD-TYPE    125    113    121     59
D907V3, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1           10            125
  CLUS_2           11            113
  CLUS_3            4            121
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED       15      7      4
  FLNB WILD-TYPE    238     95     85
D907V4, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1           15            238
  CLUS_2            7             95
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        3     20      7
  FLNB WILD-TYPE    161    227    136
D907V5, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            3            161
  CLUS_2           20            227
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FLNB MUTATED        4      6     14      1      5
  FLNB WILD-TYPE    117     98     77    120    112
D907V6, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            4            117
  CLUS_2            6             98
  CLUS_3           14             77
  CLUS_4            1            120
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FLNB MUTATED        4     21      7
  FLNB WILD-TYPE    155    230    158
D907V7, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            4            155
  CLUS_2           21            230
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FLNB MUTATED        2     15     10      1      4
  FLNB WILD-TYPE    116    116    141     93     77
D907V8, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2            116
  CLUS_2           15            116
  CLUS_3           10            141
  CLUS_4            1             93
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FLNB MUTATED        3     11      4      4      4
  FLNB WILD-TYPE    115    125    111     36     67
D907V9, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            3            115
  CLUS_2           11            125
  CLUS_3            4            111
  CLUS_4            4             36
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FLNB MUTATED        2     11      9      3      1
  FLNB WILD-TYPE     46     98    121     98     91
D907V10, multiclass
        clus
vv       FLNB MUTATED FLNB WILD-TYPE
  CLUS_1            2             46
  CLUS_2           11             98
  CLUS_3            9            121
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(908) Variable = KCTD9 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCTD9 MUTATED        0      1      1      9
  KCTD9 WILD-TYPE    135     91    171    167
D908V1, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD9 MUTATED        5      2      1
  KCTD9 WILD-TYPE    210    153    161
D908V2, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCTD9 MUTATED        4      3      2      1
  KCTD9 WILD-TYPE    131    121    123     59
D908V3, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             3             121
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD9 MUTATED        6      2      2
  KCTD9 WILD-TYPE    247    100     87
D908V4, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD9 MUTATED        0      5      4
  KCTD9 WILD-TYPE    164    242    139
D908V5, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             5             242
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD9 MUTATED        1      5      0      0      3
  KCTD9 WILD-TYPE    120     99     91    121    114
D908V6, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             5              99
  CLUS_3             0              91
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCTD9 MUTATED        0      7      4
  KCTD9 WILD-TYPE    159    244    161
D908V7, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD9 MUTATED        0      3      6      0      2
  KCTD9 WILD-TYPE    118    128    145     94     79
D908V8, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD9 MUTATED        0      4      2      0      2
  KCTD9 WILD-TYPE    118    132    113     40     69
D908V9, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCTD9 MUTATED        0      2      5      1      0
  KCTD9 WILD-TYPE     48    107    125    100     92
D908V10, multiclass
        clus
vv       KCTD9 MUTATED KCTD9 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(909) Variable = ERN2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERN2 MUTATED        2      1      4     12
  ERN2 WILD-TYPE    133     91    168    164
D909V1, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            4            168
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERN2 MUTATED        6      5      3
  ERN2 WILD-TYPE    209    150    159
D909V2, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            5            150
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERN2 MUTATED        7      8      0      3
  ERN2 WILD-TYPE    128    116    125     57
D909V3, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            8            116
  CLUS_3            0            125
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERN2 MUTATED       12      6      0
  ERN2 WILD-TYPE    241     96     89
D909V4, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1           12            241
  CLUS_2            6             96
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERN2 MUTATED        7      9      3
  ERN2 WILD-TYPE    157    238    140
D909V5, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            7            157
  CLUS_2            9            238
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERN2 MUTATED        2      3      5      5      4
  ERN2 WILD-TYPE    119    101     86    116    113
D909V6, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            5            116
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERN2 MUTATED        7      8      4
  ERN2 WILD-TYPE    152    243    161
D909V7, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            7            152
  CLUS_2            8            243
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERN2 MUTATED        2      4      8      5      0
  ERN2 WILD-TYPE    116    127    143     89     81
D909V8, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            8            143
  CLUS_4            5             89
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERN2 MUTATED        5      4      1      0      3
  ERN2 WILD-TYPE    113    132    114     40     68
D909V9, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERN2 MUTATED        0      2      7      0      4
  ERN2 WILD-TYPE     48    107    123    101     88
D909V10, multiclass
        clus
vv       ERN2 MUTATED ERN2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            7            123
  CLUS_4            0            101
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(910) Variable = PTGER4 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTGER4 MUTATED        2      3      1      8
  PTGER4 WILD-TYPE    133     89    171    168
D910V1, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3               89
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTGER4 MUTATED        9      2      3
  PTGER4 WILD-TYPE    206    153    159
D910V2, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTGER4 MUTATED        4      4      3      1
  PTGER4 WILD-TYPE    131    120    122     59
D910V3, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTGER4 MUTATED        6      4      2
  PTGER4 WILD-TYPE    247     98     87
D910V4, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              4               98
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTGER4 MUTATED        2      9      4
  PTGER4 WILD-TYPE    162    238    139
D910V5, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              9              238
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTGER4 MUTATED        1      4      4      1      5
  PTGER4 WILD-TYPE    120    100     87    120    112
D910V6, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTGER4 MUTATED        1     11      2
  PTGER4 WILD-TYPE    158    240    163
D910V7, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             11              240
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTGER4 MUTATED        0      5      6      1      2
  PTGER4 WILD-TYPE    118    126    145     93     79
D910V8, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              6              145
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTGER4 MUTATED        1      6      2      2      2
  PTGER4 WILD-TYPE    117    130    113     38     69
D910V9, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTGER4 MUTATED        0      4      5      3      1
  PTGER4 WILD-TYPE     48    105    125     98     91
D910V10, multiclass
        clus
vv       PTGER4 MUTATED PTGER4 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              3               98
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(911) Variable = RUSC2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUSC2 MUTATED        1      2      3     17
  RUSC2 WILD-TYPE    134     90    169    159
D911V1, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RUSC2 MUTATED       11      2      6
  RUSC2 WILD-TYPE    204    153    156
D911V2, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             2             153
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RUSC2 MUTATED        7      9      1      3
  RUSC2 WILD-TYPE    128    115    124     57
D911V3, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             9             115
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RUSC2 MUTATED       16      4      0
  RUSC2 WILD-TYPE    237     98     89
D911V4, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1            16             237
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RUSC2 MUTATED        2     11      8
  RUSC2 WILD-TYPE    162    236    135
D911V5, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            11             236
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RUSC2 MUTATED        4      5      5      2      5
  RUSC2 WILD-TYPE    117     99     86    119    112
D911V6, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RUSC2 MUTATED        3     15      5
  RUSC2 WILD-TYPE    156    236    160
D911V7, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            15             236
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RUSC2 MUTATED        2      7      8      2      4
  RUSC2 WILD-TYPE    116    124    143     92     77
D911V8, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             8             143
  CLUS_4             2              92
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RUSC2 MUTATED        1      6      2      1      8
  RUSC2 WILD-TYPE    117    130    113     39     63
D911V9, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RUSC2 MUTATED        0      5      7      4      2
  RUSC2 WILD-TYPE     48    104    123     97     90
D911V10, multiclass
        clus
vv       RUSC2 MUTATED RUSC2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4             4              97
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(912) Variable = IGF2BP3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGF2BP3 MUTATED        3      1      0      4
  IGF2BP3 WILD-TYPE    132     91    172    172
D912V1, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IGF2BP3 MUTATED        9      0      0
  IGF2BP3 WILD-TYPE    206    155    162
D912V2, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               9               206
  CLUS_2               0               155
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGF2BP3 MUTATED        2      2      1      0
  IGF2BP3 WILD-TYPE    133    122    124     60
D912V3, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IGF2BP3 MUTATED        2      2      1
  IGF2BP3 WILD-TYPE    251    100     88
D912V4, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               2               251
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IGF2BP3 MUTATED        2      6      1
  IGF2BP3 WILD-TYPE    162    241    142
D912V5, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGF2BP3 MUTATED        0      2      5      1      1
  IGF2BP3 WILD-TYPE    121    102     86    120    116
D912V6, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IGF2BP3 MUTATED        0      7      2
  IGF2BP3 WILD-TYPE    159    244    163
D912V7, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               7               244
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGF2BP3 MUTATED        0      6      2      0      1
  IGF2BP3 WILD-TYPE    118    125    149     94     80
D912V8, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               125
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGF2BP3 MUTATED        0      6      1      1      1
  IGF2BP3 WILD-TYPE    118    130    114     39     70
D912V9, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               130
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGF2BP3 MUTATED        1      5      3      0      0
  IGF2BP3 WILD-TYPE     47    104    127    101     92
D912V10, multiclass
        clus
vv       IGF2BP3 MUTATED IGF2BP3 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               5               104
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(913) Variable = QRFPR MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QRFPR MUTATED        5      3      1      8
  QRFPR WILD-TYPE    130     89    171    168
D913V1, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3              89
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  QRFPR MUTATED        8      4      1
  QRFPR WILD-TYPE    207    151    161
D913V2, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             8             207
  CLUS_2             4             151
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  QRFPR MUTATED        6      5      1      1
  QRFPR WILD-TYPE    129    119    124     59
D913V3, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             6             129
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  QRFPR MUTATED        9      3      1
  QRFPR WILD-TYPE    244     99     88
D913V4, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  QRFPR MUTATED        4      9      3
  QRFPR WILD-TYPE    160    238    140
D913V5, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  QRFPR MUTATED        5      3      5      2      1
  QRFPR WILD-TYPE    116    101     86    119    116
D913V6, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             5             116
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  QRFPR MUTATED        4     12      1
  QRFPR WILD-TYPE    155    239    164
D913V7, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  QRFPR MUTATED        2      7      6      2      0
  QRFPR WILD-TYPE    116    124    145     92     81
D913V8, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  QRFPR MUTATED        2      6      1      1      3
  QRFPR WILD-TYPE    116    130    114     39     68
D913V9, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  QRFPR MUTATED        1      5      4      1      2
  QRFPR WILD-TYPE     47    104    126    100     90
D913V10, multiclass
        clus
vv       QRFPR MUTATED QRFPR WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(914) Variable = GGT6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GGT6 MUTATED        1      1      0      4
  GGT6 WILD-TYPE    134     91    172    172
D914V1, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GGT6 MUTATED        2      1      1
  GGT6 WILD-TYPE    213    154    161
D914V2, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            2            213
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GGT6 MUTATED        3      1      0      1
  GGT6 WILD-TYPE    132    123    125     59
D914V3, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GGT6 MUTATED        5      0      0
  GGT6 WILD-TYPE    248    102     89
D914V4, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GGT6 MUTATED        0      4      2
  GGT6 WILD-TYPE    164    243    141
D914V5, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GGT6 MUTATED        0      2      3      0      1
  GGT6 WILD-TYPE    121    102     88    121    116
D914V6, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GGT6 MUTATED        1      4      1
  GGT6 WILD-TYPE    158    247    164
D914V7, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GGT6 MUTATED        1      2      3      0      0
  GGT6 WILD-TYPE    117    129    148     94     81
D914V8, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GGT6 MUTATED        1      0      0      1      2
  GGT6 WILD-TYPE    117    136    115     39     69
D914V9, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            0            136
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GGT6 MUTATED        0      2      2      0      0
  GGT6 WILD-TYPE     48    107    128    101     92
D914V10, multiclass
        clus
vv       GGT6 MUTATED GGT6 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(915) Variable = SCIN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCIN MUTATED        2      0      4      8
  SCIN WILD-TYPE    133     92    168    168
D915V1, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCIN MUTATED        5      2      3
  SCIN WILD-TYPE    210    153    159
D915V2, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCIN MUTATED        4      6      3      0
  SCIN WILD-TYPE    131    118    122     60
D915V3, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            4            131
  CLUS_2            6            118
  CLUS_3            3            122
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCIN MUTATED        6      4      3
  SCIN WILD-TYPE    247     98     86
D915V4, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            6            247
  CLUS_2            4             98
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCIN MUTATED        3      7      4
  SCIN WILD-TYPE    161    240    139
D915V5, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCIN MUTATED        2      2      5      2      3
  SCIN WILD-TYPE    119    102     86    119    114
D915V6, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SCIN MUTATED        2      9      3
  SCIN WILD-TYPE    157    242    162
D915V7, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            2            157
  CLUS_2            9            242
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCIN MUTATED        2      4      5      2      1
  SCIN WILD-TYPE    116    127    146     92     80
D915V8, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCIN MUTATED        1      4      2      3      0
  SCIN WILD-TYPE    117    132    113     37     71
D915V9, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            3             37
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCIN MUTATED        1      3      3      1      2
  SCIN WILD-TYPE     47    106    127    100     90
D915V10, multiclass
        clus
vv       SCIN MUTATED SCIN WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(916) Variable = SLC6A11 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A11 MUTATED        1      2      1      9
  SLC6A11 WILD-TYPE    134     90    171    167
D916V1, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A11 MUTATED        5      0      5
  SLC6A11 WILD-TYPE    210    155    157
D916V2, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC6A11 MUTATED        4      2      2      2
  SLC6A11 WILD-TYPE    131    122    123     58
D916V3, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A11 MUTATED        8      2      0
  SLC6A11 WILD-TYPE    245    100     89
D916V4, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A11 MUTATED        2      7      3
  SLC6A11 WILD-TYPE    162    240    140
D916V5, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               7               240
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC6A11 MUTATED        3      2      3      0      4
  SLC6A11 WILD-TYPE    118    102     88    121    113
D916V6, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               2               102
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC6A11 MUTATED        3      6      4
  SLC6A11 WILD-TYPE    156    245    161
D916V7, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               6               245
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC6A11 MUTATED        3      4      6      0      0
  SLC6A11 WILD-TYPE    115    127    145     94     81
D916V8, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               4               127
  CLUS_3               6               145
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC6A11 MUTATED        1      2      1      1      4
  SLC6A11 WILD-TYPE    117    134    114     39     67
D916V9, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC6A11 MUTATED        0      3      5      1      0
  SLC6A11 WILD-TYPE     48    106    125    100     92
D916V10, multiclass
        clus
vv       SLC6A11 MUTATED SLC6A11 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               5               125
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(917) Variable = SMCHD1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMCHD1 MUTATED        2      4      3      8
  SMCHD1 WILD-TYPE    133     88    169    168
D917V1, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SMCHD1 MUTATED        8      4      2
  SMCHD1 WILD-TYPE    207    151    160
D917V2, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              4              151
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMCHD1 MUTATED        5      6      1      1
  SMCHD1 WILD-TYPE    130    118    124     59
D917V3, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SMCHD1 MUTATED       10      3      0
  SMCHD1 WILD-TYPE    243     99     89
D917V4, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SMCHD1 MUTATED        4      9      3
  SMCHD1 WILD-TYPE    160    238    140
D917V5, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              9              238
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMCHD1 MUTATED        1      5      6      2      2
  SMCHD1 WILD-TYPE    120     99     85    119    115
D917V6, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              6               85
  CLUS_4              2              119
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SMCHD1 MUTATED        4     12      1
  SMCHD1 WILD-TYPE    155    239    164
D917V7, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             12              239
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMCHD1 MUTATED        2      7      6      2      0
  SMCHD1 WILD-TYPE    116    124    145     92     81
D917V8, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              124
  CLUS_3              6              145
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMCHD1 MUTATED        3      2      1      3      1
  SMCHD1 WILD-TYPE    115    134    114     37     70
D917V9, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              3               37
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMCHD1 MUTATED        2      3      2      1      2
  SMCHD1 WILD-TYPE     46    106    128    100     90
D917V10, multiclass
        clus
vv       SMCHD1 MUTATED SMCHD1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(918) Variable = PGCP MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PGCP MUTATED        3      2      2      3
  PGCP WILD-TYPE    132     90    170    173
D918V1, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGCP MUTATED        7      0      3
  PGCP WILD-TYPE    208    155    159
D918V2, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PGCP MUTATED        0      1      3      3
  PGCP WILD-TYPE    135    123    122     57
D918V3, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1            123
  CLUS_3            3            122
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGCP MUTATED        3      3      1
  PGCP WILD-TYPE    250     99     88
D918V4, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            3            250
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGCP MUTATED        0      5      3
  PGCP WILD-TYPE    164    242    140
D918V5, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            0            164
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGCP MUTATED        1      3      0      0      4
  PGCP WILD-TYPE    120    101     91    121    113
D918V6, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            0             91
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PGCP MUTATED        0      4      6
  PGCP WILD-TYPE    159    247    159
D918V7, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            0            159
  CLUS_2            4            247
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGCP MUTATED        3      4      3      0      0
  PGCP WILD-TYPE    115    127    148     94     81
D918V8, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            3            115
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGCP MUTATED        0      1      3      3      2
  PGCP WILD-TYPE    118    135    112     37     69
D918V9, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            3            112
  CLUS_4            3             37
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PGCP MUTATED        0      1      5      3      0
  PGCP WILD-TYPE     48    108    125     98     92
D918V10, multiclass
        clus
vv       PGCP MUTATED PGCP WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            5            125
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(919) Variable = TBL1XR1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBL1XR1 MUTATED        0      1      0      9
  TBL1XR1 WILD-TYPE    135     91    172    167
D919V1, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBL1XR1 MUTATED        7      1      0
  TBL1XR1 WILD-TYPE    208    154    162
D919V2, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBL1XR1 MUTATED        4      0      2      1
  TBL1XR1 WILD-TYPE    131    124    123     59
D919V3, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               0               124
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBL1XR1 MUTATED        5      0      2
  TBL1XR1 WILD-TYPE    248    102     87
D919V4, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBL1XR1 MUTATED        2      5      4
  TBL1XR1 WILD-TYPE    162    242    139
D919V5, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               5               242
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBL1XR1 MUTATED        0      2      6      1      2
  TBL1XR1 WILD-TYPE    121    102     85    120    115
D919V6, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TBL1XR1 MUTATED        1      8      2
  TBL1XR1 WILD-TYPE    158    243    163
D919V7, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               8               243
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBL1XR1 MUTATED        0      5      4      1      1
  TBL1XR1 WILD-TYPE    118    126    147     93     80
D919V8, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               126
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBL1XR1 MUTATED        0      4      0      1      2
  TBL1XR1 WILD-TYPE    118    132    115     39     69
D919V9, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBL1XR1 MUTATED        1      4      2      0      0
  TBL1XR1 WILD-TYPE     47    105    128    101     92
D919V10, multiclass
        clus
vv       TBL1XR1 MUTATED TBL1XR1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               2               128
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(920) Variable = TMEM127 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM127 MUTATED        0      1      0      5
  TMEM127 WILD-TYPE    135     91    172    171
D920V1, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM127 MUTATED        4      1      1
  TMEM127 WILD-TYPE    211    154    161
D920V2, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM127 MUTATED        2      2      0      0
  TMEM127 WILD-TYPE    133    122    125     60
D920V3, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM127 MUTATED        4      0      0
  TMEM127 WILD-TYPE    249    102     89
D920V4, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM127 MUTATED        1      4      1
  TMEM127 WILD-TYPE    163    243    142
D920V5, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM127 MUTATED        1      1      2      1      1
  TMEM127 WILD-TYPE    120    103     89    120    116
D920V6, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM127 MUTATED        2      4      0
  TMEM127 WILD-TYPE    157    247    165
D920V7, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               4               247
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM127 MUTATED        0      1      4      1      0
  TMEM127 WILD-TYPE    118    130    147     93     81
D920V8, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               130
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM127 MUTATED        2      1      0      0      2
  TMEM127 WILD-TYPE    116    135    115     40     69
D920V9, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               135
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM127 MUTATED        0      1      3      0      1
  TMEM127 WILD-TYPE     48    108    127    101     91
D920V10, multiclass
        clus
vv       TMEM127 MUTATED TMEM127 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(921) Variable = APITD1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  APITD1 MUTATED        1      2      0      3
  APITD1 WILD-TYPE    134     90    172    173
D921V1, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  APITD1 MUTATED        3      1      1
  APITD1 WILD-TYPE    212    154    161
D921V2, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  APITD1 MUTATED        2      2      1      1
  APITD1 WILD-TYPE    133    122    124     59
D921V3, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  APITD1 MUTATED        2      2      2
  APITD1 WILD-TYPE    251    100     87
D921V4, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  APITD1 MUTATED        1      3      2
  APITD1 WILD-TYPE    163    244    141
D921V5, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APITD1 MUTATED        0      0      3      1      2
  APITD1 WILD-TYPE    121    104     88    120    115
D921V6, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  APITD1 MUTATED        2      3      1
  APITD1 WILD-TYPE    157    248    164
D921V7, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              3              248
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APITD1 MUTATED        1      2      0      1      2
  APITD1 WILD-TYPE    117    129    151     93     79
D921V8, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              0              151
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APITD1 MUTATED        1      2      1      0      1
  APITD1 WILD-TYPE    117    134    114     40     70
D921V9, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APITD1 MUTATED        0      1      2      1      1
  APITD1 WILD-TYPE     48    108    128    100     91
D921V10, multiclass
        clus
vv       APITD1 MUTATED APITD1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(922) Variable = UGT2A3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGT2A3 MUTATED        0      1      1      6
  UGT2A3 WILD-TYPE    135     91    171    170
D922V1, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT2A3 MUTATED        3      1      1
  UGT2A3 WILD-TYPE    212    154    161
D922V2, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGT2A3 MUTATED        2      2      2      1
  UGT2A3 WILD-TYPE    133    122    123     59
D922V3, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT2A3 MUTATED        5      0      2
  UGT2A3 WILD-TYPE    248    102     87
D922V4, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              0              102
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT2A3 MUTATED        2      3      2
  UGT2A3 WILD-TYPE    162    244    141
D922V5, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              3              244
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT2A3 MUTATED        0      2      2      1      2
  UGT2A3 WILD-TYPE    121    102     89    120    115
D922V6, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  UGT2A3 MUTATED        2      4      2
  UGT2A3 WILD-TYPE    157    247    163
D922V7, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              4              247
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT2A3 MUTATED        1      3      3      1      0
  UGT2A3 WILD-TYPE    117    128    148     93     81
D922V8, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT2A3 MUTATED        1      3      0      0      1
  UGT2A3 WILD-TYPE    117    133    115     40     70
D922V9, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGT2A3 MUTATED        0      3      1      0      1
  UGT2A3 WILD-TYPE     48    106    129    101     91
D922V10, multiclass
        clus
vv       UGT2A3 MUTATED UGT2A3 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(923) Variable = ATP8B1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP8B1 MUTATED        5      2      5      9
  ATP8B1 WILD-TYPE    130     90    167    167
D923V1, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              2               90
  CLUS_3              5              167
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP8B1 MUTATED       11      5      0
  ATP8B1 WILD-TYPE    204    150    162
D923V2, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1             11              204
  CLUS_2              5              150
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP8B1 MUTATED       11      6      1      1
  ATP8B1 WILD-TYPE    124    118    124     59
D923V3, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1             11              124
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP8B1 MUTATED       13      6      0
  ATP8B1 WILD-TYPE    240     96     89
D923V4, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              6               96
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP8B1 MUTATED        6     12      3
  ATP8B1 WILD-TYPE    158    235    140
D923V5, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             12              235
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP8B1 MUTATED        3      4      8      3      3
  ATP8B1 WILD-TYPE    118    100     83    118    114
D923V6, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              4              100
  CLUS_3              8               83
  CLUS_4              3              118
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP8B1 MUTATED        4     16      1
  ATP8B1 WILD-TYPE    155    235    164
D923V7, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             16              235
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP8B1 MUTATED        2     11      6      2      0
  ATP8B1 WILD-TYPE    116    120    145     92     81
D923V8, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             11              120
  CLUS_3              6              145
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP8B1 MUTATED        3      7      0      3      4
  ATP8B1 WILD-TYPE    115    129    115     37     67
D923V9, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              129
  CLUS_3              0              115
  CLUS_4              3               37
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP8B1 MUTATED        2      9      2      2      2
  ATP8B1 WILD-TYPE     46    100    128     99     90
D923V10, multiclass
        clus
vv       ATP8B1 MUTATED ATP8B1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              9              100
  CLUS_3              2              128
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(924) Variable = HIVEP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIVEP1 MUTATED        4      2      7     17
  HIVEP1 WILD-TYPE    131     90    165    159
D924V1, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2               90
  CLUS_3              7              165
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP1 MUTATED       20      5      3
  HIVEP1 WILD-TYPE    195    150    159
D924V2, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1             20              195
  CLUS_2              5              150
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIVEP1 MUTATED        8     12      3      3
  HIVEP1 WILD-TYPE    127    112    122     57
D924V3, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              8              127
  CLUS_2             12              112
  CLUS_3              3              122
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP1 MUTATED       13     10      3
  HIVEP1 WILD-TYPE    240     92     86
D924V4, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1             13              240
  CLUS_2             10               92
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP1 MUTATED        6     17      6
  HIVEP1 WILD-TYPE    158    230    137
D924V5, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             17              230
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP1 MUTATED        3      7     13      4      2
  HIVEP1 WILD-TYPE    118     97     78    117    115
D924V6, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              7               97
  CLUS_3             13               78
  CLUS_4              4              117
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP1 MUTATED        6     20      4
  HIVEP1 WILD-TYPE    153    231    161
D924V7, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              6              153
  CLUS_2             20              231
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP1 MUTATED        0     15      9      3      3
  HIVEP1 WILD-TYPE    118    116    142     91     78
D924V8, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2             15              116
  CLUS_3              9              142
  CLUS_4              3               91
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP1 MUTATED        4      9      3      2      7
  HIVEP1 WILD-TYPE    114    127    112     38     64
D924V9, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              9              127
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              7               64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP1 MUTATED        1     10     10      1      3
  HIVEP1 WILD-TYPE     47     99    120    100     89
D924V10, multiclass
        clus
vv       HIVEP1 MUTATED HIVEP1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2             10               99
  CLUS_3             10              120
  CLUS_4              1              100
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(925) Variable = RINT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RINT1 MUTATED        1      2      3      4
  RINT1 WILD-TYPE    134     90    169    172
D925V1, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RINT1 MUTATED        7      2      1
  RINT1 WILD-TYPE    208    153    161
D925V2, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RINT1 MUTATED        4      2      2      1
  RINT1 WILD-TYPE    131    122    123     59
D925V3, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RINT1 MUTATED        6      2      1
  RINT1 WILD-TYPE    247    100     88
D925V4, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RINT1 MUTATED        3      5      2
  RINT1 WILD-TYPE    161    242    141
D925V5, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RINT1 MUTATED        1      2      5      2      0
  RINT1 WILD-TYPE    120    102     86    119    117
D925V6, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RINT1 MUTATED        3      7      0
  RINT1 WILD-TYPE    156    244    165
D925V7, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             7             244
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RINT1 MUTATED        0      5      3      2      0
  RINT1 WILD-TYPE    118    126    148     92     81
D925V8, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RINT1 MUTATED        2      1      0      2      4
  RINT1 WILD-TYPE    116    135    115     38     67
D925V9, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RINT1 MUTATED        1      3      3      0      2
  RINT1 WILD-TYPE     47    106    127    101     90
D925V10, multiclass
        clus
vv       RINT1 MUTATED RINT1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(926) Variable = H2AFY MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  H2AFY MUTATED        0      2      1      6
  H2AFY WILD-TYPE    135     90    171    170
D926V1, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  H2AFY MUTATED        5      3      0
  H2AFY WILD-TYPE    210    152    162
D926V2, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             5             210
  CLUS_2             3             152
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  H2AFY MUTATED        4      2      0      1
  H2AFY WILD-TYPE    131    122    125     59
D926V3, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  H2AFY MUTATED        6      1      0
  H2AFY WILD-TYPE    247    101     89
D926V4, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  H2AFY MUTATED        1      4      4
  H2AFY WILD-TYPE    163    243    139
D926V5, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  H2AFY MUTATED        1      2      3      1      2
  H2AFY WILD-TYPE    120    102     88    120    115
D926V6, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  H2AFY MUTATED        2      6      1
  H2AFY WILD-TYPE    157    245    164
D926V7, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             2             157
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  H2AFY MUTATED        1      1      5      1      1
  H2AFY WILD-TYPE    117    130    146     93     80
D926V8, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             130
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  H2AFY MUTATED        2      2      1      0      3
  H2AFY WILD-TYPE    116    134    114     40     68
D926V9, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  H2AFY MUTATED        1      2      3      1      1
  H2AFY WILD-TYPE     47    107    127    100     91
D926V10, multiclass
        clus
vv       H2AFY MUTATED H2AFY WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(927) Variable = TAF1L MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF1L MUTATED        7      6      7     18
  TAF1L WILD-TYPE    128     86    165    158
D927V1, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             7             128
  CLUS_2             6              86
  CLUS_3             7             165
  CLUS_4            18             158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1L MUTATED       24      5      5
  TAF1L WILD-TYPE    191    150    157
D927V2, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1            24             191
  CLUS_2             5             150
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF1L MUTATED       11      9      4      6
  TAF1L WILD-TYPE    124    115    121     54
D927V3, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1            11             124
  CLUS_2             9             115
  CLUS_3             4             121
  CLUS_4             6              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1L MUTATED       18      9      3
  TAF1L WILD-TYPE    235     93     86
D927V4, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1            18             235
  CLUS_2             9              93
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1L MUTATED        6     24      8
  TAF1L WILD-TYPE    158    223    135
D927V5, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             6             158
  CLUS_2            24             223
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1L MUTATED        5     12      9      4      8
  TAF1L WILD-TYPE    116     92     82    117    109
D927V6, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             5             116
  CLUS_2            12              92
  CLUS_3             9              82
  CLUS_4             4             117
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TAF1L MUTATED        6     23      9
  TAF1L WILD-TYPE    153    228    156
D927V7, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             6             153
  CLUS_2            23             228
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1L MUTATED        7     15     12      2      2
  TAF1L WILD-TYPE    111    116    139     92     79
D927V8, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             7             111
  CLUS_2            15             116
  CLUS_3            12             139
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1L MUTATED        4     13      6      3      5
  TAF1L WILD-TYPE    114    123    109     37     66
D927V9, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             4             114
  CLUS_2            13             123
  CLUS_3             6             109
  CLUS_4             3              37
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF1L MUTATED        3     11     12      3      2
  TAF1L WILD-TYPE     45     98    118     98     90
D927V10, multiclass
        clus
vv       TAF1L MUTATED TAF1L WILD-TYPE
  CLUS_1             3              45
  CLUS_2            11              98
  CLUS_3            12             118
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(928) Variable = C1ORF177 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF177 MUTATED        0      0      1     11
  C1ORF177 WILD-TYPE    135     92    171    165
D928V1, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4               11                165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF177 MUTATED        7      0      4
  C1ORF177 WILD-TYPE    208    155    158
D928V2, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                7                208
  CLUS_2                0                155
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1ORF177 MUTATED        2      5      3      0
  C1ORF177 WILD-TYPE    133    119    122     60
D928V3, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                5                119
  CLUS_3                3                122
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF177 MUTATED        4      2      4
  C1ORF177 WILD-TYPE    249    100     85
D928V4, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                2                100
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF177 MUTATED        1      7      4
  C1ORF177 WILD-TYPE    163    240    139
D928V5, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                7                240
  CLUS_3                4                139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF177 MUTATED        1      2      6      0      3
  C1ORF177 WILD-TYPE    120    102     85    121    114
D928V6, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                6                 85
  CLUS_4                0                121
  CLUS_5                3                114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  C1ORF177 MUTATED        0     10      2
  C1ORF177 WILD-TYPE    159    241    163
D928V7, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                0                159
  CLUS_2               10                241
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF177 MUTATED        0      3      7      0      2
  C1ORF177 WILD-TYPE    118    128    144     94     79
D928V8, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                128
  CLUS_3                7                144
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF177 MUTATED        0      4      1      1      3
  C1ORF177 WILD-TYPE    118    132    114     39     68
D928V9, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                132
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1ORF177 MUTATED        0      3      6      0      0
  C1ORF177 WILD-TYPE     48    106    124    101     92
D928V10, multiclass
        clus
vv       C1ORF177 MUTATED C1ORF177 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                6                124
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(929) Variable = DGKD MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DGKD MUTATED        0      2      1      5
  DGKD WILD-TYPE    135     90    171    171
D929V1, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DGKD MUTATED        5      0      2
  DGKD WILD-TYPE    210    155    160
D929V2, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DGKD MUTATED        2      3      1      1
  DGKD WILD-TYPE    133    121    124     59
D929V3, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DGKD MUTATED        5      2      0
  DGKD WILD-TYPE    248    100     89
D929V4, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DGKD MUTATED        3      3      2
  DGKD WILD-TYPE    161    244    141
D929V5, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            3            161
  CLUS_2            3            244
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGKD MUTATED        2      0      3      1      2
  DGKD WILD-TYPE    119    104     88    120    115
D929V6, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DGKD MUTATED        2      3      3
  DGKD WILD-TYPE    157    248    162
D929V7, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            2            157
  CLUS_2            3            248
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGKD MUTATED        1      4      1      1      1
  DGKD WILD-TYPE    117    127    150     93     80
D929V8, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            1            150
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGKD MUTATED        1      3      3      0      0
  DGKD WILD-TYPE    117    133    112     40     71
D929V9, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGKD MUTATED        1      3      0      2      1
  DGKD WILD-TYPE     47    106    130     99     91
D929V10, multiclass
        clus
vv       DGKD MUTATED DGKD WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            0            130
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(930) Variable = TNFRSF25 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF25 MUTATED        0      0      4      4
  TNFRSF25 WILD-TYPE    135     92    168    172
D930V1, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                4                168
  CLUS_4                4                172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNFRSF25 MUTATED        5      2      1
  TNFRSF25 WILD-TYPE    210    153    161
D930V2, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                2                153
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TNFRSF25 MUTATED        2      3      0      1
  TNFRSF25 WILD-TYPE    133    121    125     59
D930V3, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNFRSF25 MUTATED        5      1      0
  TNFRSF25 WILD-TYPE    248    101     89
D930V4, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                1                101
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNFRSF25 MUTATED        3      3      2
  TNFRSF25 WILD-TYPE    161    244    141
D930V5, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                3                244
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF25 MUTATED        1      1      2      2      2
  TNFRSF25 WILD-TYPE    120    103     89    119    115
D930V6, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                1                103
  CLUS_3                2                 89
  CLUS_4                2                119
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TNFRSF25 MUTATED        3      3      2
  TNFRSF25 WILD-TYPE    156    248    163
D930V7, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                3                156
  CLUS_2                3                248
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF25 MUTATED        0      4      1      2      1
  TNFRSF25 WILD-TYPE    118    127    150     92     80
D930V8, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                127
  CLUS_3                1                150
  CLUS_4                2                 92
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF25 MUTATED        3      2      1      0      1
  TNFRSF25 WILD-TYPE    115    134    114     40     70
D930V9, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                2                134
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TNFRSF25 MUTATED        0      3      1      1      2
  TNFRSF25 WILD-TYPE     48    106    129    100     90
D930V10, multiclass
        clus
vv       TNFRSF25 MUTATED TNFRSF25 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                1                129
  CLUS_4                1                100
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(931) Variable = CFI MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CFI MUTATED        2      0      3      9
  CFI WILD-TYPE    133     92    169    167
D931V1, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           2           133
  CLUS_2           0            92
  CLUS_3           3           169
  CLUS_4           9           167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CFI MUTATED        7      1      2
  CFI WILD-TYPE    208    154    160
D931V2, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           7           208
  CLUS_2           1           154
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CFI MUTATED        6      4      2      1
  CFI WILD-TYPE    129    120    123     59
D931V3, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           6           129
  CLUS_2           4           120
  CLUS_3           2           123
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CFI MUTATED        9      3      1
  CFI WILD-TYPE    244     99     88
D931V4, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           9           244
  CLUS_2           3            99
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CFI MUTATED        2     10      2
  CFI WILD-TYPE    162    237    141
D931V5, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           2           162
  CLUS_2          10           237
  CLUS_3           2           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CFI MUTATED        1      4      7      1      1
  CFI WILD-TYPE    120    100     84    120    116
D931V6, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           1           120
  CLUS_2           4           100
  CLUS_3           7            84
  CLUS_4           1           120
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  CFI MUTATED        2      9      3
  CFI WILD-TYPE    157    242    162
D931V7, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           2           157
  CLUS_2           9           242
  CLUS_3           3           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CFI MUTATED        1      7      3      1      2
  CFI WILD-TYPE    117    124    148     93     79
D931V8, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           1           117
  CLUS_2           7           124
  CLUS_3           3           148
  CLUS_4           1            93
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CFI MUTATED        1      2      1      2      2
  CFI WILD-TYPE    117    134    114     38     69
D931V9, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           1           117
  CLUS_2           2           134
  CLUS_3           1           114
  CLUS_4           2            38
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CFI MUTATED        1      2      2      2      1
  CFI WILD-TYPE     47    107    128     99     91
D931V10, multiclass
        clus
vv       CFI MUTATED CFI WILD-TYPE
  CLUS_1           1            47
  CLUS_2           2           107
  CLUS_3           2           128
  CLUS_4           2            99
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(932) Variable = EMILIN3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMILIN3 MUTATED        2      1      1     11
  EMILIN3 WILD-TYPE    133     91    171    165
D932V1, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EMILIN3 MUTATED        8      0      5
  EMILIN3 WILD-TYPE    207    155    157
D932V2, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               0               155
  CLUS_3               5               157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EMILIN3 MUTATED        8      3      1      2
  EMILIN3 WILD-TYPE    127    121    124     58
D932V3, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               8               127
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EMILIN3 MUTATED       11      1      2
  EMILIN3 WILD-TYPE    242    101     87
D932V4, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1              11               242
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EMILIN3 MUTATED        3      4      5
  EMILIN3 WILD-TYPE    161    243    138
D932V5, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               4               243
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EMILIN3 MUTATED        1      0      5      1      5
  EMILIN3 WILD-TYPE    120    104     86    120    112
D932V6, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EMILIN3 MUTATED        4      8      3
  EMILIN3 WILD-TYPE    155    243    162
D932V7, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               4               155
  CLUS_2               8               243
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EMILIN3 MUTATED        3      4      5      1      2
  EMILIN3 WILD-TYPE    115    127    146     93     79
D932V8, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               4               127
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EMILIN3 MUTATED        1      4      2      1      4
  EMILIN3 WILD-TYPE    117    132    113     39     67
D932V9, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EMILIN3 MUTATED        1      2      5      3      1
  EMILIN3 WILD-TYPE     47    107    125     98     91
D932V10, multiclass
        clus
vv       EMILIN3 MUTATED EMILIN3 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               5               125
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(933) Variable = EHBP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EHBP1 MUTATED        3      2      5      9
  EHBP1 WILD-TYPE    132     90    167    167
D933V1, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             5             167
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHBP1 MUTATED       10      4      3
  EHBP1 WILD-TYPE    205    151    159
D933V2, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EHBP1 MUTATED        5      3      5      3
  EHBP1 WILD-TYPE    130    121    120     57
D933V3, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             5             120
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHBP1 MUTATED        9      5      2
  EHBP1 WILD-TYPE    244     97     87
D933V4, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHBP1 MUTATED        9      6      4
  EHBP1 WILD-TYPE    155    241    139
D933V5, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             9             155
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHBP1 MUTATED        2      4      6      3      4
  EHBP1 WILD-TYPE    119    100     85    118    113
D933V6, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EHBP1 MUTATED        3      9      6
  EHBP1 WILD-TYPE    156    242    159
D933V7, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             9             242
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHBP1 MUTATED        2      4      8      3      1
  EHBP1 WILD-TYPE    116    127    143     91     80
D933V8, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             8             143
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHBP1 MUTATED        3      3      3      2      4
  EHBP1 WILD-TYPE    115    133    112     38     67
D933V9, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EHBP1 MUTATED        0      2      7      3      3
  EHBP1 WILD-TYPE     48    107    123     98     89
D933V10, multiclass
        clus
vv       EHBP1 MUTATED EHBP1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             7             123
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(934) Variable = HIC2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIC2 MUTATED        3      0      2     14
  HIC2 WILD-TYPE    132     92    170    162
D934V1, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HIC2 MUTATED       10      1      4
  HIC2 WILD-TYPE    205    154    158
D934V2, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIC2 MUTATED        7      8      2      1
  HIC2 WILD-TYPE    128    116    123     59
D934V3, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            8            116
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HIC2 MUTATED       13      4      1
  HIC2 WILD-TYPE    240     98     88
D934V4, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HIC2 MUTATED        2      8      7
  HIC2 WILD-TYPE    162    239    136
D934V5, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIC2 MUTATED        1      3      9      0      4
  HIC2 WILD-TYPE    120    101     82    121    113
D934V6, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            9             82
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HIC2 MUTATED        1     12      5
  HIC2 WILD-TYPE    158    239    160
D934V7, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           12            239
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIC2 MUTATED        0      6     10      0      2
  HIC2 WILD-TYPE    118    125    141     94     79
D934V8, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3           10            141
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIC2 MUTATED        0      4      1      2      6
  HIC2 WILD-TYPE    118    132    114     38     65
D934V9, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            6             65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIC2 MUTATED        0      4      7      2      0
  HIC2 WILD-TYPE     48    105    123     99     92
D934V10, multiclass
        clus
vv       HIC2 MUTATED HIC2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            7            123
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(935) Variable = C9ORF86 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF86 MUTATED        1      0      1     11
  C9ORF86 WILD-TYPE    134     92    171    165
D935V1, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4              11               165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF86 MUTATED        8      1      2
  C9ORF86 WILD-TYPE    207    154    160
D935V2, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C9ORF86 MUTATED        2     10      1      0
  C9ORF86 WILD-TYPE    133    114    124     60
D935V3, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               2               133
  CLUS_2              10               114
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF86 MUTATED        7      6      0
  C9ORF86 WILD-TYPE    246     96     89
D935V4, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               6                96
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF86 MUTATED        5      6      2
  C9ORF86 WILD-TYPE    159    241    141
D935V5, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               5               159
  CLUS_2               6               241
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF86 MUTATED        1      0      9      1      2
  C9ORF86 WILD-TYPE    120    104     82    120    115
D935V6, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               9                82
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C9ORF86 MUTATED        2      8      3
  C9ORF86 WILD-TYPE    157    243    162
D935V7, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               8               243
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF86 MUTATED        1      6      5      1      0
  C9ORF86 WILD-TYPE    117    125    146     93     81
D935V8, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF86 MUTATED        0      4      2      1      4
  C9ORF86 WILD-TYPE    118    132    113     39     67
D935V9, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C9ORF86 MUTATED        0      5      5      0      1
  C9ORF86 WILD-TYPE     48    104    125    101     91
D935V10, multiclass
        clus
vv       C9ORF86 MUTATED C9ORF86 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               5               125
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(936) Variable = ABCC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCC1 MUTATED        4      1      1     11
  ABCC1 WILD-TYPE    131     91    171    165
D936V1, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC1 MUTATED       12      0      3
  ABCC1 WILD-TYPE    203    155    159
D936V2, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCC1 MUTATED        9      5      1      0
  ABCC1 WILD-TYPE    126    119    124     60
D936V3, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC1 MUTATED       14      1      0
  ABCC1 WILD-TYPE    239    101     89
D936V4, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC1 MUTATED        3      9      4
  ABCC1 WILD-TYPE    161    238    139
D936V5, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC1 MUTATED        1      2      8      2      3
  ABCC1 WILD-TYPE    120    102     83    119    114
D936V6, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC1 MUTATED        2     11      4
  ABCC1 WILD-TYPE    157    240    161
D936V7, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            11             240
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC1 MUTATED        1      8      5      0      3
  ABCC1 WILD-TYPE    117    123    146     94     78
D936V8, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC1 MUTATED        0      5      3      3      3
  ABCC1 WILD-TYPE    118    131    112     37     68
D936V9, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             3             112
  CLUS_4             3              37
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC1 MUTATED        0      6      4      4      0
  ABCC1 WILD-TYPE     48    103    126     97     92
D936V10, multiclass
        clus
vv       ABCC1 MUTATED ABCC1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             4              97
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(937) Variable = ZNF750 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF750 MUTATED        0      3      7      7
  ZNF750 WILD-TYPE    135     89    165    169
D937V1, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              3               89
  CLUS_3              7              165
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF750 MUTATED        8      7      2
  ZNF750 WILD-TYPE    207    148    160
D937V2, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              7              148
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF750 MUTATED        6      5      2      2
  ZNF750 WILD-TYPE    129    119    123     58
D937V3, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              5              119
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF750 MUTATED       13      1      1
  ZNF750 WILD-TYPE    240    101     88
D937V4, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF750 MUTATED        9      7      1
  ZNF750 WILD-TYPE    155    240    142
D937V5, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              9              155
  CLUS_2              7              240
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF750 MUTATED        0      2      4     10      1
  ZNF750 WILD-TYPE    121    102     87    111    116
D937V6, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4             10              111
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF750 MUTATED        8      8      1
  ZNF750 WILD-TYPE    151    243    164
D937V7, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              8              151
  CLUS_2              8              243
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF750 MUTATED        0      6      2      9      0
  ZNF750 WILD-TYPE    118    125    149     85     81
D937V8, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              125
  CLUS_3              2              149
  CLUS_4              9               85
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF750 MUTATED        7      5      1      2      1
  ZNF750 WILD-TYPE    111    131    114     38     70
D937V9, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              5              131
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF750 MUTATED        1      5      1      0      9
  ZNF750 WILD-TYPE     47    104    129    101     83
D937V10, multiclass
        clus
vv       ZNF750 MUTATED ZNF750 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              9               83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(938) Variable = ZNF7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF7 MUTATED        0      0      0      8
  ZNF7 WILD-TYPE    135     92    172    168
D938V1, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF7 MUTATED        5      1      1
  ZNF7 WILD-TYPE    210    154    161
D938V2, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF7 MUTATED        4      1      0      1
  ZNF7 WILD-TYPE    131    123    125     59
D938V3, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF7 MUTATED        5      1      0
  ZNF7 WILD-TYPE    248    101     89
D938V4, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF7 MUTATED        0      7      2
  ZNF7 WILD-TYPE    164    240    141
D938V5, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            7            240
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF7 MUTATED        0      3      4      0      2
  ZNF7 WILD-TYPE    121    101     87    121    115
D938V6, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF7 MUTATED        0      8      1
  ZNF7 WILD-TYPE    159    243    164
D938V7, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF7 MUTATED        0      6      3      0      0
  ZNF7 WILD-TYPE    118    125    148     94     81
D938V8, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF7 MUTATED        0      4      0      0      2
  ZNF7 WILD-TYPE    118    132    115     40     69
D938V9, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF7 MUTATED        0      4      2      0      0
  ZNF7 WILD-TYPE     48    105    128    101     92
D938V10, multiclass
        clus
vv       ZNF7 MUTATED ZNF7 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(939) Variable = TMEM64 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM64 MUTATED        1      1      2      4
  TMEM64 WILD-TYPE    134     91    170    172
D939V1, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEM64 MUTATED        4      1      2
  TMEM64 WILD-TYPE    211    154    160
D939V2, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM64 MUTATED        1      3      0      1
  TMEM64 WILD-TYPE    134    121    125     59
D939V3, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEM64 MUTATED        4      1      0
  TMEM64 WILD-TYPE    249    101     89
D939V4, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEM64 MUTATED        2      5      0
  TMEM64 WILD-TYPE    162    242    143
D939V5, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM64 MUTATED        1      4      1      1      0
  TMEM64 WILD-TYPE    120    100     90    120    117
D939V6, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              1               90
  CLUS_4              1              120
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TMEM64 MUTATED        1      5      2
  TMEM64 WILD-TYPE    158    246    163
D939V7, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM64 MUTATED        3      2      2      1      0
  TMEM64 WILD-TYPE    115    129    149     93     81
D939V8, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              2              129
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM64 MUTATED        1      3      2      0      1
  TMEM64 WILD-TYPE    117    133    113     40     70
D939V9, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM64 MUTATED        0      0      4      2      1
  TMEM64 WILD-TYPE     48    109    126     99     91
D939V10, multiclass
        clus
vv       TMEM64 MUTATED TMEM64 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              0              109
  CLUS_3              4              126
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(940) Variable = HSP90B1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSP90B1 MUTATED        1      1      2      7
  HSP90B1 WILD-TYPE    134     91    170    169
D940V1, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               2               170
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HSP90B1 MUTATED        4      2      3
  HSP90B1 WILD-TYPE    211    153    159
D940V2, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSP90B1 MUTATED        2      2      2      2
  HSP90B1 WILD-TYPE    133    122    123     58
D940V3, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HSP90B1 MUTATED        6      1      1
  HSP90B1 WILD-TYPE    247    101     88
D940V4, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HSP90B1 MUTATED        3      5      2
  HSP90B1 WILD-TYPE    161    242    141
D940V5, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               5               242
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90B1 MUTATED        2      2      2      2      2
  HSP90B1 WILD-TYPE    119    102     89    119    115
D940V6, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               2               119
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HSP90B1 MUTATED        3      6      2
  HSP90B1 WILD-TYPE    156    245    163
D940V7, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               6               245
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90B1 MUTATED        1      4      3      2      1
  HSP90B1 WILD-TYPE    117    127    148     92     80
D940V8, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               3               148
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90B1 MUTATED        1      2      2      1      1
  HSP90B1 WILD-TYPE    117    134    113     39     70
D940V9, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90B1 MUTATED        1      1      3      0      2
  HSP90B1 WILD-TYPE     47    108    127    101     90
D940V10, multiclass
        clus
vv       HSP90B1 MUTATED HSP90B1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(941) Variable = OR10J1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR10J1 MUTATED        3      3      4      4
  OR10J1 WILD-TYPE    132     89    168    172
D941V1, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3               89
  CLUS_3              4              168
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR10J1 MUTATED        7      3      3
  OR10J1 WILD-TYPE    208    152    159
D941V2, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR10J1 MUTATED        2      5      4      1
  OR10J1 WILD-TYPE    133    119    121     59
D941V3, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              4              121
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR10J1 MUTATED        5      4      3
  OR10J1 WILD-TYPE    248     98     86
D941V4, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR10J1 MUTATED        0      6      5
  OR10J1 WILD-TYPE    164    241    138
D941V5, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              6              241
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR10J1 MUTATED        2      2      2      1      4
  OR10J1 WILD-TYPE    119    102     89    120    113
D941V6, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR10J1 MUTATED        3      7      3
  OR10J1 WILD-TYPE    156    244    162
D941V7, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              7              244
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR10J1 MUTATED        4      2      5      1      1
  OR10J1 WILD-TYPE    114    129    146     93     80
D941V8, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              2              129
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR10J1 MUTATED        3      4      3      0      2
  OR10J1 WILD-TYPE    115    132    112     40     69
D941V9, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR10J1 MUTATED        1      3      4      3      1
  OR10J1 WILD-TYPE     47    106    126     98     91
D941V10, multiclass
        clus
vv       OR10J1 MUTATED OR10J1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              3               98
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(942) Variable = CPSF2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPSF2 MUTATED        1      1      3      5
  CPSF2 WILD-TYPE    134     91    169    171
D942V1, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPSF2 MUTATED        4      3      1
  CPSF2 WILD-TYPE    211    152    161
D942V2, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CPSF2 MUTATED        4      1      2      1
  CPSF2 WILD-TYPE    131    123    123     59
D942V3, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPSF2 MUTATED        6      0      2
  CPSF2 WILD-TYPE    247    102     87
D942V4, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPSF2 MUTATED        3      3      4
  CPSF2 WILD-TYPE    161    244    139
D942V5, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             3             244
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CPSF2 MUTATED        3      0      3      2      2
  CPSF2 WILD-TYPE    118    104     88    119    115
D942V6, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CPSF2 MUTATED        3      3      4
  CPSF2 WILD-TYPE    156    248    161
D942V7, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             3             248
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CPSF2 MUTATED        2      2      2      1      3
  CPSF2 WILD-TYPE    116    129    149     93     78
D942V8, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CPSF2 MUTATED        1      2      3      0      2
  CPSF2 WILD-TYPE    117    134    112     40     69
D942V9, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CPSF2 MUTATED        1      1      2      3      1
  CPSF2 WILD-TYPE     47    108    128     98     91
D942V10, multiclass
        clus
vv       CPSF2 MUTATED CPSF2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(943) Variable = ZBTB40 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB40 MUTATED        0      2      3      8
  ZBTB40 WILD-TYPE    135     90    169    168
D943V1, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2               90
  CLUS_3              3              169
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB40 MUTATED        9      2      1
  ZBTB40 WILD-TYPE    206    153    161
D943V2, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB40 MUTATED        5      5      1      0
  ZBTB40 WILD-TYPE    130    119    124     60
D943V3, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB40 MUTATED        5      5      1
  ZBTB40 WILD-TYPE    248     97     88
D943V4, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB40 MUTATED        3      6      2
  ZBTB40 WILD-TYPE    161    241    141
D943V5, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB40 MUTATED        1      2      3      3      2
  ZBTB40 WILD-TYPE    120    102     88    118    115
D943V6, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB40 MUTATED        3      8      2
  ZBTB40 WILD-TYPE    156    243    163
D943V7, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              8              243
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB40 MUTATED        0      3      7      2      1
  ZBTB40 WILD-TYPE    118    128    144     92     80
D943V8, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              7              144
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB40 MUTATED        3      3      2      1      2
  ZBTB40 WILD-TYPE    115    133    113     39     69
D943V9, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB40 MUTATED        0      1      7      1      2
  ZBTB40 WILD-TYPE     48    108    123    100     90
D943V10, multiclass
        clus
vv       ZBTB40 MUTATED ZBTB40 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              7              123
  CLUS_4              1              100
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(944) Variable = RPS6KA6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPS6KA6 MUTATED        2      5      3     12
  RPS6KA6 WILD-TYPE    133     87    169    164
D944V1, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               5                87
  CLUS_3               3               169
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA6 MUTATED       11      2      7
  RPS6KA6 WILD-TYPE    204    153    155
D944V2, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               2               153
  CLUS_3               7               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPS6KA6 MUTATED        9      3      2      3
  RPS6KA6 WILD-TYPE    126    121    123     57
D944V3, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               3               121
  CLUS_3               2               123
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA6 MUTATED       14      3      0
  RPS6KA6 WILD-TYPE    239     99     89
D944V4, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1              14               239
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA6 MUTATED        4     11      5
  RPS6KA6 WILD-TYPE    160    236    138
D944V5, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               4               160
  CLUS_2              11               236
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA6 MUTATED        3      3      6      2      6
  RPS6KA6 WILD-TYPE    118    101     85    119    111
D944V6, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               3               101
  CLUS_3               6                85
  CLUS_4               2               119
  CLUS_5               6               111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA6 MUTATED        4      8     10
  RPS6KA6 WILD-TYPE    155    243    155
D944V7, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               4               155
  CLUS_2               8               243
  CLUS_3              10               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA6 MUTATED        2      5      9      1      5
  RPS6KA6 WILD-TYPE    116    126    142     93     76
D944V8, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               9               142
  CLUS_4               1                93
  CLUS_5               5                76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA6 MUTATED        3      4      5      1      5
  RPS6KA6 WILD-TYPE    115    132    110     39     66
D944V9, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               4               132
  CLUS_3               5               110
  CLUS_4               1                39
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA6 MUTATED        0      4      8      5      1
  RPS6KA6 WILD-TYPE     48    105    122     96     91
D944V10, multiclass
        clus
vv       RPS6KA6 MUTATED RPS6KA6 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               8               122
  CLUS_4               5                96
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(945) Variable = ICAM3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ICAM3 MUTATED        2      1      1      2
  ICAM3 WILD-TYPE    133     91    171    174
D945V1, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM3 MUTATED        3      0      0
  ICAM3 WILD-TYPE    212    155    162
D945V2, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ICAM3 MUTATED        2      0      2      2
  ICAM3 WILD-TYPE    133    124    123     58
D945V3, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0             124
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM3 MUTATED        4      0      2
  ICAM3 WILD-TYPE    249    102     87
D945V4, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM3 MUTATED        2      3      1
  ICAM3 WILD-TYPE    162    244    142
D945V5, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM3 MUTATED        2      1      1      1      1
  ICAM3 WILD-TYPE    119    103     90    120    116
D945V6, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             1              90
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ICAM3 MUTATED        2      2      2
  ICAM3 WILD-TYPE    157    249    163
D945V7, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             2             249
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM3 MUTATED        2      1      3      0      0
  ICAM3 WILD-TYPE    116    130    148     94     81
D945V8, multiclass
        clus
vv       ICAM3 MUTATED ICAM3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             1             130
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM3 MUTATED        1      0      1      0      0
  ICAM3 WILD-TYPE    117    136    114     40     71
D945V9, multiclass
[1] "Remove cluster labels:" "ICAM3 MUTATED"         
clus
  ICAM3 MUTATED ICAM3 WILD-TYPE 
              2             478 
     TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI      TCGA-2H-A9GJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM      TCGA-2H-A9GN 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR      TCGA-B7-5816 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ      TCGA-B7-A5TK 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453      TCGA-BR-6454 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457      TCGA-BR-6458 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565      TCGA-BR-6566 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707      TCGA-BR-6709 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802      TCGA-BR-6803 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715      TCGA-BR-7717 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078      TCGA-BR-8080 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-FP-A9TM      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-8604      TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4GC      TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4GJ      TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4GX      TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A6QS      TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-KB-A6F5      TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4OR      TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4OW      TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A88V      TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A891      TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NG      TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NK      TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NQ      TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NU      TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L7-A6VZ      TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A49N      TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A49S      TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A5U7      TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-MX-A663      TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-R5-A7O7 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ICAM3 MUTATED        1      0      1      0      0
  ICAM3 WILD-TYPE     47    109    129    101     92
D945V10, multiclass
[1] "Remove cluster labels:" "ICAM3 MUTATED"         
clus
  ICAM3 MUTATED ICAM3 WILD-TYPE 
              2             478 
     TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI      TCGA-2H-A9GJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM      TCGA-2H-A9GN 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR      TCGA-B7-5816 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ      TCGA-B7-A5TK 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453      TCGA-BR-6454 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457      TCGA-BR-6458 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565      TCGA-BR-6566 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707      TCGA-BR-6709 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802      TCGA-BR-6803 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715      TCGA-BR-7717 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078      TCGA-BR-8080 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8286      TCGA-BR-8289      TCGA-BR-8291 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360      TCGA-BR-8361 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365      TCGA-BR-8368 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485      TCGA-BR-8486 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590      TCGA-BR-8591 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682      TCGA-BR-8683 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A452 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI      TCGA-BR-A4QL 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-FP-A9TM      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-8604      TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4GC      TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4GJ      TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4GX      TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A6QS      TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-KB-A6F5      TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4OR      TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A4OW      TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A88V      TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A891      TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NG      TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NK      TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NQ      TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L5-A8NU      TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-L7-A6VZ      TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A49N      TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A49S      TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A5U7      TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-MX-A663      TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-R5-A7O7 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"ICAM3 WILD-TYPE" "ICAM3 WILD-TYPE" 

Clustering(946) Variable = PAX4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAX4 MUTATED        3      0      4      7
  PAX4 WILD-TYPE    132     92    168    169
D946V1, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX4 MUTATED       10      2      1
  PAX4 WILD-TYPE    205    153    161
D946V2, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAX4 MUTATED        5      5      3      0
  PAX4 WILD-TYPE    130    119    122     60
D946V3, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            5            119
  CLUS_3            3            122
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX4 MUTATED        9      1      3
  PAX4 WILD-TYPE    244    101     86
D946V4, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            1            101
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX4 MUTATED        3      9      2
  PAX4 WILD-TYPE    161    238    141
D946V5, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            9            238
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX4 MUTATED        1      3      5      4      1
  PAX4 WILD-TYPE    120    101     86    117    116
D946V6, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            4            117
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PAX4 MUTATED        3      7      4
  PAX4 WILD-TYPE    156    244    161
D946V7, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            7            244
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX4 MUTATED        1      7      3      2      1
  PAX4 WILD-TYPE    117    124    148     92     80
D946V8, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            7            124
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX4 MUTATED        3      5      3      0      0
  PAX4 WILD-TYPE    115    131    112     40     71
D946V9, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            131
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAX4 MUTATED        1      3      4      1      2
  PAX4 WILD-TYPE     47    106    126    100     90
D946V10, multiclass
        clus
vv       PAX4 MUTATED PAX4 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(947) Variable = ZNF514 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF514 MUTATED        2      0      1      6
  ZNF514 WILD-TYPE    133     92    171    170
D947V1, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF514 MUTATED        4      0      1
  ZNF514 WILD-TYPE    211    155    161
D947V2, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF514 MUTATED        3      4      1      1
  ZNF514 WILD-TYPE    132    120    124     59
D947V3, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF514 MUTATED        7      1      1
  ZNF514 WILD-TYPE    246    101     88
D947V4, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF514 MUTATED        1      4      3
  ZNF514 WILD-TYPE    163    243    140
D947V5, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              4              243
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF514 MUTATED        1      2      3      0      2
  ZNF514 WILD-TYPE    120    102     88    121    115
D947V6, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF514 MUTATED        0      7      2
  ZNF514 WILD-TYPE    159    244    163
D947V7, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              7              244
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF514 MUTATED        0      4      4      0      1
  ZNF514 WILD-TYPE    118    127    147     94     80
D947V8, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF514 MUTATED        0      1      0      2      2
  ZNF514 WILD-TYPE    118    135    115     38     69
D947V9, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF514 MUTATED        1      1      3      0      0
  ZNF514 WILD-TYPE     47    108    127    101     92
D947V10, multiclass
        clus
vv       ZNF514 MUTATED ZNF514 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(948) Variable = MSN MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MSN MUTATED        4      2      2      8
  MSN WILD-TYPE    131     90    170    168
D948V1, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           4           131
  CLUS_2           2            90
  CLUS_3           2           170
  CLUS_4           8           168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MSN MUTATED       11      3      2
  MSN WILD-TYPE    204    152    160
D948V2, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1          11           204
  CLUS_2           3           152
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MSN MUTATED        5      5      3      1
  MSN WILD-TYPE    130    119    122     59
D948V3, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           5           130
  CLUS_2           5           119
  CLUS_3           3           122
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MSN MUTATED        9      3      2
  MSN WILD-TYPE    244     99     87
D948V4, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           9           244
  CLUS_2           3            99
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MSN MUTATED        6      7      3
  MSN WILD-TYPE    158    240    140
D948V5, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           6           158
  CLUS_2           7           240
  CLUS_3           3           140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSN MUTATED        2      2      6      4      2
  MSN WILD-TYPE    119    102     85    117    115
D948V6, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           2           119
  CLUS_2           2           102
  CLUS_3           6            85
  CLUS_4           4           117
  CLUS_5           2           115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MSN MUTATED        2     11      3
  MSN WILD-TYPE    157    240    162
D948V7, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           2           157
  CLUS_2          11           240
  CLUS_3           3           162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSN MUTATED        1      5      6      2      2
  MSN WILD-TYPE    117    126    145     92     79
D948V8, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           1           117
  CLUS_2           5           126
  CLUS_3           6           145
  CLUS_4           2            92
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSN MUTATED        1      5      2      1      4
  MSN WILD-TYPE    117    131    113     39     67
D948V9, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           1           117
  CLUS_2           5           131
  CLUS_3           2           113
  CLUS_4           1            39
  CLUS_5           4            67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSN MUTATED        2      3      5      2      1
  MSN WILD-TYPE     46    106    125     99     91
D948V10, multiclass
        clus
vv       MSN MUTATED MSN WILD-TYPE
  CLUS_1           2            46
  CLUS_2           3           106
  CLUS_3           5           125
  CLUS_4           2            99
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(949) Variable = ANKRD36 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        3      6      5      9
  ANKRD36 WILD-TYPE    132     86    167    167
D949V1, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               6                86
  CLUS_3               5               167
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED       11      3      7
  ANKRD36 WILD-TYPE    204    152    155
D949V2, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1              11               204
  CLUS_2               3               152
  CLUS_3               7               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ANKRD36 MUTATED        2     11      8      1
  ANKRD36 WILD-TYPE    133    113    117     59
D949V3, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               2               133
  CLUS_2              11               113
  CLUS_3               8               117
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED       12      6      4
  ANKRD36 WILD-TYPE    241     96     85
D949V4, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1              12               241
  CLUS_2               6                96
  CLUS_3               4                85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        8     11      2
  ANKRD36 WILD-TYPE    156    236    141
D949V5, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               8               156
  CLUS_2              11               236
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD36 MUTATED        3      4      6      5      3
  ANKRD36 WILD-TYPE    118    100     85    116    114
D949V6, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               4               100
  CLUS_3               6                85
  CLUS_4               5               116
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ANKRD36 MUTATED        9      8      6
  ANKRD36 WILD-TYPE    150    243    159
D949V7, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               9               150
  CLUS_2               8               243
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD36 MUTATED        3      9      6      4      1
  ANKRD36 WILD-TYPE    115    122    145     90     80
D949V8, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               9               122
  CLUS_3               6               145
  CLUS_4               4                90
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD36 MUTATED        5      4      5      3      3
  ANKRD36 WILD-TYPE    113    132    110     37     68
D949V9, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               5               113
  CLUS_2               4               132
  CLUS_3               5               110
  CLUS_4               3                37
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ANKRD36 MUTATED        1      7      6      2      4
  ANKRD36 WILD-TYPE     47    102    124     99     88
D949V10, multiclass
        clus
vv       ANKRD36 MUTATED ANKRD36 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               7               102
  CLUS_3               6               124
  CLUS_4               2                99
  CLUS_5               4                88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(950) Variable = SIGLEC1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SIGLEC1 MUTATED        4      5      4     15
  SIGLEC1 WILD-TYPE    131     87    168    161
D950V1, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               5                87
  CLUS_3               4               168
  CLUS_4              15               161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SIGLEC1 MUTATED       18      5      4
  SIGLEC1 WILD-TYPE    197    150    158
D950V2, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1              18               197
  CLUS_2               5               150
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SIGLEC1 MUTATED        9      6      3      2
  SIGLEC1 WILD-TYPE    126    118    122     58
D950V3, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               9               126
  CLUS_2               6               118
  CLUS_3               3               122
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SIGLEC1 MUTATED       17      1      2
  SIGLEC1 WILD-TYPE    236    101     87
D950V4, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1              17               236
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SIGLEC1 MUTATED        6     16      4
  SIGLEC1 WILD-TYPE    158    231    139
D950V5, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              16               231
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC1 MUTATED        2      6     10      5      3
  SIGLEC1 WILD-TYPE    119     98     81    116    114
D950V6, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               6                98
  CLUS_3              10                81
  CLUS_4               5               116
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SIGLEC1 MUTATED        5     18      6
  SIGLEC1 WILD-TYPE    154    233    159
D950V7, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               5               154
  CLUS_2              18               233
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC1 MUTATED        3     12      7      3      4
  SIGLEC1 WILD-TYPE    115    119    144     91     77
D950V8, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              12               119
  CLUS_3               7               144
  CLUS_4               3                91
  CLUS_5               4                77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC1 MUTATED        4     13      4      0      5
  SIGLEC1 WILD-TYPE    114    123    111     40     66
D950V9, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2              13               123
  CLUS_3               4               111
  CLUS_4               0                40
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SIGLEC1 MUTATED        1      9      8      5      3
  SIGLEC1 WILD-TYPE     47    100    122     96     89
D950V10, multiclass
        clus
vv       SIGLEC1 MUTATED SIGLEC1 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               9               100
  CLUS_3               8               122
  CLUS_4               5                96
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(951) Variable = CLGN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLGN MUTATED        0      1      0      9
  CLGN WILD-TYPE    135     91    172    167
D951V1, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLGN MUTATED        4      0      2
  CLGN WILD-TYPE    211    155    160
D951V2, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            4            211
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLGN MUTATED        3      5      0      1
  CLGN WILD-TYPE    132    119    125     59
D951V3, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            3            132
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLGN MUTATED        8      1      0
  CLGN WILD-TYPE    245    101     89
D951V4, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            8            245
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLGN MUTATED        0      4      4
  CLGN WILD-TYPE    164    243    139
D951V5, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0            164
  CLUS_2            4            243
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLGN MUTATED        0      1      4      0      3
  CLGN WILD-TYPE    121    103     87    121    114
D951V6, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CLGN MUTATED        0      7      3
  CLGN WILD-TYPE    159    244    162
D951V7, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0            159
  CLUS_2            7            244
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLGN MUTATED        0      4      5      0      1
  CLGN WILD-TYPE    118    127    146     94     80
D951V8, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLGN MUTATED        0      2      1      0      3
  CLGN WILD-TYPE    118    134    114     40     68
D951V9, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLGN MUTATED        0      3      2      1      0
  CLGN WILD-TYPE     48    106    128    100     92
D951V10, multiclass
        clus
vv       CLGN MUTATED CLGN WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(952) Variable = IL7R MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL7R MUTATED        4      2      2      9
  IL7R WILD-TYPE    131     90    170    167
D952V1, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL7R MUTATED        9      3      2
  IL7R WILD-TYPE    206    152    160
D952V2, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            9            206
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL7R MUTATED        7      7      2      0
  IL7R WILD-TYPE    128    117    123     60
D952V3, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            7            128
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL7R MUTATED        9      5      2
  IL7R WILD-TYPE    244     97     87
D952V4, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            9            244
  CLUS_2            5             97
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL7R MUTATED        5      9      2
  IL7R WILD-TYPE    159    238    141
D952V5, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            5            159
  CLUS_2            9            238
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL7R MUTATED        3      3      6      2      2
  IL7R WILD-TYPE    118    101     85    119    115
D952V6, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IL7R MUTATED        3     10      4
  IL7R WILD-TYPE    156    241    161
D952V7, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            3            156
  CLUS_2           10            241
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL7R MUTATED        3      7      5      2      0
  IL7R WILD-TYPE    115    124    146     92     81
D952V8, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            3            115
  CLUS_2            7            124
  CLUS_3            5            146
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL7R MUTATED        2      4      3      2      2
  IL7R WILD-TYPE    116    132    112     38     69
D952V9, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL7R MUTATED        1      5      4      1      2
  IL7R WILD-TYPE     47    104    126    100     90
D952V10, multiclass
        clus
vv       IL7R MUTATED IL7R WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(953) Variable = AVEN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AVEN MUTATED        3      0      0      4
  AVEN WILD-TYPE    132     92    172    172
D953V1, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AVEN MUTATED        5      0      0
  AVEN WILD-TYPE    210    155    162
D953V2, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AVEN MUTATED        3      1      0      1
  AVEN WILD-TYPE    132    123    125     59
D953V3, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AVEN MUTATED        3      2      0
  AVEN WILD-TYPE    250    100     89
D953V4, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            3            250
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AVEN MUTATED        0      6      1
  AVEN WILD-TYPE    164    241    142
D953V5, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            0            164
  CLUS_2            6            241
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AVEN MUTATED        0      0      5      0      2
  AVEN WILD-TYPE    121    104     86    121    115
D953V6, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  AVEN MUTATED        1      6      0
  AVEN WILD-TYPE    158    245    165
D953V7, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AVEN MUTATED        0      5      2      0      0
  AVEN WILD-TYPE    118    126    149     94     81
D953V8, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AVEN MUTATED        0      3      0      0      0
  AVEN WILD-TYPE    118    133    115     40     71
D953V9, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AVEN MUTATED        0      1      2      0      0
  AVEN WILD-TYPE     48    108    128    101     92
D953V10, multiclass
        clus
vv       AVEN MUTATED AVEN WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(954) Variable = CCDC37 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC37 MUTATED        1      1      2     12
  CCDC37 WILD-TYPE    134     91    170    164
D954V1, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC37 MUTATED       10      1      2
  CCDC37 WILD-TYPE    205    154    160
D954V2, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCDC37 MUTATED        7      7      0      1
  CCDC37 WILD-TYPE    128    117    125     59
D954V3, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              7              117
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC37 MUTATED       10      5      0
  CCDC37 WILD-TYPE    243     97     89
D954V4, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1             10              243
  CLUS_2              5               97
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC37 MUTATED        2      8      5
  CCDC37 WILD-TYPE    162    239    138
D954V5, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              8              239
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC37 MUTATED        2      2      8      0      3
  CCDC37 WILD-TYPE    119    102     83    121    114
D954V6, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              8               83
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CCDC37 MUTATED        1     14      2
  CCDC37 WILD-TYPE    158    237    163
D954V7, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             14              237
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC37 MUTATED        0      7      9      1      0
  CCDC37 WILD-TYPE    118    124    142     93     81
D954V8, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              124
  CLUS_3              9              142
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC37 MUTATED        1      5      0      0      5
  CCDC37 WILD-TYPE    117    131    115     40     66
D954V9, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCDC37 MUTATED        0      5      5      0      1
  CCDC37 WILD-TYPE     48    104    125    101     91
D954V10, multiclass
        clus
vv       CCDC37 MUTATED CCDC37 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(955) Variable = SPATA5L1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPATA5L1 MUTATED        1      0      1      6
  SPATA5L1 WILD-TYPE    134     92    171    170
D955V1, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SPATA5L1 MUTATED        5      1      2
  SPATA5L1 WILD-TYPE    210    154    160
D955V2, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                1                154
  CLUS_3                2                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPATA5L1 MUTATED        2      3      0      0
  SPATA5L1 WILD-TYPE    133    121    125     60
D955V3, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SPATA5L1 MUTATED        4      1      0
  SPATA5L1 WILD-TYPE    249    101     89
D955V4, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                1                101
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SPATA5L1 MUTATED        2      2      3
  SPATA5L1 WILD-TYPE    162    245    140
D955V5, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                2                245
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA5L1 MUTATED        1      0      4      0      2
  SPATA5L1 WILD-TYPE    120    104     87    121    115
D955V6, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                4                 87
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SPATA5L1 MUTATED        2      4      2
  SPATA5L1 WILD-TYPE    157    247    163
D955V7, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                4                247
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA5L1 MUTATED        1      2      3      0      2
  SPATA5L1 WILD-TYPE    117    129    148     94     79
D955V8, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                129
  CLUS_3                3                148
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA5L1 MUTATED        0      2      1      1      3
  SPATA5L1 WILD-TYPE    118    134    114     39     68
D955V9, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPATA5L1 MUTATED        2      1      2      2      0
  SPATA5L1 WILD-TYPE     46    108    128     99     92
D955V10, multiclass
        clus
vv       SPATA5L1 MUTATED SPATA5L1 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2                1                108
  CLUS_3                2                128
  CLUS_4                2                 99
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(956) Variable = SERPINB10 MUTATION ANALYSIS
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB10 MUTATED        1      1      1      7
  SERPINB10 WILD-TYPE    134     91    171    169
D956V1, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 1                 134
  CLUS_2                 1                  91
  CLUS_3                 1                 171
  CLUS_4                 7                 169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB10 MUTATED        6      2      2
  SERPINB10 WILD-TYPE    209    153    160
D956V2, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 6                 209
  CLUS_2                 2                 153
  CLUS_3                 2                 160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB10 MUTATED        3      1      1      2
  SERPINB10 WILD-TYPE    132    123    124     58
D956V3, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 3                 132
  CLUS_2                 1                 123
  CLUS_3                 1                 124
  CLUS_4                 2                  58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB10 MUTATED        5      1      1
  SERPINB10 WILD-TYPE    248    101     88
D956V4, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 5                 248
  CLUS_2                 1                 101
  CLUS_3                 1                  88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB10 MUTATED        3      4      3
  SERPINB10 WILD-TYPE    161    243    140
D956V5, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 3                 161
  CLUS_2                 4                 243
  CLUS_3                 3                 140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB10 MUTATED        1      3      4      1      1
  SERPINB10 WILD-TYPE    120    101     87    120    116
D956V6, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 1                 120
  CLUS_2                 3                 101
  CLUS_3                 4                  87
  CLUS_4                 1                 120
  CLUS_5                 1                 116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  SERPINB10 MUTATED        2      6      2
  SERPINB10 WILD-TYPE    157    245    163
D956V7, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 2                 157
  CLUS_2                 6                 245
  CLUS_3                 2                 163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB10 MUTATED        1      3      5      1      0
  SERPINB10 WILD-TYPE    117    128    146     93     81
D956V8, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 1                 117
  CLUS_2                 3                 128
  CLUS_3                 5                 146
  CLUS_4                 1                  93
  CLUS_5                 0                  81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB10 MUTATED        1      3      1      2      3
  SERPINB10 WILD-TYPE    117    133    114     38     68
D956V9, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 1                 117
  CLUS_2                 3                 133
  CLUS_3                 1                 114
  CLUS_4                 2                  38
  CLUS_5                 3                  68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB10 MUTATED        1      3      4      1      1
  SERPINB10 WILD-TYPE     47    106    126    100     91
D956V10, multiclass
        clus
vv       SERPINB10 MUTATED SERPINB10 WILD-TYPE
  CLUS_1                 1                  47
  CLUS_2                 3                 106
  CLUS_3                 4                 126
  CLUS_4                 1                 100
  CLUS_5                 1                  91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(957) Variable = PIWIL2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIWIL2 MUTATED        1      1      0     10
  PIWIL2 WILD-TYPE    134     91    172    166
D957V1, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIWIL2 MUTATED        7      0      4
  PIWIL2 WILD-TYPE    208    155    158
D957V2, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              0              155
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIWIL2 MUTATED        3      4      1      1
  PIWIL2 WILD-TYPE    132    120    124     59
D957V3, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIWIL2 MUTATED        6      2      1
  PIWIL2 WILD-TYPE    247    100     88
D957V4, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIWIL2 MUTATED        2      7      3
  PIWIL2 WILD-TYPE    162    240    140
D957V5, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIWIL2 MUTATED        2      1      5      1      3
  PIWIL2 WILD-TYPE    119    103     86    120    114
D957V6, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              1              103
  CLUS_3              5               86
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PIWIL2 MUTATED        1      8      3
  PIWIL2 WILD-TYPE    158    243    162
D957V7, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIWIL2 MUTATED        1      5      5      0      1
  PIWIL2 WILD-TYPE    117    126    146     94     80
D957V8, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIWIL2 MUTATED        1      6      2      1      1
  PIWIL2 WILD-TYPE    117    130    113     39     70
D957V9, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIWIL2 MUTATED        0      7      4      0      0
  PIWIL2 WILD-TYPE     48    102    126    101     92
D957V10, multiclass
        clus
vv       PIWIL2 MUTATED PIWIL2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              7              102
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(958) Variable = FAM46D MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM46D MUTATED        4      1      2      6
  FAM46D WILD-TYPE    131     91    170    170
D958V1, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM46D MUTATED        7      3      3
  FAM46D WILD-TYPE    208    152    159
D958V2, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              7              208
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM46D MUTATED        2      5      3      2
  FAM46D WILD-TYPE    133    119    122     58
D958V3, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM46D MUTATED        7      4      1
  FAM46D WILD-TYPE    246     98     88
D958V4, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              7              246
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM46D MUTATED        4      5      3
  FAM46D WILD-TYPE    160    242    140
D958V5, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              4              160
  CLUS_2              5              242
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM46D MUTATED        2      0      4      2      4
  FAM46D WILD-TYPE    119    104     87    119    113
D958V6, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              2              119
  CLUS_2              0              104
  CLUS_3              4               87
  CLUS_4              2              119
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM46D MUTATED        3      7      3
  FAM46D WILD-TYPE    156    244    162
D958V7, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              3              156
  CLUS_2              7              244
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM46D MUTATED        2      4      3      2      2
  FAM46D WILD-TYPE    116    127    148     92     79
D958V8, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              2               92
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM46D MUTATED        2      3      2      2      4
  FAM46D WILD-TYPE    116    133    113     38     67
D958V9, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM46D MUTATED        2      4      2      3      2
  FAM46D WILD-TYPE     46    105    128     98     90
D958V10, multiclass
        clus
vv       FAM46D MUTATED FAM46D WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              3               98
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(959) Variable = LIPH MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LIPH MUTATED        0      2      3      4
  LIPH WILD-TYPE    135     90    169    172
D959V1, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LIPH MUTATED        5      2      2
  LIPH WILD-TYPE    210    153    160
D959V2, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LIPH MUTATED        1      5      1      1
  LIPH WILD-TYPE    134    119    124     59
D959V3, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            1            134
  CLUS_2            5            119
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LIPH MUTATED        3      3      2
  LIPH WILD-TYPE    250     99     87
D959V4, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            3            250
  CLUS_2            3             99
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LIPH MUTATED        2      5      2
  LIPH WILD-TYPE    162    242    141
D959V5, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIPH MUTATED        1      3      2      1      2
  LIPH WILD-TYPE    120    101     89    120    115
D959V6, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LIPH MUTATED        2      7      0
  LIPH WILD-TYPE    157    244    165
D959V7, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            2            157
  CLUS_2            7            244
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIPH MUTATED        1      4      3      1      0
  LIPH WILD-TYPE    117    127    148     93     81
D959V8, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIPH MUTATED        1      5      0      0      3
  LIPH WILD-TYPE    117    131    115     40     68
D959V9, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIPH MUTATED        0      4      4      0      1
  LIPH WILD-TYPE     48    105    126    101     91
D959V10, multiclass
        clus
vv       LIPH MUTATED LIPH WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(960) Variable = GOLT1B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GOLT1B MUTATED        0      1      0      4
  GOLT1B WILD-TYPE    135     91    172    172
D960V1, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GOLT1B MUTATED        3      0      1
  GOLT1B WILD-TYPE    212    155    161
D960V2, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GOLT1B MUTATED        0      2      0      1
  GOLT1B WILD-TYPE    135    122    125     59
D960V3, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              0              135
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GOLT1B MUTATED        1      2      0
  GOLT1B WILD-TYPE    252    100     89
D960V4, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              1              252
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GOLT1B MUTATED        0      4      1
  GOLT1B WILD-TYPE    164    243    142
D960V5, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              0              164
  CLUS_2              4              243
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GOLT1B MUTATED        1      1      3      0      0
  GOLT1B WILD-TYPE    120    103     88    121    117
D960V6, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GOLT1B MUTATED        1      3      1
  GOLT1B WILD-TYPE    158    248    164
D960V7, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              1              158
  CLUS_2              3              248
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GOLT1B MUTATED        1      1      3      0      0
  GOLT1B WILD-TYPE    117    130    148     94     81
D960V8, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              130
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GOLT1B MUTATED        0      1      1      0      2
  GOLT1B WILD-TYPE    118    135    114     40     69
D960V9, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GOLT1B MUTATED        0      0      4      0      0
  GOLT1B WILD-TYPE     48    109    126    101     92
D960V10, multiclass
        clus
vv       GOLT1B MUTATED GOLT1B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              0              109
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(961) Variable = HMCN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HMCN1 MUTATED       22     18     22     41
  HMCN1 WILD-TYPE    113     74    150    135
D961V1, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            22             113
  CLUS_2            18              74
  CLUS_3            22             150
  CLUS_4            41             135
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HMCN1 MUTATED       58     19     19
  HMCN1 WILD-TYPE    157    136    143
D961V2, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            58             157
  CLUS_2            19             136
  CLUS_3            19             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HMCN1 MUTATED       24     27     17     14
  HMCN1 WILD-TYPE    111     97    108     46
D961V3, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            24             111
  CLUS_2            27              97
  CLUS_3            17             108
  CLUS_4            14              46
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HMCN1 MUTATED       49     19     14
  HMCN1 WILD-TYPE    204     83     75
D961V4, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            49             204
  CLUS_2            19              83
  CLUS_3            14              75
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HMCN1 MUTATED       24     55     20
  HMCN1 WILD-TYPE    140    192    123
D961V5, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            24             140
  CLUS_2            55             192
  CLUS_3            20             123
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMCN1 MUTATED       18     25     28     16     12
  HMCN1 WILD-TYPE    103     79     63    105    105
D961V6, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            18             103
  CLUS_2            25              79
  CLUS_3            28              63
  CLUS_4            16             105
  CLUS_5            12             105
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HMCN1 MUTATED       25     57     23
  HMCN1 WILD-TYPE    134    194    142
D961V7, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            25             134
  CLUS_2            57             194
  CLUS_3            23             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMCN1 MUTATED       19     34     34      9      9
  HMCN1 WILD-TYPE     99     97    117     85     72
D961V8, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            19              99
  CLUS_2            34              97
  CLUS_3            34             117
  CLUS_4             9              85
  CLUS_5             9              72
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMCN1 MUTATED       14     34     11      7     17
  HMCN1 WILD-TYPE    104    102    104     33     54
D961V9, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1            14             104
  CLUS_2            34             102
  CLUS_3            11             104
  CLUS_4             7              33
  CLUS_5            17              54
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HMCN1 MUTATED        6     29     27     12      9
  HMCN1 WILD-TYPE     42     80    103     89     83
D961V10, multiclass
        clus
vv       HMCN1 MUTATED HMCN1 WILD-TYPE
  CLUS_1             6              42
  CLUS_2            29              80
  CLUS_3            27             103
  CLUS_4            12              89
  CLUS_5             9              83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(962) Variable = SERPINB7 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB7 MUTATED        1      1      3      1
  SERPINB7 WILD-TYPE    134     91    169    175
D962V1, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                3                169
  CLUS_4                1                175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB7 MUTATED        5      0      0
  SERPINB7 WILD-TYPE    210    155    162
D962V2, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                5                210
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB7 MUTATED        3      1      2      0
  SERPINB7 WILD-TYPE    132    123    123     60
D962V3, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                1                123
  CLUS_3                2                123
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB7 MUTATED        3      1      2
  SERPINB7 WILD-TYPE    250    101     87
D962V4, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                1                101
  CLUS_3                2                 87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB7 MUTATED        0      5      0
  SERPINB7 WILD-TYPE    164    242    143
D962V5, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                5                242
  CLUS_3                0                143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB7 MUTATED        1      2      2      0      0
  SERPINB7 WILD-TYPE    120    102     89    121    117
D962V6, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                2                 89
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB7 MUTATED        1      4      1
  SERPINB7 WILD-TYPE    158    247    164
D962V7, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                4                247
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB7 MUTATED        1      2      2      0      1
  SERPINB7 WILD-TYPE    117    129    149     94     80
D962V8, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                2                129
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB7 MUTATED        1      1      1      1      1
  SERPINB7 WILD-TYPE    117    135    114     39     70
D962V9, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                1                135
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB7 MUTATED        0      3      1      1      0
  SERPINB7 WILD-TYPE     48    106    129    100     92
D962V10, multiclass
        clus
vv       SERPINB7 MUTATED SERPINB7 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                1                129
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(963) Variable = TLE1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLE1 MUTATED        0      2      2     10
  TLE1 WILD-TYPE    135     90    170    166
D963V1, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLE1 MUTATED        8      2      1
  TLE1 WILD-TYPE    207    153    161
D963V2, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TLE1 MUTATED        3      4      3      2
  TLE1 WILD-TYPE    132    120    122     58
D963V3, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4            120
  CLUS_3            3            122
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLE1 MUTATED        9      1      2
  TLE1 WILD-TYPE    244    101     87
D963V4, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLE1 MUTATED        2      8      3
  TLE1 WILD-TYPE    162    239    140
D963V5, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TLE1 MUTATED        3      1      6      1      2
  TLE1 WILD-TYPE    118    103     85    120    115
D963V6, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            1            103
  CLUS_3            6             85
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TLE1 MUTATED        4      8      2
  TLE1 WILD-TYPE    155    243    163
D963V7, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            4            155
  CLUS_2            8            243
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TLE1 MUTATED        2      6      5      1      0
  TLE1 WILD-TYPE    116    125    146     93     81
D963V8, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TLE1 MUTATED        2      3      1      0      3
  TLE1 WILD-TYPE    116    133    114     40     68
D963V9, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TLE1 MUTATED        1      3      4      0      1
  TLE1 WILD-TYPE     47    106    126    101     91
D963V10, multiclass
        clus
vv       TLE1 MUTATED TLE1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(964) Variable = BRMS1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRMS1 MUTATED        1      0      0      5
  BRMS1 WILD-TYPE    134     92    172    171
D964V1, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRMS1 MUTATED        4      1      0
  BRMS1 WILD-TYPE    211    154    162
D964V2, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRMS1 MUTATED        1      1      1      0
  BRMS1 WILD-TYPE    134    123    124     60
D964V3, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRMS1 MUTATED        1      1      1
  BRMS1 WILD-TYPE    252    101     88
D964V4, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             1             252
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRMS1 MUTATED        0      4      2
  BRMS1 WILD-TYPE    164    243    141
D964V5, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRMS1 MUTATED        0      2      3      0      1
  BRMS1 WILD-TYPE    121    102     88    121    116
D964V6, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRMS1 MUTATED        0      4      2
  BRMS1 WILD-TYPE    159    247    163
D964V7, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRMS1 MUTATED        1      2      2      0      1
  BRMS1 WILD-TYPE    117    129    149     94     80
D964V8, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRMS1 MUTATED        0      2      1      0      2
  BRMS1 WILD-TYPE    118    134    114     40     69
D964V9, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRMS1 MUTATED        0      2      2      1      0
  BRMS1 WILD-TYPE     48    107    128    100     92
D964V10, multiclass
        clus
vv       BRMS1 MUTATED BRMS1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(965) Variable = GATA3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GATA3 MUTATED        2      0      3     16
  GATA3 WILD-TYPE    133     92    169    160
D965V1, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GATA3 MUTATED       15      1      2
  GATA3 WILD-TYPE    200    154    160
D965V2, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GATA3 MUTATED        8      7      1      0
  GATA3 WILD-TYPE    127    117    124     60
D965V3, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             8             127
  CLUS_2             7             117
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GATA3 MUTATED       10      3      3
  GATA3 WILD-TYPE    243     99     86
D965V4, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1            10             243
  CLUS_2             3              99
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GATA3 MUTATED        2     13      5
  GATA3 WILD-TYPE    162    234    138
D965V5, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            13             234
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GATA3 MUTATED        2      2     11      0      5
  GATA3 WILD-TYPE    119    102     80    121    112
D965V6, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3            11              80
  CLUS_4             0             121
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GATA3 MUTATED        1     15      5
  GATA3 WILD-TYPE    158    236    160
D965V7, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            15             236
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GATA3 MUTATED        1     10      6      0      4
  GATA3 WILD-TYPE    117    121    145     94     77
D965V8, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            10             121
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GATA3 MUTATED        1      6      4      1      5
  GATA3 WILD-TYPE    117    130    111     39     66
D965V9, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GATA3 MUTATED        1      6      6      4      0
  GATA3 WILD-TYPE     47    103    124     97     92
D965V10, multiclass
        clus
vv       GATA3 MUTATED GATA3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             6             124
  CLUS_4             4              97
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(966) Variable = FAM18A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM18A MUTATED        1      1      0      2
  FAM18A WILD-TYPE    134     91    172    174
D966V1, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              2              174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM18A MUTATED        1      1      1
  FAM18A WILD-TYPE    214    154    161
D966V2, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              1              214
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM18A MUTATED        2      1      0      1
  FAM18A WILD-TYPE    133    123    125     59
D966V3, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM18A MUTATED        2      2      0
  FAM18A WILD-TYPE    251    100     89
D966V4, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              2              251
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM18A MUTATED        0      3      1
  FAM18A WILD-TYPE    164    244    142
D966V5, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM18A MUTATED        0      2      2      0      0
  FAM18A WILD-TYPE    121    102     89    121    117
D966V6, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FAM18A MUTATED        0      4      0
  FAM18A WILD-TYPE    159    247    165
D966V7, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              0              159
  CLUS_2              4              247
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM18A MUTATED        0      2      2      0      0
  FAM18A WILD-TYPE    118    129    149     94     81
D966V8, multiclass
        clus
vv       FAM18A MUTATED FAM18A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM18A MUTATED        0      2      0      0      0
  FAM18A WILD-TYPE    118    134    115     40     71
D966V9, multiclass
[1] "Remove cluster labels:" "FAM18A MUTATED"        
clus
  FAM18A MUTATED FAM18A WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8078 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8486       TCGA-BR-8487       TCGA-BR-8588       TCGA-BR-8590 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8591       TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8678       TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8683       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4J7       TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-A489       TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-A4MI       TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6527       TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6818       TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-8572       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A4YV       TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A74A       TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-F1-6177       TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-FP-7735       TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-FP-8209       TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-FP-A4BE       TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4G8       TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4GH       TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4GT       TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H4 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI       TCGA-L5-A4OM 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4ON       TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A88V       TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A891       TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NG       TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NK 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X       TCGA-LN-A49Y 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4       TCGA-LN-A4A5 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX       TCGA-LN-A7HY 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0       TCGA-LN-A8I1 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ       TCGA-LN-A9FR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ       TCGA-MX-A663 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-R5-A7O7 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI       TCGA-R5-A7ZR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R5-A804       TCGA-R5-A805       TCGA-R6-A6DN       TCGA-R6-A6DQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6       TCGA-R6-A6XG 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2       TCGA-R6-A8W5 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS       TCGA-RD-A7BW 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6       TCGA-RD-A8N9 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW       TCGA-SW-A7EA 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC       TCGA-V5-A7RE 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL       TCGA-VQ-A8DU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM18A MUTATED        0      2      0      0      0
  FAM18A WILD-TYPE     48    107    130    101     92
D966V10, multiclass
[1] "Remove cluster labels:" "FAM18A MUTATED"        
clus
  FAM18A MUTATED FAM18A WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8078 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8486       TCGA-BR-8487       TCGA-BR-8588       TCGA-BR-8590 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8591       TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8678       TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-8683       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4J7       TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-A489       TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CD-A4MI       TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6527       TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-6818       TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-8572       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A4YV       TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-D7-A74A       TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-F1-6177       TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-FP-7735       TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-FP-8209       TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-FP-A4BE       TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4G8       TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4GH       TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4GT       TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H4 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI       TCGA-L5-A4OM 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4ON       TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A88V       TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A891       TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NG       TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NK 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X       TCGA-LN-A49Y 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4       TCGA-LN-A4A5 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX       TCGA-LN-A7HY 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0       TCGA-LN-A8I1 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ       TCGA-LN-A9FR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ       TCGA-MX-A663 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-R5-A7O7 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI       TCGA-R5-A7ZR 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R5-A804       TCGA-R5-A805       TCGA-R6-A6DN       TCGA-R6-A6DQ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6       TCGA-R6-A6XG 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2       TCGA-R6-A8W5 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS       TCGA-RD-A7BW 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6       TCGA-RD-A8N9 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW       TCGA-SW-A7EA 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC       TCGA-V5-A7RE 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL       TCGA-VQ-A8DU 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"FAM18A WILD-TYPE" "FAM18A WILD-TYPE" 

Clustering(967) Variable = GPATCH2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPATCH2 MUTATED        0      2      1      7
  GPATCH2 WILD-TYPE    135     90    171    169
D967V1, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH2 MUTATED        4      2      2
  GPATCH2 WILD-TYPE    211    153    160
D967V2, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPATCH2 MUTATED        5      2      0      1
  GPATCH2 WILD-TYPE    130    122    125     59
D967V3, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH2 MUTATED        6      2      0
  GPATCH2 WILD-TYPE    247    100     89
D967V4, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH2 MUTATED        1      5      4
  GPATCH2 WILD-TYPE    163    242    139
D967V5, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               5               242
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH2 MUTATED        1      4      3      0      2
  GPATCH2 WILD-TYPE    120    100     88    121    115
D967V6, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               4               100
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH2 MUTATED        0      7      3
  GPATCH2 WILD-TYPE    159    244    162
D967V7, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               7               244
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH2 MUTATED        3      3      3      0      1
  GPATCH2 WILD-TYPE    115    128    148     94     80
D967V8, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               3               128
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH2 MUTATED        0      2      2      0      4
  GPATCH2 WILD-TYPE    118    134    113     40     67
D967V9, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH2 MUTATED        1      3      3      1      0
  GPATCH2 WILD-TYPE     47    106    127    100     92
D967V10, multiclass
        clus
vv       GPATCH2 MUTATED GPATCH2 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(968) Variable = OR6C70 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR6C70 MUTATED        1      0      0      5
  OR6C70 WILD-TYPE    134     92    172    171
D968V1, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C70 MUTATED        4      0      0
  OR6C70 WILD-TYPE    211    155    162
D968V2, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR6C70 MUTATED        3      2      1      0
  OR6C70 WILD-TYPE    132    122    124     60
D968V3, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C70 MUTATED        4      1      1
  OR6C70 WILD-TYPE    249    101     88
D968V4, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C70 MUTATED        1      3      1
  OR6C70 WILD-TYPE    163    244    142
D968V5, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C70 MUTATED        0      0      4      0      1
  OR6C70 WILD-TYPE    121    104     87    121    116
D968V6, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR6C70 MUTATED        0      5      1
  OR6C70 WILD-TYPE    159    246    164
D968V7, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C70 MUTATED        0      4      1      0      1
  OR6C70 WILD-TYPE    118    127    150     94     80
D968V8, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C70 MUTATED        0      1      0      0      3
  OR6C70 WILD-TYPE    118    135    115     40     68
D968V9, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR6C70 MUTATED        0      2      2      0      0
  OR6C70 WILD-TYPE     48    107    128    101     92
D968V10, multiclass
        clus
vv       OR6C70 MUTATED OR6C70 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(969) Variable = SPIB MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPIB MUTATED        3      1      0      5
  SPIB WILD-TYPE    132     91    172    171
D969V1, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SPIB MUTATED        5      2      1
  SPIB WILD-TYPE    210    153    161
D969V2, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPIB MUTATED        4      5      0      0
  SPIB WILD-TYPE    131    119    125     60
D969V3, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SPIB MUTATED        4      5      0
  SPIB WILD-TYPE    249     97     89
D969V4, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            4            249
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SPIB MUTATED        2      4      3
  SPIB WILD-TYPE    162    243    140
D969V5, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPIB MUTATED        1      1      4      1      2
  SPIB WILD-TYPE    120    103     87    120    115
D969V6, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SPIB MUTATED        1      6      2
  SPIB WILD-TYPE    158    245    163
D969V7, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPIB MUTATED        2      4      2      0      1
  SPIB WILD-TYPE    116    127    149     94     80
D969V8, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPIB MUTATED        0      3      2      1      1
  SPIB WILD-TYPE    118    133    113     39     70
D969V9, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPIB MUTATED        2      3      1      1      0
  SPIB WILD-TYPE     46    106    129    100     92
D969V10, multiclass
        clus
vv       SPIB MUTATED SPIB WILD-TYPE
  CLUS_1            2             46
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(970) Variable = SULF1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SULF1 MUTATED        7      3      5     16
  SULF1 WILD-TYPE    128     89    167    160
D970V1, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             3              89
  CLUS_3             5             167
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SULF1 MUTATED       20      2      6
  SULF1 WILD-TYPE    195    153    156
D970V2, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1            20             195
  CLUS_2             2             153
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SULF1 MUTATED        5      9      5      4
  SULF1 WILD-TYPE    130    115    120     56
D970V3, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             9             115
  CLUS_3             5             120
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SULF1 MUTATED        9     11      3
  SULF1 WILD-TYPE    244     91     86
D970V4, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2            11              91
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SULF1 MUTATED        2     17     10
  SULF1 WILD-TYPE    162    230    133
D970V5, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            17             230
  CLUS_3            10             133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SULF1 MUTATED        3      9      8      1      8
  SULF1 WILD-TYPE    118     95     83    120    109
D970V6, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             9              95
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SULF1 MUTATED        3     18      9
  SULF1 WILD-TYPE    156    233    156
D970V7, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            18             233
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SULF1 MUTATED        3     12     12      0      3
  SULF1 WILD-TYPE    115    119    139     94     78
D970V8, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2            12             119
  CLUS_3            12             139
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SULF1 MUTATED        1      9      6      1      8
  SULF1 WILD-TYPE    117    127    109     39     63
D970V9, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             127
  CLUS_3             6             109
  CLUS_4             1              39
  CLUS_5             8              63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SULF1 MUTATED        0     10     12      3      0
  SULF1 WILD-TYPE     48     99    118     98     92
D970V10, multiclass
        clus
vv       SULF1 MUTATED SULF1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2            10              99
  CLUS_3            12             118
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(971) Variable = LPHN2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LPHN2 MUTATED        7      7      4      8
  LPHN2 WILD-TYPE    128     85    168    168
D971V1, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             7              85
  CLUS_3             4             168
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LPHN2 MUTATED       14      5      6
  LPHN2 WILD-TYPE    201    150    156
D971V2, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             5             150
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LPHN2 MUTATED        9      3      5      3
  LPHN2 WILD-TYPE    126    121    120     57
D971V3, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             3             121
  CLUS_3             5             120
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LPHN2 MUTATED       17      1      2
  LPHN2 WILD-TYPE    236    101     87
D971V4, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1            17             236
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LPHN2 MUTATED        8     12      6
  LPHN2 WILD-TYPE    156    235    137
D971V5, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             8             156
  CLUS_2            12             235
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LPHN2 MUTATED        5      6      4      4      7
  LPHN2 WILD-TYPE    116     98     87    117    110
D971V6, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             6              98
  CLUS_3             4              87
  CLUS_4             4             117
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LPHN2 MUTATED        4     15      7
  LPHN2 WILD-TYPE    155    236    158
D971V7, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            15             236
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LPHN2 MUTATED        5      9      7      1      4
  LPHN2 WILD-TYPE    113    122    144     93     77
D971V8, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LPHN2 MUTATED        3      9      6      2      2
  LPHN2 WILD-TYPE    115    127    109     38     69
D971V9, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             9             127
  CLUS_3             6             109
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LPHN2 MUTATED        4      6      5      6      1
  LPHN2 WILD-TYPE     44    103    125     95     91
D971V10, multiclass
        clus
vv       LPHN2 MUTATED LPHN2 WILD-TYPE
  CLUS_1             4              44
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             6              95
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(972) Variable = TMEM161A MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM161A MUTATED        0      0      1      8
  TMEM161A WILD-TYPE    135     92    171    168
D972V1, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                0                135
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM161A MUTATED        5      2      0
  TMEM161A WILD-TYPE    210    153    162
D972V2, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                5                210
  CLUS_2                2                153
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM161A MUTATED        6      1      2      0
  TMEM161A WILD-TYPE    129    123    123     60
D972V3, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                6                129
  CLUS_2                1                123
  CLUS_3                2                123
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM161A MUTATED        7      1      1
  TMEM161A WILD-TYPE    246    101     88
D972V4, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                7                246
  CLUS_2                1                101
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM161A MUTATED        3      6      1
  TMEM161A WILD-TYPE    161    241    142
D972V5, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                3                161
  CLUS_2                6                241
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM161A MUTATED        1      2      5      1      1
  TMEM161A WILD-TYPE    120    102     86    120    116
D972V6, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                5                 86
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TMEM161A MUTATED        2      6      1
  TMEM161A WILD-TYPE    157    245    164
D972V7, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                2                157
  CLUS_2                6                245
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM161A MUTATED        0      6      2      1      0
  TMEM161A WILD-TYPE    118    125    149     93     81
D972V8, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                125
  CLUS_3                2                149
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM161A MUTATED        1      1      0      0      2
  TMEM161A WILD-TYPE    117    135    115     40     69
D972V9, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                1                117
  CLUS_2                1                135
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM161A MUTATED        0      2      1      0      1
  TMEM161A WILD-TYPE     48    107    129    101     91
D972V10, multiclass
        clus
vv       TMEM161A MUTATED TMEM161A WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                1                129
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(973) Variable = PLXNB1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNB1 MUTATED        6      1      5     19
  PLXNB1 WILD-TYPE    129     91    167    157
D973V1, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              1               91
  CLUS_3              5              167
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB1 MUTATED       21      5      3
  PLXNB1 WILD-TYPE    194    150    159
D973V2, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1             21              194
  CLUS_2              5              150
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLXNB1 MUTATED       11      8      3      1
  PLXNB1 WILD-TYPE    124    116    122     59
D973V3, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1             11              124
  CLUS_2              8              116
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB1 MUTATED       17      5      1
  PLXNB1 WILD-TYPE    236     97     88
D973V4, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1             17              236
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB1 MUTATED        8     17      4
  PLXNB1 WILD-TYPE    156    230    139
D973V5, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              8              156
  CLUS_2             17              230
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB1 MUTATED        5      6     12      3      3
  PLXNB1 WILD-TYPE    116     98     79    118    114
D973V6, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              5              116
  CLUS_2              6               98
  CLUS_3             12               79
  CLUS_4              3              118
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PLXNB1 MUTATED        7     22      2
  PLXNB1 WILD-TYPE    152    229    163
D973V7, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              7              152
  CLUS_2             22              229
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB1 MUTATED        5     13      8      3      2
  PLXNB1 WILD-TYPE    113    118    143     91     79
D973V8, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              5              113
  CLUS_2             13              118
  CLUS_3              8              143
  CLUS_4              3               91
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB1 MUTATED        6     11      2      3      5
  PLXNB1 WILD-TYPE    112    125    113     37     66
D973V9, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              6              112
  CLUS_2             11              125
  CLUS_3              2              113
  CLUS_4              3               37
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLXNB1 MUTATED        3     14      6      1      3
  PLXNB1 WILD-TYPE     45     95    124    100     89
D973V10, multiclass
        clus
vv       PLXNB1 MUTATED PLXNB1 WILD-TYPE
  CLUS_1              3               45
  CLUS_2             14               95
  CLUS_3              6              124
  CLUS_4              1              100
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(974) Variable = MYOCD MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYOCD MUTATED        1      1      2     14
  MYOCD WILD-TYPE    134     91    170    162
D974V1, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            14             162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYOCD MUTATED        8      2      6
  MYOCD WILD-TYPE    207    153    156
D974V2, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             8             207
  CLUS_2             2             153
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYOCD MUTATED        5      8      4      1
  MYOCD WILD-TYPE    130    116    121     59
D974V3, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             5             130
  CLUS_2             8             116
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYOCD MUTATED       11      4      3
  MYOCD WILD-TYPE    242     98     86
D974V4, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYOCD MUTATED        1      9      8
  MYOCD WILD-TYPE    163    238    135
D974V5, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             1             163
  CLUS_2             9             238
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYOCD MUTATED        1      3      5      1      8
  MYOCD WILD-TYPE    120    101     86    120    109
D974V6, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             1             120
  CLUS_5             8             109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYOCD MUTATED        2      9      7
  MYOCD WILD-TYPE    157    242    158
D974V7, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             2             157
  CLUS_2             9             242
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYOCD MUTATED        4      3      9      0      2
  MYOCD WILD-TYPE    114    128    142     94     79
D974V8, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             4             114
  CLUS_2             3             128
  CLUS_3             9             142
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYOCD MUTATED        1      4      3      0      5
  MYOCD WILD-TYPE    117    132    112     40     66
D974V9, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYOCD MUTATED        1      5      6      1      0
  MYOCD WILD-TYPE     47    104    124    100     92
D974V10, multiclass
        clus
vv       MYOCD MUTATED MYOCD WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(975) Variable = EIF4E1B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4E1B MUTATED        1      1      0      7
  EIF4E1B WILD-TYPE    134     91    172    169
D975V1, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               7               169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EIF4E1B MUTATED        5      0      1
  EIF4E1B WILD-TYPE    210    155    161
D975V2, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4E1B MUTATED        2      3      2      2
  EIF4E1B WILD-TYPE    133    121    123     58
D975V3, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3               121
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EIF4E1B MUTATED        4      3      2
  EIF4E1B WILD-TYPE    249     99     87
D975V4, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               4               249
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EIF4E1B MUTATED        1      6      2
  EIF4E1B WILD-TYPE    163    241    141
D975V5, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               1               163
  CLUS_2               6               241
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4E1B MUTATED        1      0      6      1      1
  EIF4E1B WILD-TYPE    120    104     85    120    116
D975V6, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EIF4E1B MUTATED        1      6      2
  EIF4E1B WILD-TYPE    158    245    163
D975V7, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               1               158
  CLUS_2               6               245
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4E1B MUTATED        1      4      4      0      0
  EIF4E1B WILD-TYPE    117    127    147     94     81
D975V8, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4E1B MUTATED        0      3      0      0      2
  EIF4E1B WILD-TYPE    118    133    115     40     69
D975V9, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4E1B MUTATED        0      2      3      0      0
  EIF4E1B WILD-TYPE     48    107    127    101     92
D975V10, multiclass
        clus
vv       EIF4E1B MUTATED EIF4E1B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(976) Variable = PKD2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKD2 MUTATED        1      1      6      5
  PKD2 WILD-TYPE    134     91    166    171
D976V1, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            6            166
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKD2 MUTATED        7      5      0
  PKD2 WILD-TYPE    208    150    162
D976V2, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            5            150
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PKD2 MUTATED        5      3      5      0
  PKD2 WILD-TYPE    130    121    120     60
D976V3, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3            121
  CLUS_3            5            120
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKD2 MUTATED        7      3      3
  PKD2 WILD-TYPE    246     99     86
D976V4, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            3             99
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKD2 MUTATED        7      3      3
  PKD2 WILD-TYPE    157    244    140
D976V5, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            7            157
  CLUS_2            3            244
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKD2 MUTATED        2      0      3      5      3
  PKD2 WILD-TYPE    119    104     88    116    114
D976V6, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            5            116
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PKD2 MUTATED        4      5      3
  PKD2 WILD-TYPE    155    246    162
D976V7, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            4            155
  CLUS_2            5            246
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKD2 MUTATED        0      2      4      4      2
  PKD2 WILD-TYPE    118    129    147     90     79
D976V8, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            4            147
  CLUS_4            4             90
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKD2 MUTATED        4      2      3      2      0
  PKD2 WILD-TYPE    114    134    112     38     71
D976V9, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            2            134
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PKD2 MUTATED        0      1      3      3      4
  PKD2 WILD-TYPE     48    108    127     98     88
D976V10, multiclass
        clus
vv       PKD2 MUTATED PKD2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            3             98
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(977) Variable = APOA1BP MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  APOA1BP MUTATED        2      1      0      3
  APOA1BP WILD-TYPE    133     91    172    173
D977V1, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  APOA1BP MUTATED        3      0      1
  APOA1BP WILD-TYPE    212    155    161
D977V2, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               3               212
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  APOA1BP MUTATED        0      4      1      1
  APOA1BP WILD-TYPE    135    120    124     59
D977V3, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               0               135
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  APOA1BP MUTATED        4      1      1
  APOA1BP WILD-TYPE    249    101     88
D977V4, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  APOA1BP MUTATED        1      2      3
  APOA1BP WILD-TYPE    163    245    140
D977V5, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APOA1BP MUTATED        0      0      2      1      3
  APOA1BP WILD-TYPE    121    104     89    120    114
D977V6, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  APOA1BP MUTATED        0      3      3
  APOA1BP WILD-TYPE    159    248    162
D977V7, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               0               159
  CLUS_2               3               248
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APOA1BP MUTATED        0      0      4      0      2
  APOA1BP WILD-TYPE    118    131    147     94     79
D977V8, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               0               118
  CLUS_2               0               131
  CLUS_3               4               147
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APOA1BP MUTATED        0      0      2      0      2
  APOA1BP WILD-TYPE    118    136    113     40     69
D977V9, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               0               118
  CLUS_2               0               136
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  APOA1BP MUTATED        0      0      2      2      0
  APOA1BP WILD-TYPE     48    109    128     99     92
D977V10, multiclass
        clus
vv       APOA1BP MUTATED APOA1BP WILD-TYPE
  CLUS_1               0                48
  CLUS_2               0               109
  CLUS_3               2               128
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(978) Variable = ATP2C1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP2C1 MUTATED        2      2      5     11
  ATP2C1 WILD-TYPE    133     90    167    165
D978V1, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              5              167
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2C1 MUTATED        9      4      3
  ATP2C1 WILD-TYPE    206    151    159
D978V2, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              4              151
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP2C1 MUTATED        7      6      5      1
  ATP2C1 WILD-TYPE    128    118    120     59
D978V3, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              6              118
  CLUS_3              5              120
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2C1 MUTATED       14      2      3
  ATP2C1 WILD-TYPE    239    100     86
D978V4, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1             14              239
  CLUS_2              2              100
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2C1 MUTATED        5      8      6
  ATP2C1 WILD-TYPE    159    239    137
D978V5, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              5              159
  CLUS_2              8              239
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2C1 MUTATED        4      4      5      4      2
  ATP2C1 WILD-TYPE    117    100     86    117    115
D978V6, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              4              100
  CLUS_3              5               86
  CLUS_4              4              117
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2C1 MUTATED        4     12      4
  ATP2C1 WILD-TYPE    155    239    161
D978V7, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             12              239
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2C1 MUTATED        3      5      7      5      0
  ATP2C1 WILD-TYPE    115    126    144     89     81
D978V8, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              126
  CLUS_3              7              144
  CLUS_4              5               89
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2C1 MUTATED        4      4      3      2      3
  ATP2C1 WILD-TYPE    114    132    112     38     68
D978V9, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2C1 MUTATED        1      5      5      0      5
  ATP2C1 WILD-TYPE     47    104    125    101     87
D978V10, multiclass
        clus
vv       ATP2C1 MUTATED ATP2C1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              5               87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(979) Variable = FER1L6 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FER1L6 MUTATED        4      5      5     17
  FER1L6 WILD-TYPE    131     87    167    159
D979V1, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              5               87
  CLUS_3              5              167
  CLUS_4             17              159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FER1L6 MUTATED       18      7      3
  FER1L6 WILD-TYPE    197    148    159
D979V2, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1             18              197
  CLUS_2              7              148
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FER1L6 MUTATED       12     10      3      1
  FER1L6 WILD-TYPE    123    114    122     59
D979V3, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1             12              123
  CLUS_2             10              114
  CLUS_3              3              122
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FER1L6 MUTATED       18      6      2
  FER1L6 WILD-TYPE    235     96     87
D979V4, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1             18              235
  CLUS_2              6               96
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FER1L6 MUTATED       10     17      4
  FER1L6 WILD-TYPE    154    230    139
D979V5, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1             10              154
  CLUS_2             17              230
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FER1L6 MUTATED        4      7     12      4      4
  FER1L6 WILD-TYPE    117     97     79    117    113
D979V6, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              7               97
  CLUS_3             12               79
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FER1L6 MUTATED        8     17      6
  FER1L6 WILD-TYPE    151    234    159
D979V7, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1              8              151
  CLUS_2             17              234
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FER1L6 MUTATED        6     12      5      4      4
  FER1L6 WILD-TYPE    112    119    146     90     77
D979V8, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1              6              112
  CLUS_2             12              119
  CLUS_3              5              146
  CLUS_4              4               90
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FER1L6 MUTATED        6     10      4      3      4
  FER1L6 WILD-TYPE    112    126    111     37     67
D979V9, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1              6              112
  CLUS_2             10              126
  CLUS_3              4              111
  CLUS_4              3               37
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FER1L6 MUTATED        2     11      6      4      4
  FER1L6 WILD-TYPE     46     98    124     97     88
D979V10, multiclass
        clus
vv       FER1L6 MUTATED FER1L6 WILD-TYPE
  CLUS_1              2               46
  CLUS_2             11               98
  CLUS_3              6              124
  CLUS_4              4               97
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(980) Variable = MGA MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MGA MUTATED        4      2     11     23
  MGA WILD-TYPE    131     90    161    153
D980V1, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1           4           131
  CLUS_2           2            90
  CLUS_3          11           161
  CLUS_4          23           153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MGA MUTATED       25      8      4
  MGA WILD-TYPE    190    147    158
D980V2, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1          25           190
  CLUS_2           8           147
  CLUS_3           4           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MGA MUTATED       12     18      2      2
  MGA WILD-TYPE    123    106    123     58
D980V3, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1          12           123
  CLUS_2          18           106
  CLUS_3           2           123
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MGA MUTATED       21     12      1
  MGA WILD-TYPE    232     90     88
D980V4, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1          21           232
  CLUS_2          12            90
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MGA MUTATED       10     24      5
  MGA WILD-TYPE    154    223    138
D980V5, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1          10           154
  CLUS_2          24           223
  CLUS_3           5           138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGA MUTATED        4      9     15      5      6
  MGA WILD-TYPE    117     95     76    116    111
D980V6, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1           4           117
  CLUS_2           9            95
  CLUS_3          15            76
  CLUS_4           5           116
  CLUS_5           6           111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  MGA MUTATED       10     29      2
  MGA WILD-TYPE    149    222    163
D980V7, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1          10           149
  CLUS_2          29           222
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGA MUTATED        5     14     15      5      2
  MGA WILD-TYPE    113    117    136     89     79
D980V8, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1           5           113
  CLUS_2          14           117
  CLUS_3          15           136
  CLUS_4           5            89
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGA MUTATED        6     13      2      3      9
  MGA WILD-TYPE    112    123    113     37     62
D980V9, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1           6           112
  CLUS_2          13           123
  CLUS_3           2           113
  CLUS_4           3            37
  CLUS_5           9            62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MGA MUTATED        3     12     12      1      5
  MGA WILD-TYPE     45     97    118    100     87
D980V10, multiclass
        clus
vv       MGA MUTATED MGA WILD-TYPE
  CLUS_1           3            45
  CLUS_2          12            97
  CLUS_3          12           118
  CLUS_4           1           100
  CLUS_5           5            87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(981) Variable = MYCT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYCT1 MUTATED        4      0      5      2
  MYCT1 WILD-TYPE    131     92    167    174
D981V1, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             5             167
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYCT1 MUTATED        6      3      0
  MYCT1 WILD-TYPE    209    152    162
D981V2, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             3             152
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYCT1 MUTATED        4      2      0      1
  MYCT1 WILD-TYPE    131    122    125     59
D981V3, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYCT1 MUTATED        7      0      0
  MYCT1 WILD-TYPE    246    102     89
D981V4, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYCT1 MUTATED        2      8      0
  MYCT1 WILD-TYPE    162    239    143
D981V5, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCT1 MUTATED        3      3      3      1      0
  MYCT1 WILD-TYPE    118    101     88    120    117
D981V6, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MYCT1 MUTATED        1      9      1
  MYCT1 WILD-TYPE    158    242    164
D981V7, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCT1 MUTATED        3      5      2      1      0
  MYCT1 WILD-TYPE    115    126    149     93     81
D981V8, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCT1 MUTATED        1      5      1      0      1
  MYCT1 WILD-TYPE    117    131    114     40     70
D981V9, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCT1 MUTATED        2      2      2      1      1
  MYCT1 WILD-TYPE     46    107    128    100     91
D981V10, multiclass
        clus
vv       MYCT1 MUTATED MYCT1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(982) Variable = KCNQ1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNQ1 MUTATED        0      0      0      6
  KCNQ1 WILD-TYPE    135     92    172    170
D982V1, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNQ1 MUTATED        4      0      1
  KCNQ1 WILD-TYPE    211    155    161
D982V2, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNQ1 MUTATED        4      1      1      0
  KCNQ1 WILD-TYPE    131    123    124     60
D982V3, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNQ1 MUTATED        5      1      0
  KCNQ1 WILD-TYPE    248    101     89
D982V4, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNQ1 MUTATED        1      4      1
  KCNQ1 WILD-TYPE    163    243    142
D982V5, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNQ1 MUTATED        0      1      4      0      1
  KCNQ1 WILD-TYPE    121    103     87    121    116
D982V6, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNQ1 MUTATED        0      5      1
  KCNQ1 WILD-TYPE    159    246    164
D982V7, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNQ1 MUTATED        1      3      2      0      0
  KCNQ1 WILD-TYPE    117    128    149     94     81
D982V8, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNQ1 MUTATED        0      1      0      1      1
  KCNQ1 WILD-TYPE    118    135    115     39     70
D982V9, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNQ1 MUTATED        1      1      1      0      0
  KCNQ1 WILD-TYPE     47    108    129    101     92
D982V10, multiclass
        clus
vv       KCNQ1 MUTATED KCNQ1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(983) Variable = LIMCH1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LIMCH1 MUTATED        2      3      3      8
  LIMCH1 WILD-TYPE    133     89    169    168
D983V1, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LIMCH1 MUTATED       11      2      3
  LIMCH1 WILD-TYPE    204    153    159
D983V2, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1             11              204
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LIMCH1 MUTATED        5      4      2      1
  LIMCH1 WILD-TYPE    130    120    123     59
D983V3, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LIMCH1 MUTATED        9      2      1
  LIMCH1 WILD-TYPE    244    100     88
D983V4, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LIMCH1 MUTATED        4      8      3
  LIMCH1 WILD-TYPE    160    239    140
D983V5, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              8              239
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIMCH1 MUTATED        2      2      4      4      3
  LIMCH1 WILD-TYPE    119    102     87    117    114
D983V6, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              4              117
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LIMCH1 MUTATED        2      7      7
  LIMCH1 WILD-TYPE    157    244    158
D983V7, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              7              244
  CLUS_3              7              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIMCH1 MUTATED        1      5      5      2      3
  LIMCH1 WILD-TYPE    117    126    146     92     78
D983V8, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              5              146
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIMCH1 MUTATED        2      4      6      1      3
  LIMCH1 WILD-TYPE    116    132    109     39     68
D983V9, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              132
  CLUS_3              6              109
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LIMCH1 MUTATED        0      3      6      5      2
  LIMCH1 WILD-TYPE     48    106    124     96     90
D983V10, multiclass
        clus
vv       LIMCH1 MUTATED LIMCH1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              6              124
  CLUS_4              5               96
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(984) Variable = KRTAP5-1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-1 MUTATED        2      0      0      8
  KRTAP5-1 WILD-TYPE    133     92    172    168
D984V1, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                8                168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-1 MUTATED        9      0      0
  KRTAP5-1 WILD-TYPE    206    155    162
D984V2, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP5-1 MUTATED        4      3      1      0
  KRTAP5-1 WILD-TYPE    131    121    124     60
D984V3, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                3                121
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-1 MUTATED        5      2      1
  KRTAP5-1 WILD-TYPE    248    100     88
D984V4, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                2                100
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-1 MUTATED        0      8      2
  KRTAP5-1 WILD-TYPE    164    239    141
D984V5, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                0                164
  CLUS_2                8                239
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP5-1 MUTATED        0      2      6      0      2
  KRTAP5-1 WILD-TYPE    121    102     85    121    115
D984V6, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                6                 85
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KRTAP5-1 MUTATED        2      7      1
  KRTAP5-1 WILD-TYPE    157    244    164
D984V7, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                7                244
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP5-1 MUTATED        1      7      2      0      0
  KRTAP5-1 WILD-TYPE    117    124    149     94     81
D984V8, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                7                124
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP5-1 MUTATED        0      7      0      1      0
  KRTAP5-1 WILD-TYPE    118    129    115     39     71
D984V9, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                7                129
  CLUS_3                0                115
  CLUS_4                1                 39
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP5-1 MUTATED        0      6      2      0      0
  KRTAP5-1 WILD-TYPE     48    103    128    101     92
D984V10, multiclass
        clus
vv       KRTAP5-1 MUTATED KRTAP5-1 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                6                103
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(985) Variable = C20ORF7 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C20ORF7 MUTATED        0      0      1      5
  C20ORF7 WILD-TYPE    135     92    171    171
D985V1, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C20ORF7 MUTATED        3      0      2
  C20ORF7 WILD-TYPE    212    155    160
D985V2, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               3               212
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C20ORF7 MUTATED        1      2      2      0
  C20ORF7 WILD-TYPE    134    122    123     60
D985V3, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C20ORF7 MUTATED        3      1      1
  C20ORF7 WILD-TYPE    250    101     88
D985V4, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C20ORF7 MUTATED        0      4      2
  C20ORF7 WILD-TYPE    164    243    141
D985V5, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF7 MUTATED        1      0      4      0      1
  C20ORF7 WILD-TYPE    120    104     87    121    116
D985V6, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C20ORF7 MUTATED        0      3      3
  C20ORF7 WILD-TYPE    159    248    162
D985V7, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               3               248
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF7 MUTATED        0      2      2      0      2
  C20ORF7 WILD-TYPE    118    129    149     94     79
D985V8, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               129
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF7 MUTATED        0      1      3      0      1
  C20ORF7 WILD-TYPE    118    135    112     40     70
D985V9, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               1               135
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C20ORF7 MUTATED        0      1      2      2      0
  C20ORF7 WILD-TYPE     48    108    128     99     92
D985V10, multiclass
        clus
vv       C20ORF7 MUTATED C20ORF7 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               2               128
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(986) Variable = KCNH2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNH2 MUTATED        3      1      2      9
  KCNH2 WILD-TYPE    132     91    170    167
D986V1, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH2 MUTATED        7      3      1
  KCNH2 WILD-TYPE    208    152    161
D986V2, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNH2 MUTATED        4      6      0      2
  KCNH2 WILD-TYPE    131    118    125     58
D986V3, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH2 MUTATED        8      4      0
  KCNH2 WILD-TYPE    245     98     89
D986V4, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH2 MUTATED        2     10      2
  KCNH2 WILD-TYPE    162    237    141
D986V5, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            10             237
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH2 MUTATED        1      4      6      1      2
  KCNH2 WILD-TYPE    120    100     85    120    115
D986V6, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNH2 MUTATED        1     13      1
  KCNH2 WILD-TYPE    158    238    164
D986V7, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            13             238
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH2 MUTATED        2      6      7      0      0
  KCNH2 WILD-TYPE    116    125    144     94     81
D986V8, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH2 MUTATED        0      8      0      0      3
  KCNH2 WILD-TYPE    118    128    115     40     68
D986V9, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             128
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNH2 MUTATED        1      6      4      0      0
  KCNH2 WILD-TYPE     47    103    126    101     92
D986V10, multiclass
        clus
vv       KCNH2 MUTATED KCNH2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(987) Variable = XRCC2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XRCC2 MUTATED        0      2      0      5
  XRCC2 WILD-TYPE    135     90    172    171
D987V1, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC2 MUTATED        3      0      1
  XRCC2 WILD-TYPE    212    155    161
D987V2, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XRCC2 MUTATED        2      3      0      1
  XRCC2 WILD-TYPE    133    121    125     59
D987V3, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC2 MUTATED        6      0      0
  XRCC2 WILD-TYPE    247    102     89
D987V4, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC2 MUTATED        1      5      1
  XRCC2 WILD-TYPE    163    242    142
D987V5, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC2 MUTATED        2      1      4      0      0
  XRCC2 WILD-TYPE    119    103     87    121    117
D987V6, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC2 MUTATED        2      5      0
  XRCC2 WILD-TYPE    157    246    165
D987V7, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             5             246
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC2 MUTATED        1      2      3      1      0
  XRCC2 WILD-TYPE    117    129    148     93     81
D987V8, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC2 MUTATED        1      2      0      0      1
  XRCC2 WILD-TYPE    117    134    115     40     70
D987V9, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC2 MUTATED        0      2      1      0      1
  XRCC2 WILD-TYPE     48    107    129    101     91
D987V10, multiclass
        clus
vv       XRCC2 MUTATED XRCC2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(988) Variable = EIF4G1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4G1 MUTATED        0      3      3     19
  EIF4G1 WILD-TYPE    135     89    169    157
D988V1, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G1 MUTATED       16      3      4
  EIF4G1 WILD-TYPE    199    152    158
D988V2, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1             16              199
  CLUS_2              3              152
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EIF4G1 MUTATED        7     12      0      2
  EIF4G1 WILD-TYPE    128    112    125     58
D988V3, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2             12              112
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G1 MUTATED       14      7      0
  EIF4G1 WILD-TYPE    239     95     89
D988V4, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1             14              239
  CLUS_2              7               95
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G1 MUTATED        5     16      2
  EIF4G1 WILD-TYPE    159    231    141
D988V5, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              5              159
  CLUS_2             16              231
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G1 MUTATED        0      5     14      3      1
  EIF4G1 WILD-TYPE    121     99     77    118    116
D988V6, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              5               99
  CLUS_3             14               77
  CLUS_4              3              118
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  EIF4G1 MUTATED        3     18      5
  EIF4G1 WILD-TYPE    156    233    160
D988V7, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             18              233
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G1 MUTATED        3      8      9      3      3
  EIF4G1 WILD-TYPE    115    123    142     91     78
D988V8, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              9              142
  CLUS_4              3               91
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G1 MUTATED        3      7      4      1      8
  EIF4G1 WILD-TYPE    115    129    111     39     63
D988V9, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              7              129
  CLUS_3              4              111
  CLUS_4              1               39
  CLUS_5              8               63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EIF4G1 MUTATED        1      7      9      3      3
  EIF4G1 WILD-TYPE     47    102    121     98     89
D988V10, multiclass
        clus
vv       EIF4G1 MUTATED EIF4G1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              7              102
  CLUS_3              9              121
  CLUS_4              3               98
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(989) Variable = PTPN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN3 MUTATED        1      3      2     13
  PTPN3 WILD-TYPE    134     89    170    163
D989V1, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             2             170
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN3 MUTATED       11      2      3
  PTPN3 WILD-TYPE    204    153    159
D989V2, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN3 MUTATED        6      6      1      1
  PTPN3 WILD-TYPE    129    118    124     59
D989V3, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN3 MUTATED        7      5      2
  PTPN3 WILD-TYPE    246     97     87
D989V4, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             5              97
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN3 MUTATED        4      9      6
  PTPN3 WILD-TYPE    160    238    137
D989V5, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN3 MUTATED        3      4      6      2      4
  PTPN3 WILD-TYPE    118    100     85    119    113
D989V6, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPN3 MUTATED        5     11      4
  PTPN3 WILD-TYPE    154    240    161
D989V7, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            11             240
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN3 MUTATED        2      7      6      2      3
  PTPN3 WILD-TYPE    116    124    145     92     78
D989V8, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN3 MUTATED        3      8      2      0      3
  PTPN3 WILD-TYPE    115    128    113     40     68
D989V9, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN3 MUTATED        0      5      7      2      2
  PTPN3 WILD-TYPE     48    104    123     99     90
D989V10, multiclass
        clus
vv       PTPN3 MUTATED PTPN3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(990) Variable = CRYBB1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRYBB1 MUTATED        2      0      5      6
  CRYBB1 WILD-TYPE    133     92    167    170
D990V1, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              5              167
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBB1 MUTATED        5      4      1
  CRYBB1 WILD-TYPE    210    151    161
D990V2, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              4              151
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CRYBB1 MUTATED        4      4      2      0
  CRYBB1 WILD-TYPE    131    120    123     60
D990V3, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBB1 MUTATED        6      3      1
  CRYBB1 WILD-TYPE    247     99     88
D990V4, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBB1 MUTATED        3      7      3
  CRYBB1 WILD-TYPE    161    240    140
D990V5, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBB1 MUTATED        2      2      5      2      2
  CRYBB1 WILD-TYPE    119    102     86    119    115
D990V6, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              2              119
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CRYBB1 MUTATED        3      9      1
  CRYBB1 WILD-TYPE    156    242    164
D990V7, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              9              242
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBB1 MUTATED        1      8      3      1      0
  CRYBB1 WILD-TYPE    117    123    148     93     81
D990V8, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              123
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBB1 MUTATED        3      5      0      0      1
  CRYBB1 WILD-TYPE    115    131    115     40     70
D990V9, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CRYBB1 MUTATED        0      5      3      0      1
  CRYBB1 WILD-TYPE     48    104    127    101     91
D990V10, multiclass
        clus
vv       CRYBB1 MUTATED CRYBB1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(991) Variable = DHX9 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DHX9 MUTATED        1      3      5     11
  DHX9 WILD-TYPE    134     89    167    165
D991V1, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3             89
  CLUS_3            5            167
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DHX9 MUTATED       12      3      4
  DHX9 WILD-TYPE    203    152    158
D991V2, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1           12            203
  CLUS_2            3            152
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DHX9 MUTATED        3      7      2      2
  DHX9 WILD-TYPE    132    117    123     58
D991V3, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DHX9 MUTATED        8      4      2
  DHX9 WILD-TYPE    245     98     87
D991V4, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            4             98
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DHX9 MUTATED        4     12      3
  DHX9 WILD-TYPE    160    235    140
D991V5, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           12            235
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHX9 MUTATED        3      6      3      2      5
  DHX9 WILD-TYPE    118     98     88    119    112
D991V6, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            6             98
  CLUS_3            3             88
  CLUS_4            2            119
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DHX9 MUTATED        5     11      4
  DHX9 WILD-TYPE    154    240    161
D991V7, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           11            240
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHX9 MUTATED        4      5      8      2      1
  DHX9 WILD-TYPE    114    126    143     92     80
D991V8, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            5            126
  CLUS_3            8            143
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHX9 MUTATED        3      6      3      0      4
  DHX9 WILD-TYPE    115    130    112     40     67
D991V9, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            6            130
  CLUS_3            3            112
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHX9 MUTATED        1      5      7      1      2
  DHX9 WILD-TYPE     47    104    123    100     90
D991V10, multiclass
        clus
vv       DHX9 MUTATED DHX9 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(992) Variable = RELB MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RELB MUTATED        1      0      3     10
  RELB WILD-TYPE    134     92    169    166
D992V1, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELB MUTATED        8      2      2
  RELB WILD-TYPE    207    153    160
D992V2, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RELB MUTATED        6      4      1      0
  RELB WILD-TYPE    129    120    124     60
D992V3, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            6            129
  CLUS_2            4            120
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELB MUTATED        7      3      1
  RELB WILD-TYPE    246     99     88
D992V4, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            7            246
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELB MUTATED        2     10      2
  RELB WILD-TYPE    162    237    141
D992V5, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            2            162
  CLUS_2           10            237
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELB MUTATED        0      6      5      1      2
  RELB WILD-TYPE    121     98     86    120    115
D992V6, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            0            121
  CLUS_2            6             98
  CLUS_3            5             86
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RELB MUTATED        1     10      3
  RELB WILD-TYPE    158    241    162
D992V7, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            1            158
  CLUS_2           10            241
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELB MUTATED        1      4      8      1      0
  RELB WILD-TYPE    117    127    143     93     81
D992V8, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            8            143
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELB MUTATED        0      5      2      1      4
  RELB WILD-TYPE    118    131    113     39     67
D992V9, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RELB MUTATED        0      3      6      2      1
  RELB WILD-TYPE     48    106    124     99     91
D992V10, multiclass
        clus
vv       RELB MUTATED RELB WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(993) Variable = GPATCH8 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPATCH8 MUTATED        5      3      5     19
  GPATCH8 WILD-TYPE    130     89    167    157
D993V1, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               3                89
  CLUS_3               5               167
  CLUS_4              19               157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH8 MUTATED       13      6      9
  GPATCH8 WILD-TYPE    202    149    153
D993V2, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1              13               202
  CLUS_2               6               149
  CLUS_3               9               153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPATCH8 MUTATED        9     12      3      1
  GPATCH8 WILD-TYPE    126    112    122     59
D993V3, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               9               126
  CLUS_2              12               112
  CLUS_3               3               122
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH8 MUTATED       16      7      2
  GPATCH8 WILD-TYPE    237     95     87
D993V4, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1              16               237
  CLUS_2               7                95
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH8 MUTATED        6     16      7
  GPATCH8 WILD-TYPE    158    231    136
D993V5, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              16               231
  CLUS_3               7               136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH8 MUTATED        8      8      6      2      5
  GPATCH8 WILD-TYPE    113     96     85    119    112
D993V6, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               8               113
  CLUS_2               8                96
  CLUS_3               6                85
  CLUS_4               2               119
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPATCH8 MUTATED        6     20      6
  GPATCH8 WILD-TYPE    153    231    159
D993V7, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               6               153
  CLUS_2              20               231
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH8 MUTATED        7     10     12      1      2
  GPATCH8 WILD-TYPE    111    121    139     93     79
D993V8, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               7               111
  CLUS_2              10               121
  CLUS_3              12               139
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH8 MUTATED        4      9      2      1      8
  GPATCH8 WILD-TYPE    114    127    113     39     63
D993V9, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               9               127
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               8                63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPATCH8 MUTATED        6      8      6      3      1
  GPATCH8 WILD-TYPE     42    101    124     98     91
D993V10, multiclass
        clus
vv       GPATCH8 MUTATED GPATCH8 WILD-TYPE
  CLUS_1               6                42
  CLUS_2               8               101
  CLUS_3               6               124
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(994) Variable = ZCCHC7 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCCHC7 MUTATED        0      0      1      6
  ZCCHC7 WILD-TYPE    135     92    171    170
D994V1, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC7 MUTATED        5      1      1
  ZCCHC7 WILD-TYPE    210    154    161
D994V2, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCCHC7 MUTATED        3      2      2      0
  ZCCHC7 WILD-TYPE    132    122    123     60
D994V3, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              2              122
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC7 MUTATED        5      1      1
  ZCCHC7 WILD-TYPE    248    101     88
D994V4, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC7 MUTATED        2      4      1
  ZCCHC7 WILD-TYPE    162    243    142
D994V5, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              4              243
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC7 MUTATED        1      0      4      1      1
  ZCCHC7 WILD-TYPE    120    104     87    120    116
D994V6, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              0              104
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC7 MUTATED        1      5      1
  ZCCHC7 WILD-TYPE    158    246    164
D994V7, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC7 MUTATED        0      3      2      1      1
  ZCCHC7 WILD-TYPE    118    128    149     93     80
D994V8, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC7 MUTATED        1      2      1      1      1
  ZCCHC7 WILD-TYPE    117    134    114     39     70
D994V9, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC7 MUTATED        1      2      2      0      1
  ZCCHC7 WILD-TYPE     47    107    128    101     91
D994V10, multiclass
        clus
vv       ZCCHC7 MUTATED ZCCHC7 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(995) Variable = VWA3A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VWA3A MUTATED        1      2      5      6
  VWA3A WILD-TYPE    134     90    167    170
D995V1, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             5             167
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VWA3A MUTATED        8      4      3
  VWA3A WILD-TYPE    207    151    159
D995V2, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             8             207
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VWA3A MUTATED        4      6      1      1
  VWA3A WILD-TYPE    131    118    124     59
D995V3, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VWA3A MUTATED        5      6      1
  VWA3A WILD-TYPE    248     96     88
D995V4, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             5             248
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VWA3A MUTATED        5      7      3
  VWA3A WILD-TYPE    159    240    140
D995V5, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             5             159
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA3A MUTATED        1      2      6      4      2
  VWA3A WILD-TYPE    120    102     85    117    115
D995V6, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             4             117
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VWA3A MUTATED        4      9      2
  VWA3A WILD-TYPE    155    242    163
D995V7, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             4             155
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA3A MUTATED        1      8      3      3      0
  VWA3A WILD-TYPE    117    123    148     91     81
D995V8, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             3             148
  CLUS_4             3              91
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA3A MUTATED        4      5      1      2      2
  VWA3A WILD-TYPE    114    131    114     38     69
D995V9, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             4             114
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA3A MUTATED        1      5      4      1      3
  VWA3A WILD-TYPE     47    104    126    100     89
D995V10, multiclass
        clus
vv       VWA3A MUTATED VWA3A WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(996) Variable = SET MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SET MUTATED        0      6      0      4
  SET WILD-TYPE    135     86    172    172
D996V1, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           0           135
  CLUS_2           6            86
  CLUS_3           0           172
  CLUS_4           4           172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SET MUTATED        4      3      1
  SET WILD-TYPE    211    152    161
D996V2, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           4           211
  CLUS_2           3           152
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SET MUTATED        2      6      0      1
  SET WILD-TYPE    133    118    125     59
D996V3, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           2           133
  CLUS_2           6           118
  CLUS_3           0           125
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SET MUTATED        6      3      0
  SET WILD-TYPE    247     99     89
D996V4, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           6           247
  CLUS_2           3            99
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SET MUTATED        2      7      0
  SET WILD-TYPE    162    240    143
D996V5, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           2           162
  CLUS_2           7           240
  CLUS_3           0           143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SET MUTATED        2      4      2      1      0
  SET WILD-TYPE    119    100     89    120    117
D996V6, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           2           119
  CLUS_2           4           100
  CLUS_3           2            89
  CLUS_4           1           120
  CLUS_5           0           117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SET MUTATED        4      5      1
  SET WILD-TYPE    155    246    164
D996V7, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           4           155
  CLUS_2           5           246
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SET MUTATED        2      5      0      1      2
  SET WILD-TYPE    116    126    151     93     79
D996V8, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           2           116
  CLUS_2           5           126
  CLUS_3           0           151
  CLUS_4           1            93
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SET MUTATED        1      3      0      1      2
  SET WILD-TYPE    117    133    115     39     69
D996V9, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           1           117
  CLUS_2           3           133
  CLUS_3           0           115
  CLUS_4           1            39
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SET MUTATED        0      3      2      1      1
  SET WILD-TYPE     48    106    128    100     91
D996V10, multiclass
        clus
vv       SET MUTATED SET WILD-TYPE
  CLUS_1           0            48
  CLUS_2           3           106
  CLUS_3           2           128
  CLUS_4           1           100
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(997) Variable = RAVER1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAVER1 MUTATED        2      0      2      4
  RAVER1 WILD-TYPE    133     92    170    172
D997V1, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RAVER1 MUTATED        8      1      0
  RAVER1 WILD-TYPE    207    154    162
D997V2, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAVER1 MUTATED        2      3      1      0
  RAVER1 WILD-TYPE    133    121    124     60
D997V3, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RAVER1 MUTATED        5      1      0
  RAVER1 WILD-TYPE    248    101     89
D997V4, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RAVER1 MUTATED        3      6      0
  RAVER1 WILD-TYPE    161    241    143
D997V5, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAVER1 MUTATED        2      0      6      1      0
  RAVER1 WILD-TYPE    119    104     85    120    117
D997V6, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              0              104
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RAVER1 MUTATED        2      7      0
  RAVER1 WILD-TYPE    157    244    165
D997V7, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAVER1 MUTATED        0      7      1      1      0
  RAVER1 WILD-TYPE    118    124    150     93     81
D997V8, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              124
  CLUS_3              1              150
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAVER1 MUTATED        2      5      0      2      0
  RAVER1 WILD-TYPE    116    131    115     38     71
D997V9, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAVER1 MUTATED        0      6      2      0      1
  RAVER1 WILD-TYPE     48    103    128    101     91
D997V10, multiclass
        clus
vv       RAVER1 MUTATED RAVER1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(998) Variable = PTPRU MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPRU MUTATED        4      1      8     17
  PTPRU WILD-TYPE    131     91    164    159
D998V1, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             8             164
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRU MUTATED       16      6      5
  PTPRU WILD-TYPE    199    149    157
D998V2, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1            16             199
  CLUS_2             6             149
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPRU MUTATED       13      6      3      2
  PTPRU WILD-TYPE    122    118    122     58
D998V3, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1            13             122
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRU MUTATED       20      3      1
  PTPRU WILD-TYPE    233     99     88
D998V4, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1            20             233
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRU MUTATED       11     14      3
  PTPRU WILD-TYPE    153    233    140
D998V5, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1            11             153
  CLUS_2            14             233
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRU MUTATED        5      7      8      7      1
  PTPRU WILD-TYPE    116     97     83    114    116
D998V6, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1             5             116
  CLUS_2             7              97
  CLUS_3             8              83
  CLUS_4             7             114
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRU MUTATED        9     18      3
  PTPRU WILD-TYPE    150    233    162
D998V7, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1             9             150
  CLUS_2            18             233
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRU MUTATED        3     12      9      5      1
  PTPRU WILD-TYPE    115    119    142     89     80
D998V8, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1             3             115
  CLUS_2            12             119
  CLUS_3             9             142
  CLUS_4             5              89
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRU MUTATED        8      7      2      2      6
  PTPRU WILD-TYPE    110    129    113     38     65
D998V9, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1             8             110
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRU MUTATED        3      9      7      1      5
  PTPRU WILD-TYPE     45    100    123    100     87
D998V10, multiclass
        clus
vv       PTPRU MUTATED PTPRU WILD-TYPE
  CLUS_1             3              45
  CLUS_2             9             100
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             5              87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(999) Variable = SOS2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOS2 MUTATED        3      0      2     14
  SOS2 WILD-TYPE    132     92    170    162
D999V1, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOS2 MUTATED       10      3      3
  SOS2 WILD-TYPE    205    152    159
D999V2, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SOS2 MUTATED        5      7      2      2
  SOS2 WILD-TYPE    130    117    123     58
D999V3, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            7            117
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOS2 MUTATED        9      5      2
  SOS2 WILD-TYPE    244     97     87
D999V4, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            5             97
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOS2 MUTATED        2     12      5
  SOS2 WILD-TYPE    162    235    138
D999V5, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            2            162
  CLUS_2           12            235
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOS2 MUTATED        1      6      9      1      2
  SOS2 WILD-TYPE    120     98     82    120    115
D999V6, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            6             98
  CLUS_3            9             82
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SOS2 MUTATED        3     12      4
  SOS2 WILD-TYPE    156    239    161
D999V7, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           12            239
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOS2 MUTATED        2      9      5      1      2
  SOS2 WILD-TYPE    116    122    146     93     79
D999V8, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            9            122
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOS2 MUTATED        1      4      2      0      5
  SOS2 WILD-TYPE    117    132    113     40     66
D999V9, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SOS2 MUTATED        0      3      7      1      1
  SOS2 WILD-TYPE     48    106    123    100     91
D999V10, multiclass
        clus
vv       SOS2 MUTATED SOS2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1000) Variable = HSF4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSF4 MUTATED        1      0      1      8
  HSF4 WILD-TYPE    134     92    171    168
D1000V1, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HSF4 MUTATED        7      1      2
  HSF4 WILD-TYPE    208    154    160
D1000V2, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSF4 MUTATED        2      6      2      0
  HSF4 WILD-TYPE    133    118    123     60
D1000V3, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HSF4 MUTATED        5      3      2
  HSF4 WILD-TYPE    248     99     87
D1000V4, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            3             99
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HSF4 MUTATED        2      4      3
  HSF4 WILD-TYPE    162    243    140
D1000V5, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSF4 MUTATED        0      1      4      2      2
  HSF4 WILD-TYPE    121    103     87    119    115
D1000V6, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HSF4 MUTATED        1      7      2
  HSF4 WILD-TYPE    158    244    163
D1000V7, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            7            244
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSF4 MUTATED        0      2      5      1      2
  HSF4 WILD-TYPE    118    129    146     93     79
D1000V8, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSF4 MUTATED        1      2      2      0      5
  HSF4 WILD-TYPE    117    134    113     40     66
D1000V9, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSF4 MUTATED        0      1      7      1      1
  HSF4 WILD-TYPE     48    108    123    100     91
D1000V10, multiclass
        clus
vv       HSF4 MUTATED HSF4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1001) Variable = OR51F1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR51F1 MUTATED        4      0      1      7
  OR51F1 WILD-TYPE    131     92    171    169
D1001V1, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR51F1 MUTATED        8      0      3
  OR51F1 WILD-TYPE    207    155    159
D1001V2, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR51F1 MUTATED        6      3      1      1
  OR51F1 WILD-TYPE    129    121    124     59
D1001V3, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR51F1 MUTATED        8      3      0
  OR51F1 WILD-TYPE    245     99     89
D1001V4, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR51F1 MUTATED        3      7      2
  OR51F1 WILD-TYPE    161    240    141
D1001V5, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              7              240
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR51F1 MUTATED        3      1      5      0      3
  OR51F1 WILD-TYPE    118    103     86    121    114
D1001V6, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              1              103
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR51F1 MUTATED        3      7      1
  OR51F1 WILD-TYPE    156    244    164
D1001V7, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              7              244
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR51F1 MUTATED        1      7      3      0      0
  OR51F1 WILD-TYPE    117    124    148     94     81
D1001V8, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              124
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR51F1 MUTATED        3      3      0      2      2
  OR51F1 WILD-TYPE    115    133    115     38     69
D1001V9, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR51F1 MUTATED        3      4      3      0      0
  OR51F1 WILD-TYPE     45    105    127    101     92
D1001V10, multiclass
        clus
vv       OR51F1 MUTATED OR51F1 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1002) Variable = DNAH10 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAH10 MUTATED        8      7     12     36
  DNAH10 WILD-TYPE    127     85    160    140
D1002V1, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              7               85
  CLUS_3             12              160
  CLUS_4             36              140
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAH10 MUTATED       35     11      7
  DNAH10 WILD-TYPE    180    144    155
D1002V2, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             35              180
  CLUS_2             11              144
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DNAH10 MUTATED       17     24     11      4
  DNAH10 WILD-TYPE    118    100    114     56
D1002V3, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             17              118
  CLUS_2             24              100
  CLUS_3             11              114
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAH10 MUTATED       30     15     11
  DNAH10 WILD-TYPE    223     87     78
D1002V4, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             30              223
  CLUS_2             15               87
  CLUS_3             11               78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAH10 MUTATED       10     35     16
  DNAH10 WILD-TYPE    154    212    127
D1002V5, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             10              154
  CLUS_2             35              212
  CLUS_3             16              127
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH10 MUTATED       10     13     21      8      9
  DNAH10 WILD-TYPE    111     91     70    113    108
D1002V6, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             10              111
  CLUS_2             13               91
  CLUS_3             21               70
  CLUS_4              8              113
  CLUS_5              9              108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DNAH10 MUTATED       11     40     12
  DNAH10 WILD-TYPE    148    211    153
D1002V7, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             11              148
  CLUS_2             40              211
  CLUS_3             12              153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH10 MUTATED        7     21     24      7      4
  DNAH10 WILD-TYPE    111    110    127     87     77
D1002V8, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1              7              111
  CLUS_2             21              110
  CLUS_3             24              127
  CLUS_4              7               87
  CLUS_5              4               77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH10 MUTATED       10     16      7      2     13
  DNAH10 WILD-TYPE    108    120    108     38     58
D1002V9, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1             10              108
  CLUS_2             16              120
  CLUS_3              7              108
  CLUS_4              2               38
  CLUS_5             13               58
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DNAH10 MUTATED        5     16     17      3      7
  DNAH10 WILD-TYPE     43     93    113     98     85
D1002V10, multiclass
        clus
vv       DNAH10 MUTATED DNAH10 WILD-TYPE
  CLUS_1              5               43
  CLUS_2             16               93
  CLUS_3             17              113
  CLUS_4              3               98
  CLUS_5              7               85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1003) Variable = PTX4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTX4 MUTATED        1      1      3     10
  PTX4 WILD-TYPE    134     91    169    166
D1003V1, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTX4 MUTATED       10      3      2
  PTX4 WILD-TYPE    205    152    160
D1003V2, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTX4 MUTATED        6      5      0      1
  PTX4 WILD-TYPE    129    119    125     59
D1003V3, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTX4 MUTATED        7      4      1
  PTX4 WILD-TYPE    246     98     88
D1003V4, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTX4 MUTATED        3      9      4
  PTX4 WILD-TYPE    161    238    139
D1003V5, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            9            238
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTX4 MUTATED        3      0      7      3      3
  PTX4 WILD-TYPE    118    104     84    118    114
D1003V6, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            0            104
  CLUS_3            7             84
  CLUS_4            3            118
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PTX4 MUTATED        4     10      2
  PTX4 WILD-TYPE    155    241    163
D1003V7, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           10            241
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTX4 MUTATED        2      5      6      2      1
  PTX4 WILD-TYPE    116    126    145     92     80
D1003V8, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            6            145
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTX4 MUTATED        2      5      2      2      2
  PTX4 WILD-TYPE    116    131    113     38     69
D1003V9, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTX4 MUTATED        1      4      5      1      2
  PTX4 WILD-TYPE     47    105    125    100     90
D1003V10, multiclass
        clus
vv       PTX4 MUTATED PTX4 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            5            125
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1004) Variable = AMELX MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMELX MUTATED        2      0      1      3
  AMELX WILD-TYPE    133     92    171    173
D1004V1, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMELX MUTATED        6      0      0
  AMELX WILD-TYPE    209    155    162
D1004V2, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMELX MUTATED        4      1      1      0
  AMELX WILD-TYPE    131    123    124     60
D1004V3, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMELX MUTATED        5      0      1
  AMELX WILD-TYPE    248    102     88
D1004V4, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             5             248
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMELX MUTATED        0      5      1
  AMELX WILD-TYPE    164    242    142
D1004V5, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             0             164
  CLUS_2             5             242
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMELX MUTATED        0      2      3      0      1
  AMELX WILD-TYPE    121    102     88    121    116
D1004V6, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMELX MUTATED        0      4      2
  AMELX WILD-TYPE    159    247    163
D1004V7, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             0             159
  CLUS_2             4             247
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMELX MUTATED        0      3      2      0      1
  AMELX WILD-TYPE    118    128    149     94     80
D1004V8, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMELX MUTATED        0      0      2      0      2
  AMELX WILD-TYPE    118    136    113     40     69
D1004V9, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             136
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMELX MUTATED        0      1      2      1      0
  AMELX WILD-TYPE     48    108    128    100     92
D1004V10, multiclass
        clus
vv       AMELX MUTATED AMELX WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1005) Variable = CHD3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHD3 MUTATED        5      2      8     23
  CHD3 WILD-TYPE    130     90    164    153
D1005V1, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            2             90
  CLUS_3            8            164
  CLUS_4           23            153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD3 MUTATED       23      5      7
  CHD3 WILD-TYPE    192    150    155
D1005V2, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1           23            192
  CLUS_2            5            150
  CLUS_3            7            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHD3 MUTATED       13      9      4      3
  CHD3 WILD-TYPE    122    115    121     57
D1005V3, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1           13            122
  CLUS_2            9            115
  CLUS_3            4            121
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD3 MUTATED       18      8      3
  CHD3 WILD-TYPE    235     94     86
D1005V4, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1           18            235
  CLUS_2            8             94
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD3 MUTATED        6     25      4
  CHD3 WILD-TYPE    158    222    139
D1005V5, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            6            158
  CLUS_2           25            222
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD3 MUTATED        4      9     13      6      3
  CHD3 WILD-TYPE    117     95     78    115    114
D1005V6, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            9             95
  CLUS_3           13             78
  CLUS_4            6            115
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD3 MUTATED        4     23     10
  CHD3 WILD-TYPE    155    228    155
D1005V7, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           23            228
  CLUS_3           10            155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD3 MUTATED        2     16     10      3      6
  CHD3 WILD-TYPE    116    115    141     91     75
D1005V8, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           16            115
  CLUS_3           10            141
  CLUS_4            3             91
  CLUS_5            6             75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD3 MUTATED        3     13      6      2      9
  CHD3 WILD-TYPE    115    123    109     38     62
D1005V9, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           13            123
  CLUS_3            6            109
  CLUS_4            2             38
  CLUS_5            9             62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD3 MUTATED        1     11     12      6      3
  CHD3 WILD-TYPE     47     98    118     95     89
D1005V10, multiclass
        clus
vv       CHD3 MUTATED CHD3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2           11             98
  CLUS_3           12            118
  CLUS_4            6             95
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1006) Variable = PCDH15 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCDH15 MUTATED       17      8     22     32
  PCDH15 WILD-TYPE    118     84    150    144
D1006V1, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             17              118
  CLUS_2              8               84
  CLUS_3             22              150
  CLUS_4             32              144
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH15 MUTATED       32     20     21
  PCDH15 WILD-TYPE    183    135    141
D1006V2, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             32              183
  CLUS_2             20              135
  CLUS_3             21              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCDH15 MUTATED       17     24     15      8
  PCDH15 WILD-TYPE    118    100    110     52
D1006V3, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             17              118
  CLUS_2             24              100
  CLUS_3             15              110
  CLUS_4              8               52
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH15 MUTATED       38     15     11
  PCDH15 WILD-TYPE    215     87     78
D1006V4, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             38              215
  CLUS_2             15               87
  CLUS_3             11               78
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH15 MUTATED       16     45     18
  PCDH15 WILD-TYPE    148    202    125
D1006V5, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             16              148
  CLUS_2             45              202
  CLUS_3             18              125
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH15 MUTATED       16     12     25     12     14
  PCDH15 WILD-TYPE    105     92     66    109    103
D1006V6, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             16              105
  CLUS_2             12               92
  CLUS_3             25               66
  CLUS_4             12              109
  CLUS_5             14              103
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH15 MUTATED       20     45     16
  PCDH15 WILD-TYPE    139    206    149
D1006V7, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             20              139
  CLUS_2             45              206
  CLUS_3             16              149
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH15 MUTATED       19     26     20      9      7
  PCDH15 WILD-TYPE     99    105    131     85     74
D1006V8, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             19               99
  CLUS_2             26              105
  CLUS_3             20              131
  CLUS_4              9               85
  CLUS_5              7               74
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH15 MUTATED       18     17     10      6     14
  PCDH15 WILD-TYPE    100    119    105     34     57
D1006V9, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1             18              100
  CLUS_2             17              119
  CLUS_3             10              105
  CLUS_4              6               34
  CLUS_5             14               57
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH15 MUTATED        6     20     15     15      9
  PCDH15 WILD-TYPE     42     89    115     86     83
D1006V10, multiclass
        clus
vv       PCDH15 MUTATED PCDH15 WILD-TYPE
  CLUS_1              6               42
  CLUS_2             20               89
  CLUS_3             15              115
  CLUS_4             15               86
  CLUS_5              9               83
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1007) Variable = NKD2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        1      0      2      3
  NKD2 WILD-TYPE    134     92    170    173
D1007V1, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        3      2      0
  NKD2 WILD-TYPE    212    153    162
D1007V2, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NKD2 MUTATED        2      2      0      0
  NKD2 WILD-TYPE    133    122    125     60
D1007V3, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        4      0      0
  NKD2 WILD-TYPE    249    102     89
D1007V4, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        3      3      0
  NKD2 WILD-TYPE    161    244    143
D1007V5, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            3            244
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NKD2 MUTATED        0      1      2      3      0
  NKD2 WILD-TYPE    121    103     89    118    117
D1007V6, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            3            118
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NKD2 MUTATED        3      2      1
  NKD2 WILD-TYPE    156    249    164
D1007V7, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            2            249
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NKD2 MUTATED        1      2      1      2      0
  NKD2 WILD-TYPE    117    129    150     92     81
D1007V8, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            1            150
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NKD2 MUTATED        3      1      1      0      0
  NKD2 WILD-TYPE    115    135    114     40     71
D1007V9, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NKD2 MUTATED        1      1      0      1      2
  NKD2 WILD-TYPE     47    108    130    100     90
D1007V10, multiclass
        clus
vv       NKD2 MUTATED NKD2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            0            130
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1008) Variable = BUB1B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BUB1B MUTATED        2      1      2     10
  BUB1B WILD-TYPE    133     91    170    166
D1008V1, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BUB1B MUTATED       11      2      1
  BUB1B WILD-TYPE    204    153    161
D1008V2, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1            11             204
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BUB1B MUTATED        5      5      2      0
  BUB1B WILD-TYPE    130    119    123     60
D1008V3, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BUB1B MUTATED        8      2      2
  BUB1B WILD-TYPE    245    100     87
D1008V4, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BUB1B MUTATED        3      8      2
  BUB1B WILD-TYPE    161    239    141
D1008V5, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BUB1B MUTATED        0      2      7      2      2
  BUB1B WILD-TYPE    121    102     84    119    115
D1008V6, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BUB1B MUTATED        2     13      0
  BUB1B WILD-TYPE    157    238    165
D1008V7, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             2             157
  CLUS_2            13             238
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BUB1B MUTATED        1      7      5      2      0
  BUB1B WILD-TYPE    117    124    146     92     81
D1008V8, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BUB1B MUTATED        2      5      0      2      4
  BUB1B WILD-TYPE    116    131    115     38     67
D1008V9, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BUB1B MUTATED        2      5      4      0      2
  BUB1B WILD-TYPE     46    104    126    101     90
D1008V10, multiclass
        clus
vv       BUB1B MUTATED BUB1B WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1009) Variable = EXOSC10 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EXOSC10 MUTATED        2      0      2     10
  EXOSC10 WILD-TYPE    133     92    170    166
D1009V1, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4              10               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EXOSC10 MUTATED        9      1      3
  EXOSC10 WILD-TYPE    206    154    159
D1009V2, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               9               206
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EXOSC10 MUTATED        2      4      3      1
  EXOSC10 WILD-TYPE    133    120    122     59
D1009V3, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               4               120
  CLUS_3               3               122
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EXOSC10 MUTATED        5      3      2
  EXOSC10 WILD-TYPE    248     99     87
D1009V4, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               3                99
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EXOSC10 MUTATED        2      7      6
  EXOSC10 WILD-TYPE    162    240    137
D1009V5, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               7               240
  CLUS_3               6               137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXOSC10 MUTATED        1      1      6      2      5
  EXOSC10 WILD-TYPE    120    103     85    119    112
D1009V6, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               6                85
  CLUS_4               2               119
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EXOSC10 MUTATED        0      9      6
  EXOSC10 WILD-TYPE    159    242    159
D1009V7, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               9               242
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXOSC10 MUTATED        1      5      7      1      1
  EXOSC10 WILD-TYPE    117    126    144     93     80
D1009V8, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               7               144
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXOSC10 MUTATED        0      5      2      3      2
  EXOSC10 WILD-TYPE    118    131    113     37     69
D1009V9, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               2               113
  CLUS_4               3                37
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EXOSC10 MUTATED        0      4      5      2      1
  EXOSC10 WILD-TYPE     48    105    125     99     91
D1009V10, multiclass
        clus
vv       EXOSC10 MUTATED EXOSC10 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               5               125
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1010) Variable = KCNN3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNN3 MUTATED        1      1      3     10
  KCNN3 WILD-TYPE    134     91    169    166
D1010V1, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNN3 MUTATED        9      2      1
  KCNN3 WILD-TYPE    206    153    161
D1010V2, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNN3 MUTATED        6      3      1      1
  KCNN3 WILD-TYPE    129    121    124     59
D1010V3, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNN3 MUTATED        9      1      1
  KCNN3 WILD-TYPE    244    101     88
D1010V4, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNN3 MUTATED        3      9      2
  KCNN3 WILD-TYPE    161    238    141
D1010V5, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             9             238
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNN3 MUTATED        0      2      7      3      2
  KCNN3 WILD-TYPE    121    102     84    118    115
D1010V6, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             3             118
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNN3 MUTATED        2     11      2
  KCNN3 WILD-TYPE    157    240    163
D1010V7, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNN3 MUTATED        1      9      2      1      2
  KCNN3 WILD-TYPE    117    122    149     93     79
D1010V8, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             122
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNN3 MUTATED        2      5      2      1      0
  KCNN3 WILD-TYPE    116    131    113     39     71
D1010V9, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNN3 MUTATED        1      4      3      1      1
  KCNN3 WILD-TYPE     47    105    127    100     91
D1010V10, multiclass
        clus
vv       KCNN3 MUTATED KCNN3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1011) Variable = TIE1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIE1 MUTATED        5      3      4     16
  TIE1 WILD-TYPE    130     89    168    160
D1011V1, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3             89
  CLUS_3            4            168
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIE1 MUTATED       15      2      8
  TIE1 WILD-TYPE    200    153    154
D1011V2, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1           15            200
  CLUS_2            2            153
  CLUS_3            8            154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIE1 MUTATED        7     10      3      3
  TIE1 WILD-TYPE    128    114    122     57
D1011V3, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            7            128
  CLUS_2           10            114
  CLUS_3            3            122
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIE1 MUTATED       13      6      4
  TIE1 WILD-TYPE    240     96     85
D1011V4, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            6             96
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIE1 MUTATED        5     14      7
  TIE1 WILD-TYPE    159    233    136
D1011V5, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            5            159
  CLUS_2           14            233
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIE1 MUTATED        4      4     10      2      6
  TIE1 WILD-TYPE    117    100     81    119    111
D1011V6, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            4            100
  CLUS_3           10             81
  CLUS_4            2            119
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIE1 MUTATED        4     15      9
  TIE1 WILD-TYPE    155    236    156
D1011V7, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           15            236
  CLUS_3            9            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIE1 MUTATED        5     10      9      1      3
  TIE1 WILD-TYPE    113    121    142     93     78
D1011V8, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            5            113
  CLUS_2           10            121
  CLUS_3            9            142
  CLUS_4            1             93
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIE1 MUTATED        2      7      6      2      5
  TIE1 WILD-TYPE    116    129    109     38     66
D1011V9, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            129
  CLUS_3            6            109
  CLUS_4            2             38
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIE1 MUTATED        3      7      7      4      1
  TIE1 WILD-TYPE     45    102    123     97     91
D1011V10, multiclass
        clus
vv       TIE1 MUTATED TIE1 WILD-TYPE
  CLUS_1            3             45
  CLUS_2            7            102
  CLUS_3            7            123
  CLUS_4            4             97
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1012) Variable = MBOAT2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBOAT2 MUTATED        1      0      0      3
  MBOAT2 WILD-TYPE    134     92    172    173
D1012V1, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MBOAT2 MUTATED        3      0      0
  MBOAT2 WILD-TYPE    212    155    162
D1012V2, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBOAT2 MUTATED        2      1      0      0
  MBOAT2 WILD-TYPE    133    123    125     60
D1012V3, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MBOAT2 MUTATED        3      0      0
  MBOAT2 WILD-TYPE    250    102     89
D1012V4, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MBOAT2 MUTATED        1      3      0
  MBOAT2 WILD-TYPE    163    244    143
D1012V5, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBOAT2 MUTATED        0      2      1      1      0
  MBOAT2 WILD-TYPE    121    102     90    120    117
D1012V6, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              1               90
  CLUS_4              1              120
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MBOAT2 MUTATED        0      4      0
  MBOAT2 WILD-TYPE    159    247    165
D1012V7, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              4              247
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBOAT2 MUTATED        0      3      1      0      0
  MBOAT2 WILD-TYPE    118    128    150     94     81
D1012V8, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBOAT2 MUTATED        0      3      0      0      0
  MBOAT2 WILD-TYPE    118    133    115     40     71
D1012V9, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBOAT2 MUTATED        0      2      1      0      0
  MBOAT2 WILD-TYPE     48    107    129    101     92
D1012V10, multiclass
        clus
vv       MBOAT2 MUTATED MBOAT2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1013) Variable = HORMAD1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HORMAD1 MUTATED        1      2      2      4
  HORMAD1 WILD-TYPE    134     90    170    172
D1013V1, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HORMAD1 MUTATED        6      1      0
  HORMAD1 WILD-TYPE    209    154    162
D1013V2, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HORMAD1 MUTATED        3      3      2      1
  HORMAD1 WILD-TYPE    132    121    123     59
D1013V3, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               3               121
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HORMAD1 MUTATED        7      1      1
  HORMAD1 WILD-TYPE    246    101     88
D1013V4, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HORMAD1 MUTATED        1      6      1
  HORMAD1 WILD-TYPE    163    241    142
D1013V5, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HORMAD1 MUTATED        1      2      2      1      2
  HORMAD1 WILD-TYPE    120    102     89    120    115
D1013V6, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  HORMAD1 MUTATED        2      5      2
  HORMAD1 WILD-TYPE    157    246    163
D1013V7, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               5               246
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HORMAD1 MUTATED        1      2      4      1      1
  HORMAD1 WILD-TYPE    117    129    147     93     80
D1013V8, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               129
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HORMAD1 MUTATED        0      2      3      0      1
  HORMAD1 WILD-TYPE    118    134    112     40     70
D1013V9, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HORMAD1 MUTATED        0      1      3      1      1
  HORMAD1 WILD-TYPE     48    108    127    100     91
D1013V10, multiclass
        clus
vv       HORMAD1 MUTATED HORMAD1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               1               108
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1014) Variable = KIAA1549 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1549 MUTATED        3      4      3     23
  KIAA1549 WILD-TYPE    132     88    169    153
D1014V1, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                4                 88
  CLUS_3                3                169
  CLUS_4               23                153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1549 MUTATED       19      7      4
  KIAA1549 WILD-TYPE    196    148    158
D1014V2, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1               19                196
  CLUS_2                7                148
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA1549 MUTATED        7     12      2      4
  KIAA1549 WILD-TYPE    128    112    123     56
D1014V3, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                7                128
  CLUS_2               12                112
  CLUS_3                2                123
  CLUS_4                4                 56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1549 MUTATED       17      7      1
  KIAA1549 WILD-TYPE    236     95     88
D1014V4, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1               17                236
  CLUS_2                7                 95
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1549 MUTATED        8     16      8
  KIAA1549 WILD-TYPE    156    231    135
D1014V5, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                8                156
  CLUS_2               16                231
  CLUS_3                8                135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1549 MUTATED        4      5     15      4      4
  KIAA1549 WILD-TYPE    117     99     76    117    113
D1014V6, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                4                117
  CLUS_2                5                 99
  CLUS_3               15                 76
  CLUS_4                4                117
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA1549 MUTATED        8     20      5
  KIAA1549 WILD-TYPE    151    231    160
D1014V7, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                8                151
  CLUS_2               20                231
  CLUS_3                5                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1549 MUTATED        3     12     13      3      2
  KIAA1549 WILD-TYPE    115    119    138     91     79
D1014V8, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                3                115
  CLUS_2               12                119
  CLUS_3               13                138
  CLUS_4                3                 91
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1549 MUTATED        6      7      4      3      7
  KIAA1549 WILD-TYPE    112    129    111     37     64
D1014V9, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                6                112
  CLUS_2                7                129
  CLUS_3                4                111
  CLUS_4                3                 37
  CLUS_5                7                 64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA1549 MUTATED        2     10     12      1      2
  KIAA1549 WILD-TYPE     46     99    118    100     90
D1014V10, multiclass
        clus
vv       KIAA1549 MUTATED KIAA1549 WILD-TYPE
  CLUS_1                2                 46
  CLUS_2               10                 99
  CLUS_3               12                118
  CLUS_4                1                100
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1015) Variable = COL4A3BP MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL4A3BP MUTATED        1      2      0      3
  COL4A3BP WILD-TYPE    134     90    172    173
D1015V1, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                 90
  CLUS_3                0                172
  CLUS_4                3                173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  COL4A3BP MUTATED        3      1      1
  COL4A3BP WILD-TYPE    212    154    161
D1015V2, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                3                212
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL4A3BP MUTATED        1      2      1      0
  COL4A3BP WILD-TYPE    134    122    124     60
D1015V3, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                1                134
  CLUS_2                2                122
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  COL4A3BP MUTATED        2      2      0
  COL4A3BP WILD-TYPE    251    100     89
D1015V4, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                2                251
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  COL4A3BP MUTATED        0      4      1
  COL4A3BP WILD-TYPE    164    243    142
D1015V5, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                0                164
  CLUS_2                4                243
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL4A3BP MUTATED        0      2      3      0      0
  COL4A3BP WILD-TYPE    121    102     88    121    117
D1015V6, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                3                 88
  CLUS_4                0                121
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  COL4A3BP MUTATED        0      6      0
  COL4A3BP WILD-TYPE    159    245    165
D1015V7, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                0                159
  CLUS_2                6                245
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL4A3BP MUTATED        2      2      2      0      0
  COL4A3BP WILD-TYPE    116    129    149     94     81
D1015V8, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                2                116
  CLUS_2                2                129
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL4A3BP MUTATED        0      3      0      0      1
  COL4A3BP WILD-TYPE    118    133    115     40     70
D1015V9, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                133
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL4A3BP MUTATED        0      3      1      0      0
  COL4A3BP WILD-TYPE     48    106    129    101     92
D1015V10, multiclass
        clus
vv       COL4A3BP MUTATED COL4A3BP WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                3                106
  CLUS_3                1                129
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1016) Variable = HCRTR1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HCRTR1 MUTATED        0      1      0      5
  HCRTR1 WILD-TYPE    135     91    172    171
D1016V1, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR1 MUTATED        3      0      1
  HCRTR1 WILD-TYPE    212    155    161
D1016V2, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HCRTR1 MUTATED        1      2      1      0
  HCRTR1 WILD-TYPE    134    122    124     60
D1016V3, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR1 MUTATED        1      3      0
  HCRTR1 WILD-TYPE    252     99     89
D1016V4, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              1              252
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR1 MUTATED        1      2      3
  HCRTR1 WILD-TYPE    163    245    140
D1016V5, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              2              245
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR1 MUTATED        0      1      2      0      3
  HCRTR1 WILD-TYPE    121    103     89    121    114
D1016V6, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HCRTR1 MUTATED        0      3      3
  HCRTR1 WILD-TYPE    159    248    162
D1016V7, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              3              248
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR1 MUTATED        2      1      3      0      0
  HCRTR1 WILD-TYPE    116    130    148     94     81
D1016V8, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              1              130
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR1 MUTATED        0      1      2      0      1
  HCRTR1 WILD-TYPE    118    135    113     40     70
D1016V9, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HCRTR1 MUTATED        0      1      1      2      0
  HCRTR1 WILD-TYPE     48    108    129     99     92
D1016V10, multiclass
        clus
vv       HCRTR1 MUTATED HCRTR1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              1              129
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1017) Variable = DHRS9 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DHRS9 MUTATED        3      1      2      4
  DHRS9 WILD-TYPE    132     91    170    172
D1017V1, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DHRS9 MUTATED        5      0      1
  DHRS9 WILD-TYPE    210    155    161
D1017V2, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DHRS9 MUTATED        3      2      1      3
  DHRS9 WILD-TYPE    132    122    124     57
D1017V3, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DHRS9 MUTATED        6      3      0
  DHRS9 WILD-TYPE    247     99     89
D1017V4, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DHRS9 MUTATED        0      7      3
  DHRS9 WILD-TYPE    164    240    140
D1017V5, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHRS9 MUTATED        0      1      6      0      3
  DHRS9 WILD-TYPE    121    103     85    121    114
D1017V6, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DHRS9 MUTATED        1      8      1
  DHRS9 WILD-TYPE    158    243    164
D1017V7, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHRS9 MUTATED        0      4      6      0      0
  DHRS9 WILD-TYPE    118    127    145     94     81
D1017V8, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHRS9 MUTATED        0      2      0      1      2
  DHRS9 WILD-TYPE    118    134    115     39     69
D1017V9, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DHRS9 MUTATED        0      3      1      1      0
  DHRS9 WILD-TYPE     48    106    129    100     92
D1017V10, multiclass
        clus
vv       DHRS9 MUTATED DHRS9 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1018) Variable = MBD3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBD3 MUTATED        2      0      1     10
  MBD3 WILD-TYPE    133     92    171    166
D1018V1, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD3 MUTATED        9      1      2
  MBD3 WILD-TYPE    206    154    160
D1018V2, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MBD3 MUTATED        5      1      1      1
  MBD3 WILD-TYPE    130    123    124     59
D1018V3, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            1            123
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD3 MUTATED        5      1      2
  MBD3 WILD-TYPE    248    101     87
D1018V4, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD3 MUTATED        2      6      6
  MBD3 WILD-TYPE    162    241    137
D1018V5, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            6            241
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD3 MUTATED        2      2      7      0      3
  MBD3 WILD-TYPE    119    102     84    121    114
D1018V6, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MBD3 MUTATED        3      9      2
  MBD3 WILD-TYPE    156    242    163
D1018V7, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD3 MUTATED        2      5      7      0      0
  MBD3 WILD-TYPE    116    126    144     94     81
D1018V8, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            7            144
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD3 MUTATED        1      5      0      1      3
  MBD3 WILD-TYPE    117    131    115     39     68
D1018V9, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MBD3 MUTATED        1      3      6      0      0
  MBD3 WILD-TYPE     47    106    124    101     92
D1018V10, multiclass
        clus
vv       MBD3 MUTATED MBD3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1019) Variable = ERI1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERI1 MUTATED        1      1      1      1
  ERI1 WILD-TYPE    134     91    171    175
D1019V1, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            1            175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERI1 MUTATED        0      0      2
  ERI1 WILD-TYPE    215    155    160
D1019V2, multiclass
[1] "Remove cluster labels:" "ERI1 MUTATED"          
clus
  ERI1 MUTATED ERI1 WILD-TYPE 
             2            530 
    TCGA-2H-A9GF     TCGA-2H-A9GG     TCGA-2H-A9GH     TCGA-2H-A9GI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-2H-A9GJ     TCGA-2H-A9GK     TCGA-2H-A9GL     TCGA-2H-A9GM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-2H-A9GN     TCGA-2H-A9GO     TCGA-2H-A9GQ     TCGA-2H-A9GR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-B7-5816     TCGA-B7-5818     TCGA-B7-A5TI     TCGA-B7-A5TJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-B7-A5TK     TCGA-B7-A5TN     TCGA-BR-6452     TCGA-BR-6453 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6454     TCGA-BR-6455     TCGA-BR-6456     TCGA-BR-6457 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6458     TCGA-BR-6563     TCGA-BR-6564     TCGA-BR-6565 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6566     TCGA-BR-6705     TCGA-BR-6706     TCGA-BR-6707 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6709     TCGA-BR-6710     TCGA-BR-6801     TCGA-BR-6802 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6803     TCGA-BR-6852     TCGA-BR-7196     TCGA-BR-7197 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7703     TCGA-BR-7704     TCGA-BR-7707     TCGA-BR-7715 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7716     TCGA-BR-7717     TCGA-BR-7722     TCGA-BR-7723 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7851     TCGA-BR-7901     TCGA-BR-7957     TCGA-BR-7958 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7959     TCGA-BR-8058     TCGA-BR-8059     TCGA-BR-8060 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8077     TCGA-BR-8078     TCGA-BR-8080     TCGA-BR-8081 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8284     TCGA-BR-8285     TCGA-BR-8286     TCGA-BR-8289 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8291     TCGA-BR-8295     TCGA-BR-8297     TCGA-BR-8360 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8361     TCGA-BR-8363     TCGA-BR-8364     TCGA-BR-8365 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8366     TCGA-BR-8367     TCGA-BR-8368     TCGA-BR-8369 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8370     TCGA-BR-8371     TCGA-BR-8372     TCGA-BR-8373 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8380     TCGA-BR-8381     TCGA-BR-8382     TCGA-BR-8384 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8483     TCGA-BR-8484     TCGA-BR-8485     TCGA-BR-8486 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8487     TCGA-BR-8588     TCGA-BR-8589     TCGA-BR-8590 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8591     TCGA-BR-8592     TCGA-BR-8676     TCGA-BR-8677 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8678     TCGA-BR-8679     TCGA-BR-8680     TCGA-BR-8682 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8683     TCGA-BR-8686     TCGA-BR-8687     TCGA-BR-8690 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A44T     TCGA-BR-A44U     TCGA-BR-A452     TCGA-BR-A453 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4CQ     TCGA-BR-A4CR     TCGA-BR-A4CS     TCGA-BR-A4IU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4IV     TCGA-BR-A4IY     TCGA-BR-A4IZ     TCGA-BR-A4J1 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4J2     TCGA-BR-A4J4     TCGA-BR-A4J5     TCGA-BR-A4J6 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4J7     TCGA-BR-A4J8     TCGA-BR-A4PD     TCGA-BR-A4PE 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4PF     TCGA-BR-A4QI     TCGA-BR-A4QL     TCGA-BR-A4QM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-5798     TCGA-CD-5799     TCGA-CD-5800     TCGA-CD-5801 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-5802     TCGA-CD-5803     TCGA-CD-5804     TCGA-CD-5813 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8524     TCGA-CD-8525     TCGA-CD-8526     TCGA-CD-8527 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8528     TCGA-CD-8529     TCGA-CD-8530     TCGA-CD-8531 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8532     TCGA-CD-8533     TCGA-CD-8534     TCGA-CD-8535 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8536     TCGA-CD-A486     TCGA-CD-A487     TCGA-CD-A489 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-A48A     TCGA-CD-A48C     TCGA-CD-A4MG     TCGA-CD-A4MH 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-A4MI     TCGA-CD-A4MJ     TCGA-CG-4437     TCGA-CG-4441 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5716     TCGA-CG-5717     TCGA-CG-5718     TCGA-CG-5719 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5720     TCGA-CG-5721     TCGA-CG-5722     TCGA-CG-5723 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5724     TCGA-CG-5725     TCGA-CG-5726     TCGA-CG-5727 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5728     TCGA-CG-5730     TCGA-CG-5732     TCGA-CG-5733 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5734     TCGA-D7-5577     TCGA-D7-5578     TCGA-D7-5579 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6518     TCGA-D7-6519     TCGA-D7-6520     TCGA-D7-6521 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6522     TCGA-D7-6524     TCGA-D7-6525     TCGA-D7-6526 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6527     TCGA-D7-6528     TCGA-D7-6815     TCGA-D7-6817 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6818     TCGA-D7-6820     TCGA-D7-6822     TCGA-D7-8570 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-8572     TCGA-D7-8573     TCGA-D7-8574     TCGA-D7-8575 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-8576     TCGA-D7-8578     TCGA-D7-8579     TCGA-D7-A4YT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A4YU     TCGA-D7-A4YV     TCGA-D7-A4YX     TCGA-D7-A4YY 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A4Z0     TCGA-D7-A6ET     TCGA-D7-A6EV     TCGA-D7-A6EX 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A6EY     TCGA-D7-A6EZ     TCGA-D7-A6F0     TCGA-D7-A6F2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A747     TCGA-D7-A748     TCGA-D7-A74A     TCGA-D7-A74B 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-EQ-5647     TCGA-EQ-8122     TCGA-EQ-A4SO     TCGA-F1-6177 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-F1-6874     TCGA-F1-6875     TCGA-F1-A448     TCGA-F1-A72C 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-7735     TCGA-FP-7829     TCGA-FP-7916     TCGA-FP-7998 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-8099     TCGA-FP-8209     TCGA-FP-8210     TCGA-FP-8211 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-8631     TCGA-FP-A4BE     TCGA-FP-A4BF     TCGA-FP-A8CX 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-A9TM     TCGA-HF-7131     TCGA-HF-7132     TCGA-HF-7133 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HF-7134     TCGA-HF-7136     TCGA-HF-A5NB     TCGA-HJ-7597 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-8238     TCGA-HU-8243     TCGA-HU-8244     TCGA-HU-8249 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-8602     TCGA-HU-8604     TCGA-HU-8608     TCGA-HU-8610 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4G2     TCGA-HU-A4G3     TCGA-HU-A4G6     TCGA-HU-A4G8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4G9     TCGA-HU-A4GC     TCGA-HU-A4GD     TCGA-HU-A4GF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GH     TCGA-HU-A4GJ     TCGA-HU-A4GN     TCGA-HU-A4GP 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GQ     TCGA-HU-A4GT     TCGA-HU-A4GU     TCGA-HU-A4GX 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GY     TCGA-HU-A4H0     TCGA-HU-A4H2     TCGA-HU-A4H3 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4H4     TCGA-HU-A4H5     TCGA-HU-A4H6     TCGA-HU-A4H8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4HB     TCGA-HU-A4HD     TCGA-IC-A6RE     TCGA-IC-A6RF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A3I8     TCGA-IG-A3QL     TCGA-IG-A3Y9     TCGA-IG-A3YA 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A3YB     TCGA-IG-A3YC     TCGA-IG-A4P3     TCGA-IG-A4QS 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A4QT     TCGA-IG-A50L     TCGA-IG-A51D     TCGA-IG-A5B8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A5S3     TCGA-IG-A625     TCGA-IG-A6QS     TCGA-IG-A7DP 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A8O2     TCGA-IG-A97H     TCGA-IG-A97I     TCGA-IN-7806 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-7808     TCGA-IN-8462     TCGA-IN-8663     TCGA-IN-A6RI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A6RJ     TCGA-IN-A6RL     TCGA-IN-A6RN     TCGA-IN-A6RO 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A6RP     TCGA-IN-A6RR     TCGA-IN-A6RS     TCGA-IN-A7NR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A7NT     TCGA-IN-A7NU     TCGA-IN-AB1V     TCGA-IN-AB1X 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IP-7968     TCGA-JY-A6F8     TCGA-JY-A6FA     TCGA-JY-A6FB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A6FD     TCGA-JY-A6FE     TCGA-JY-A6FG     TCGA-JY-A6FH 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A938     TCGA-JY-A939     TCGA-JY-A93C     TCGA-JY-A93D 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A93E     TCGA-JY-A93F     TCGA-KB-A6F5     TCGA-KB-A6F7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-KB-A93G     TCGA-KB-A93J     TCGA-KH-A6WC     TCGA-L5-A43C 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A43E     TCGA-L5-A43H     TCGA-L5-A43I     TCGA-L5-A43J 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A43M     TCGA-L5-A4OE     TCGA-L5-A4OF     TCGA-L5-A4OG 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OH     TCGA-L5-A4OI     TCGA-L5-A4OJ     TCGA-L5-A4OM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4ON     TCGA-L5-A4OO     TCGA-L5-A4OP     TCGA-L5-A4OQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OR     TCGA-L5-A4OS     TCGA-L5-A4OT     TCGA-L5-A4OU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OW     TCGA-L5-A4OX     TCGA-L5-A88S     TCGA-L5-A88T 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A88V     TCGA-L5-A88W     TCGA-L5-A88Y     TCGA-L5-A88Z 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A891     TCGA-L5-A893     TCGA-L5-A8NE     TCGA-L5-A8NF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NG     TCGA-L5-A8NH     TCGA-L5-A8NI     TCGA-L5-A8NJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NK     TCGA-L5-A8NL     TCGA-L5-A8NM     TCGA-L5-A8NN 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NQ     TCGA-L5-A8NR     TCGA-L5-A8NS     TCGA-L5-A8NT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NU     TCGA-L5-A8NV     TCGA-L5-A8NW     TCGA-L7-A56G 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L7-A6VZ     TCGA-LN-A49K     TCGA-LN-A49L     TCGA-LN-A49M 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49N     TCGA-LN-A49O     TCGA-LN-A49P     TCGA-LN-A49R 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49S     TCGA-LN-A49U     TCGA-LN-A49V     TCGA-LN-A49W 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49X     TCGA-LN-A49Y     TCGA-LN-A4A1     TCGA-LN-A4A2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A4A3     TCGA-LN-A4A4     TCGA-LN-A4A5     TCGA-LN-A4A6 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A4A8     TCGA-LN-A4A9     TCGA-LN-A4MQ     TCGA-LN-A4MR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A5U5     TCGA-LN-A5U6     TCGA-LN-A5U7     TCGA-LN-A7HV 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A7HW     TCGA-LN-A7HX     TCGA-LN-A7HY     TCGA-LN-A7HZ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A8HZ     TCGA-LN-A8I0     TCGA-LN-A8I1     TCGA-LN-A9FO 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A9FP     TCGA-LN-A9FQ     TCGA-LN-A9FR     TCGA-M9-A5M8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-MX-A5UG     TCGA-MX-A5UJ     TCGA-MX-A663     TCGA-MX-A666 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-Q9-A6FU     TCGA-Q9-A6FW     TCGA-R5-A7O7     TCGA-R5-A7ZE 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R5-A7ZF     TCGA-R5-A7ZI     TCGA-R5-A7ZR     TCGA-R5-A804 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R5-A805     TCGA-R6-A6DN     TCGA-R6-A6DQ     TCGA-R6-A6KZ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6L4     TCGA-R6-A6L6     TCGA-R6-A6XG     TCGA-R6-A6XQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6Y0     TCGA-R6-A6Y2     TCGA-R6-A8W5     TCGA-R6-A8W8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A8WC     TCGA-R6-A8WG     TCGA-RD-A7BS     TCGA-RD-A7BT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A7BW     TCGA-RD-A7C1     TCGA-RD-A8MV     TCGA-RD-A8MW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A8N0     TCGA-RD-A8N1     TCGA-RD-A8N2     TCGA-RD-A8N4 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A8N5     TCGA-RD-A8N6     TCGA-RD-A8N9     TCGA-RE-A7BO 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-S8-A6BV     TCGA-S8-A6BW     TCGA-SW-A7EA     TCGA-SW-A7EB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-V5-A7RB     TCGA-V5-A7RC     TCGA-V5-A7RE     TCGA-V5-AASV 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-V5-AASW     TCGA-V5-AASX     TCGA-VQ-A8DT     TCGA-VQ-A8DU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8DV     TCGA-VQ-A8DZ     TCGA-VQ-A8E2     TCGA-VQ-A8E7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8P2     TCGA-VQ-A8P3     TCGA-VQ-A8PE     TCGA-VQ-A8PK 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8PM     TCGA-VQ-A8PQ     TCGA-VQ-A91Q     TCGA-VQ-A91U 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A91V     TCGA-VQ-A92D     TCGA-VQ-A94T     TCGA-VQ-AA64 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA68     TCGA-VQ-AA69     TCGA-VQ-AA6A     TCGA-VQ-AA6B 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA6F     TCGA-VQ-AA6G     TCGA-VQ-AA6I     TCGA-VQ-AA6J 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA6K     TCGA-VR-A8EO     TCGA-VR-A8EP     TCGA-VR-A8EQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-A8ER     TCGA-VR-A8ET     TCGA-VR-A8EU     TCGA-VR-A8EW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-A8EX     TCGA-VR-A8EY     TCGA-VR-A8EZ     TCGA-VR-A8Q7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-AA4D     TCGA-VR-AA4G     TCGA-VR-AA7B     TCGA-VR-AA7D 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-AA7I     TCGA-X8-AAAR     TCGA-XP-A8T6     TCGA-XP-A8T7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-XP-A8T8     TCGA-Z6-A8JD     TCGA-Z6-A8JE     TCGA-Z6-A9VB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-Z6-AAPN     TCGA-ZR-A9CJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ERI1 MUTATED        0      1      0      3
  ERI1 WILD-TYPE    135    123    125     57
D1019V3, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            3             57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERI1 MUTATED        1      3      0
  ERI1 WILD-TYPE    252     99     89
D1019V4, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERI1 MUTATED        1      1      1
  ERI1 WILD-TYPE    163    246    142
D1019V5, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            1            246
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERI1 MUTATED        0      0      1      1      1
  ERI1 WILD-TYPE    121    104     90    120    116
D1019V6, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            1             90
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ERI1 MUTATED        0      2      2
  ERI1 WILD-TYPE    159    249    163
D1019V7, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            2            249
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERI1 MUTATED        0      1      2      0      1
  ERI1 WILD-TYPE    118    130    149     94     80
D1019V8, multiclass
        clus
vv       ERI1 MUTATED ERI1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            130
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERI1 MUTATED        0      1      1      0      0
  ERI1 WILD-TYPE    118    135    114     40     71
D1019V9, multiclass
[1] "Remove cluster labels:" "ERI1 MUTATED"          
clus
  ERI1 MUTATED ERI1 WILD-TYPE 
             2            478 
    TCGA-2H-A9GF     TCGA-2H-A9GG     TCGA-2H-A9GH     TCGA-2H-A9GI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-2H-A9GJ     TCGA-2H-A9GK     TCGA-2H-A9GL     TCGA-2H-A9GM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-2H-A9GN     TCGA-2H-A9GO     TCGA-2H-A9GQ     TCGA-2H-A9GR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-B7-5816     TCGA-B7-5818     TCGA-B7-A5TI     TCGA-B7-A5TJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-B7-A5TK     TCGA-B7-A5TN     TCGA-BR-6452     TCGA-BR-6453 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6454     TCGA-BR-6455     TCGA-BR-6456     TCGA-BR-6457 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6458     TCGA-BR-6563     TCGA-BR-6564     TCGA-BR-6565 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6566     TCGA-BR-6705     TCGA-BR-6706     TCGA-BR-6707 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6709     TCGA-BR-6710     TCGA-BR-6801     TCGA-BR-6802 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6803     TCGA-BR-6852     TCGA-BR-7196     TCGA-BR-7197 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7703     TCGA-BR-7704     TCGA-BR-7707     TCGA-BR-7715 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7717     TCGA-BR-7723     TCGA-BR-7851     TCGA-BR-7901 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7957     TCGA-BR-7958     TCGA-BR-7959     TCGA-BR-8058 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8059     TCGA-BR-8060     TCGA-BR-8077     TCGA-BR-8078 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8080     TCGA-BR-8284     TCGA-BR-8286     TCGA-BR-8289 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8291     TCGA-BR-8295     TCGA-BR-8297     TCGA-BR-8360 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8361     TCGA-BR-8363     TCGA-BR-8364     TCGA-BR-8365 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8368     TCGA-BR-8369     TCGA-BR-8370     TCGA-BR-8371 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8372     TCGA-BR-8373     TCGA-BR-8380     TCGA-BR-8381 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8382     TCGA-BR-8384     TCGA-BR-8483     TCGA-BR-8485 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8486     TCGA-BR-8487     TCGA-BR-8588     TCGA-BR-8590 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8591     TCGA-BR-8592     TCGA-BR-8676     TCGA-BR-8677 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8678     TCGA-BR-8679     TCGA-BR-8680     TCGA-BR-8682 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8683     TCGA-BR-8687     TCGA-BR-8690     TCGA-BR-A44T 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A452     TCGA-BR-A453     TCGA-BR-A4CQ     TCGA-BR-A4CR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4CS     TCGA-BR-A4IU     TCGA-BR-A4IV     TCGA-BR-A4IY 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4IZ     TCGA-BR-A4J1     TCGA-BR-A4J5     TCGA-BR-A4J6 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4J7     TCGA-BR-A4J8     TCGA-BR-A4PD     TCGA-BR-A4QI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4QL     TCGA-BR-A4QM     TCGA-CD-5798     TCGA-CD-5799 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-5800     TCGA-CD-5801     TCGA-CD-5802     TCGA-CD-5803 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-5804     TCGA-CD-5813     TCGA-CD-8524     TCGA-CD-8525 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8526     TCGA-CD-8527     TCGA-CD-8529     TCGA-CD-8530 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8531     TCGA-CD-8532     TCGA-CD-8533     TCGA-CD-8534 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8535     TCGA-CD-8536     TCGA-CD-A486     TCGA-CD-A487 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-A489     TCGA-CD-A48C     TCGA-CD-A4MG     TCGA-CD-A4MH 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-A4MI     TCGA-CG-4437     TCGA-CG-4441     TCGA-CG-4449 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5716     TCGA-CG-5717     TCGA-CG-5718     TCGA-CG-5719 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5720     TCGA-CG-5721     TCGA-CG-5722     TCGA-CG-5723 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5724     TCGA-CG-5725     TCGA-CG-5726     TCGA-CG-5727 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5728     TCGA-CG-5730     TCGA-CG-5732     TCGA-CG-5733 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5734     TCGA-D7-5577     TCGA-D7-5578     TCGA-D7-5579 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6518     TCGA-D7-6519     TCGA-D7-6520     TCGA-D7-6521 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6522     TCGA-D7-6524     TCGA-D7-6525     TCGA-D7-6526 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6527     TCGA-D7-6528     TCGA-D7-6815     TCGA-D7-6817 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6818     TCGA-D7-6820     TCGA-D7-6822     TCGA-D7-8570 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-8572     TCGA-D7-8574     TCGA-D7-8575     TCGA-D7-8576 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-8578     TCGA-D7-8579     TCGA-D7-A4YT     TCGA-D7-A4YU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A4YV     TCGA-D7-A4YY     TCGA-D7-A4Z0     TCGA-D7-A6ET 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A6EV     TCGA-D7-A6EX     TCGA-D7-A6EY     TCGA-D7-A6EZ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A6F0     TCGA-D7-A6F2     TCGA-D7-A747     TCGA-D7-A748 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A74A     TCGA-D7-A74B     TCGA-EQ-5647     TCGA-EQ-8122 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-F1-6177     TCGA-F1-6874     TCGA-F1-6875     TCGA-F1-A448 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-7735     TCGA-FP-7829     TCGA-FP-7998     TCGA-FP-8099 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-8209     TCGA-FP-8210     TCGA-FP-8211     TCGA-FP-8631 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-A4BE     TCGA-FP-A9TM     TCGA-HF-7131     TCGA-HF-7132 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HF-7134     TCGA-HF-7136     TCGA-HU-8238     TCGA-HU-8243 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-8602     TCGA-HU-8604     TCGA-HU-8608     TCGA-HU-A4G3 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4G8     TCGA-HU-A4GC     TCGA-HU-A4GD     TCGA-HU-A4GF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GH     TCGA-HU-A4GJ     TCGA-HU-A4GN     TCGA-HU-A4GQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GT     TCGA-HU-A4GX     TCGA-HU-A4GY     TCGA-HU-A4H2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4H4     TCGA-HU-A4H5     TCGA-HU-A4H6     TCGA-HU-A4H8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4HB     TCGA-IC-A6RE     TCGA-IC-A6RF     TCGA-IG-A3I8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A3QL     TCGA-IG-A3Y9     TCGA-IG-A3YA     TCGA-IG-A3YB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A3YC     TCGA-IG-A4P3     TCGA-IG-A4QS     TCGA-IG-A4QT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A50L     TCGA-IG-A51D     TCGA-IG-A5B8     TCGA-IG-A5S3 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A625     TCGA-IG-A6QS     TCGA-IG-A7DP     TCGA-IG-A8O2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A97H     TCGA-IG-A97I     TCGA-IN-7806     TCGA-IN-7808 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-8462     TCGA-IN-8663     TCGA-IN-A6RI     TCGA-IN-A6RJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A6RL     TCGA-IN-A6RN     TCGA-IN-A6RP     TCGA-IN-A7NR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A7NT     TCGA-IN-A7NU     TCGA-IN-AB1V     TCGA-IN-AB1X 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IP-7968     TCGA-JY-A6F8     TCGA-JY-A6FA     TCGA-JY-A6FB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A6FD     TCGA-JY-A6FE     TCGA-JY-A6FG     TCGA-JY-A6FH 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A938     TCGA-JY-A939     TCGA-JY-A93C     TCGA-JY-A93D 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A93E     TCGA-KB-A6F5     TCGA-KB-A6F7     TCGA-KB-A93J 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-KH-A6WC     TCGA-L5-A43C     TCGA-L5-A43E     TCGA-L5-A43H 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A43I     TCGA-L5-A43J     TCGA-L5-A43M     TCGA-L5-A4OE 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OF     TCGA-L5-A4OG     TCGA-L5-A4OH     TCGA-L5-A4OI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OM     TCGA-L5-A4ON     TCGA-L5-A4OO     TCGA-L5-A4OP 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OQ     TCGA-L5-A4OR     TCGA-L5-A4OS     TCGA-L5-A4OT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OU     TCGA-L5-A4OW     TCGA-L5-A4OX     TCGA-L5-A88S 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A88T     TCGA-L5-A88V     TCGA-L5-A88W     TCGA-L5-A88Y 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A88Z     TCGA-L5-A891     TCGA-L5-A893     TCGA-L5-A8NE 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NF     TCGA-L5-A8NG     TCGA-L5-A8NH     TCGA-L5-A8NI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NJ     TCGA-L5-A8NK     TCGA-L5-A8NL     TCGA-L5-A8NM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NN     TCGA-L5-A8NQ     TCGA-L5-A8NR     TCGA-L5-A8NS 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NT     TCGA-L5-A8NU     TCGA-L5-A8NV     TCGA-L5-A8NW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L7-A56G     TCGA-L7-A6VZ     TCGA-LN-A49K     TCGA-LN-A49L 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49M     TCGA-LN-A49N     TCGA-LN-A49O     TCGA-LN-A49P 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49R     TCGA-LN-A49S     TCGA-LN-A49U     TCGA-LN-A49W 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49X     TCGA-LN-A49Y     TCGA-LN-A4A1     TCGA-LN-A4A2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A4A4     TCGA-LN-A4A5     TCGA-LN-A4A6     TCGA-LN-A4A8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A4A9     TCGA-LN-A4MQ     TCGA-LN-A4MR     TCGA-LN-A5U5 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A5U6     TCGA-LN-A5U7     TCGA-LN-A7HV     TCGA-LN-A7HW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A7HX     TCGA-LN-A7HY     TCGA-LN-A7HZ     TCGA-LN-A8HZ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A8I0     TCGA-LN-A8I1     TCGA-LN-A9FO     TCGA-LN-A9FP 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A9FQ     TCGA-LN-A9FR     TCGA-M9-A5M8     TCGA-MX-A5UG 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-MX-A5UJ     TCGA-MX-A663     TCGA-MX-A666     TCGA-Q9-A6FU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-Q9-A6FW     TCGA-R5-A7O7     TCGA-R5-A7ZE     TCGA-R5-A7ZF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R5-A7ZI     TCGA-R5-A7ZR     TCGA-R5-A804     TCGA-R5-A805 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6DN     TCGA-R6-A6DQ     TCGA-R6-A6KZ     TCGA-R6-A6L4 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6L6     TCGA-R6-A6XG     TCGA-R6-A6XQ     TCGA-R6-A6Y0 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6Y2     TCGA-R6-A8W5     TCGA-R6-A8W8     TCGA-R6-A8WG 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A7BS     TCGA-RD-A7BW     TCGA-RD-A7C1     TCGA-RD-A8MV 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A8MW     TCGA-RD-A8N0     TCGA-RD-A8N1     TCGA-RD-A8N5 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A8N6     TCGA-RD-A8N9     TCGA-RE-A7BO     TCGA-S8-A6BV 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-S8-A6BW     TCGA-SW-A7EA     TCGA-SW-A7EB     TCGA-V5-A7RB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-V5-A7RC     TCGA-V5-A7RE     TCGA-V5-AASW     TCGA-V5-AASX 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8DU     TCGA-VQ-A8DV     TCGA-VQ-A8E2     TCGA-VQ-A8E7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8P2     TCGA-VQ-A8P3     TCGA-VQ-A8PE     TCGA-VQ-A8PK 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8PM     TCGA-VQ-A8PQ     TCGA-VQ-A91Q     TCGA-VQ-A91U 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A91V     TCGA-VQ-A92D     TCGA-VQ-A94T     TCGA-VQ-AA64 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA68     TCGA-VQ-AA69     TCGA-VQ-AA6A     TCGA-VQ-AA6B 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA6F     TCGA-VQ-AA6G     TCGA-VQ-AA6I     TCGA-VQ-AA6J 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA6K     TCGA-VR-A8EO     TCGA-VR-A8EP     TCGA-VR-A8EQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-A8ER     TCGA-VR-A8ET     TCGA-VR-A8EU     TCGA-VR-A8EW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-A8EX     TCGA-VR-A8EY     TCGA-VR-A8EZ     TCGA-VR-A8Q7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-AA4D     TCGA-VR-AA4G     TCGA-VR-AA7B     TCGA-VR-AA7D 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-AA7I     TCGA-X8-AAAR     TCGA-XP-A8T6     TCGA-XP-A8T7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-XP-A8T8     TCGA-Z6-A8JD     TCGA-Z6-A8JE     TCGA-Z6-A9VB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-Z6-AAPN     TCGA-ZR-A9CJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ERI1 MUTATED        0      1      0      1      0
  ERI1 WILD-TYPE     48    108    130    100     92
D1019V10, multiclass
[1] "Remove cluster labels:" "ERI1 MUTATED"          
clus
  ERI1 MUTATED ERI1 WILD-TYPE 
             2            478 
    TCGA-2H-A9GF     TCGA-2H-A9GG     TCGA-2H-A9GH     TCGA-2H-A9GI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-2H-A9GJ     TCGA-2H-A9GK     TCGA-2H-A9GL     TCGA-2H-A9GM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-2H-A9GN     TCGA-2H-A9GO     TCGA-2H-A9GQ     TCGA-2H-A9GR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-B7-5816     TCGA-B7-5818     TCGA-B7-A5TI     TCGA-B7-A5TJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-B7-A5TK     TCGA-B7-A5TN     TCGA-BR-6452     TCGA-BR-6453 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6454     TCGA-BR-6455     TCGA-BR-6456     TCGA-BR-6457 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6458     TCGA-BR-6563     TCGA-BR-6564     TCGA-BR-6565 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6566     TCGA-BR-6705     TCGA-BR-6706     TCGA-BR-6707 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6709     TCGA-BR-6710     TCGA-BR-6801     TCGA-BR-6802 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-6803     TCGA-BR-6852     TCGA-BR-7196     TCGA-BR-7197 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7703     TCGA-BR-7704     TCGA-BR-7707     TCGA-BR-7715 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7717     TCGA-BR-7723     TCGA-BR-7851     TCGA-BR-7901 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-7957     TCGA-BR-7958     TCGA-BR-7959     TCGA-BR-8058 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8059     TCGA-BR-8060     TCGA-BR-8077     TCGA-BR-8078 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8080     TCGA-BR-8284     TCGA-BR-8286     TCGA-BR-8289 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8291     TCGA-BR-8295     TCGA-BR-8297     TCGA-BR-8360 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8361     TCGA-BR-8363     TCGA-BR-8364     TCGA-BR-8365 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8368     TCGA-BR-8369     TCGA-BR-8370     TCGA-BR-8371 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8372     TCGA-BR-8373     TCGA-BR-8380     TCGA-BR-8381 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8382     TCGA-BR-8384     TCGA-BR-8483     TCGA-BR-8485 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8486     TCGA-BR-8487     TCGA-BR-8588     TCGA-BR-8590 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8591     TCGA-BR-8592     TCGA-BR-8676     TCGA-BR-8677 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8678     TCGA-BR-8679     TCGA-BR-8680     TCGA-BR-8682 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-8683     TCGA-BR-8687     TCGA-BR-8690     TCGA-BR-A44T 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A452     TCGA-BR-A453     TCGA-BR-A4CQ     TCGA-BR-A4CR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4CS     TCGA-BR-A4IU     TCGA-BR-A4IV     TCGA-BR-A4IY 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4IZ     TCGA-BR-A4J1     TCGA-BR-A4J5     TCGA-BR-A4J6 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4J7     TCGA-BR-A4J8     TCGA-BR-A4PD     TCGA-BR-A4QI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-BR-A4QL     TCGA-BR-A4QM     TCGA-CD-5798     TCGA-CD-5799 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-5800     TCGA-CD-5801     TCGA-CD-5802     TCGA-CD-5803 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-5804     TCGA-CD-5813     TCGA-CD-8524     TCGA-CD-8525 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8526     TCGA-CD-8527     TCGA-CD-8529     TCGA-CD-8530 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8531     TCGA-CD-8532     TCGA-CD-8533     TCGA-CD-8534 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-8535     TCGA-CD-8536     TCGA-CD-A486     TCGA-CD-A487 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-A489     TCGA-CD-A48C     TCGA-CD-A4MG     TCGA-CD-A4MH 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CD-A4MI     TCGA-CG-4437     TCGA-CG-4441     TCGA-CG-4449 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5716     TCGA-CG-5717     TCGA-CG-5718     TCGA-CG-5719 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5720     TCGA-CG-5721     TCGA-CG-5722     TCGA-CG-5723 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5724     TCGA-CG-5725     TCGA-CG-5726     TCGA-CG-5727 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5728     TCGA-CG-5730     TCGA-CG-5732     TCGA-CG-5733 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-CG-5734     TCGA-D7-5577     TCGA-D7-5578     TCGA-D7-5579 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6518     TCGA-D7-6519     TCGA-D7-6520     TCGA-D7-6521 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6522     TCGA-D7-6524     TCGA-D7-6525     TCGA-D7-6526 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6527     TCGA-D7-6528     TCGA-D7-6815     TCGA-D7-6817 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-6818     TCGA-D7-6820     TCGA-D7-6822     TCGA-D7-8570 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-8572     TCGA-D7-8574     TCGA-D7-8575     TCGA-D7-8576 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-8578     TCGA-D7-8579     TCGA-D7-A4YT     TCGA-D7-A4YU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A4YV     TCGA-D7-A4YY     TCGA-D7-A4Z0     TCGA-D7-A6ET 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A6EV     TCGA-D7-A6EX     TCGA-D7-A6EY     TCGA-D7-A6EZ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A6F0     TCGA-D7-A6F2     TCGA-D7-A747     TCGA-D7-A748 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-D7-A74A     TCGA-D7-A74B     TCGA-EQ-5647     TCGA-EQ-8122 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-F1-6177     TCGA-F1-6874     TCGA-F1-6875     TCGA-F1-A448 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-7735     TCGA-FP-7829     TCGA-FP-7998     TCGA-FP-8099 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-8209     TCGA-FP-8210     TCGA-FP-8211     TCGA-FP-8631 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-FP-A4BE     TCGA-FP-A9TM     TCGA-HF-7131     TCGA-HF-7132 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HF-7134     TCGA-HF-7136     TCGA-HU-8238     TCGA-HU-8243 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-8602     TCGA-HU-8604     TCGA-HU-8608     TCGA-HU-A4G3 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4G8     TCGA-HU-A4GC     TCGA-HU-A4GD     TCGA-HU-A4GF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GH     TCGA-HU-A4GJ     TCGA-HU-A4GN     TCGA-HU-A4GQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4GT     TCGA-HU-A4GX     TCGA-HU-A4GY     TCGA-HU-A4H2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4H4     TCGA-HU-A4H5     TCGA-HU-A4H6     TCGA-HU-A4H8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-HU-A4HB     TCGA-IC-A6RE     TCGA-IC-A6RF     TCGA-IG-A3I8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A3QL     TCGA-IG-A3Y9     TCGA-IG-A3YA     TCGA-IG-A3YB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A3YC     TCGA-IG-A4P3     TCGA-IG-A4QS     TCGA-IG-A4QT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A50L     TCGA-IG-A51D     TCGA-IG-A5B8     TCGA-IG-A5S3 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A625     TCGA-IG-A6QS     TCGA-IG-A7DP     TCGA-IG-A8O2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IG-A97H     TCGA-IG-A97I     TCGA-IN-7806     TCGA-IN-7808 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-8462     TCGA-IN-8663     TCGA-IN-A6RI     TCGA-IN-A6RJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A6RL     TCGA-IN-A6RN     TCGA-IN-A6RP     TCGA-IN-A7NR 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IN-A7NT     TCGA-IN-A7NU     TCGA-IN-AB1V     TCGA-IN-AB1X 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-IP-7968     TCGA-JY-A6F8     TCGA-JY-A6FA     TCGA-JY-A6FB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A6FD     TCGA-JY-A6FE     TCGA-JY-A6FG     TCGA-JY-A6FH 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A938     TCGA-JY-A939     TCGA-JY-A93C     TCGA-JY-A93D 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-JY-A93E     TCGA-KB-A6F5     TCGA-KB-A6F7     TCGA-KB-A93J 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-KH-A6WC     TCGA-L5-A43C     TCGA-L5-A43E     TCGA-L5-A43H 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A43I     TCGA-L5-A43J     TCGA-L5-A43M     TCGA-L5-A4OE 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OF     TCGA-L5-A4OG     TCGA-L5-A4OH     TCGA-L5-A4OI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OM     TCGA-L5-A4ON     TCGA-L5-A4OO     TCGA-L5-A4OP 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OQ     TCGA-L5-A4OR     TCGA-L5-A4OS     TCGA-L5-A4OT 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A4OU     TCGA-L5-A4OW     TCGA-L5-A4OX     TCGA-L5-A88S 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A88T     TCGA-L5-A88V     TCGA-L5-A88W     TCGA-L5-A88Y 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A88Z     TCGA-L5-A891     TCGA-L5-A893     TCGA-L5-A8NE 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NF     TCGA-L5-A8NG     TCGA-L5-A8NH     TCGA-L5-A8NI 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NJ     TCGA-L5-A8NK     TCGA-L5-A8NL     TCGA-L5-A8NM 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NN     TCGA-L5-A8NQ     TCGA-L5-A8NR     TCGA-L5-A8NS 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L5-A8NT     TCGA-L5-A8NU     TCGA-L5-A8NV     TCGA-L5-A8NW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-L7-A56G     TCGA-L7-A6VZ     TCGA-LN-A49K     TCGA-LN-A49L 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49M     TCGA-LN-A49N     TCGA-LN-A49O     TCGA-LN-A49P 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49R     TCGA-LN-A49S     TCGA-LN-A49U     TCGA-LN-A49W 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A49X     TCGA-LN-A49Y     TCGA-LN-A4A1     TCGA-LN-A4A2 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A4A4     TCGA-LN-A4A5     TCGA-LN-A4A6     TCGA-LN-A4A8 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A4A9     TCGA-LN-A4MQ     TCGA-LN-A4MR     TCGA-LN-A5U5 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A5U6     TCGA-LN-A5U7     TCGA-LN-A7HV     TCGA-LN-A7HW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A7HX     TCGA-LN-A7HY     TCGA-LN-A7HZ     TCGA-LN-A8HZ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A8I0     TCGA-LN-A8I1     TCGA-LN-A9FO     TCGA-LN-A9FP 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-LN-A9FQ     TCGA-LN-A9FR     TCGA-M9-A5M8     TCGA-MX-A5UG 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-MX-A5UJ     TCGA-MX-A663     TCGA-MX-A666     TCGA-Q9-A6FU 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-Q9-A6FW     TCGA-R5-A7O7     TCGA-R5-A7ZE     TCGA-R5-A7ZF 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R5-A7ZI     TCGA-R5-A7ZR     TCGA-R5-A804     TCGA-R5-A805 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6DN     TCGA-R6-A6DQ     TCGA-R6-A6KZ     TCGA-R6-A6L4 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6L6     TCGA-R6-A6XG     TCGA-R6-A6XQ     TCGA-R6-A6Y0 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-R6-A6Y2     TCGA-R6-A8W5     TCGA-R6-A8W8     TCGA-R6-A8WG 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A7BS     TCGA-RD-A7BW     TCGA-RD-A7C1     TCGA-RD-A8MV 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A8MW     TCGA-RD-A8N0     TCGA-RD-A8N1     TCGA-RD-A8N5 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-RD-A8N6     TCGA-RD-A8N9     TCGA-RE-A7BO     TCGA-S8-A6BV 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-S8-A6BW     TCGA-SW-A7EA     TCGA-SW-A7EB     TCGA-V5-A7RB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-V5-A7RC     TCGA-V5-A7RE     TCGA-V5-AASW     TCGA-V5-AASX 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8DU     TCGA-VQ-A8DV     TCGA-VQ-A8E2     TCGA-VQ-A8E7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8P2     TCGA-VQ-A8P3     TCGA-VQ-A8PE     TCGA-VQ-A8PK 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A8PM     TCGA-VQ-A8PQ     TCGA-VQ-A91Q     TCGA-VQ-A91U 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-A91V     TCGA-VQ-A92D     TCGA-VQ-A94T     TCGA-VQ-AA64 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA68     TCGA-VQ-AA69     TCGA-VQ-AA6A     TCGA-VQ-AA6B 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA6F     TCGA-VQ-AA6G     TCGA-VQ-AA6I     TCGA-VQ-AA6J 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VQ-AA6K     TCGA-VR-A8EO     TCGA-VR-A8EP     TCGA-VR-A8EQ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-A8ER     TCGA-VR-A8ET     TCGA-VR-A8EU     TCGA-VR-A8EW 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-A8EX     TCGA-VR-A8EY     TCGA-VR-A8EZ     TCGA-VR-A8Q7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-AA4D     TCGA-VR-AA4G     TCGA-VR-AA7B     TCGA-VR-AA7D 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-VR-AA7I     TCGA-X8-AAAR     TCGA-XP-A8T6     TCGA-XP-A8T7 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-XP-A8T8     TCGA-Z6-A8JD     TCGA-Z6-A8JE     TCGA-Z6-A9VB 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 
    TCGA-Z6-AAPN     TCGA-ZR-A9CJ 
"ERI1 WILD-TYPE" "ERI1 WILD-TYPE" 

Clustering(1020) Variable = POU5F1B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POU5F1B MUTATED        1      2      1      5
  POU5F1B WILD-TYPE    134     90    171    171
D1020V1, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POU5F1B MUTATED        5      3      1
  POU5F1B WILD-TYPE    210    152    161
D1020V2, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               5               210
  CLUS_2               3               152
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  POU5F1B MUTATED        4      3      1      0
  POU5F1B WILD-TYPE    131    121    124     60
D1020V3, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3               121
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POU5F1B MUTATED        5      2      1
  POU5F1B WILD-TYPE    248    100     88
D1020V4, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               5               248
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POU5F1B MUTATED        1      7      1
  POU5F1B WILD-TYPE    163    240    142
D1020V5, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               1               163
  CLUS_2               7               240
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POU5F1B MUTATED        4      1      3      0      1
  POU5F1B WILD-TYPE    117    103     88    121    116
D1020V6, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               4               117
  CLUS_2               1               103
  CLUS_3               3                88
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  POU5F1B MUTATED        1      7      1
  POU5F1B WILD-TYPE    158    244    164
D1020V7, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               1               158
  CLUS_2               7               244
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POU5F1B MUTATED        1      4      2      0      2
  POU5F1B WILD-TYPE    117    127    149     94     79
D1020V8, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               2               149
  CLUS_4               0                94
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POU5F1B MUTATED        0      2      1      1      3
  POU5F1B WILD-TYPE    118    134    114     39     68
D1020V9, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  POU5F1B MUTATED        1      1      4      1      0
  POU5F1B WILD-TYPE     47    108    126    100     92
D1020V10, multiclass
        clus
vv       POU5F1B MUTATED POU5F1B WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               4               126
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1021) Variable = MYCN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYCN MUTATED        0      0      2      6
  MYCN WILD-TYPE    135     92    170    170
D1021V1, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYCN MUTATED        5      1      2
  MYCN WILD-TYPE    210    154    160
D1021V2, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MYCN MUTATED        3      4      1      0
  MYCN WILD-TYPE    132    120    124     60
D1021V3, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            3            132
  CLUS_2            4            120
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYCN MUTATED        5      1      2
  MYCN WILD-TYPE    248    101     87
D1021V4, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYCN MUTATED        2      5      1
  MYCN WILD-TYPE    162    242    142
D1021V5, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCN MUTATED        0      1      4      1      2
  MYCN WILD-TYPE    121    103     87    120    115
D1021V6, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MYCN MUTATED        0      6      2
  MYCN WILD-TYPE    159    245    163
D1021V7, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            0            159
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCN MUTATED        0      4      3      1      0
  MYCN WILD-TYPE    118    127    148     93     81
D1021V8, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCN MUTATED        0      4      1      0      3
  MYCN WILD-TYPE    118    132    114     40     68
D1021V9, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MYCN MUTATED        0      4      3      0      1
  MYCN WILD-TYPE     48    105    127    101     91
D1021V10, multiclass
        clus
vv       MYCN MUTATED MYCN WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1022) Variable = TCN2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCN2 MUTATED        2      1      2      6
  TCN2 WILD-TYPE    133     91    170    170
D1022V1, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCN2 MUTATED        7      4      1
  TCN2 WILD-TYPE    208    151    161
D1022V2, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            4            151
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCN2 MUTATED        3      2      2      0
  TCN2 WILD-TYPE    132    122    123     60
D1022V3, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCN2 MUTATED        3      2      2
  TCN2 WILD-TYPE    250    100     87
D1022V4, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            2            100
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCN2 MUTATED        5      7      0
  TCN2 WILD-TYPE    159    240    143
D1022V5, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            5            159
  CLUS_2            7            240
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCN2 MUTATED        3      3      3      3      0
  TCN2 WILD-TYPE    118    101     88    118    117
D1022V6, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3            3             88
  CLUS_4            3            118
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TCN2 MUTATED        4      7      1
  TCN2 WILD-TYPE    155    244    164
D1022V7, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            4            155
  CLUS_2            7            244
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCN2 MUTATED        1      5      2      4      0
  TCN2 WILD-TYPE    117    126    149     90     81
D1022V8, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            126
  CLUS_3            2            149
  CLUS_4            4             90
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCN2 MUTATED        2      7      1      2      0
  TCN2 WILD-TYPE    116    129    114     38     71
D1022V9, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            129
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCN2 MUTATED        0      4      3      1      4
  TCN2 WILD-TYPE     48    105    127    100     88
D1022V10, multiclass
        clus
vv       TCN2 MUTATED TCN2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1023) Variable = IFT74 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFT74 MUTATED        4      1      1      6
  IFT74 WILD-TYPE    131     91    171    170
D1023V1, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFT74 MUTATED        8      1      2
  IFT74 WILD-TYPE    207    154    160
D1023V2, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IFT74 MUTATED        4      4      1      1
  IFT74 WILD-TYPE    131    120    124     59
D1023V3, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFT74 MUTATED        7      2      1
  IFT74 WILD-TYPE    246    100     88
D1023V4, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFT74 MUTATED        5      5      2
  IFT74 WILD-TYPE    159    242    141
D1023V5, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT74 MUTATED        1      1      6      2      2
  IFT74 WILD-TYPE    120    103     85    119    115
D1023V6, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IFT74 MUTATED        2      7      3
  IFT74 WILD-TYPE    157    244    162
D1023V7, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT74 MUTATED        1      8      2      0      1
  IFT74 WILD-TYPE    117    123    149     94     80
D1023V8, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT74 MUTATED        1      4      2      2      1
  IFT74 WILD-TYPE    117    132    113     38     70
D1023V9, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IFT74 MUTATED        2      5      2      1      0
  IFT74 WILD-TYPE     46    104    128    100     92
D1023V10, multiclass
        clus
vv       IFT74 MUTATED IFT74 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1024) Variable = EVI2B MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EVI2B MUTATED        2      0      4      3
  EVI2B WILD-TYPE    133     92    168    173
D1024V1, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EVI2B MUTATED        4      1      3
  EVI2B WILD-TYPE    211    154    159
D1024V2, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EVI2B MUTATED        3      2      0      1
  EVI2B WILD-TYPE    132    122    125     59
D1024V3, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EVI2B MUTATED        5      1      0
  EVI2B WILD-TYPE    248    101     89
D1024V4, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             5             248
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EVI2B MUTATED        0      7      1
  EVI2B WILD-TYPE    164    240    142
D1024V5, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             0             164
  CLUS_2             7             240
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI2B MUTATED        2      3      3      0      0
  EVI2B WILD-TYPE    119    101     88    121    117
D1024V6, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EVI2B MUTATED        0      8      1
  EVI2B WILD-TYPE    159    243    164
D1024V7, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             0             159
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI2B MUTATED        2      5      2      0      0
  EVI2B WILD-TYPE    116    126    149     94     81
D1024V8, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI2B MUTATED        0      3      1      1      1
  EVI2B WILD-TYPE    118    133    114     39     70
D1024V9, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EVI2B MUTATED        1      2      2      1      0
  EVI2B WILD-TYPE     47    107    128    100     92
D1024V10, multiclass
        clus
vv       EVI2B MUTATED EVI2B WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1025) Variable = PTPRJ MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPRJ MUTATED        5      3      9     16
  PTPRJ WILD-TYPE    130     89    163    160
D1025V1, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3              89
  CLUS_3             9             163
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRJ MUTATED       19      6      4
  PTPRJ WILD-TYPE    196    149    158
D1025V2, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1            19             196
  CLUS_2             6             149
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPRJ MUTATED       11      9      0      5
  PTPRJ WILD-TYPE    124    115    125     55
D1025V3, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1            11             124
  CLUS_2             9             115
  CLUS_3             0             125
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRJ MUTATED       15      9      1
  PTPRJ WILD-TYPE    238     93     88
D1025V4, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1            15             238
  CLUS_2             9              93
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRJ MUTATED        4     21      7
  PTPRJ WILD-TYPE    160    226    136
D1025V5, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             4             160
  CLUS_2            21             226
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRJ MUTATED        3      8     11      3      7
  PTPRJ WILD-TYPE    118     96     80    118    110
D1025V6, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             3             118
  CLUS_2             8              96
  CLUS_3            11              80
  CLUS_4             3             118
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRJ MUTATED        4     26      4
  PTPRJ WILD-TYPE    155    225    161
D1025V7, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             4             155
  CLUS_2            26             225
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRJ MUTATED        4     12     16      1      1
  PTPRJ WILD-TYPE    114    119    135     93     80
D1025V8, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             4             114
  CLUS_2            12             119
  CLUS_3            16             135
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRJ MUTATED        4      7      3      1     11
  PTPRJ WILD-TYPE    114    129    112     39     60
D1025V9, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             129
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRJ MUTATED        2      8     13      2      1
  PTPRJ WILD-TYPE     46    101    117     99     91
D1025V10, multiclass
        clus
vv       PTPRJ MUTATED PTPRJ WILD-TYPE
  CLUS_1             2              46
  CLUS_2             8             101
  CLUS_3            13             117
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1026) Variable = GPR114 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR114 MUTATED        0      0      2      8
  GPR114 WILD-TYPE    135     92    170    168
D1026V1, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR114 MUTATED        8      0      2
  GPR114 WILD-TYPE    207    155    160
D1026V2, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR114 MUTATED        4      4      1      0
  GPR114 WILD-TYPE    131    120    124     60
D1026V3, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR114 MUTATED        7      2      0
  GPR114 WILD-TYPE    246    100     89
D1026V4, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR114 MUTATED        1      8      1
  GPR114 WILD-TYPE    163    239    142
D1026V5, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              8              239
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR114 MUTATED        0      3      6      0      1
  GPR114 WILD-TYPE    121    101     85    121    116
D1026V6, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              3              101
  CLUS_3              6               85
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR114 MUTATED        0      8      2
  GPR114 WILD-TYPE    159    243    163
D1026V7, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              8              243
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR114 MUTATED        1      7      0      0      2
  GPR114 WILD-TYPE    117    124    151     94     79
D1026V8, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              7              124
  CLUS_3              0              151
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR114 MUTATED        0      4      0      2      3
  GPR114 WILD-TYPE    118    132    115     38     68
D1026V9, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR114 MUTATED        1      4      2      2      0
  GPR114 WILD-TYPE     47    105    128     99     92
D1026V10, multiclass
        clus
vv       GPR114 MUTATED GPR114 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1027) Variable = TUBGCP4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TUBGCP4 MUTATED        0      1      1      6
  TUBGCP4 WILD-TYPE    135     91    171    170
D1027V1, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TUBGCP4 MUTATED        5      0      1
  TUBGCP4 WILD-TYPE    210    155    161
D1027V2, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TUBGCP4 MUTATED        4      2      0      0
  TUBGCP4 WILD-TYPE    131    122    125     60
D1027V3, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TUBGCP4 MUTATED        5      1      0
  TUBGCP4 WILD-TYPE    248    101     89
D1027V4, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TUBGCP4 MUTATED        0      5      3
  TUBGCP4 WILD-TYPE    164    242    140
D1027V5, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               5               242
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBGCP4 MUTATED        0      2      4      0      2
  TUBGCP4 WILD-TYPE    121    102     87    121    115
D1027V6, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TUBGCP4 MUTATED        0      7      1
  TUBGCP4 WILD-TYPE    159    244    164
D1027V7, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               7               244
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBGCP4 MUTATED        1      3      3      0      1
  TUBGCP4 WILD-TYPE    117    128    148     94     80
D1027V8, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               128
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBGCP4 MUTATED        0      4      1      0      1
  TUBGCP4 WILD-TYPE    118    132    114     40     70
D1027V9, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TUBGCP4 MUTATED        0      4      1      1      0
  TUBGCP4 WILD-TYPE     48    105    129    100     92
D1027V10, multiclass
        clus
vv       TUBGCP4 MUTATED TUBGCP4 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               4               105
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1028) Variable = F13A1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  F13A1 MUTATED        3      4      2     10
  F13A1 WILD-TYPE    132     88    170    166
D1028V1, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  F13A1 MUTATED       10      2      3
  F13A1 WILD-TYPE    205    153    159
D1028V2, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             2             153
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  F13A1 MUTATED        2      7      4      2
  F13A1 WILD-TYPE    133    117    121     58
D1028V3, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             7             117
  CLUS_3             4             121
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  F13A1 MUTATED        8      3      4
  F13A1 WILD-TYPE    245     99     85
D1028V4, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             3              99
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  F13A1 MUTATED        2     14      3
  F13A1 WILD-TYPE    162    233    140
D1028V5, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            14             233
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F13A1 MUTATED        4      5      6      1      3
  F13A1 WILD-TYPE    117     99     85    120    114
D1028V6, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  F13A1 MUTATED        3     11      5
  F13A1 WILD-TYPE    156    240    160
D1028V7, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            11             240
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F13A1 MUTATED        4      8      5      1      1
  F13A1 WILD-TYPE    114    123    146     93     80
D1028V8, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             123
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F13A1 MUTATED        2      5      4      1      3
  F13A1 WILD-TYPE    116    131    111     39     68
D1028V9, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  F13A1 MUTATED        1      6      3      4      1
  F13A1 WILD-TYPE     47    103    127     97     91
D1028V10, multiclass
        clus
vv       F13A1 MUTATED F13A1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             3             127
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1029) Variable = ZBTB49 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB49 MUTATED        0      3      3      5
  ZBTB49 WILD-TYPE    135     89    169    171
D1029V1, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB49 MUTATED        5      3      3
  ZBTB49 WILD-TYPE    210    152    159
D1029V2, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZBTB49 MUTATED        1      5      3      0
  ZBTB49 WILD-TYPE    134    119    122     60
D1029V3, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              5              119
  CLUS_3              3              122
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB49 MUTATED        2      4      3
  ZBTB49 WILD-TYPE    251     98     86
D1029V4, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              4               98
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB49 MUTATED        3      4      4
  ZBTB49 WILD-TYPE    161    243    139
D1029V5, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              4              243
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB49 MUTATED        2      2      4      1      2
  ZBTB49 WILD-TYPE    119    102     87    120    115
D1029V6, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZBTB49 MUTATED        2      5      4
  ZBTB49 WILD-TYPE    157    246    161
D1029V7, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB49 MUTATED        2      5      2      1      1
  ZBTB49 WILD-TYPE    116    126    149     93     80
D1029V8, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              126
  CLUS_3              2              149
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB49 MUTATED        1      5      3      0      2
  ZBTB49 WILD-TYPE    117    131    112     40     69
D1029V9, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZBTB49 MUTATED        0      5      3      2      1
  ZBTB49 WILD-TYPE     48    104    127     99     91
D1029V10, multiclass
        clus
vv       ZBTB49 MUTATED ZBTB49 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              3              127
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1030) Variable = NUPL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUPL2 MUTATED        1      0      3      5
  NUPL2 WILD-TYPE    134     92    169    171
D1030V1, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUPL2 MUTATED        4      2      1
  NUPL2 WILD-TYPE    211    153    161
D1030V2, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NUPL2 MUTATED        4      4      0      0
  NUPL2 WILD-TYPE    131    120    125     60
D1030V3, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUPL2 MUTATED        7      1      0
  NUPL2 WILD-TYPE    246    101     89
D1030V4, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUPL2 MUTATED        1      5      2
  NUPL2 WILD-TYPE    163    242    141
D1030V5, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUPL2 MUTATED        1      1      5      0      1
  NUPL2 WILD-TYPE    120    103     86    121    116
D1030V6, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NUPL2 MUTATED        1      6      2
  NUPL2 WILD-TYPE    158    245    163
D1030V7, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUPL2 MUTATED        1      3      5      0      0
  NUPL2 WILD-TYPE    117    128    146     94     81
D1030V8, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             5             146
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUPL2 MUTATED        0      3      2      1      1
  NUPL2 WILD-TYPE    118    133    113     39     70
D1030V9, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NUPL2 MUTATED        0      3      3      1      0
  NUPL2 WILD-TYPE     48    106    127    100     92
D1030V10, multiclass
        clus
vv       NUPL2 MUTATED NUPL2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1031) Variable = RAI2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAI2 MUTATED        1      2      2      4
  RAI2 WILD-TYPE    134     90    170    172
D1031V1, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI2 MUTATED        3      2      2
  RAI2 WILD-TYPE    212    153    160
D1031V2, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RAI2 MUTATED        5      1      0      2
  RAI2 WILD-TYPE    130    123    125     58
D1031V3, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI2 MUTATED        8      0      0
  RAI2 WILD-TYPE    245    102     89
D1031V4, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI2 MUTATED        1      6      2
  RAI2 WILD-TYPE    163    241    141
D1031V5, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            6            241
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI2 MUTATED        3      1      4      0      1
  RAI2 WILD-TYPE    118    103     87    121    116
D1031V6, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  RAI2 MUTATED        2      6      1
  RAI2 WILD-TYPE    157    245    164
D1031V7, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI2 MUTATED        2      5      2      0      0
  RAI2 WILD-TYPE    116    126    149     94     81
D1031V8, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI2 MUTATED        0      4      0      1      1
  RAI2 WILD-TYPE    118    132    115     39     70
D1031V9, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RAI2 MUTATED        1      2      3      0      0
  RAI2 WILD-TYPE     47    107    127    101     92
D1031V10, multiclass
        clus
vv       RAI2 MUTATED RAI2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1032) Variable = LEFTY1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LEFTY1 MUTATED        2      0      0      1
  LEFTY1 WILD-TYPE    133     92    172    175
D1032V1, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              1              175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LEFTY1 MUTATED        3      0      0
  LEFTY1 WILD-TYPE    212    155    162
D1032V2, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LEFTY1 MUTATED        2      0      1      0
  LEFTY1 WILD-TYPE    133    124    124     60
D1032V3, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              0              124
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LEFTY1 MUTATED        2      0      1
  LEFTY1 WILD-TYPE    251    102     88
D1032V4, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LEFTY1 MUTATED        1      1      1
  LEFTY1 WILD-TYPE    163    246    142
D1032V5, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              1              246
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEFTY1 MUTATED        2      0      1      0      0
  LEFTY1 WILD-TYPE    119    104     90    121    117
D1032V6, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              0              104
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  LEFTY1 MUTATED        1      1      1
  LEFTY1 WILD-TYPE    158    250    164
D1032V7, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              1              250
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEFTY1 MUTATED        0      1      1      0      1
  LEFTY1 WILD-TYPE    118    130    150     94     80
D1032V8, multiclass
        clus
vv       LEFTY1 MUTATED LEFTY1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEFTY1 MUTATED        1      1      0      0      0
  LEFTY1 WILD-TYPE    117    135    115     40     71
D1032V9, multiclass
[1] "Remove cluster labels:" "LEFTY1 MUTATED"        
clus
  LEFTY1 MUTATED LEFTY1 WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8078 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8486       TCGA-BR-8487       TCGA-BR-8588       TCGA-BR-8590 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8591       TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8678       TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8683       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4J7       TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-A489       TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-A4MI       TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6527       TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6818       TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-8572       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A4YV       TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A74A       TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-F1-6177       TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-FP-7735       TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-FP-8209       TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-FP-A4BE       TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4G8       TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4GH       TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4GT       TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H2 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4H4       TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4HB       TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI       TCGA-L5-A4OM 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4ON       TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A88V       TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A891       TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NG       TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NQ       TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NU       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R5-A7ZR       TCGA-R5-A804       TCGA-R5-A805       TCGA-R6-A6DN 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R6-A6DQ       TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R6-A6XG       TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R6-A8W5       TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-RD-A7BW       TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-RD-A8N0       TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-RD-A8N9       TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-V5-A7RE       TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A8DU       TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LEFTY1 MUTATED        0      1      1      0      0
  LEFTY1 WILD-TYPE     48    108    129    101     92
D1032V10, multiclass
[1] "Remove cluster labels:" "LEFTY1 MUTATED"        
clus
  LEFTY1 MUTATED LEFTY1 WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8078 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8486       TCGA-BR-8487       TCGA-BR-8588       TCGA-BR-8590 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8591       TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8678       TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-8683       TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4J7       TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-A489       TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CD-A4MI       TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6527       TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-6818       TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-8572       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-8578       TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A4YV       TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A6EV       TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A6F0       TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-D7-A74A       TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-F1-6177       TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-FP-7735       TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-FP-8209       TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-FP-A4BE       TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4G8       TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4GH       TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4GT       TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H2 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4H4       TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-HU-A4HB       TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI       TCGA-L5-A4OM 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4ON       TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A88V       TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A891       TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NG       TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NQ       TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L5-A8NU       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A4A5       TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A4MQ       TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A5U7       TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-MX-A663       TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R5-A7O7       TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R5-A7ZR       TCGA-R5-A804       TCGA-R5-A805       TCGA-R6-A6DN 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R6-A6DQ       TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R6-A6XG       TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-R6-A8W5       TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-RD-A7BW       TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-RD-A8N0       TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-RD-A8N9       TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-V5-A7RE       TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A8DU       TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"LEFTY1 WILD-TYPE" "LEFTY1 WILD-TYPE" 

Clustering(1033) Variable = IKBIP MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IKBIP MUTATED        0      1      0      2
  IKBIP WILD-TYPE    135     91    172    174
D1033V1, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IKBIP MUTATED        3      0      0
  IKBIP WILD-TYPE    212    155    162
D1033V2, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IKBIP MUTATED        3      0      0      0
  IKBIP WILD-TYPE    132    124    125     60
D1033V3, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0             124
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IKBIP MUTATED        3      0      0
  IKBIP WILD-TYPE    250    102     89
D1033V4, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IKBIP MUTATED        1      2      0
  IKBIP WILD-TYPE    163    245    143
D1033V5, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             1             163
  CLUS_2             2             245
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IKBIP MUTATED        1      1      1      0      0
  IKBIP WILD-TYPE    120    103     90    121    117
D1033V6, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             1              90
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IKBIP MUTATED        0      3      0
  IKBIP WILD-TYPE    159    248    165
D1033V7, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IKBIP MUTATED        0      1      2      0      0
  IKBIP WILD-TYPE    118    130    149     94     81
D1033V8, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             130
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IKBIP MUTATED        0      2      0      0      1
  IKBIP WILD-TYPE    118    134    115     40     70
D1033V9, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IKBIP MUTATED        0      1      2      0      0
  IKBIP WILD-TYPE     48    108    128    101     92
D1033V10, multiclass
        clus
vv       IKBIP MUTATED IKBIP WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1034) Variable = SLC12A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC12A1 MUTATED        4      2      6     17
  SLC12A1 WILD-TYPE    131     90    166    159
D1034V1, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               2                90
  CLUS_3               6               166
  CLUS_4              17               159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A1 MUTATED       16      5      4
  SLC12A1 WILD-TYPE    199    150    158
D1034V2, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1              16               199
  CLUS_2               5               150
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC12A1 MUTATED       10      4      8      3
  SLC12A1 WILD-TYPE    125    120    117     57
D1034V3, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1              10               125
  CLUS_2               4               120
  CLUS_3               8               117
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A1 MUTATED       17      3      5
  SLC12A1 WILD-TYPE    236     99     84
D1034V4, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1              17               236
  CLUS_2               3                99
  CLUS_3               5                84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A1 MUTATED        6     13      9
  SLC12A1 WILD-TYPE    158    234    134
D1034V5, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               6               158
  CLUS_2              13               234
  CLUS_3               9               134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A1 MUTATED        3      3     11      4      7
  SLC12A1 WILD-TYPE    118    101     80    117    110
D1034V6, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               3               101
  CLUS_3              11                80
  CLUS_4               4               117
  CLUS_5               7               110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC12A1 MUTATED        3     16     10
  SLC12A1 WILD-TYPE    156    235    155
D1034V7, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               3               156
  CLUS_2              16               235
  CLUS_3              10               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A1 MUTATED        3     10      8      3      5
  SLC12A1 WILD-TYPE    115    121    143     91     76
D1034V8, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2              10               121
  CLUS_3               8               143
  CLUS_4               3                91
  CLUS_5               5                76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A1 MUTATED        3      8      6      2      4
  SLC12A1 WILD-TYPE    115    128    109     38     67
D1034V9, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               8               128
  CLUS_3               6               109
  CLUS_4               2                38
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC12A1 MUTATED        2      7      5      6      3
  SLC12A1 WILD-TYPE     46    102    125     95     89
D1034V10, multiclass
        clus
vv       SLC12A1 MUTATED SLC12A1 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               7               102
  CLUS_3               5               125
  CLUS_4               6                95
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1035) Variable = CARD11 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CARD11 MUTATED        2      2      6     19
  CARD11 WILD-TYPE    133     90    166    157
D1035V1, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              6              166
  CLUS_4             19              157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CARD11 MUTATED       16      6      3
  CARD11 WILD-TYPE    199    149    159
D1035V2, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1             16              199
  CLUS_2              6              149
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CARD11 MUTATED       11      9      3      2
  CARD11 WILD-TYPE    124    115    122     58
D1035V3, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1             11              124
  CLUS_2              9              115
  CLUS_3              3              122
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CARD11 MUTATED       18      6      1
  CARD11 WILD-TYPE    235     96     88
D1035V4, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1             18              235
  CLUS_2              6               96
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CARD11 MUTATED        8     13      7
  CARD11 WILD-TYPE    156    234    136
D1035V5, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              8              156
  CLUS_2             13              234
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CARD11 MUTATED        3      4     13      4      4
  CARD11 WILD-TYPE    118    100     78    117    113
D1035V6, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              4              100
  CLUS_3             13               78
  CLUS_4              4              117
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CARD11 MUTATED        7     17      5
  CARD11 WILD-TYPE    152    234    160
D1035V7, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              7              152
  CLUS_2             17              234
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CARD11 MUTATED        3     10     10      4      2
  CARD11 WILD-TYPE    115    121    141     90     79
D1035V8, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              3              115
  CLUS_2             10              121
  CLUS_3             10              141
  CLUS_4              4               90
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CARD11 MUTATED        5      6      4      2      6
  CARD11 WILD-TYPE    113    130    111     38     65
D1035V9, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              6              130
  CLUS_3              4              111
  CLUS_4              2               38
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CARD11 MUTATED        1      8      9      2      3
  CARD11 WILD-TYPE     47    101    121     99     89
D1035V10, multiclass
        clus
vv       CARD11 MUTATED CARD11 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              8              101
  CLUS_3              9              121
  CLUS_4              2               99
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1036) Variable = OLFM1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OLFM1 MUTATED        3      2      2      8
  OLFM1 WILD-TYPE    132     90    170    168
D1036V1, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OLFM1 MUTATED        9      2      2
  OLFM1 WILD-TYPE    206    153    160
D1036V2, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OLFM1 MUTATED        4      6      1      0
  OLFM1 WILD-TYPE    131    118    124     60
D1036V3, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OLFM1 MUTATED        7      3      1
  OLFM1 WILD-TYPE    246     99     88
D1036V4, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OLFM1 MUTATED        4      9      2
  OLFM1 WILD-TYPE    160    238    141
D1036V5, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OLFM1 MUTATED        0      4      5      3      3
  OLFM1 WILD-TYPE    121    100     86    118    114
D1036V6, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             4             100
  CLUS_3             5              86
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OLFM1 MUTATED        3      8      4
  OLFM1 WILD-TYPE    156    243    161
D1036V7, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OLFM1 MUTATED        3      5      4      2      1
  OLFM1 WILD-TYPE    115    126    147     92     80
D1036V8, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OLFM1 MUTATED        3      6      2      1      1
  OLFM1 WILD-TYPE    115    130    113     39     70
D1036V9, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OLFM1 MUTATED        0      6      3      2      2
  OLFM1 WILD-TYPE     48    103    127     99     90
D1036V10, multiclass
        clus
vv       OLFM1 MUTATED OLFM1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1037) Variable = KIF27 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF27 MUTATED        5      4      2      9
  KIF27 WILD-TYPE    130     88    170    167
D1037V1, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4              88
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF27 MUTATED       11      3      3
  KIF27 WILD-TYPE    204    152    159
D1037V2, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIF27 MUTATED        7      6      1      3
  KIF27 WILD-TYPE    128    118    124     57
D1037V3, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             6             118
  CLUS_3             1             124
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF27 MUTATED       13      2      2
  KIF27 WILD-TYPE    240    100     87
D1037V4, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF27 MUTATED        1     16      2
  KIF27 WILD-TYPE    163    231    141
D1037V5, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            16             231
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF27 MUTATED        6      4      6      1      2
  KIF27 WILD-TYPE    115    100     85    120    115
D1037V6, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             6             115
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KIF27 MUTATED        2     15      3
  KIF27 WILD-TYPE    157    236    162
D1037V7, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            15             236
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF27 MUTATED        2     10      5      1      2
  KIF27 WILD-TYPE    116    121    146     93     79
D1037V8, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            10             121
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF27 MUTATED        1      7      2      2      4
  KIF27 WILD-TYPE    117    129    113     38     67
D1037V9, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIF27 MUTATED        0      8      5      2      1
  KIF27 WILD-TYPE     48    101    125     99     91
D1037V10, multiclass
        clus
vv       KIF27 MUTATED KIF27 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             8             101
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1038) Variable = ARSJ MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARSJ MUTATED        1      2      1      6
  ARSJ WILD-TYPE    134     90    171    170
D1038V1, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARSJ MUTATED        4      3      3
  ARSJ WILD-TYPE    211    152    159
D1038V2, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            4            211
  CLUS_2            3            152
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARSJ MUTATED        1      3      1      2
  ARSJ WILD-TYPE    134    121    124     58
D1038V3, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARSJ MUTATED        5      1      1
  ARSJ WILD-TYPE    248    101     88
D1038V4, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARSJ MUTATED        3      5      1
  ARSJ WILD-TYPE    161    242    142
D1038V5, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            3            161
  CLUS_2            5            242
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARSJ MUTATED        0      5      0      2      2
  ARSJ WILD-TYPE    121     99     91    119    115
D1038V6, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            0            121
  CLUS_2            5             99
  CLUS_3            0             91
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARSJ MUTATED        3      3      4
  ARSJ WILD-TYPE    156    248    161
D1038V7, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            3            156
  CLUS_2            3            248
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARSJ MUTATED        3      2      2      2      1
  ARSJ WILD-TYPE    115    129    149     92     80
D1038V8, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            3            115
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARSJ MUTATED        1      4      1      0      2
  ARSJ WILD-TYPE    117    132    114     40     69
D1038V9, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARSJ MUTATED        0      2      3      2      1
  ARSJ WILD-TYPE     48    107    127     99     91
D1038V10, multiclass
        clus
vv       ARSJ MUTATED ARSJ WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1039) Variable = PRICKLE4 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRICKLE4 MUTATED        1      0      0      6
  PRICKLE4 WILD-TYPE    134     92    172    170
D1039V1, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRICKLE4 MUTATED        2      1      1
  PRICKLE4 WILD-TYPE    213    154    161
D1039V2, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                2                213
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRICKLE4 MUTATED        3      2      1      1
  PRICKLE4 WILD-TYPE    132    122    124     59
D1039V3, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                2                122
  CLUS_3                1                124
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRICKLE4 MUTATED        5      2      0
  PRICKLE4 WILD-TYPE    248    100     89
D1039V4, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                5                248
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRICKLE4 MUTATED        1      4      2
  PRICKLE4 WILD-TYPE    163    243    141
D1039V5, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                4                243
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRICKLE4 MUTATED        1      3      1      0      2
  PRICKLE4 WILD-TYPE    120    101     90    121    115
D1039V6, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                3                101
  CLUS_3                1                 90
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PRICKLE4 MUTATED        0      5      2
  PRICKLE4 WILD-TYPE    159    246    163
D1039V7, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                0                159
  CLUS_2                5                246
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRICKLE4 MUTATED        0      2      5      0      0
  PRICKLE4 WILD-TYPE    118    129    146     94     81
D1039V8, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                129
  CLUS_3                5                146
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRICKLE4 MUTATED        0      2      0      0      2
  PRICKLE4 WILD-TYPE    118    134    115     40     69
D1039V9, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                2                134
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRICKLE4 MUTATED        0      2      2      0      0
  PRICKLE4 WILD-TYPE     48    107    128    101     92
D1039V10, multiclass
        clus
vv       PRICKLE4 MUTATED PRICKLE4 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                2                107
  CLUS_3                2                128
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1040) Variable = PIGO MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGO MUTATED        0      1      2      9
  PIGO WILD-TYPE    135     91    170    167
D1040V1, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGO MUTATED        6      2      4
  PIGO WILD-TYPE    209    153    158
D1040V2, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            6            209
  CLUS_2            2            153
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGO MUTATED        5      3      1      0
  PIGO WILD-TYPE    130    121    124     60
D1040V3, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGO MUTATED        8      1      0
  PIGO WILD-TYPE    245    101     89
D1040V4, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            8            245
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGO MUTATED        3      7      2
  PIGO WILD-TYPE    161    240    141
D1040V5, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGO MUTATED        1      5      3      1      2
  PIGO WILD-TYPE    120     99     88    120    115
D1040V6, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            1            120
  CLUS_2            5             99
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGO MUTATED        3      6      3
  PIGO WILD-TYPE    156    245    162
D1040V7, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGO MUTATED        2      5      3      1      1
  PIGO WILD-TYPE    116    126    148     93     80
D1040V8, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGO MUTATED        2      4      2      1      1
  PIGO WILD-TYPE    116    132    113     39     70
D1040V9, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGO MUTATED        1      2      4      2      1
  PIGO WILD-TYPE     47    107    126     99     91
D1040V10, multiclass
        clus
vv       PIGO MUTATED PIGO WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            4            126
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1041) Variable = EFHC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHC1 MUTATED        1      0      1      8
  EFHC1 WILD-TYPE    134     92    171    168
D1041V1, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHC1 MUTATED        7      0      2
  EFHC1 WILD-TYPE    208    155    160
D1041V2, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EFHC1 MUTATED        3      3      0      1
  EFHC1 WILD-TYPE    132    121    125     59
D1041V3, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHC1 MUTATED        4      3      0
  EFHC1 WILD-TYPE    249     99     89
D1041V4, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHC1 MUTATED        0      6      4
  EFHC1 WILD-TYPE    164    241    139
D1041V5, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHC1 MUTATED        1      3      3      0      3
  EFHC1 WILD-TYPE    120    101     88    121    114
D1041V6, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EFHC1 MUTATED        0      8      2
  EFHC1 WILD-TYPE    159    243    163
D1041V7, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             8             243
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHC1 MUTATED        0      5      4      0      1
  EFHC1 WILD-TYPE    118    126    147     94     80
D1041V8, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHC1 MUTATED        0      4      1      0      2
  EFHC1 WILD-TYPE    118    132    114     40     69
D1041V9, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EFHC1 MUTATED        0      4      2      1      0
  EFHC1 WILD-TYPE     48    105    128    100     92
D1041V10, multiclass
        clus
vv       EFHC1 MUTATED EFHC1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1042) Variable = EPB41L5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPB41L5 MUTATED        1      1      1      8
  EPB41L5 WILD-TYPE    134     91    171    168
D1042V1, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               1               171
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EPB41L5 MUTATED        6      2      1
  EPB41L5 WILD-TYPE    209    153    161
D1042V2, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPB41L5 MUTATED        5      4      0      1
  EPB41L5 WILD-TYPE    130    120    125     59
D1042V3, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EPB41L5 MUTATED        7      3      0
  EPB41L5 WILD-TYPE    246     99     89
D1042V4, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EPB41L5 MUTATED        2      7      1
  EPB41L5 WILD-TYPE    162    240    142
D1042V5, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               7               240
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41L5 MUTATED        2      2      5      1      0
  EPB41L5 WILD-TYPE    119    102     86    120    117
D1042V6, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  EPB41L5 MUTATED        2      8      1
  EPB41L5 WILD-TYPE    157    243    164
D1042V7, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               8               243
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41L5 MUTATED        1      5      4      1      0
  EPB41L5 WILD-TYPE    117    126    147     93     81
D1042V8, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41L5 MUTATED        1      3      1      3      1
  EPB41L5 WILD-TYPE    117    133    114     37     70
D1042V9, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               3                37
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPB41L5 MUTATED        1      4      3      0      1
  EPB41L5 WILD-TYPE     47    105    127    101     91
D1042V10, multiclass
        clus
vv       EPB41L5 MUTATED EPB41L5 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1043) Variable = OR52A5 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52A5 MUTATED        2      4      2      3
  OR52A5 WILD-TYPE    133     88    170    173
D1043V1, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              2              170
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52A5 MUTATED        9      0      1
  OR52A5 WILD-TYPE    206    155    161
D1043V2, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR52A5 MUTATED        6      2      0      0
  OR52A5 WILD-TYPE    129    122    125     60
D1043V3, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52A5 MUTATED        6      2      0
  OR52A5 WILD-TYPE    247    100     89
D1043V4, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52A5 MUTATED        1      7      3
  OR52A5 WILD-TYPE    163    240    140
D1043V5, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR52A5 MUTATED        1      4      2      0      4
  OR52A5 WILD-TYPE    120    100     89    121    113
D1043V6, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              2               89
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  OR52A5 MUTATED        2      6      3
  OR52A5 WILD-TYPE    157    245    162
D1043V7, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              6              245
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR52A5 MUTATED        2      4      3      0      2
  OR52A5 WILD-TYPE    116    127    148     94     79
D1043V8, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR52A5 MUTATED        0      4      3      1      1
  OR52A5 WILD-TYPE    118    132    112     39     70
D1043V9, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR52A5 MUTATED        1      4      3      1      0
  OR52A5 WILD-TYPE     47    105    127    100     92
D1043V10, multiclass
        clus
vv       OR52A5 MUTATED OR52A5 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1044) Variable = ASB5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASB5 MUTATED        3      0      1      7
  ASB5 WILD-TYPE    132     92    171    169
D1044V1, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASB5 MUTATED        5      2      1
  ASB5 WILD-TYPE    210    153    161
D1044V2, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ASB5 MUTATED        3      3      1      0
  ASB5 WILD-TYPE    132    121    124     60
D1044V3, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASB5 MUTATED        4      2      1
  ASB5 WILD-TYPE    249    100     88
D1044V4, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASB5 MUTATED        3      4      2
  ASB5 WILD-TYPE    161    243    141
D1044V5, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB5 MUTATED        2      1      3      1      2
  ASB5 WILD-TYPE    119    103     88    120    115
D1044V6, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ASB5 MUTATED        3      6      2
  ASB5 WILD-TYPE    156    245    163
D1044V7, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB5 MUTATED        3      5      2      0      1
  ASB5 WILD-TYPE    115    126    149     94     80
D1044V8, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            126
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB5 MUTATED        2      2      1      1      2
  ASB5 WILD-TYPE    116    134    114     39     69
D1044V9, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ASB5 MUTATED        1      4      1      2      0
  ASB5 WILD-TYPE     47    105    129     99     92
D1044V10, multiclass
        clus
vv       ASB5 MUTATED ASB5 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1045) Variable = MMP10 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MMP10 MUTATED        0      2      0      8
  MMP10 WILD-TYPE    135     90    172    168
D1045V1, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MMP10 MUTATED        8      0      1
  MMP10 WILD-TYPE    207    155    161
D1045V2, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MMP10 MUTATED        2      5      0      2
  MMP10 WILD-TYPE    133    119    125     58
D1045V3, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MMP10 MUTATED        5      4      0
  MMP10 WILD-TYPE    248     98     89
D1045V4, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             4              98
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MMP10 MUTATED        1      6      2
  MMP10 WILD-TYPE    163    241    141
D1045V5, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             6             241
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP10 MUTATED        1      2      5      0      1
  MMP10 WILD-TYPE    120    102     86    121    116
D1045V6, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MMP10 MUTATED        2      6      2
  MMP10 WILD-TYPE    157    245    163
D1045V7, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             6             245
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP10 MUTATED        1      5      4      0      0
  MMP10 WILD-TYPE    117    126    147     94     81
D1045V8, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP10 MUTATED        0      3      1      1      3
  MMP10 WILD-TYPE    118    133    114     39     68
D1045V9, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MMP10 MUTATED        1      3      4      0      0
  MMP10 WILD-TYPE     47    106    126    101     92
D1045V10, multiclass
        clus
vv       MMP10 MUTATED MMP10 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1046) Variable = FGF5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF5 MUTATED        1      0      2      5
  FGF5 WILD-TYPE    134     92    170    171
D1046V1, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF5 MUTATED        4      2      1
  FGF5 WILD-TYPE    211    153    161
D1046V2, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF5 MUTATED        1      2      0      1
  FGF5 WILD-TYPE    134    122    125     59
D1046V3, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF5 MUTATED        3      1      0
  FGF5 WILD-TYPE    250    101     89
D1046V4, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF5 MUTATED        1      6      1
  FGF5 WILD-TYPE    163    241    142
D1046V5, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            6            241
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF5 MUTATED        0      2      4      1      1
  FGF5 WILD-TYPE    121    102     87    120    116
D1046V6, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  FGF5 MUTATED        1      6      1
  FGF5 WILD-TYPE    158    245    164
D1046V7, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF5 MUTATED        0      4      2      1      1
  FGF5 WILD-TYPE    118    127    149     93     80
D1046V8, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            127
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF5 MUTATED        1      5      1      0      0
  FGF5 WILD-TYPE    117    131    114     40     71
D1046V9, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF5 MUTATED        0      5      0      1      1
  FGF5 WILD-TYPE     48    104    130    100     91
D1046V10, multiclass
        clus
vv       FGF5 MUTATED FGF5 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            5            104
  CLUS_3            0            130
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1047) Variable = CWH43 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CWH43 MUTATED        0      3      7      2
  CWH43 WILD-TYPE    135     89    165    174
D1047V1, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3              89
  CLUS_3             7             165
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CWH43 MUTATED        4      5      3
  CWH43 WILD-TYPE    211    150    159
D1047V2, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             5             150
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CWH43 MUTATED        2      4      2      1
  CWH43 WILD-TYPE    133    120    123     59
D1047V3, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CWH43 MUTATED        6      2      1
  CWH43 WILD-TYPE    247    100     88
D1047V4, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CWH43 MUTATED        3      8      1
  CWH43 WILD-TYPE    161    239    142
D1047V5, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWH43 MUTATED        2      3      3      3      1
  CWH43 WILD-TYPE    119    101     88    118    116
D1047V6, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CWH43 MUTATED        5      5      2
  CWH43 WILD-TYPE    154    246    163
D1047V7, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             5             154
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWH43 MUTATED        1      3      4      3      1
  CWH43 WILD-TYPE    117    128    147     91     80
D1047V8, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             4             147
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWH43 MUTATED        5      3      1      0      2
  CWH43 WILD-TYPE    113    133    114     40     69
D1047V9, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CWH43 MUTATED        2      2      3      1      3
  CWH43 WILD-TYPE     46    107    127    100     89
D1047V10, multiclass
        clus
vv       CWH43 MUTATED CWH43 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1048) Variable = MTSS1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTSS1 MUTATED        3      2      0     10
  MTSS1 WILD-TYPE    132     90    172    166
D1048V1, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTSS1 MUTATED       10      1      1
  MTSS1 WILD-TYPE    205    154    161
D1048V2, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTSS1 MUTATED        4      5      2      1
  MTSS1 WILD-TYPE    131    119    123     59
D1048V3, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTSS1 MUTATED        9      2      1
  MTSS1 WILD-TYPE    244    100     88
D1048V4, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTSS1 MUTATED        1     10      3
  MTSS1 WILD-TYPE    163    237    140
D1048V5, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1 MUTATED        0      3      8      1      2
  MTSS1 WILD-TYPE    121    101     83    120    115
D1048V6, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MTSS1 MUTATED        1     12      2
  MTSS1 WILD-TYPE    158    239    163
D1048V7, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1 MUTATED        0      6      8      1      0
  MTSS1 WILD-TYPE    118    125    143     93     81
D1048V8, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             8             143
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1 MUTATED        1      5      1      1      4
  MTSS1 WILD-TYPE    117    131    114     39     67
D1048V9, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1 MUTATED        0      5      6      0      1
  MTSS1 WILD-TYPE     48    104    124    101     91
D1048V10, multiclass
        clus
vv       MTSS1 MUTATED MTSS1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1049) Variable = KIAA2018 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA2018 MUTATED        6      5      4     17
  KIAA2018 WILD-TYPE    129     87    168    159
D1049V1, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                6                129
  CLUS_2                5                 87
  CLUS_3                4                168
  CLUS_4               17                159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA2018 MUTATED       19      6      4
  KIAA2018 WILD-TYPE    196    149    158
D1049V2, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1               19                196
  CLUS_2                6                149
  CLUS_3                4                158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KIAA2018 MUTATED       11      8      2      4
  KIAA2018 WILD-TYPE    124    116    123     56
D1049V3, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1               11                124
  CLUS_2                8                116
  CLUS_3                2                123
  CLUS_4                4                 56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA2018 MUTATED       20      4      1
  KIAA2018 WILD-TYPE    233     98     88
D1049V4, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1               20                233
  CLUS_2                4                 98
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA2018 MUTATED        7     20      3
  KIAA2018 WILD-TYPE    157    227    140
D1049V5, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                7                157
  CLUS_2               20                227
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA2018 MUTATED        2      9     11      6      2
  KIAA2018 WILD-TYPE    119     95     80    115    115
D1049V6, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                2                119
  CLUS_2                9                 95
  CLUS_3               11                 80
  CLUS_4                6                115
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  KIAA2018 MUTATED        4     23      5
  KIAA2018 WILD-TYPE    155    228    160
D1049V7, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                4                155
  CLUS_2               23                228
  CLUS_3                5                160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA2018 MUTATED        5     14      7      4      2
  KIAA2018 WILD-TYPE    113    117    144     90     79
D1049V8, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                5                113
  CLUS_2               14                117
  CLUS_3                7                144
  CLUS_4                4                 90
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA2018 MUTATED        3     12      3      2      6
  KIAA2018 WILD-TYPE    115    124    112     38     65
D1049V9, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                3                115
  CLUS_2               12                124
  CLUS_3                3                112
  CLUS_4                2                 38
  CLUS_5                6                 65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KIAA2018 MUTATED        3     11      6      2      4
  KIAA2018 WILD-TYPE     45     98    124     99     88
D1049V10, multiclass
        clus
vv       KIAA2018 MUTATED KIAA2018 WILD-TYPE
  CLUS_1                3                 45
  CLUS_2               11                 98
  CLUS_3                6                124
  CLUS_4                2                 99
  CLUS_5                4                 88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1050) Variable = SMC5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMC5 MUTATED        1      2      3      7
  SMC5 WILD-TYPE    134     90    169    169
D1050V1, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMC5 MUTATED        6      2      3
  SMC5 WILD-TYPE    209    153    159
D1050V2, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMC5 MUTATED        5      4      2      1
  SMC5 WILD-TYPE    130    120    123     59
D1050V3, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            4            120
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMC5 MUTATED        7      2      3
  SMC5 WILD-TYPE    246    100     86
D1050V4, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            2            100
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMC5 MUTATED        3      7      2
  SMC5 WILD-TYPE    161    240    141
D1050V5, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMC5 MUTATED        0      2      6      2      2
  SMC5 WILD-TYPE    121    102     85    119    115
D1050V6, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            6             85
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SMC5 MUTATED        2      8      3
  SMC5 WILD-TYPE    157    243    162
D1050V7, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            8            243
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMC5 MUTATED        3      5      3      2      0
  SMC5 WILD-TYPE    115    126    148     92     81
D1050V8, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMC5 MUTATED        2      3      2      2      1
  SMC5 WILD-TYPE    116    133    113     38     70
D1050V9, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMC5 MUTATED        1      4      2      1      2
  SMC5 WILD-TYPE     47    105    128    100     90
D1050V10, multiclass
        clus
vv       SMC5 MUTATED SMC5 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1051) Variable = BAG4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAG4 MUTATED        0      0      0      5
  BAG4 WILD-TYPE    135     92    172    171
D1051V1, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAG4 MUTATED        3      0      0
  BAG4 WILD-TYPE    212    155    162
D1051V2, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BAG4 MUTATED        4      0      0      0
  BAG4 WILD-TYPE    131    124    125     60
D1051V3, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            0            124
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAG4 MUTATED        3      0      1
  BAG4 WILD-TYPE    250    102     88
D1051V4, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAG4 MUTATED        1      3      1
  BAG4 WILD-TYPE    163    244    142
D1051V5, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAG4 MUTATED        0      3      1      0      1
  BAG4 WILD-TYPE    121    101     90    121    116
D1051V6, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            1             90
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BAG4 MUTATED        1      3      1
  BAG4 WILD-TYPE    158    248    164
D1051V7, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAG4 MUTATED        2      2      1      0      0
  BAG4 WILD-TYPE    116    129    150     94     81
D1051V8, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            129
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAG4 MUTATED        0      2      1      0      0
  BAG4 WILD-TYPE    118    134    114     40     71
D1051V9, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BAG4 MUTATED        0      0      2      1      0
  BAG4 WILD-TYPE     48    109    128    100     92
D1051V10, multiclass
        clus
vv       BAG4 MUTATED BAG4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            0            109
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1052) Variable = ZMYND8 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYND8 MUTATED        3      0      2     16
  ZMYND8 WILD-TYPE    132     92    170    160
D1052V1, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4             16              160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZMYND8 MUTATED       17      1      1
  ZMYND8 WILD-TYPE    198    154    161
D1052V2, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1             17              198
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZMYND8 MUTATED        9      5      2      0
  ZMYND8 WILD-TYPE    126    119    123     60
D1052V3, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              9              126
  CLUS_2              5              119
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZMYND8 MUTATED       11      4      1
  ZMYND8 WILD-TYPE    242     98     88
D1052V4, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZMYND8 MUTATED        3     14      3
  ZMYND8 WILD-TYPE    161    233    140
D1052V5, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              3              161
  CLUS_2             14              233
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND8 MUTATED        1      6      8      1      4
  ZMYND8 WILD-TYPE    120     98     83    120    113
D1052V6, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              6               98
  CLUS_3              8               83
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZMYND8 MUTATED        0     17      3
  ZMYND8 WILD-TYPE    159    234    162
D1052V7, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              0              159
  CLUS_2             17              234
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND8 MUTATED        0     10      9      0      1
  ZMYND8 WILD-TYPE    118    121    142     94     80
D1052V8, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              0              118
  CLUS_2             10              121
  CLUS_3              9              142
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND8 MUTATED        0      9      2      1      5
  ZMYND8 WILD-TYPE    118    127    113     39     66
D1052V9, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              9              127
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZMYND8 MUTATED        1      8      7      1      0
  ZMYND8 WILD-TYPE     47    101    123    100     92
D1052V10, multiclass
        clus
vv       ZMYND8 MUTATED ZMYND8 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              8              101
  CLUS_3              7              123
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1053) Variable = MPP5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MPP5 MUTATED        0      2      3      4
  MPP5 WILD-TYPE    135     90    169    172
D1053V1, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MPP5 MUTATED        4      3      2
  MPP5 WILD-TYPE    211    152    160
D1053V2, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            3            152
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MPP5 MUTATED        3      3      1      0
  MPP5 WILD-TYPE    132    121    124     60
D1053V3, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MPP5 MUTATED        5      2      0
  MPP5 WILD-TYPE    248    100     89
D1053V4, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MPP5 MUTATED        3      5      1
  MPP5 WILD-TYPE    161    242    142
D1053V5, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            5            242
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPP5 MUTATED        0      2      3      4      0
  MPP5 WILD-TYPE    121    102     88    117    117
D1053V6, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            4            117
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MPP5 MUTATED        3      4      2
  MPP5 WILD-TYPE    156    247    163
D1053V7, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPP5 MUTATED        1      2      2      4      0
  MPP5 WILD-TYPE    117    129    149     90     81
D1053V8, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            4             90
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPP5 MUTATED        3      2      2      0      2
  MPP5 WILD-TYPE    115    134    113     40     69
D1053V9, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            2            134
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MPP5 MUTATED        0      3      2      0      4
  MPP5 WILD-TYPE     48    106    128    101     88
D1053V10, multiclass
        clus
vv       MPP5 MUTATED MPP5 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1054) Variable = ECSIT MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ECSIT MUTATED        1      0      2      5
  ECSIT WILD-TYPE    134     92    170    171
D1054V1, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ECSIT MUTATED        4      1      2
  ECSIT WILD-TYPE    211    154    160
D1054V2, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ECSIT MUTATED        1      2      1      0
  ECSIT WILD-TYPE    134    122    124     60
D1054V3, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ECSIT MUTATED        3      0      1
  ECSIT WILD-TYPE    250    102     88
D1054V4, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             3             250
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ECSIT MUTATED        1      5      2
  ECSIT WILD-TYPE    163    242    141
D1054V5, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ECSIT MUTATED        1      1      4      1      1
  ECSIT WILD-TYPE    120    103     87    120    116
D1054V6, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ECSIT MUTATED        1      5      2
  ECSIT WILD-TYPE    158    246    163
D1054V7, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ECSIT MUTATED        2      5      0      1      0
  ECSIT WILD-TYPE    116    126    151     93     81
D1054V8, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             0             151
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ECSIT MUTATED        1      3      1      1      0
  ECSIT WILD-TYPE    117    133    114     39     71
D1054V9, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ECSIT MUTATED        0      3      0      2      1
  ECSIT WILD-TYPE     48    106    130     99     91
D1054V10, multiclass
        clus
vv       ECSIT MUTATED ECSIT WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             0             130
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1055) Variable = CSNK2A2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2A2 MUTATED        1      2      0      6
  CSNK2A2 WILD-TYPE    134     90    172    170
D1055V1, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK2A2 MUTATED        8      1      0
  CSNK2A2 WILD-TYPE    207    154    162
D1055V2, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK2A2 MUTATED        3      3      0      0
  CSNK2A2 WILD-TYPE    132    121    125     60
D1055V3, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK2A2 MUTATED        5      1      0
  CSNK2A2 WILD-TYPE    248    101     89
D1055V4, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK2A2 MUTATED        1      8      0
  CSNK2A2 WILD-TYPE    163    239    143
D1055V5, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               8               239
  CLUS_3               0               143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK2A2 MUTATED        1      3      4      0      1
  CSNK2A2 WILD-TYPE    120    101     87    121    116
D1055V6, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK2A2 MUTATED        0      9      0
  CSNK2A2 WILD-TYPE    159    242    165
D1055V7, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               9               242
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK2A2 MUTATED        2      4      3      0      0
  CSNK2A2 WILD-TYPE    116    127    148     94     81
D1055V8, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               4               127
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK2A2 MUTATED        0      6      0      1      1
  CSNK2A2 WILD-TYPE    118    130    115     39     70
D1055V9, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               130
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK2A2 MUTATED        2      3      3      0      0
  CSNK2A2 WILD-TYPE     46    106    127    101     92
D1055V10, multiclass
        clus
vv       CSNK2A2 MUTATED CSNK2A2 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1056) Variable = CCR9 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCR9 MUTATED        2      1      1      4
  CCR9 WILD-TYPE    133     91    171    172
D1056V1, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR9 MUTATED        7      1      0
  CCR9 WILD-TYPE    208    154    162
D1056V2, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCR9 MUTATED        3      3      0      1
  CCR9 WILD-TYPE    132    121    125     59
D1056V3, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR9 MUTATED        4      3      0
  CCR9 WILD-TYPE    249     99     89
D1056V4, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR9 MUTATED        3      5      0
  CCR9 WILD-TYPE    161    242    143
D1056V5, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            3            161
  CLUS_2            5            242
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR9 MUTATED        1      2      4      0      1
  CCR9 WILD-TYPE    120    102     87    121    116
D1056V6, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CCR9 MUTATED        1      7      0
  CCR9 WILD-TYPE    158    244    165
D1056V7, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            7            244
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR9 MUTATED        2      3      2      0      1
  CCR9 WILD-TYPE    116    128    149     94     80
D1056V8, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR9 MUTATED        1      5      0      1      1
  CCR9 WILD-TYPE    117    131    115     39     70
D1056V9, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCR9 MUTATED        1      4      3      0      0
  CCR9 WILD-TYPE     47    105    127    101     92
D1056V10, multiclass
        clus
vv       CCR9 MUTATED CCR9 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1057) Variable = PODN MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PODN MUTATED        1      0      4      9
  PODN WILD-TYPE    134     92    168    167
D1057V1, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PODN MUTATED        4      4      4
  PODN WILD-TYPE    211    151    158
D1057V2, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            4            211
  CLUS_2            4            151
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PODN MUTATED        2      5      4      1
  PODN WILD-TYPE    133    119    121     59
D1057V3, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            2            133
  CLUS_2            5            119
  CLUS_3            4            121
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PODN MUTATED        8      1      3
  PODN WILD-TYPE    245    101     86
D1057V4, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            8            245
  CLUS_2            1            101
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PODN MUTATED        3      7      3
  PODN WILD-TYPE    161    240    140
D1057V5, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            3            161
  CLUS_2            7            240
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PODN MUTATED        1      3      3      3      3
  PODN WILD-TYPE    120    101     88    118    114
D1057V6, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            3             88
  CLUS_4            3            118
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PODN MUTATED        3      6      6
  PODN WILD-TYPE    156    245    159
D1057V7, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PODN MUTATED        1      1      7      3      3
  PODN WILD-TYPE    117    130    144     91     78
D1057V8, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            130
  CLUS_3            7            144
  CLUS_4            3             91
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PODN MUTATED        2      2      3      2      3
  PODN WILD-TYPE    116    134    112     38     68
D1057V9, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            2            116
  CLUS_2            2            134
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PODN MUTATED        0      2      3      4      3
  PODN WILD-TYPE     48    107    127     97     89
D1057V10, multiclass
        clus
vv       PODN MUTATED PODN WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            3            127
  CLUS_4            4             97
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1058) Variable = VWA1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VWA1 MUTATED        1      0      0      7
  VWA1 WILD-TYPE    134     92    172    169
D1058V1, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  VWA1 MUTATED        7      0      0
  VWA1 WILD-TYPE    208    155    162
D1058V2, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VWA1 MUTATED        5      1      0      0
  VWA1 WILD-TYPE    130    123    125     60
D1058V3, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  VWA1 MUTATED        6      0      0
  VWA1 WILD-TYPE    247    102     89
D1058V4, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  VWA1 MUTATED        1      5      2
  VWA1 WILD-TYPE    163    242    141
D1058V5, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA1 MUTATED        0      1      6      0      1
  VWA1 WILD-TYPE    121    103     85    121    116
D1058V6, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  VWA1 MUTATED        0      8      0
  VWA1 WILD-TYPE    159    243    165
D1058V7, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA1 MUTATED        0      5      3      0      0
  VWA1 WILD-TYPE    118    126    148     94     81
D1058V8, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            5            126
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA1 MUTATED        0      3      0      1      3
  VWA1 WILD-TYPE    118    133    115     39     68
D1058V9, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VWA1 MUTATED        0      4      3      0      0
  VWA1 WILD-TYPE     48    105    127    101     92
D1058V10, multiclass
        clus
vv       VWA1 MUTATED VWA1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1059) Variable = PADI3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PADI3 MUTATED        3      1      2      9
  PADI3 WILD-TYPE    132     91    170    167
D1059V1, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PADI3 MUTATED        8      1      3
  PADI3 WILD-TYPE    207    154    159
D1059V2, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PADI3 MUTATED        6      4      1      2
  PADI3 WILD-TYPE    129    120    124     58
D1059V3, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PADI3 MUTATED        9      3      1
  PADI3 WILD-TYPE    244     99     88
D1059V4, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PADI3 MUTATED        3      8      3
  PADI3 WILD-TYPE    161    239    140
D1059V5, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             8             239
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PADI3 MUTATED        0      3      6      2      3
  PADI3 WILD-TYPE    121    101     85    119    114
D1059V6, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PADI3 MUTATED        1     12      2
  PADI3 WILD-TYPE    158    239    163
D1059V7, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PADI3 MUTATED        1      6      6      0      2
  PADI3 WILD-TYPE    117    125    145     94     79
D1059V8, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PADI3 MUTATED        0      3      2      1      4
  PADI3 WILD-TYPE    118    133    113     39     67
D1059V9, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PADI3 MUTATED        0      3      5      1      1
  PADI3 WILD-TYPE     48    106    125    100     91
D1059V10, multiclass
        clus
vv       PADI3 MUTATED PADI3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1060) Variable = BMPR2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BMPR2 MUTATED        3      0      2     17
  BMPR2 WILD-TYPE    132     92    170    159
D1060V1, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BMPR2 MUTATED       10      3      6
  BMPR2 WILD-TYPE    205    152    156
D1060V2, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             3             152
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BMPR2 MUTATED        9      7      3      1
  BMPR2 WILD-TYPE    126    117    122     59
D1060V3, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             7             117
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BMPR2 MUTATED       12      6      2
  BMPR2 WILD-TYPE    241     96     87
D1060V4, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1            12             241
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BMPR2 MUTATED        3     13      5
  BMPR2 WILD-TYPE    161    234    138
D1060V5, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            13             234
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BMPR2 MUTATED        0      6     12      2      1
  BMPR2 WILD-TYPE    121     98     79    119    116
D1060V6, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             6              98
  CLUS_3            12              79
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BMPR2 MUTATED        1     18      3
  BMPR2 WILD-TYPE    158    233    162
D1060V7, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            18             233
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BMPR2 MUTATED        0     11      8      1      2
  BMPR2 WILD-TYPE    118    120    143     93     79
D1060V8, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2            11             120
  CLUS_3             8             143
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BMPR2 MUTATED        1      6      1      1      7
  BMPR2 WILD-TYPE    117    130    114     39     64
D1060V9, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BMPR2 MUTATED        0      7      6      2      1
  BMPR2 WILD-TYPE     48    102    124     99     91
D1060V10, multiclass
        clus
vv       BMPR2 MUTATED BMPR2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1061) Variable = SETD6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD6 MUTATED        0      0      0      8
  SETD6 WILD-TYPE    135     92    172    168
D1061V1, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD6 MUTATED        6      0      2
  SETD6 WILD-TYPE    209    155    160
D1061V2, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD6 MUTATED        2      3      0      1
  SETD6 WILD-TYPE    133    121    125     59
D1061V3, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD6 MUTATED        4      2      0
  SETD6 WILD-TYPE    249    100     89
D1061V4, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD6 MUTATED        0      5      2
  SETD6 WILD-TYPE    164    242    141
D1061V5, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD6 MUTATED        1      1      3      0      2
  SETD6 WILD-TYPE    120    103     88    121    115
D1061V6, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD6 MUTATED        0      6      2
  SETD6 WILD-TYPE    159    245    163
D1061V7, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD6 MUTATED        0      3      4      0      1
  SETD6 WILD-TYPE    118    128    147     94     80
D1061V8, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD6 MUTATED        0      2      2      0      3
  SETD6 WILD-TYPE    118    134    113     40     68
D1061V9, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD6 MUTATED        0      3      4      0      0
  SETD6 WILD-TYPE     48    106    126    101     92
D1061V10, multiclass
        clus
vv       SETD6 MUTATED SETD6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1062) Variable = GPR84 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR84 MUTATED        0      1      1      3
  GPR84 WILD-TYPE    135     91    171    173
D1062V1, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR84 MUTATED        3      1      0
  GPR84 WILD-TYPE    212    154    162
D1062V2, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR84 MUTATED        0      1      0      2
  GPR84 WILD-TYPE    135    123    125     58
D1062V3, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR84 MUTATED        2      0      1
  GPR84 WILD-TYPE    251    102     88
D1062V4, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR84 MUTATED        1      4      0
  GPR84 WILD-TYPE    163    243    143
D1062V5, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR84 MUTATED        1      1      2      1      0
  GPR84 WILD-TYPE    120    103     89    120    117
D1062V6, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GPR84 MUTATED        1      2      2
  GPR84 WILD-TYPE    158    249    163
D1062V7, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             2             249
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR84 MUTATED        2      2      0      1      0
  GPR84 WILD-TYPE    116    129    151     93     81
D1062V8, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             129
  CLUS_3             0             151
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR84 MUTATED        0      2      2      0      0
  GPR84 WILD-TYPE    118    134    113     40     71
D1062V9, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR84 MUTATED        0      2      0      1      1
  GPR84 WILD-TYPE     48    107    130    100     91
D1062V10, multiclass
        clus
vv       GPR84 MUTATED GPR84 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1063) Variable = TTC3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC3 MUTATED        5      3      7     17
  TTC3 WILD-TYPE    130     89    165    159
D1063V1, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3             89
  CLUS_3            7            165
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTC3 MUTATED       15      7      6
  TTC3 WILD-TYPE    200    148    156
D1063V2, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1           15            200
  CLUS_2            7            148
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTC3 MUTATED       10     10      3      4
  TTC3 WILD-TYPE    125    114    122     56
D1063V3, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1           10            125
  CLUS_2           10            114
  CLUS_3            3            122
  CLUS_4            4             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTC3 MUTATED       17      6      4
  TTC3 WILD-TYPE    236     96     85
D1063V4, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1           17            236
  CLUS_2            6             96
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTC3 MUTATED        4     18      8
  TTC3 WILD-TYPE    160    229    135
D1063V5, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            4            160
  CLUS_2           18            229
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTC3 MUTATED        6      8      8      3      5
  TTC3 WILD-TYPE    115     96     83    118    112
D1063V6, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            6            115
  CLUS_2            8             96
  CLUS_3            8             83
  CLUS_4            3            118
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TTC3 MUTATED        5     22      5
  TTC3 WILD-TYPE    154    229    160
D1063V7, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           22            229
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTC3 MUTATED        6     10     11      3      2
  TTC3 WILD-TYPE    112    121    140     91     79
D1063V8, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            6            112
  CLUS_2           10            121
  CLUS_3           11            140
  CLUS_4            3             91
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTC3 MUTATED        5      9      3      1      8
  TTC3 WILD-TYPE    113    127    112     39     63
D1063V9, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            5            113
  CLUS_2            9            127
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            8             63
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTC3 MUTATED        2      6     13      2      3
  TTC3 WILD-TYPE     46    103    117     99     89
D1063V10, multiclass
        clus
vv       TTC3 MUTATED TTC3 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3           13            117
  CLUS_4            2             99
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1064) Variable = PLK2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLK2 MUTATED        2      0      0      6
  PLK2 WILD-TYPE    133     92    172    170
D1064V1, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK2 MUTATED        7      0      0
  PLK2 WILD-TYPE    208    155    162
D1064V2, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLK2 MUTATED        2      4      0      0
  PLK2 WILD-TYPE    133    120    125     60
D1064V3, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK2 MUTATED        3      3      0
  PLK2 WILD-TYPE    250     99     89
D1064V4, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK2 MUTATED        1      6      1
  PLK2 WILD-TYPE    163    241    142
D1064V5, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            6            241
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK2 MUTATED        0      1      6      0      1
  PLK2 WILD-TYPE    121    103     85    121    116
D1064V6, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK2 MUTATED        1      5      2
  PLK2 WILD-TYPE    158    246    163
D1064V7, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK2 MUTATED        1      6      1      0      0
  PLK2 WILD-TYPE    117    125    150     94     81
D1064V8, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            125
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK2 MUTATED        0      3      1      2      0
  PLK2 WILD-TYPE    118    133    114     38     71
D1064V9, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK2 MUTATED        1      4      0      1      0
  PLK2 WILD-TYPE     47    105    130    100     92
D1064V10, multiclass
        clus
vv       PLK2 MUTATED PLK2 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            0            130
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1065) Variable = ABCC2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCC2 MUTATED        6      2      3      9
  ABCC2 WILD-TYPE    129     90    169    167
D1065V1, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             2              90
  CLUS_3             3             169
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC2 MUTATED       12      2      5
  ABCC2 WILD-TYPE    203    153    157
D1065V2, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             2             153
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCC2 MUTATED        3      6      3      4
  ABCC2 WILD-TYPE    132    118    122     56
D1065V3, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC2 MUTATED       11      4      1
  ABCC2 WILD-TYPE    242     98     88
D1065V4, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC2 MUTATED        5     11      5
  ABCC2 WILD-TYPE    159    236    138
D1065V5, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            11             236
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC2 MUTATED        2      1      7      5      6
  ABCC2 WILD-TYPE    119    103     84    116    111
D1065V6, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             5             116
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCC2 MUTATED        6     11      5
  ABCC2 WILD-TYPE    153    240    160
D1065V7, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            11             240
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC2 MUTATED        2      7      9      3      1
  ABCC2 WILD-TYPE    116    124    142     91     80
D1065V8, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             3              91
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC2 MUTATED        1      9      2      0      5
  ABCC2 WILD-TYPE    117    127    113     40     66
D1065V9, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             127
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCC2 MUTATED        0      7      5      3      2
  ABCC2 WILD-TYPE     48    102    125     98     90
D1065V10, multiclass
        clus
vv       ABCC2 MUTATED ABCC2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             7             102
  CLUS_3             5             125
  CLUS_4             3              98
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1066) Variable = CXXC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CXXC1 MUTATED        2      2      2     10
  CXXC1 WILD-TYPE    133     90    170    166
D1066V1, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CXXC1 MUTATED        7      2      6
  CXXC1 WILD-TYPE    208    153    156
D1066V2, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CXXC1 MUTATED        2      5      1      4
  CXXC1 WILD-TYPE    133    119    124     56
D1066V3, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CXXC1 MUTATED        7      4      1
  CXXC1 WILD-TYPE    246     98     88
D1066V4, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CXXC1 MUTATED        4      7      4
  CXXC1 WILD-TYPE    160    240    139
D1066V5, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             7             240
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CXXC1 MUTATED        2      3      4      2      4
  CXXC1 WILD-TYPE    119    101     87    119    113
D1066V6, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CXXC1 MUTATED        3      9      4
  CXXC1 WILD-TYPE    156    242    161
D1066V7, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             9             242
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CXXC1 MUTATED        0      5      6      2      3
  CXXC1 WILD-TYPE    118    126    145     92     78
D1066V8, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             126
  CLUS_3             6             145
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CXXC1 MUTATED        3      4      2      0      6
  CXXC1 WILD-TYPE    115    132    113     40     65
D1066V9, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CXXC1 MUTATED        0      4      7      2      2
  CXXC1 WILD-TYPE     48    105    123     99     90
D1066V10, multiclass
        clus
vv       CXXC1 MUTATED CXXC1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             7             123
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1067) Variable = DGAT1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DGAT1 MUTATED        0      0      1      8
  DGAT1 WILD-TYPE    135     92    171    168
D1067V1, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DGAT1 MUTATED        7      1      1
  DGAT1 WILD-TYPE    208    154    161
D1067V2, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DGAT1 MUTATED        1      3      0      0
  DGAT1 WILD-TYPE    134    121    125     60
D1067V3, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DGAT1 MUTATED        2      2      0
  DGAT1 WILD-TYPE    251    100     89
D1067V4, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DGAT1 MUTATED        0      8      1
  DGAT1 WILD-TYPE    164    239    142
D1067V5, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGAT1 MUTATED        2      3      4      0      0
  DGAT1 WILD-TYPE    119    101     87    121    117
D1067V6, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  DGAT1 MUTATED        0      7      2
  DGAT1 WILD-TYPE    159    244    163
D1067V7, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGAT1 MUTATED        2      4      3      0      0
  DGAT1 WILD-TYPE    116    127    148     94     81
D1067V8, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGAT1 MUTATED        0      4      2      0      2
  DGAT1 WILD-TYPE    118    132    113     40     69
D1067V9, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DGAT1 MUTATED        0      5      2      1      0
  DGAT1 WILD-TYPE     48    104    128    100     92
D1067V10, multiclass
        clus
vv       DGAT1 MUTATED DGAT1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1068) Variable = ZNF506 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF506 MUTATED        1      2      1      5
  ZNF506 WILD-TYPE    134     90    171    171
D1068V1, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2               90
  CLUS_3              1              171
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF506 MUTATED        3      1      2
  ZNF506 WILD-TYPE    212    154    160
D1068V2, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF506 MUTATED        1      5      0      1
  ZNF506 WILD-TYPE    134    119    125     59
D1068V3, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF506 MUTATED        4      3      0
  ZNF506 WILD-TYPE    249     99     89
D1068V4, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF506 MUTATED        2      4      2
  ZNF506 WILD-TYPE    162    243    141
D1068V5, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF506 MUTATED        0      2      4      1      1
  ZNF506 WILD-TYPE    121    102     87    120    116
D1068V6, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF506 MUTATED        1      6      2
  ZNF506 WILD-TYPE    158    245    163
D1068V7, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF506 MUTATED        0      4      3      1      1
  ZNF506 WILD-TYPE    118    127    148     93     80
D1068V8, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF506 MUTATED        1      3      0      1      1
  ZNF506 WILD-TYPE    117    133    115     39     70
D1068V9, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF506 MUTATED        1      1      2      1      1
  ZNF506 WILD-TYPE     47    108    128    100     91
D1068V10, multiclass
        clus
vv       ZNF506 MUTATED ZNF506 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              1              108
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1069) Variable = ATP2B1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP2B1 MUTATED        1      1      6     11
  ATP2B1 WILD-TYPE    134     91    166    165
D1069V1, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              6              166
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B1 MUTATED        9      3      3
  ATP2B1 WILD-TYPE    206    152    159
D1069V2, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP2B1 MUTATED        7      7      1      0
  ATP2B1 WILD-TYPE    128    117    124     60
D1069V3, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B1 MUTATED       11      3      1
  ATP2B1 WILD-TYPE    242     99     88
D1069V4, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B1 MUTATED        4     10      4
  ATP2B1 WILD-TYPE    160    237    139
D1069V5, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             10              237
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B1 MUTATED        2      5      6      3      2
  ATP2B1 WILD-TYPE    119     99     85    118    115
D1069V6, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              5               99
  CLUS_3              6               85
  CLUS_4              3              118
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP2B1 MUTATED        3     12      4
  ATP2B1 WILD-TYPE    156    239    161
D1069V7, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             12              239
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B1 MUTATED        4      4      7      3      1
  ATP2B1 WILD-TYPE    114    127    144     91     80
D1069V8, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              4              127
  CLUS_3              7              144
  CLUS_4              3               91
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B1 MUTATED        2      5      3      1      3
  ATP2B1 WILD-TYPE    116    131    112     39     68
D1069V9, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              131
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP2B1 MUTATED        2      2      5      2      3
  ATP2B1 WILD-TYPE     46    107    125     99     89
D1069V10, multiclass
        clus
vv       ATP2B1 MUTATED ATP2B1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              2              107
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1070) Variable = PI16 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PI16 MUTATED        1      0      1      4
  PI16 WILD-TYPE    134     92    171    172
D1070V1, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PI16 MUTATED        3      1      1
  PI16 WILD-TYPE    212    154    161
D1070V2, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PI16 MUTATED        0      3      1      0
  PI16 WILD-TYPE    135    121    124     60
D1070V3, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PI16 MUTATED        0      3      1
  PI16 WILD-TYPE    253     99     88
D1070V4, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            0            253
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PI16 MUTATED        2      3      1
  PI16 WILD-TYPE    162    244    142
D1070V5, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PI16 MUTATED        1      1      2      1      1
  PI16 WILD-TYPE    120    103     89    120    116
D1070V6, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PI16 MUTATED        1      3      2
  PI16 WILD-TYPE    158    248    163
D1070V7, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PI16 MUTATED        1      2      3      0      0
  PI16 WILD-TYPE    117    129    148     94     81
D1070V8, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PI16 MUTATED        1      2      1      0      0
  PI16 WILD-TYPE    117    134    114     40     71
D1070V9, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PI16 MUTATED        0      2      2      0      0
  PI16 WILD-TYPE     48    107    128    101     92
D1070V10, multiclass
        clus
vv       PI16 MUTATED PI16 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1071) Variable = TOPBP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TOPBP1 MUTATED        1      4      3     14
  TOPBP1 WILD-TYPE    134     88    169    162
D1071V1, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              4               88
  CLUS_3              3              169
  CLUS_4             14              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TOPBP1 MUTATED       12      3      2
  TOPBP1 WILD-TYPE    203    152    160
D1071V2, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1             12              203
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TOPBP1 MUTATED        6      8      4      0
  TOPBP1 WILD-TYPE    129    116    121     60
D1071V3, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              8              116
  CLUS_3              4              121
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TOPBP1 MUTATED       13      4      1
  TOPBP1 WILD-TYPE    240     98     88
D1071V4, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TOPBP1 MUTATED        4     11      6
  TOPBP1 WILD-TYPE    160    236    137
D1071V5, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             11              236
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOPBP1 MUTATED        3      6      5      2      5
  TOPBP1 WILD-TYPE    118     98     86    119    112
D1071V6, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              6               98
  CLUS_3              5               86
  CLUS_4              2              119
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TOPBP1 MUTATED        2     15      5
  TOPBP1 WILD-TYPE    157    236    160
D1071V7, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2             15              236
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOPBP1 MUTATED        3      8      9      1      1
  TOPBP1 WILD-TYPE    115    123    142     93     80
D1071V8, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              8              123
  CLUS_3              9              142
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOPBP1 MUTATED        2      6      3      2      3
  TOPBP1 WILD-TYPE    116    130    112     38     68
D1071V9, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TOPBP1 MUTATED        2      6      5      2      1
  TOPBP1 WILD-TYPE     46    103    125     99     91
D1071V10, multiclass
        clus
vv       TOPBP1 MUTATED TOPBP1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              6              103
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1072) Variable = CSF3R MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSF3R MUTATED        5      1      1     10
  CSF3R WILD-TYPE    130     91    171    166
D1072V1, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             5             130
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CSF3R MUTATED       14      1      0
  CSF3R WILD-TYPE    201    154    162
D1072V2, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1            14             201
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSF3R MUTATED        9      3      1      1
  CSF3R WILD-TYPE    126    121    124     59
D1072V3, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             9             126
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CSF3R MUTATED       10      2      2
  CSF3R WILD-TYPE    243    100     87
D1072V4, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1            10             243
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CSF3R MUTATED        4     10      3
  CSF3R WILD-TYPE    160    237    140
D1072V5, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             4             160
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSF3R MUTATED        1      4      8      2      2
  CSF3R WILD-TYPE    120    100     83    119    115
D1072V6, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             8              83
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CSF3R MUTATED        4     12      1
  CSF3R WILD-TYPE    155    239    164
D1072V7, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSF3R MUTATED        2     10      3      1      1
  CSF3R WILD-TYPE    116    121    148     93     80
D1072V8, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             2             116
  CLUS_2            10             121
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSF3R MUTATED        2      5      1      2      4
  CSF3R WILD-TYPE    116    131    114     38     67
D1072V9, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSF3R MUTATED        2      6      4      1      1
  CSF3R WILD-TYPE     46    103    126    100     91
D1072V10, multiclass
        clus
vv       CSF3R MUTATED CSF3R WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1073) Variable = LRP4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRP4 MUTATED        4      5      3     13
  LRP4 WILD-TYPE    131     87    169    163
D1073V1, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5             87
  CLUS_3            3            169
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LRP4 MUTATED       13      5      5
  LRP4 WILD-TYPE    202    150    157
D1073V2, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1           13            202
  CLUS_2            5            150
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRP4 MUTATED        6      8      5      1
  LRP4 WILD-TYPE    129    116    120     59
D1073V3, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            8            116
  CLUS_3            5            120
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LRP4 MUTATED       10      5      5
  LRP4 WILD-TYPE    243     97     84
D1073V4, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            5             97
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LRP4 MUTATED        2     14      8
  LRP4 WILD-TYPE    162    233    135
D1073V5, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            2            162
  CLUS_2           14            233
  CLUS_3            8            135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP4 MUTATED        2      7      8      2      5
  LRP4 WILD-TYPE    119     97     83    119    112
D1073V6, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            7             97
  CLUS_3            8             83
  CLUS_4            2            119
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  LRP4 MUTATED        4     14      7
  LRP4 WILD-TYPE    155    237    158
D1073V7, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            4            155
  CLUS_2           14            237
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP4 MUTATED       10      5      4      2      4
  LRP4 WILD-TYPE    108    126    147     92     77
D1073V8, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1           10            108
  CLUS_2            5            126
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP4 MUTATED        2     12      4      0      4
  LRP4 WILD-TYPE    116    124    111     40     67
D1073V9, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           12            124
  CLUS_3            4            111
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRP4 MUTATED        1     10      6      3      2
  LRP4 WILD-TYPE     47     99    124     98     90
D1073V10, multiclass
        clus
vv       LRP4 MUTATED LRP4 WILD-TYPE
  CLUS_1            1             47
  CLUS_2           10             99
  CLUS_3            6            124
  CLUS_4            3             98
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1074) Variable = UGDH MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGDH MUTATED        0      0      3      8
  UGDH WILD-TYPE    135     92    169    168
D1074V1, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            3            169
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGDH MUTATED        5      1      2
  UGDH WILD-TYPE    210    154    160
D1074V2, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UGDH MUTATED        2      7      0      1
  UGDH WILD-TYPE    133    117    125     59
D1074V3, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            2            133
  CLUS_2            7            117
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGDH MUTATED        5      5      0
  UGDH WILD-TYPE    248     97     89
D1074V4, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            5            248
  CLUS_2            5             97
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGDH MUTATED        1      4      4
  UGDH WILD-TYPE    163    243    139
D1074V5, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            1            163
  CLUS_2            4            243
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGDH MUTATED        0      0      5      2      2
  UGDH WILD-TYPE    121    104     86    119    115
D1074V6, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UGDH MUTATED        1      6      4
  UGDH WILD-TYPE    158    245    161
D1074V7, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGDH MUTATED        1      3      4      2      1
  UGDH WILD-TYPE    117    128    147     92     80
D1074V8, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGDH MUTATED        1      3      2      0      2
  UGDH WILD-TYPE    117    133    113     40     69
D1074V9, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UGDH MUTATED        0      4      1      1      2
  UGDH WILD-TYPE     48    105    129    100     90
D1074V10, multiclass
        clus
vv       UGDH MUTATED UGDH WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1075) Variable = C1QA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1QA MUTATED        0      0      0      5
  C1QA WILD-TYPE    135     92    172    171
D1075V1, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1QA MUTATED        3      0      2
  C1QA WILD-TYPE    212    155    160
D1075V2, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C1QA MUTATED        0      3      0      0
  C1QA WILD-TYPE    135    121    125     60
D1075V3, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1QA MUTATED        2      1      0
  C1QA WILD-TYPE    251    101     89
D1075V4, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            2            251
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1QA MUTATED        1      2      1
  C1QA WILD-TYPE    163    245    142
D1075V5, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1QA MUTATED        0      0      3      0      1
  C1QA WILD-TYPE    121    104     88    121    116
D1075V6, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  C1QA MUTATED        0      3      2
  C1QA WILD-TYPE    159    248    163
D1075V7, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0            159
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1QA MUTATED        0      2      2      0      1
  C1QA WILD-TYPE    118    129    149     94     80
D1075V8, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1QA MUTATED        0      2      0      0      3
  C1QA WILD-TYPE    118    134    115     40     68
D1075V9, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C1QA MUTATED        0      2      2      1      0
  C1QA WILD-TYPE     48    107    128    100     92
D1075V10, multiclass
        clus
vv       C1QA MUTATED C1QA WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1076) Variable = ZC3H3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H3 MUTATED        5      0      4     13
  ZC3H3 WILD-TYPE    130     92    168    163
D1076V1, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H3 MUTATED       16      3      0
  ZC3H3 WILD-TYPE    199    152    162
D1076V2, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1            16             199
  CLUS_2             3             152
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H3 MUTATED        9      4      3      2
  ZC3H3 WILD-TYPE    126    120    122     58
D1076V3, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H3 MUTATED       11      4      3
  ZC3H3 WILD-TYPE    242     98     86
D1076V4, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H3 MUTATED        5     13      4
  ZC3H3 WILD-TYPE    159    234    139
D1076V5, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            13             234
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H3 MUTATED        2      4      9      4      3
  ZC3H3 WILD-TYPE    119    100     82    117    114
D1076V6, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             9              82
  CLUS_4             4             117
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H3 MUTATED        5     14      3
  ZC3H3 WILD-TYPE    154    237    162
D1076V7, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            14             237
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H3 MUTATED        1     14      4      2      1
  ZC3H3 WILD-TYPE    117    117    147     92     80
D1076V8, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2            14             117
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H3 MUTATED        3      6      2      1      2
  ZC3H3 WILD-TYPE    115    130    113     39     69
D1076V9, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             130
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H3 MUTATED        1      7      4      0      2
  ZC3H3 WILD-TYPE     47    102    126    101     90
D1076V10, multiclass
        clus
vv       ZC3H3 MUTATED ZC3H3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1077) Variable = CHMP7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHMP7 MUTATED        0      2      0      4
  CHMP7 WILD-TYPE    135     90    172    172
D1077V1, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHMP7 MUTATED        2      1      1
  CHMP7 WILD-TYPE    213    154    161
D1077V2, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHMP7 MUTATED        1      3      1      1
  CHMP7 WILD-TYPE    134    121    124     59
D1077V3, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHMP7 MUTATED        4      1      1
  CHMP7 WILD-TYPE    249    101     88
D1077V4, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHMP7 MUTATED        0      4      1
  CHMP7 WILD-TYPE    164    243    142
D1077V5, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHMP7 MUTATED        1      2      1      0      1
  CHMP7 WILD-TYPE    120    102     90    121    116
D1077V6, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             1              90
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHMP7 MUTATED        1      3      2
  CHMP7 WILD-TYPE    158    248    163
D1077V7, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             3             248
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHMP7 MUTATED        1      2      2      0      1
  CHMP7 WILD-TYPE    117    129    149     94     80
D1077V8, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHMP7 MUTATED        0      3      0      0      1
  CHMP7 WILD-TYPE    118    133    115     40     70
D1077V9, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHMP7 MUTATED        0      3      0      1      0
  CHMP7 WILD-TYPE     48    106    130    100     92
D1077V10, multiclass
        clus
vv       CHMP7 MUTATED CHMP7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1078) Variable = PTPRT MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPRT MUTATED       12     10     11     24
  PTPRT WILD-TYPE    123     82    161    152
D1078V1, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            12             123
  CLUS_2            10              82
  CLUS_3            11             161
  CLUS_4            24             152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRT MUTATED       26     12     11
  PTPRT WILD-TYPE    189    143    151
D1078V2, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            26             189
  CLUS_2            12             143
  CLUS_3            11             151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPRT MUTATED       13     22      8      5
  PTPRT WILD-TYPE    122    102    117     55
D1078V3, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            13             122
  CLUS_2            22             102
  CLUS_3             8             117
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRT MUTATED       28     15      5
  PTPRT WILD-TYPE    225     87     84
D1078V4, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            28             225
  CLUS_2            15              87
  CLUS_3             5              84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRT MUTATED       14     32      9
  PTPRT WILD-TYPE    150    215    134
D1078V5, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            14             150
  CLUS_2            32             215
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRT MUTATED        8     13     17      8      9
  PTPRT WILD-TYPE    113     91     74    113    108
D1078V6, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1             8             113
  CLUS_2            13              91
  CLUS_3            17              74
  CLUS_4             8             113
  CLUS_5             9             108
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PTPRT MUTATED       13     30     13
  PTPRT WILD-TYPE    146    221    152
D1078V7, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            13             146
  CLUS_2            30             221
  CLUS_3            13             152
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRT MUTATED       14     16     15      6      5
  PTPRT WILD-TYPE    104    115    136     88     76
D1078V8, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            14             104
  CLUS_2            16             115
  CLUS_3            15             136
  CLUS_4             6              88
  CLUS_5             5              76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRT MUTATED       10     13      5      5      9
  PTPRT WILD-TYPE    108    123    110     35     62
D1078V9, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1            10             108
  CLUS_2            13             123
  CLUS_3             5             110
  CLUS_4             5              35
  CLUS_5             9              62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPRT MUTATED        5     11     13      7      6
  PTPRT WILD-TYPE     43     98    117     94     86
D1078V10, multiclass
        clus
vv       PTPRT MUTATED PTPRT WILD-TYPE
  CLUS_1             5              43
  CLUS_2            11              98
  CLUS_3            13             117
  CLUS_4             7              94
  CLUS_5             6              86
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1079) Variable = ZNF687 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF687 MUTATED        1      0      0     13
  ZNF687 WILD-TYPE    134     92    172    163
D1079V1, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4             13              163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF687 MUTATED       10      0      1
  ZNF687 WILD-TYPE    205    155    161
D1079V2, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF687 MUTATED        3      6      1      1
  ZNF687 WILD-TYPE    132    118    124     59
D1079V3, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF687 MUTATED        6      4      1
  ZNF687 WILD-TYPE    247     98     88
D1079V4, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              6              247
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF687 MUTATED        2     10      2
  ZNF687 WILD-TYPE    162    237    141
D1079V5, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             10              237
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF687 MUTATED        1      2      9      0      2
  ZNF687 WILD-TYPE    120    102     82    121    115
D1079V6, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              9               82
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF687 MUTATED        1     10      3
  ZNF687 WILD-TYPE    158    241    162
D1079V7, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             10              241
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF687 MUTATED        2      8      4      0      0
  ZNF687 WILD-TYPE    116    123    147     94     81
D1079V8, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              8              123
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF687 MUTATED        0      6      1      2      2
  ZNF687 WILD-TYPE    118    130    114     38     69
D1079V9, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              130
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF687 MUTATED        2      6      3      0      0
  ZNF687 WILD-TYPE     46    103    127    101     92
D1079V10, multiclass
        clus
vv       ZNF687 MUTATED ZNF687 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              6              103
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1080) Variable = FAM111A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM111A MUTATED        2      3      3      5
  FAM111A WILD-TYPE    133     89    169    171
D1080V1, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3                89
  CLUS_3               3               169
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM111A MUTATED        7      2      0
  FAM111A WILD-TYPE    208    153    162
D1080V2, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               7               208
  CLUS_2               2               153
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM111A MUTATED        8      0      2      1
  FAM111A WILD-TYPE    127    124    123     59
D1080V3, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               8               127
  CLUS_2               0               124
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM111A MUTATED        9      0      2
  FAM111A WILD-TYPE    244    102     87
D1080V4, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               9               244
  CLUS_2               0               102
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM111A MUTATED        5      6      2
  FAM111A WILD-TYPE    159    241    141
D1080V5, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               5               159
  CLUS_2               6               241
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM111A MUTATED        4      3      3      2      1
  FAM111A WILD-TYPE    117    101     88    119    116
D1080V6, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               4               117
  CLUS_2               3               101
  CLUS_3               3                88
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM111A MUTATED        3      8      2
  FAM111A WILD-TYPE    156    243    163
D1080V7, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               3               156
  CLUS_2               8               243
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM111A MUTATED        2      7      0      2      2
  FAM111A WILD-TYPE    116    124    151     92     79
D1080V8, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               2               116
  CLUS_2               7               124
  CLUS_3               0               151
  CLUS_4               2                92
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM111A MUTATED        2      3      1      1      0
  FAM111A WILD-TYPE    116    133    114     39     71
D1080V9, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               2               116
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM111A MUTATED        1      3      1      0      2
  FAM111A WILD-TYPE     47    106    129    101     90
D1080V10, multiclass
        clus
vv       FAM111A MUTATED FAM111A WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               1               129
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1081) Variable = INTS8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INTS8 MUTATED        3      1      4     12
  INTS8 WILD-TYPE    132     91    168    164
D1081V1, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INTS8 MUTATED        7      3      3
  INTS8 WILD-TYPE    208    152    159
D1081V2, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INTS8 MUTATED        3      9      3      1
  INTS8 WILD-TYPE    132    115    122     59
D1081V3, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             9             115
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INTS8 MUTATED        7      6      3
  INTS8 WILD-TYPE    246     96     86
D1081V4, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             6              96
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INTS8 MUTATED        4      9      6
  INTS8 WILD-TYPE    160    238    137
D1081V5, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             9             238
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS8 MUTATED        2      5      7      2      3
  INTS8 WILD-TYPE    119     99     84    119    114
D1081V6, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             5              99
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INTS8 MUTATED        3     13      4
  INTS8 WILD-TYPE    156    238    161
D1081V7, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            13             238
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS8 MUTATED        4      8      7      1      0
  INTS8 WILD-TYPE    114    123    144     93     81
D1081V8, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             123
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS8 MUTATED        2      7      1      0      2
  INTS8 WILD-TYPE    116    129    114     40     69
D1081V9, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             7             129
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INTS8 MUTATED        2      7      2      0      1
  INTS8 WILD-TYPE     46    102    128    101     91
D1081V10, multiclass
        clus
vv       INTS8 MUTATED INTS8 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1082) Variable = IL1R2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL1R2 MUTATED        2      1      1      8
  IL1R2 WILD-TYPE    133     91    171    168
D1082V1, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1R2 MUTATED        9      1      2
  IL1R2 WILD-TYPE    206    154    160
D1082V2, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL1R2 MUTATED        3      4      3      0
  IL1R2 WILD-TYPE    132    120    122     60
D1082V3, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1R2 MUTATED        9      0      1
  IL1R2 WILD-TYPE    244    102     88
D1082V4, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1R2 MUTATED        2      7      3
  IL1R2 WILD-TYPE    162    240    140
D1082V5, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1R2 MUTATED        1      1      7      1      2
  IL1R2 WILD-TYPE    120    103     84    120    115
D1082V6, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1R2 MUTATED        1      8      3
  IL1R2 WILD-TYPE    158    243    162
D1082V7, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1R2 MUTATED        1      6      1      1      3
  IL1R2 WILD-TYPE    117    125    150     93     78
D1082V8, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             1             150
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1R2 MUTATED        1      5      1      3      2
  IL1R2 WILD-TYPE    117    131    114     37     69
D1082V9, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             1             114
  CLUS_4             3              37
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1R2 MUTATED        1      6      1      3      1
  IL1R2 WILD-TYPE     47    103    129     98     91
D1082V10, multiclass
        clus
vv       IL1R2 MUTATED IL1R2 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             1             129
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1083) Variable = ALCAM MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALCAM MUTATED        1      0      3     10
  ALCAM WILD-TYPE    134     92    169    166
D1083V1, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             3             169
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALCAM MUTATED        6      3      2
  ALCAM WILD-TYPE    209    152    160
D1083V2, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             6             209
  CLUS_2             3             152
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ALCAM MUTATED        4      7      0      1
  ALCAM WILD-TYPE    131    117    125     59
D1083V3, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             4             131
  CLUS_2             7             117
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALCAM MUTATED        7      5      0
  ALCAM WILD-TYPE    246     97     89
D1083V4, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             7             246
  CLUS_2             5              97
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALCAM MUTATED        2      6      3
  ALCAM WILD-TYPE    162    241    140
D1083V5, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALCAM MUTATED        1      0      5      0      5
  ALCAM WILD-TYPE    120    104     86    121    112
D1083V6, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ALCAM MUTATED        1     11      2
  ALCAM WILD-TYPE    158    240    163
D1083V7, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             1             158
  CLUS_2            11             240
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALCAM MUTATED        2      5      6      1      0
  ALCAM WILD-TYPE    116    126    145     93     81
D1083V8, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             6             145
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALCAM MUTATED        1      3      1      0      6
  ALCAM WILD-TYPE    117    133    114     40     65
D1083V9, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ALCAM MUTATED        0      5      4      1      1
  ALCAM WILD-TYPE     48    104    126    100     91
D1083V10, multiclass
        clus
vv       ALCAM MUTATED ALCAM WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1084) Variable = TIA1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIA1 MUTATED        0      0      1      5
  TIA1 WILD-TYPE    135     92    171    171
D1084V1, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIA1 MUTATED        5      1      0
  TIA1 WILD-TYPE    210    154    162
D1084V2, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TIA1 MUTATED        5      1      0      0
  TIA1 WILD-TYPE    130    123    125     60
D1084V3, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIA1 MUTATED        6      0      0
  TIA1 WILD-TYPE    247    102     89
D1084V4, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIA1 MUTATED        2      3      1
  TIA1 WILD-TYPE    162    244    142
D1084V5, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIA1 MUTATED        0      0      4      1      1
  TIA1 WILD-TYPE    121    104     87    120    116
D1084V6, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            0            104
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TIA1 MUTATED        1      4      1
  TIA1 WILD-TYPE    158    247    164
D1084V7, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIA1 MUTATED        0      3      1      1      1
  TIA1 WILD-TYPE    118    128    150     93     80
D1084V8, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            1            150
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIA1 MUTATED        1      1      1      1      1
  TIA1 WILD-TYPE    117    135    114     39     70
D1084V9, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TIA1 MUTATED        1      1      1      1      1
  TIA1 WILD-TYPE     47    108    129    100     91
D1084V10, multiclass
        clus
vv       TIA1 MUTATED TIA1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1085) Variable = C6ORF72 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C6ORF72 MUTATED        1      2      2      3
  C6ORF72 WILD-TYPE    134     90    170    173
D1085V1, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               2               170
  CLUS_4               3               173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C6ORF72 MUTATED        2      4      2
  C6ORF72 WILD-TYPE    213    151    160
D1085V2, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               2               213
  CLUS_2               4               151
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C6ORF72 MUTATED        3      1      1      1
  C6ORF72 WILD-TYPE    132    123    124     59
D1085V3, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1               123
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C6ORF72 MUTATED        5      0      1
  C6ORF72 WILD-TYPE    248    102     88
D1085V4, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               0               102
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C6ORF72 MUTATED        2      4      2
  C6ORF72 WILD-TYPE    162    243    141
D1085V5, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF72 MUTATED        1      4      0      2      1
  C6ORF72 WILD-TYPE    120    100     91    119    116
D1085V6, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               4               100
  CLUS_3               0                91
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C6ORF72 MUTATED        2      3      3
  C6ORF72 WILD-TYPE    157    248    162
D1085V7, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               3               248
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF72 MUTATED        2      1      4      1      0
  C6ORF72 WILD-TYPE    116    130    147     93     81
D1085V8, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               1               130
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF72 MUTATED        2      2      2      0      2
  C6ORF72 WILD-TYPE    116    134    113     40     69
D1085V9, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C6ORF72 MUTATED        0      3      3      1      1
  C6ORF72 WILD-TYPE     48    106    127    100     91
D1085V10, multiclass
        clus
vv       C6ORF72 MUTATED C6ORF72 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1086) Variable = DEK MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEK MUTATED        2      0      1      6
  DEK WILD-TYPE    133     92    171    170
D1086V1, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           2           133
  CLUS_2           0            92
  CLUS_3           1           171
  CLUS_4           6           170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DEK MUTATED        5      1      3
  DEK WILD-TYPE    210    154    159
D1086V2, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           5           210
  CLUS_2           1           154
  CLUS_3           3           159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DEK MUTATED        5      3      0      1
  DEK WILD-TYPE    130    121    125     59
D1086V3, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           5           130
  CLUS_2           3           121
  CLUS_3           0           125
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DEK MUTATED        6      3      0
  DEK WILD-TYPE    247     99     89
D1086V4, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           6           247
  CLUS_2           3            99
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DEK MUTATED        3      5      0
  DEK WILD-TYPE    161    242    143
D1086V5, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           3           161
  CLUS_2           5           242
  CLUS_3           0           143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEK MUTATED        2      1      3      1      1
  DEK WILD-TYPE    119    103     88    120    116
D1086V6, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           2           119
  CLUS_2           1           103
  CLUS_3           3            88
  CLUS_4           1           120
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DEK MUTATED        1      7      1
  DEK WILD-TYPE    158    244    164
D1086V7, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           1           158
  CLUS_2           7           244
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEK MUTATED        1      4      3      1      0
  DEK WILD-TYPE    117    127    148     93     81
D1086V8, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           1           117
  CLUS_2           4           127
  CLUS_3           3           148
  CLUS_4           1            93
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEK MUTATED        0      3      0      2      2
  DEK WILD-TYPE    118    133    115     38     69
D1086V9, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           0           118
  CLUS_2           3           133
  CLUS_3           0           115
  CLUS_4           2            38
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DEK MUTATED        1      3      2      0      1
  DEK WILD-TYPE     47    106    128    101     91
D1086V10, multiclass
        clus
vv       DEK MUTATED DEK WILD-TYPE
  CLUS_1           1            47
  CLUS_2           3           106
  CLUS_3           2           128
  CLUS_4           0           101
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1087) Variable = UBXN6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBXN6 MUTATED        1      1      1     11
  UBXN6 WILD-TYPE    134     91    171    165
D1087V1, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UBXN6 MUTATED       11      0      2
  UBXN6 WILD-TYPE    204    155    160
D1087V2, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1            11             204
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UBXN6 MUTATED        2      8      1      0
  UBXN6 WILD-TYPE    133    116    124     60
D1087V3, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             8             116
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UBXN6 MUTATED        4      7      0
  UBXN6 WILD-TYPE    249     95     89
D1087V4, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             7              95
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UBXN6 MUTATED        0      9      4
  UBXN6 WILD-TYPE    164    238    139
D1087V5, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             9             238
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBXN6 MUTATED        1      2      7      0      3
  UBXN6 WILD-TYPE    120    102     84    121    114
D1087V6, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  UBXN6 MUTATED        1     12      1
  UBXN6 WILD-TYPE    158    239    164
D1087V7, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBXN6 MUTATED        0      8      6      0      0
  UBXN6 WILD-TYPE    118    123    145     94     81
D1087V8, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             123
  CLUS_3             6             145
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBXN6 MUTATED        0      6      1      1      3
  UBXN6 WILD-TYPE    118    130    114     39     68
D1087V9, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UBXN6 MUTATED        0      5      6      0      0
  UBXN6 WILD-TYPE     48    104    124    101     92
D1087V10, multiclass
        clus
vv       UBXN6 MUTATED UBXN6 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1088) Variable = FGF13 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF13 MUTATED        3      1      3     12
  FGF13 WILD-TYPE    132     91    169    164
D1088V1, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FGF13 MUTATED       12      3      2
  FGF13 WILD-TYPE    203    152    160
D1088V2, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             3             152
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FGF13 MUTATED        4      5      3      3
  FGF13 WILD-TYPE    131    119    122     57
D1088V3, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             5             119
  CLUS_3             3             122
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FGF13 MUTATED        9      4      2
  FGF13 WILD-TYPE    244     98     87
D1088V4, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FGF13 MUTATED        3     10      6
  FGF13 WILD-TYPE    161    237    137
D1088V5, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            10             237
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF13 MUTATED        2      4      5      3      5
  FGF13 WILD-TYPE    119    100     86    118    112
D1088V6, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3             5              86
  CLUS_4             3             118
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  FGF13 MUTATED        4     12      3
  FGF13 WILD-TYPE    155    239    162
D1088V7, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF13 MUTATED        1      8      9      1      0
  FGF13 WILD-TYPE    117    123    142     93     81
D1088V8, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             9             142
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF13 MUTATED        4      4      1      2      4
  FGF13 WILD-TYPE    114    132    114     38     67
D1088V9, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FGF13 MUTATED        0      5      7      2      1
  FGF13 WILD-TYPE     48    104    123     99     91
D1088V10, multiclass
        clus
vv       FGF13 MUTATED FGF13 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1089) Variable = CHD1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHD1 MUTATED        2      3      5     10
  CHD1 WILD-TYPE    133     89    167    166
D1089V1, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3             89
  CLUS_3            5            167
  CLUS_4           10            166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD1 MUTATED        7      5      5
  CHD1 WILD-TYPE    208    150    157
D1089V2, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            5            150
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHD1 MUTATED        7      3      1      4
  CHD1 WILD-TYPE    128    121    124     56
D1089V3, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            7            128
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            4             56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD1 MUTATED       13      2      0
  CHD1 WILD-TYPE    240    100     89
D1089V4, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD1 MUTATED        5     10      3
  CHD1 WILD-TYPE    159    237    140
D1089V5, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            5            159
  CLUS_2           10            237
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD1 MUTATED        2      5      5      4      2
  CHD1 WILD-TYPE    119     99     86    117    115
D1089V6, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            5             99
  CLUS_3            5             86
  CLUS_4            4            117
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CHD1 MUTATED        3     11      6
  CHD1 WILD-TYPE    156    240    159
D1089V7, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           11            240
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD1 MUTATED        1      6      7      4      2
  CHD1 WILD-TYPE    117    125    144     90     79
D1089V8, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            125
  CLUS_3            7            144
  CLUS_4            4             90
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD1 MUTATED        3      5      4      1      4
  CHD1 WILD-TYPE    115    131    111     39     67
D1089V9, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            131
  CLUS_3            4            111
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHD1 MUTATED        1      4      5      3      4
  CHD1 WILD-TYPE     47    105    125     98     88
D1089V10, multiclass
        clus
vv       CHD1 MUTATED CHD1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            5            125
  CLUS_4            3             98
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1090) Variable = SLC30A5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC30A5 MUTATED        2      0      1      5
  SLC30A5 WILD-TYPE    133     92    171    171
D1090V1, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC30A5 MUTATED        5      1      1
  SLC30A5 WILD-TYPE    210    154    161
D1090V2, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC30A5 MUTATED        0      2      0      2
  SLC30A5 WILD-TYPE    135    122    125     58
D1090V3, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC30A5 MUTATED        3      1      0
  SLC30A5 WILD-TYPE    250    101     89
D1090V4, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC30A5 MUTATED        2      5      1
  SLC30A5 WILD-TYPE    162    242    142
D1090V5, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               5               242
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC30A5 MUTATED        1      3      1      1      2
  SLC30A5 WILD-TYPE    120    101     90    120    115
D1090V6, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               3               101
  CLUS_3               1                90
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SLC30A5 MUTATED        2      5      1
  SLC30A5 WILD-TYPE    157    246    164
D1090V7, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               5               246
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC30A5 MUTATED        2      2      2      1      1
  SLC30A5 WILD-TYPE    116    129    149     93     80
D1090V8, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               129
  CLUS_3               2               149
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC30A5 MUTATED        1      1      1      1      1
  SLC30A5 WILD-TYPE    117    135    114     39     70
D1090V9, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               135
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC30A5 MUTATED        1      1      1      1      1
  SLC30A5 WILD-TYPE     47    108    129    100     91
D1090V10, multiclass
        clus
vv       SLC30A5 MUTATED SLC30A5 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               1               108
  CLUS_3               1               129
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1091) Variable = PHACTR2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHACTR2 MUTATED        5      2      1     10
  PHACTR2 WILD-TYPE    130     90    171    166
D1091V1, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               2                90
  CLUS_3               1               171
  CLUS_4              10               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR2 MUTATED       13      3      1
  PHACTR2 WILD-TYPE    202    152    161
D1091V2, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1              13               202
  CLUS_2               3               152
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PHACTR2 MUTATED        6      5      2      3
  PHACTR2 WILD-TYPE    129    119    123     57
D1091V3, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               5               119
  CLUS_3               2               123
  CLUS_4               3                57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR2 MUTATED        9      5      2
  PHACTR2 WILD-TYPE    244     97     87
D1091V4, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               9               244
  CLUS_2               5                97
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR2 MUTATED        3     11      4
  PHACTR2 WILD-TYPE    161    236    139
D1091V5, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               3               161
  CLUS_2              11               236
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR2 MUTATED        4      2      8      1      3
  PHACTR2 WILD-TYPE    117    102     83    120    114
D1091V6, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               4               117
  CLUS_2               2               102
  CLUS_3               8                83
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PHACTR2 MUTATED        3      9      6
  PHACTR2 WILD-TYPE    156    242    159
D1091V7, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               3               156
  CLUS_2               9               242
  CLUS_3               6               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR2 MUTATED        3      8      3      1      3
  PHACTR2 WILD-TYPE    115    123    148     93     78
D1091V8, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               8               123
  CLUS_3               3               148
  CLUS_4               1                93
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR2 MUTATED        1      5      5      1      2
  PHACTR2 WILD-TYPE    117    131    110     39     69
D1091V9, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               131
  CLUS_3               5               110
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PHACTR2 MUTATED        2      4      4      3      1
  PHACTR2 WILD-TYPE     46    105    126     98     91
D1091V10, multiclass
        clus
vv       PHACTR2 MUTATED PHACTR2 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               4               105
  CLUS_3               4               126
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1092) Variable = YIF1A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YIF1A MUTATED        1      1      0      3
  YIF1A WILD-TYPE    134     91    172    173
D1092V1, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIF1A MUTATED        3      1      0
  YIF1A WILD-TYPE    212    154    162
D1092V2, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  YIF1A MUTATED        3      1      1      0
  YIF1A WILD-TYPE    132    123    124     60
D1092V3, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIF1A MUTATED        4      1      0
  YIF1A WILD-TYPE    249    101     89
D1092V4, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIF1A MUTATED        1      3      1
  YIF1A WILD-TYPE    163    244    142
D1092V5, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIF1A MUTATED        2      0      3      0      0
  YIF1A WILD-TYPE    119    104     88    121    117
D1092V6, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  YIF1A MUTATED        1      2      2
  YIF1A WILD-TYPE    158    249    163
D1092V7, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             1             158
  CLUS_2             2             249
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIF1A MUTATED        1      1      2      0      1
  YIF1A WILD-TYPE    117    130    149     94     80
D1092V8, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             130
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIF1A MUTATED        1      2      1      0      0
  YIF1A WILD-TYPE    117    134    114     40     71
D1092V9, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  YIF1A MUTATED        1      1      1      1      0
  YIF1A WILD-TYPE     47    108    129    100     92
D1092V10, multiclass
        clus
vv       YIF1A MUTATED YIF1A WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1093) Variable = ARID3A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID3A MUTATED        0      1      0      5
  ARID3A WILD-TYPE    135     91    172    171
D1093V1, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID3A MUTATED        5      0      1
  ARID3A WILD-TYPE    210    155    161
D1093V2, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID3A MUTATED        1      1      0      2
  ARID3A WILD-TYPE    134    123    125     58
D1093V3, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1              123
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID3A MUTATED        3      0      1
  ARID3A WILD-TYPE    250    102     88
D1093V4, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              3              250
  CLUS_2              0              102
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID3A MUTATED        1      4      1
  ARID3A WILD-TYPE    163    243    142
D1093V5, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              1              163
  CLUS_2              4              243
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID3A MUTATED        0      2      2      1      1
  ARID3A WILD-TYPE    121    102     89    120    116
D1093V6, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              2               89
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID3A MUTATED        0      5      1
  ARID3A WILD-TYPE    159    246    164
D1093V7, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID3A MUTATED        0      3      3      0      0
  ARID3A WILD-TYPE    118    128    148     94     81
D1093V8, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              128
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID3A MUTATED        0      2      1      0      2
  ARID3A WILD-TYPE    118    134    114     40     69
D1093V9, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID3A MUTATED        0      2      3      0      0
  ARID3A WILD-TYPE     48    107    127    101     92
D1093V10, multiclass
        clus
vv       ARID3A MUTATED ARID3A WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1094) Variable = IRF2BP2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRF2BP2 MUTATED        2      1      0      4
  IRF2BP2 WILD-TYPE    133     91    172    172
D1094V1, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IRF2BP2 MUTATED        5      0      2
  IRF2BP2 WILD-TYPE    210    155    160
D1094V2, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IRF2BP2 MUTATED        1      1      2      2
  IRF2BP2 WILD-TYPE    134    123    123     58
D1094V3, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1               123
  CLUS_3               2               123
  CLUS_4               2                58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IRF2BP2 MUTATED        3      1      2
  IRF2BP2 WILD-TYPE    250    101     87
D1094V4, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IRF2BP2 MUTATED        1      4      2
  IRF2BP2 WILD-TYPE    163    243    141
D1094V5, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2BP2 MUTATED        0      0      3      1      3
  IRF2BP2 WILD-TYPE    121    104     88    120    114
D1094V6, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               3                88
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  IRF2BP2 MUTATED        0      4      3
  IRF2BP2 WILD-TYPE    159    247    162
D1094V7, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               4               247
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2BP2 MUTATED        0      3      1      0      3
  IRF2BP2 WILD-TYPE    118    128    150     94     78
D1094V8, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               3                78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2BP2 MUTATED        0      3      3      1      0
  IRF2BP2 WILD-TYPE    118    133    112     39     71
D1094V9, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               3               112
  CLUS_4               1                39
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IRF2BP2 MUTATED        0      3      3      1      0
  IRF2BP2 WILD-TYPE     48    106    127    100     92
D1094V10, multiclass
        clus
vv       IRF2BP2 MUTATED IRF2BP2 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1095) Variable = ABCF3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCF3 MUTATED        1      0      1     10
  ABCF3 WILD-TYPE    134     92    171    166
D1095V1, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCF3 MUTATED        7      3      1
  ABCF3 WILD-TYPE    208    152    161
D1095V2, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             3             152
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCF3 MUTATED        4      4      0      2
  ABCF3 WILD-TYPE    131    120    125     58
D1095V3, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCF3 MUTATED        6      3      1
  ABCF3 WILD-TYPE    247     99     88
D1095V4, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCF3 MUTATED        2      7      3
  ABCF3 WILD-TYPE    162    240    140
D1095V5, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCF3 MUTATED        2      2      6      1      1
  ABCF3 WILD-TYPE    119    102     85    120    116
D1095V6, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCF3 MUTATED        3      9      1
  ABCF3 WILD-TYPE    156    242    164
D1095V7, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             9             242
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCF3 MUTATED        0      7      4      2      0
  ABCF3 WILD-TYPE    118    124    147     92     81
D1095V8, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCF3 MUTATED        2      5      0      0      2
  ABCF3 WILD-TYPE    116    131    115     40     69
D1095V9, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCF3 MUTATED        0      5      2      0      2
  ABCF3 WILD-TYPE     48    104    128    101     90
D1095V10, multiclass
        clus
vv       ABCF3 MUTATED ABCF3 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1096) Variable = DTNBP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DTNBP1 MUTATED        1      0      0      6
  DTNBP1 WILD-TYPE    134     92    172    170
D1096V1, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DTNBP1 MUTATED        3      0      2
  DTNBP1 WILD-TYPE    212    155    160
D1096V2, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DTNBP1 MUTATED        2      3      1      1
  DTNBP1 WILD-TYPE    133    121    124     59
D1096V3, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DTNBP1 MUTATED        2      2      3
  DTNBP1 WILD-TYPE    251    100     86
D1096V4, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              2              100
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DTNBP1 MUTATED        1      3      3
  DTNBP1 WILD-TYPE    163    244    140
D1096V5, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTNBP1 MUTATED        1      1      3      0      2
  DTNBP1 WILD-TYPE    120    103     88    121    115
D1096V6, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DTNBP1 MUTATED        2      5      0
  DTNBP1 WILD-TYPE    157    246    165
D1096V7, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTNBP1 MUTATED        1      2      3      1      0
  DTNBP1 WILD-TYPE    117    129    148     93     81
D1096V8, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              129
  CLUS_3              3              148
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTNBP1 MUTATED        0      2      0      1      2
  DTNBP1 WILD-TYPE    118    134    115     39     69
D1096V9, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DTNBP1 MUTATED        0      1      3      0      1
  DTNBP1 WILD-TYPE     48    108    127    101     91
D1096V10, multiclass
        clus
vv       DTNBP1 MUTATED DTNBP1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1097) Variable = CHST15 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHST15 MUTATED        1      1      3     12
  CHST15 WILD-TYPE    134     91    169    164
D1097V1, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHST15 MUTATED       10      2      1
  CHST15 WILD-TYPE    205    153    161
D1097V2, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1             10              205
  CLUS_2              2              153
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHST15 MUTATED        3      8      2      2
  CHST15 WILD-TYPE    132    116    123     58
D1097V3, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              8              116
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHST15 MUTATED        9      5      1
  CHST15 WILD-TYPE    244     97     88
D1097V4, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              5               97
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHST15 MUTATED        1      9      5
  CHST15 WILD-TYPE    163    238    138
D1097V5, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              9              238
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST15 MUTATED        3      5      3      0      4
  CHST15 WILD-TYPE    118     99     88    121    113
D1097V6, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              5               99
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CHST15 MUTATED        3     12      2
  CHST15 WILD-TYPE    156    239    163
D1097V7, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             12              239
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST15 MUTATED        3      5      6      0      3
  CHST15 WILD-TYPE    115    126    145     94     78
D1097V8, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              126
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST15 MUTATED        3      3      2      0      4
  CHST15 WILD-TYPE    115    133    113     40     67
D1097V9, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              3              133
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST15 MUTATED        3      2      5      2      0
  CHST15 WILD-TYPE     45    107    125     99     92
D1097V10, multiclass
        clus
vv       CHST15 MUTATED CHST15 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              2              107
  CLUS_3              5              125
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1098) Variable = SI MUTATION ANALYSIS
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SI MUTATED        9      9     11     19
  SI WILD-TYPE    126     83    161    157
D1098V1, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1          9          126
  CLUS_2          9           83
  CLUS_3         11          161
  CLUS_4         19          157
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  SI MUTATED       23     14      8
  SI WILD-TYPE    192    141    154
D1098V2, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         23          192
  CLUS_2         14          141
  CLUS_3          8          154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SI MUTATED       12     15      7      2
  SI WILD-TYPE    123    109    118     58
D1098V3, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         12          123
  CLUS_2         15          109
  CLUS_3          7          118
  CLUS_4          2           58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  SI MUTATED       22      8      6
  SI WILD-TYPE    231     94     83
D1098V4, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         22          231
  CLUS_2          8           94
  CLUS_3          6           83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  SI MUTATED       13     27      6
  SI WILD-TYPE    151    220    137
D1098V5, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         13          151
  CLUS_2         27          220
  CLUS_3          6          137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SI MUTATED       11      9     15      7      4
  SI WILD-TYPE    110     95     76    114    113
D1098V6, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         11          110
  CLUS_2          9           95
  CLUS_3         15           76
  CLUS_4          7          114
  CLUS_5          4          113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3
  SI MUTATED       13     26      9
  SI WILD-TYPE    146    225    156
D1098V7, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         13          146
  CLUS_2         26          225
  CLUS_3          9          156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SI MUTATED       14     14     12      5      3
  SI WILD-TYPE    104    117    139     89     78
D1098V8, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         14          104
  CLUS_2         14          117
  CLUS_3         12          139
  CLUS_4          5           89
  CLUS_5          3           78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SI MUTATED       11     13      5      2     11
  SI WILD-TYPE    107    123    110     38     60
D1098V9, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         11          107
  CLUS_2         13          123
  CLUS_3          5          110
  CLUS_4          2           38
  CLUS_5         11           60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
              vv
clus           CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SI MUTATED       11     10     12      4      5
  SI WILD-TYPE     37     99    118     97     87
D1098V10, multiclass
        clus
vv       SI MUTATED SI WILD-TYPE
  CLUS_1         11           37
  CLUS_2         10           99
  CLUS_3         12          118
  CLUS_4          4           97
  CLUS_5          5           87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1099) Variable = RP1L1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RP1L1 MUTATED        6      3      8     23
  RP1L1 WILD-TYPE    129     89    164    153
D1099V1, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3              89
  CLUS_3             8             164
  CLUS_4            23             153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RP1L1 MUTATED       23      4      9
  RP1L1 WILD-TYPE    192    151    153
D1099V2, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1            23             192
  CLUS_2             4             151
  CLUS_3             9             153
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RP1L1 MUTATED       12     14      2      6
  RP1L1 WILD-TYPE    123    110    123     54
D1099V3, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1            12             123
  CLUS_2            14             110
  CLUS_3             2             123
  CLUS_4             6              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RP1L1 MUTATED       25      8      1
  RP1L1 WILD-TYPE    228     94     88
D1099V4, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1            25             228
  CLUS_2             8              94
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RP1L1 MUTATED        7     22      9
  RP1L1 WILD-TYPE    157    225    134
D1099V5, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            22             225
  CLUS_3             9             134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RP1L1 MUTATED        4     12     11      4      7
  RP1L1 WILD-TYPE    117     92     80    117    110
D1099V6, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2            12              92
  CLUS_3            11              80
  CLUS_4             4             117
  CLUS_5             7             110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RP1L1 MUTATED        6     25      9
  RP1L1 WILD-TYPE    153    226    156
D1099V7, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            25             226
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RP1L1 MUTATED        5     17     11      4      3
  RP1L1 WILD-TYPE    113    114    140     90     78
D1099V8, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            17             114
  CLUS_3            11             140
  CLUS_4             4              90
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RP1L1 MUTATED        5     13      4      3      6
  RP1L1 WILD-TYPE    113    123    111     37     65
D1099V9, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            13             123
  CLUS_3             4             111
  CLUS_4             3              37
  CLUS_5             6              65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RP1L1 MUTATED        2      7     11      7      4
  RP1L1 WILD-TYPE     46    102    119     94     88
D1099V10, multiclass
        clus
vv       RP1L1 MUTATED RP1L1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             7             102
  CLUS_3            11             119
  CLUS_4             7              94
  CLUS_5             4              88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1100) Variable = ITGAL MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGAL MUTATED        6      1      6     12
  ITGAL WILD-TYPE    129     91    166    164
D1100V1, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             6             129
  CLUS_2             1              91
  CLUS_3             6             166
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAL MUTATED       17      3      3
  ITGAL WILD-TYPE    198    152    159
D1100V2, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1            17             198
  CLUS_2             3             152
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGAL MUTATED       10      4      2      3
  ITGAL WILD-TYPE    125    120    123     57
D1100V3, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1            10             125
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             3              57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAL MUTATED       14      3      2
  ITGAL WILD-TYPE    239     99     87
D1100V4, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1            14             239
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAL MUTATED        5     19      2
  ITGAL WILD-TYPE    159    228    141
D1100V5, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             5             159
  CLUS_2            19             228
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAL MUTATED        2      6     10      4      4
  ITGAL WILD-TYPE    119     98     81    117    113
D1100V6, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             2             119
  CLUS_2             6              98
  CLUS_3            10              81
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGAL MUTATED        3     20      3
  ITGAL WILD-TYPE    156    231    162
D1100V7, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             3             156
  CLUS_2            20             231
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAL MUTATED        1     15      7      2      1
  ITGAL WILD-TYPE    117    116    144     92     80
D1100V8, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             1             117
  CLUS_2            15             116
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAL MUTATED        4      8      1      2      5
  ITGAL WILD-TYPE    114    128    114     38     66
D1100V9, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             4             114
  CLUS_2             8             128
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGAL MUTATED        4      7      7      0      2
  ITGAL WILD-TYPE     44    102    123    101     90
D1100V10, multiclass
        clus
vv       ITGAL MUTATED ITGAL WILD-TYPE
  CLUS_1             4              44
  CLUS_2             7             102
  CLUS_3             7             123
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1101) Variable = PCLO MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCLO MUTATED       25     16     29     38
  PCLO WILD-TYPE    110     76    143    138
D1101V1, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           25            110
  CLUS_2           16             76
  CLUS_3           29            143
  CLUS_4           38            138
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCLO MUTATED       54     26     11
  PCLO WILD-TYPE    161    129    151
D1101V2, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           54            161
  CLUS_2           26            129
  CLUS_3           11            151
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCLO MUTATED       32     31     13      9
  PCLO WILD-TYPE    103     93    112     51
D1101V3, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           32            103
  CLUS_2           31             93
  CLUS_3           13            112
  CLUS_4            9             51
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCLO MUTATED       52     26      7
  PCLO WILD-TYPE    201     76     82
D1101V4, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           52            201
  CLUS_2           26             76
  CLUS_3            7             82
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCLO MUTATED       22     64     21
  PCLO WILD-TYPE    142    183    122
D1101V5, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           22            142
  CLUS_2           64            183
  CLUS_3           21            122
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCLO MUTATED       18     26     31     15     17
  PCLO WILD-TYPE    103     78     60    106    100
D1101V6, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           18            103
  CLUS_2           26             78
  CLUS_3           31             60
  CLUS_4           15            106
  CLUS_5           17            100
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PCLO MUTATED       26     64     18
  PCLO WILD-TYPE    133    187    147
D1101V7, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           26            133
  CLUS_2           64            187
  CLUS_3           18            147
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCLO MUTATED       22     35     32     13      6
  PCLO WILD-TYPE     96     96    119     81     75
D1101V8, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           22             96
  CLUS_2           35             96
  CLUS_3           32            119
  CLUS_4           13             81
  CLUS_5            6             75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCLO MUTATED       21     28     13      6     11
  PCLO WILD-TYPE     97    108    102     34     60
D1101V9, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           21             97
  CLUS_2           28            108
  CLUS_3           13            102
  CLUS_4            6             34
  CLUS_5           11             60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCLO MUTATED       10     28     18     10     13
  PCLO WILD-TYPE     38     81    112     91     79
D1101V10, multiclass
        clus
vv       PCLO MUTATED PCLO WILD-TYPE
  CLUS_1           10             38
  CLUS_2           28             81
  CLUS_3           18            112
  CLUS_4           10             91
  CLUS_5           13             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1102) Variable = NPR3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NPR3 MUTATED        2      0      0      9
  NPR3 WILD-TYPE    133     92    172    167
D1102V1, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NPR3 MUTATED        4      1      3
  NPR3 WILD-TYPE    211    154    159
D1102V2, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            1            154
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NPR3 MUTATED        4      5      0      1
  NPR3 WILD-TYPE    131    119    125     59
D1102V3, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NPR3 MUTATED        8      2      0
  NPR3 WILD-TYPE    245    100     89
D1102V4, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NPR3 MUTATED        2      3      5
  NPR3 WILD-TYPE    162    244    138
D1102V5, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            3            244
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPR3 MUTATED        1      2      4      0      3
  NPR3 WILD-TYPE    120    102     87    121    114
D1102V6, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NPR3 MUTATED        0      8      3
  NPR3 WILD-TYPE    159    243    162
D1102V7, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            8            243
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPR3 MUTATED        1      4      5      0      1
  NPR3 WILD-TYPE    117    127    146     94     80
D1102V8, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPR3 MUTATED        1      2      1      1      2
  NPR3 WILD-TYPE    117    134    114     39     69
D1102V9, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NPR3 MUTATED        2      2      2      1      0
  NPR3 WILD-TYPE     46    107    128    100     92
D1102V10, multiclass
        clus
vv       NPR3 MUTATED NPR3 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1103) Variable = PTPN12 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN12 MUTATED        3      1      0      9
  PTPN12 WILD-TYPE    132     91    172    167
D1103V1, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN12 MUTATED        8      1      2
  PTPN12 WILD-TYPE    207    154    160
D1103V2, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PTPN12 MUTATED        7      2      1      0
  PTPN12 WILD-TYPE    128    122    124     60
D1103V3, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN12 MUTATED        7      2      1
  PTPN12 WILD-TYPE    246    100     88
D1103V4, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN12 MUTATED        2      8      2
  PTPN12 WILD-TYPE    162    239    141
D1103V5, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              8              239
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN12 MUTATED        2      3      5      0      2
  PTPN12 WILD-TYPE    119    101     86    121    115
D1103V6, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PTPN12 MUTATED        1      8      4
  PTPN12 WILD-TYPE    158    243    161
D1103V7, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              8              243
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN12 MUTATED        2      3      6      0      2
  PTPN12 WILD-TYPE    116    128    145     94     79
D1103V8, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              3              128
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN12 MUTATED        1      4      2      2      2
  PTPN12 WILD-TYPE    117    132    113     38     69
D1103V9, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              132
  CLUS_3              2              113
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PTPN12 MUTATED        2      4      4      1      0
  PTPN12 WILD-TYPE     46    105    126    100     92
D1103V10, multiclass
        clus
vv       PTPN12 MUTATED PTPN12 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1104) Variable = MTSS1L MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTSS1L MUTATED        1      0      1      9
  MTSS1L WILD-TYPE    134     92    171    167
D1104V1, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTSS1L MUTATED        7      1      2
  MTSS1L WILD-TYPE    208    154    160
D1104V2, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              7              208
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MTSS1L MUTATED        4      4      2      0
  MTSS1L WILD-TYPE    131    120    123     60
D1104V3, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTSS1L MUTATED        6      3      1
  MTSS1L WILD-TYPE    247     99     88
D1104V4, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              6              247
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTSS1L MUTATED        0      9      3
  MTSS1L WILD-TYPE    164    238    140
D1104V5, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              0              164
  CLUS_2              9              238
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1L MUTATED        3      2      6      0      1
  MTSS1L WILD-TYPE    118    102     85    121    116
D1104V6, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              3              118
  CLUS_2              2              102
  CLUS_3              6               85
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MTSS1L MUTATED        1      9      2
  MTSS1L WILD-TYPE    158    242    163
D1104V7, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1L MUTATED        2      5      3      0      2
  MTSS1L WILD-TYPE    116    126    148     94     79
D1104V8, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              2              116
  CLUS_2              5              126
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1L MUTATED        1      2      1      1      3
  MTSS1L WILD-TYPE    117    134    114     39     68
D1104V9, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MTSS1L MUTATED        1      3      3      1      0
  MTSS1L WILD-TYPE     47    106    127    100     92
D1104V10, multiclass
        clus
vv       MTSS1L MUTATED MTSS1L WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              3              127
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1105) Variable = ABCA7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCA7 MUTATED        3      4      3     15
  ABCA7 WILD-TYPE    132     88    169    161
D1105V1, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             3             169
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA7 MUTATED       13      8      2
  ABCA7 WILD-TYPE    202    147    160
D1105V2, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             8             147
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCA7 MUTATED        9      6      3      1
  ABCA7 WILD-TYPE    126    118    122     59
D1105V3, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             9             126
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA7 MUTATED       13      3      3
  ABCA7 WILD-TYPE    240     99     86
D1105V4, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             3              99
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA7 MUTATED        7     11      6
  ABCA7 WILD-TYPE    157    236    137
D1105V5, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             7             157
  CLUS_2            11             236
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA7 MUTATED        4      5      8      3      4
  ABCA7 WILD-TYPE    117     99     83    118    113
D1105V6, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             8              83
  CLUS_4             3             118
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA7 MUTATED        7     14      4
  ABCA7 WILD-TYPE    152    237    161
D1105V7, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            14             237
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA7 MUTATED        4     10      5      3      3
  ABCA7 WILD-TYPE    114    121    146     91     78
D1105V8, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             4             114
  CLUS_2            10             121
  CLUS_3             5             146
  CLUS_4             3              91
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA7 MUTATED        5      6      3      2      4
  ABCA7 WILD-TYPE    113    130    112     38     67
D1105V9, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             6             130
  CLUS_3             3             112
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA7 MUTATED        3      8      4      2      3
  ABCA7 WILD-TYPE     45    101    126     99     89
D1105V10, multiclass
        clus
vv       ABCA7 MUTATED ABCA7 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             8             101
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1106) Variable = OR1L3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR1L3 MUTATED        2      1      1      4
  OR1L3 WILD-TYPE    133     91    171    172
D1106V1, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR1L3 MUTATED        4      1      2
  OR1L3 WILD-TYPE    211    154    160
D1106V2, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR1L3 MUTATED        3      1      1      0
  OR1L3 WILD-TYPE    132    123    124     60
D1106V3, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR1L3 MUTATED        3      1      1
  OR1L3 WILD-TYPE    250    101     88
D1106V4, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             3             250
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR1L3 MUTATED        1      7      0
  OR1L3 WILD-TYPE    163    240    143
D1106V5, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR1L3 MUTATED        0      4      4      0      0
  OR1L3 WILD-TYPE    121    100     87    121    117
D1106V6, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             4             100
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR1L3 MUTATED        1      7      0
  OR1L3 WILD-TYPE    158    244    165
D1106V7, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR1L3 MUTATED        1      4      3      0      0
  OR1L3 WILD-TYPE    117    127    148     94     81
D1106V8, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR1L3 MUTATED        1      4      0      1      0
  OR1L3 WILD-TYPE    117    132    115     39     71
D1106V9, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR1L3 MUTATED        1      2      3      0      0
  OR1L3 WILD-TYPE     47    107    127    101     92
D1106V10, multiclass
        clus
vv       OR1L3 MUTATED OR1L3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1107) Variable = HOOK1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HOOK1 MUTATED        4      0      0      7
  HOOK1 WILD-TYPE    131     92    172    169
D1107V1, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOOK1 MUTATED        8      0      2
  HOOK1 WILD-TYPE    207    155    160
D1107V2, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HOOK1 MUTATED        4      2      2      1
  HOOK1 WILD-TYPE    131    122    123     59
D1107V3, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOOK1 MUTATED        7      1      1
  HOOK1 WILD-TYPE    246    101     88
D1107V4, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOOK1 MUTATED        3      6      2
  HOOK1 WILD-TYPE    161    241    141
D1107V5, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             6             241
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOOK1 MUTATED        1      3      5      2      0
  HOOK1 WILD-TYPE    120    101     86    119    117
D1107V6, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HOOK1 MUTATED        2      8      1
  HOOK1 WILD-TYPE    157    243    164
D1107V7, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             8             243
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOOK1 MUTATED        2      5      4      0      0
  HOOK1 WILD-TYPE    116    126    147     94     81
D1107V8, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOOK1 MUTATED        3      4      0      0      2
  HOOK1 WILD-TYPE    115    132    115     40     69
D1107V9, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HOOK1 MUTATED        2      5      2      0      0
  HOOK1 WILD-TYPE     46    104    128    101     92
D1107V10, multiclass
        clus
vv       HOOK1 MUTATED HOOK1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1108) Variable = MAP7D1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP7D1 MUTATED        5      1      1     10
  MAP7D1 WILD-TYPE    130     91    171    166
D1108V1, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D1 MUTATED        9      3      2
  MAP7D1 WILD-TYPE    206    152    160
D1108V2, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP7D1 MUTATED        8      3      2      2
  MAP7D1 WILD-TYPE    127    121    123     58
D1108V3, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              8              127
  CLUS_2              3              121
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D1 MUTATED       11      1      3
  MAP7D1 WILD-TYPE    242    101     86
D1108V4, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1             11              242
  CLUS_2              1              101
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D1 MUTATED        2     10      5
  MAP7D1 WILD-TYPE    162    237    138
D1108V5, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2             10              237
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D1 MUTATED        4      3      4      1      5
  MAP7D1 WILD-TYPE    117    101     87    120    112
D1108V6, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              4              117
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  MAP7D1 MUTATED        4     10      3
  MAP7D1 WILD-TYPE    155    241    162
D1108V7, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              4              155
  CLUS_2             10              241
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D1 MUTATED        4      6      4      1      2
  MAP7D1 WILD-TYPE    114    125    147     93     79
D1108V8, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              6              125
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D1 MUTATED        3      4      1      0      4
  MAP7D1 WILD-TYPE    115    132    114     40     67
D1108V9, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP7D1 MUTATED        2      3      5      1      1
  MAP7D1 WILD-TYPE     46    106    125    100     91
D1108V10, multiclass
        clus
vv       MAP7D1 MUTATED MAP7D1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              3              106
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1109) Variable = VPRBP MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VPRBP MUTATED        1      1      0      9
  VPRBP WILD-TYPE    134     91    172    167
D1109V1, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VPRBP MUTATED        5      0      2
  VPRBP WILD-TYPE    210    155    160
D1109V2, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  VPRBP MUTATED        3      4      2      0
  VPRBP WILD-TYPE    132    120    123     60
D1109V3, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VPRBP MUTATED        6      2      1
  VPRBP WILD-TYPE    247    100     88
D1109V4, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VPRBP MUTATED        2      5      4
  VPRBP WILD-TYPE    162    242    139
D1109V5, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             2             162
  CLUS_2             5             242
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPRBP MUTATED        0      3      4      0      4
  VPRBP WILD-TYPE    121    101     87    121    113
D1109V6, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  VPRBP MUTATED        0      9      2
  VPRBP WILD-TYPE    159    242    163
D1109V7, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             0             159
  CLUS_2             9             242
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPRBP MUTATED        1      5      3      0      2
  VPRBP WILD-TYPE    117    126    148     94     79
D1109V8, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPRBP MUTATED        0      2      2      2      1
  VPRBP WILD-TYPE    118    134    113     38     70
D1109V9, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  VPRBP MUTATED        1      1      2      3      0
  VPRBP WILD-TYPE     47    108    128     98     92
D1109V10, multiclass
        clus
vv       VPRBP MUTATED VPRBP WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1110) Variable = OR2M5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2M5 MUTATED        5      4      1      6
  OR2M5 WILD-TYPE    130     88    171    170
D1110V1, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4              88
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR2M5 MUTATED        9      3      2
  OR2M5 WILD-TYPE    206    152    160
D1110V2, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             3             152
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OR2M5 MUTATED        7      2      4      1
  OR2M5 WILD-TYPE    128    122    121     59
D1110V3, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             2             122
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR2M5 MUTATED        9      3      2
  OR2M5 WILD-TYPE    244     99     87
D1110V4, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR2M5 MUTATED        2      9      5
  OR2M5 WILD-TYPE    162    238    138
D1110V5, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             9             238
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR2M5 MUTATED        4      3      6      0      3
  OR2M5 WILD-TYPE    117    101     85    121    114
D1110V6, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OR2M5 MUTATED        1     11      4
  OR2M5 WILD-TYPE    158    240    161
D1110V7, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            11             240
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR2M5 MUTATED        3      7      3      0      3
  OR2M5 WILD-TYPE    115    124    148     94     78
D1110V8, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             124
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR2M5 MUTATED        0      4      3      3      2
  OR2M5 WILD-TYPE    118    132    112     37     69
D1110V9, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             3              37
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OR2M5 MUTATED        1      4      5      2      0
  OR2M5 WILD-TYPE     47    105    125     99     92
D1110V10, multiclass
        clus
vv       OR2M5 MUTATED OR2M5 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1111) Variable = RANBP3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RANBP3 MUTATED        2      1      1      9
  RANBP3 WILD-TYPE    133     91    171    167
D1111V1, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RANBP3 MUTATED        9      1      2
  RANBP3 WILD-TYPE    206    154    160
D1111V2, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RANBP3 MUTATED        5      5      1      2
  RANBP3 WILD-TYPE    130    119    124     58
D1111V3, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              5              119
  CLUS_3              1              124
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RANBP3 MUTATED        9      3      1
  RANBP3 WILD-TYPE    244     99     88
D1111V4, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RANBP3 MUTATED        3      7      4
  RANBP3 WILD-TYPE    161    240    139
D1111V5, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              7              240
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RANBP3 MUTATED        1      4      6      1      2
  RANBP3 WILD-TYPE    120    100     85    120    115
D1111V6, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  RANBP3 MUTATED        1     11      2
  RANBP3 WILD-TYPE    158    240    163
D1111V7, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             11              240
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RANBP3 MUTATED        2      7      4      1      0
  RANBP3 WILD-TYPE    116    124    147     93     81
D1111V8, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              7              124
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RANBP3 MUTATED        1      5      1      2      2
  RANBP3 WILD-TYPE    117    131    114     38     69
D1111V9, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RANBP3 MUTATED        1      3      5      1      1
  RANBP3 WILD-TYPE     47    106    125    100     91
D1111V10, multiclass
        clus
vv       RANBP3 MUTATED RANBP3 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              5              125
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1112) Variable = PLK1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLK1 MUTATED        2      2      1     13
  PLK1 WILD-TYPE    133     90    171    163
D1112V1, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK1 MUTATED        9      1      6
  PLK1 WILD-TYPE    206    154    156
D1112V2, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            1            154
  CLUS_3            6            156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PLK1 MUTATED        5      6      2      2
  PLK1 WILD-TYPE    130    118    123     58
D1112V3, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK1 MUTATED       10      4      1
  PLK1 WILD-TYPE    243     98     88
D1112V4, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK1 MUTATED        2      9      6
  PLK1 WILD-TYPE    162    238    137
D1112V5, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            9            238
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK1 MUTATED        1      3      7      0      6
  PLK1 WILD-TYPE    120    101     84    121    111
D1112V6, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            7             84
  CLUS_4            0            121
  CLUS_5            6            111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PLK1 MUTATED        1      9      7
  PLK1 WILD-TYPE    158    242    158
D1112V7, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            9            242
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK1 MUTATED        2      6      5      0      4
  PLK1 WILD-TYPE    116    125    146     94     77
D1112V8, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            4             77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK1 MUTATED        0      6      5      1      1
  PLK1 WILD-TYPE    118    130    110     39     70
D1112V9, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            130
  CLUS_3            5            110
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PLK1 MUTATED        0      4      5      4      0
  PLK1 WILD-TYPE     48    105    125     97     92
D1112V10, multiclass
        clus
vv       PLK1 MUTATED PLK1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            5            125
  CLUS_4            4             97
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1113) Variable = BRPF3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRPF3 MUTATED        2      2      1      8
  BRPF3 WILD-TYPE    133     90    171    168
D1113V1, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRPF3 MUTATED        6      1      3
  BRPF3 WILD-TYPE    209    154    159
D1113V2, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRPF3 MUTATED        2      8      1      1
  BRPF3 WILD-TYPE    133    116    124     59
D1113V3, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             8             116
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRPF3 MUTATED        5      6      1
  BRPF3 WILD-TYPE    248     96     88
D1113V4, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRPF3 MUTATED        3      4      4
  BRPF3 WILD-TYPE    161    243    139
D1113V5, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             4             243
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRPF3 MUTATED        2      1      4      1      3
  BRPF3 WILD-TYPE    119    103     87    120    114
D1113V6, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRPF3 MUTATED        2      6      5
  BRPF3 WILD-TYPE    157    245    160
D1113V7, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             6             245
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRPF3 MUTATED        0      4      4      2      3
  BRPF3 WILD-TYPE    118    127    147     92     78
D1113V8, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             4             147
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRPF3 MUTATED        2      1      2      1      4
  BRPF3 WILD-TYPE    116    135    113     39     67
D1113V9, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             1             135
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRPF3 MUTATED        1      3      2      2      2
  BRPF3 WILD-TYPE     47    106    128     99     90
D1113V10, multiclass
        clus
vv       BRPF3 MUTATED BRPF3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             2              99
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1114) Variable = CSNK1G3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK1G3 MUTATED        0      0      0      9
  CSNK1G3 WILD-TYPE    135     92    172    167
D1114V1, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               0               172
  CLUS_4               9               167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G3 MUTATED        6      0      2
  CSNK1G3 WILD-TYPE    209    155    160
D1114V2, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               0               155
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK1G3 MUTATED        4      3      0      1
  CSNK1G3 WILD-TYPE    131    121    125     59
D1114V3, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               3               121
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G3 MUTATED        7      1      0
  CSNK1G3 WILD-TYPE    246    101     89
D1114V4, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G3 MUTATED        1      4      3
  CSNK1G3 WILD-TYPE    163    243    140
D1114V5, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G3 MUTATED        0      2      4      0      2
  CSNK1G3 WILD-TYPE    121    102     87    121    115
D1114V6, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               2               102
  CLUS_3               4                87
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G3 MUTATED        1      6      2
  CSNK1G3 WILD-TYPE    158    245    163
D1114V7, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               6               245
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G3 MUTATED        0      3      5      0      1
  CSNK1G3 WILD-TYPE    118    128    146     94     80
D1114V8, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               5               146
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G3 MUTATED        0      3      1      0      3
  CSNK1G3 WILD-TYPE    118    133    114     40     68
D1114V9, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G3 MUTATED        0      3      3      1      0
  CSNK1G3 WILD-TYPE     48    106    127    100     92
D1114V10, multiclass
        clus
vv       CSNK1G3 MUTATED CSNK1G3 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               1               100
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1115) Variable = STX12 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STX12 MUTATED        0      1      0      2
  STX12 WILD-TYPE    135     91    172    174
D1115V1, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STX12 MUTATED        1      2      1
  STX12 WILD-TYPE    214    153    161
D1115V2, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             1             214
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  STX12 MUTATED        2      1      0      0
  STX12 WILD-TYPE    133    123    125     60
D1115V3, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STX12 MUTATED        2      1      0
  STX12 WILD-TYPE    251    101     89
D1115V4, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STX12 MUTATED        1      2      1
  STX12 WILD-TYPE    163    245    142
D1115V5, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             2             245
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX12 MUTATED        1      2      1      0      0
  STX12 WILD-TYPE    120    102     90    121    117
D1115V6, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             1              90
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  STX12 MUTATED        0      3      1
  STX12 WILD-TYPE    159    248    164
D1115V7, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX12 MUTATED        1      0      3      0      0
  STX12 WILD-TYPE    117    131    148     94     81
D1115V8, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             0             131
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX12 MUTATED        1      2      0      0      1
  STX12 WILD-TYPE    117    134    115     40     70
D1115V9, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  STX12 MUTATED        1      1      2      0      0
  STX12 WILD-TYPE     47    108    128    101     92
D1115V10, multiclass
        clus
vv       STX12 MUTATED STX12 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1116) Variable = KRTAP10-9 MUTATION ANALYSIS
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP10-9 MUTATED        1      1      0      7
  KRTAP10-9 WILD-TYPE    134     91    172    169
D1116V1, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 1                 134
  CLUS_2                 1                  91
  CLUS_3                 0                 172
  CLUS_4                 7                 169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KRTAP10-9 MUTATED        5      0      2
  KRTAP10-9 WILD-TYPE    210    155    160
D1116V2, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 5                 210
  CLUS_2                 0                 155
  CLUS_3                 2                 160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KRTAP10-9 MUTATED        4      3      0      1
  KRTAP10-9 WILD-TYPE    131    121    125     59
D1116V3, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 4                 131
  CLUS_2                 3                 121
  CLUS_3                 0                 125
  CLUS_4                 1                  59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KRTAP10-9 MUTATED        6      2      0
  KRTAP10-9 WILD-TYPE    247    100     89
D1116V4, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 6                 247
  CLUS_2                 2                 100
  CLUS_3                 0                  89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KRTAP10-9 MUTATED        2      4      1
  KRTAP10-9 WILD-TYPE    162    243    142
D1116V5, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 2                 162
  CLUS_2                 4                 243
  CLUS_3                 1                 142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP10-9 MUTATED        1      1      3      0      2
  KRTAP10-9 WILD-TYPE    120    103     88    121    115
D1116V6, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 1                 120
  CLUS_2                 1                 103
  CLUS_3                 3                  88
  CLUS_4                 0                 121
  CLUS_5                 2                 115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3
  KRTAP10-9 MUTATED        0      5      4
  KRTAP10-9 WILD-TYPE    159    246    161
D1116V7, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 0                 159
  CLUS_2                 5                 246
  CLUS_3                 4                 161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP10-9 MUTATED        1      3      4      0      1
  KRTAP10-9 WILD-TYPE    117    128    147     94     80
D1116V8, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 1                 117
  CLUS_2                 3                 128
  CLUS_3                 4                 147
  CLUS_4                 0                  94
  CLUS_5                 1                  80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP10-9 MUTATED        0      0      3      1      3
  KRTAP10-9 WILD-TYPE    118    136    112     39     68
D1116V9, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 0                 118
  CLUS_2                 0                 136
  CLUS_3                 3                 112
  CLUS_4                 1                  39
  CLUS_5                 3                  68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                     vv
clus                  CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KRTAP10-9 MUTATED        1      2      3      1      0
  KRTAP10-9 WILD-TYPE     47    107    127    100     92
D1116V10, multiclass
        clus
vv       KRTAP10-9 MUTATED KRTAP10-9 WILD-TYPE
  CLUS_1                 1                  47
  CLUS_2                 2                 107
  CLUS_3                 3                 127
  CLUS_4                 1                 100
  CLUS_5                 0                  92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1117) Variable = LOXL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LOXL2 MUTATED        3      4      0     10
  LOXL2 WILD-TYPE    132     88    172    166
D1117V1, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4              88
  CLUS_3             0             172
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LOXL2 MUTATED       13      0      2
  LOXL2 WILD-TYPE    202    155    160
D1117V2, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LOXL2 MUTATED        4      6      3      2
  LOXL2 WILD-TYPE    131    118    122     58
D1117V3, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LOXL2 MUTATED        7      6      2
  LOXL2 WILD-TYPE    246     96     87
D1117V4, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LOXL2 MUTATED        0     14      4
  LOXL2 WILD-TYPE    164    233    139
D1117V5, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2            14             233
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LOXL2 MUTATED        2      5      9      0      2
  LOXL2 WILD-TYPE    119     99     82    121    115
D1117V6, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             5              99
  CLUS_3             9              82
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LOXL2 MUTATED        3     12      3
  LOXL2 WILD-TYPE    156    239    162
D1117V7, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            12             239
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LOXL2 MUTATED        2     10      4      0      2
  LOXL2 WILD-TYPE    116    121    147     94     79
D1117V8, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            10             121
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LOXL2 MUTATED        0      8      2      1      2
  LOXL2 WILD-TYPE    118    128    113     39     69
D1117V9, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             128
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LOXL2 MUTATED        0      9      2      2      0
  LOXL2 WILD-TYPE     48    100    128     99     92
D1117V10, multiclass
        clus
vv       LOXL2 MUTATED LOXL2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             9             100
  CLUS_3             2             128
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1118) Variable = SLC25A41 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC25A41 MUTATED        0      2      1      3
  SLC25A41 WILD-TYPE    135     90    171    173
D1118V1, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                2                 90
  CLUS_3                1                171
  CLUS_4                3                173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A41 MUTATED        4      1      1
  SLC25A41 WILD-TYPE    211    154    161
D1118V2, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                1                154
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC25A41 MUTATED        2      1      0      0
  SLC25A41 WILD-TYPE    133    123    125     60
D1118V3, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                1                123
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A41 MUTATED        3      0      0
  SLC25A41 WILD-TYPE    250    102     89
D1118V4, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                3                250
  CLUS_2                0                102
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A41 MUTATED        1      5      0
  SLC25A41 WILD-TYPE    163    242    143
D1118V5, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                5                242
  CLUS_3                0                143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A41 MUTATED        1      2      2      1      0
  SLC25A41 WILD-TYPE    120    102     89    120    117
D1118V6, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                2                 89
  CLUS_4                1                120
  CLUS_5                0                117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC25A41 MUTATED        1      5      0
  SLC25A41 WILD-TYPE    158    246    165
D1118V7, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                5                246
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A41 MUTATED        0      4      1      1      0
  SLC25A41 WILD-TYPE    118    127    150     93     81
D1118V8, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                127
  CLUS_3                1                150
  CLUS_4                1                 93
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A41 MUTATED        1      4      0      0      1
  SLC25A41 WILD-TYPE    117    132    115     40     70
D1118V9, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                4                132
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC25A41 MUTATED        0      5      0      0      1
  SLC25A41 WILD-TYPE     48    104    130    101     91
D1118V10, multiclass
        clus
vv       SLC25A41 MUTATED SLC25A41 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                0                130
  CLUS_4                0                101
  CLUS_5                1                 91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1119) Variable = MAP9 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP9 MUTATED        2      0      2      9
  MAP9 WILD-TYPE    133     92    170    167
D1119V1, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MAP9 MUTATED       11      0      1
  MAP9 WILD-TYPE    204    155    161
D1119V2, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1           11            204
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MAP9 MUTATED        4      6      2      0
  MAP9 WILD-TYPE    131    118    123     60
D1119V3, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MAP9 MUTATED        6      5      1
  MAP9 WILD-TYPE    247     97     88
D1119V4, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            6            247
  CLUS_2            5             97
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MAP9 MUTATED        1     10      2
  MAP9 WILD-TYPE    163    237    141
D1119V5, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            1            163
  CLUS_2           10            237
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP9 MUTATED        1      1      8      1      2
  MAP9 WILD-TYPE    120    103     83    120    115
D1119V6, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            8             83
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MAP9 MUTATED        1     11      2
  MAP9 WILD-TYPE    158    240    163
D1119V7, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           11            240
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP9 MUTATED        0      6      7      0      1
  MAP9 WILD-TYPE    118    125    144     94     80
D1119V8, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            7            144
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP9 MUTATED        1      3      1      3      2
  MAP9 WILD-TYPE    117    133    114     37     69
D1119V9, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            3             37
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MAP9 MUTATED        1      4      4      1      0
  MAP9 WILD-TYPE     47    105    126    100     92
D1119V10, multiclass
        clus
vv       MAP9 MUTATED MAP9 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1120) Variable = SLC9A2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A2 MUTATED        1      1      4      9
  SLC9A2 WILD-TYPE    134     91    168    167
D1120V1, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A2 MUTATED        9      1      5
  SLC9A2 WILD-TYPE    206    154    157
D1120V2, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              9              206
  CLUS_2              1              154
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC9A2 MUTATED        6      3      3      0
  SLC9A2 WILD-TYPE    129    121    122     60
D1120V3, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              3              121
  CLUS_3              3              122
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A2 MUTATED        7      2      3
  SLC9A2 WILD-TYPE    246    100     86
D1120V4, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              2              100
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A2 MUTATED        0      8      7
  SLC9A2 WILD-TYPE    164    239    136
D1120V5, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              8              239
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A2 MUTATED        1      3      4      0      7
  SLC9A2 WILD-TYPE    120    101     87    121    110
D1120V6, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLC9A2 MUTATED        1      9      5
  SLC9A2 WILD-TYPE    158    242    160
D1120V7, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A2 MUTATED        3      4      6      0      2
  SLC9A2 WILD-TYPE    115    127    145     94     79
D1120V8, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              127
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A2 MUTATED        0      7      2      1      3
  SLC9A2 WILD-TYPE    118    129    113     39     68
D1120V9, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              7              129
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC9A2 MUTATED        0      5      5      3      0
  SLC9A2 WILD-TYPE     48    104    125     98     92
D1120V10, multiclass
        clus
vv       SLC9A2 MUTATED SLC9A2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              5              125
  CLUS_4              3               98
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1121) Variable = SEC31B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC31B MUTATED        2      1      4     15
  SEC31B WILD-TYPE    133     91    168    161
D1121V1, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             15              161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEC31B MUTATED       17      0      4
  SEC31B WILD-TYPE    198    155    158
D1121V2, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1             17              198
  CLUS_2              0              155
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SEC31B MUTATED        6      4      2      3
  SEC31B WILD-TYPE    129    120    123     57
D1121V3, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEC31B MUTATED       12      1      2
  SEC31B WILD-TYPE    241    101     87
D1121V4, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1             12              241
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEC31B MUTATED        1     14      6
  SEC31B WILD-TYPE    163    233    137
D1121V5, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              1              163
  CLUS_2             14              233
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SEC31B MUTATED        1      4      8      3      5
  SEC31B WILD-TYPE    120    100     83    118    112
D1121V6, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              1              120
  CLUS_2              4              100
  CLUS_3              8               83
  CLUS_4              3              118
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SEC31B MUTATED        3     13      6
  SEC31B WILD-TYPE    156    238    159
D1121V7, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              3              156
  CLUS_2             13              238
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SEC31B MUTATED        1     11      7      0      3
  SEC31B WILD-TYPE    117    120    144     94     78
D1121V8, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              1              117
  CLUS_2             11              120
  CLUS_3              7              144
  CLUS_4              0               94
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SEC31B MUTATED        1      8      3      1      3
  SEC31B WILD-TYPE    117    128    112     39     68
D1121V9, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              8              128
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SEC31B MUTATED        0      8      4      4      0
  SEC31B WILD-TYPE     48    101    126     97     92
D1121V10, multiclass
        clus
vv       SEC31B MUTATED SEC31B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              8              101
  CLUS_3              4              126
  CLUS_4              4               97
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1122) Variable = MINA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MINA MUTATED        0      0      0      8
  MINA WILD-TYPE    135     92    172    168
D1122V1, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MINA MUTATED        5      0      1
  MINA WILD-TYPE    210    155    161
D1122V2, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            5            210
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MINA MUTATED        3      3      0      0
  MINA WILD-TYPE    132    121    125     60
D1122V3, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MINA MUTATED        4      1      1
  MINA WILD-TYPE    249    101     88
D1122V4, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            4            249
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MINA MUTATED        0      4      2
  MINA WILD-TYPE    164    243    141
D1122V5, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            0            164
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MINA MUTATED        0      2      3      0      1
  MINA WILD-TYPE    121    102     88    121    116
D1122V6, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MINA MUTATED        0      7      1
  MINA WILD-TYPE    159    244    164
D1122V7, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            0            159
  CLUS_2            7            244
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MINA MUTATED        1      2      5      0      0
  MINA WILD-TYPE    117    129    146     94     81
D1122V8, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MINA MUTATED        0      1      1      0      4
  MINA WILD-TYPE    118    135    114     40     67
D1122V9, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MINA MUTATED        0      1      4      1      0
  MINA WILD-TYPE     48    108    126    100     92
D1122V10, multiclass
        clus
vv       MINA MUTATED MINA WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1123) Variable = CAB39L MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAB39L MUTATED        1      0      1      6
  CAB39L WILD-TYPE    134     92    171    170
D1123V1, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAB39L MUTATED        6      0      0
  CAB39L WILD-TYPE    209    155    162
D1123V2, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CAB39L MUTATED        2      3      1      1
  CAB39L WILD-TYPE    133    121    124     59
D1123V3, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              2              133
  CLUS_2              3              121
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAB39L MUTATED        5      1      1
  CAB39L WILD-TYPE    248    101     88
D1123V4, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAB39L MUTATED        2      4      1
  CAB39L WILD-TYPE    162    243    142
D1123V5, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              2              162
  CLUS_2              4              243
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CAB39L MUTATED        0      2      5      0      0
  CAB39L WILD-TYPE    121    102     86    121    117
D1123V6, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CAB39L MUTATED        1      6      1
  CAB39L WILD-TYPE    158    245    164
D1123V7, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              1              158
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CAB39L MUTATED        1      6      1      0      0
  CAB39L WILD-TYPE    117    125    150     94     81
D1123V8, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              125
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CAB39L MUTATED        0      3      0      1      2
  CAB39L WILD-TYPE    118    133    115     39     69
D1123V9, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CAB39L MUTATED        1      4      1      0      0
  CAB39L WILD-TYPE     47    105    129    101     92
D1123V10, multiclass
        clus
vv       CAB39L MUTATED CAB39L WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1124) Variable = GPR137B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR137B MUTATED        0      1      3      4
  GPR137B WILD-TYPE    135     91    169    172
D1124V1, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPR137B MUTATED        5      2      1
  GPR137B WILD-TYPE    210    153    161
D1124V2, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               5               210
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR137B MUTATED        1      2      1      0
  GPR137B WILD-TYPE    134    122    124     60
D1124V3, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPR137B MUTATED        2      1      1
  GPR137B WILD-TYPE    251    101     88
D1124V4, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               2               251
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPR137B MUTATED        2      5      1
  GPR137B WILD-TYPE    162    242    142
D1124V5, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               2               162
  CLUS_2               5               242
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR137B MUTATED        2      1      4      1      0
  GPR137B WILD-TYPE    119    103     87    120    117
D1124V6, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               2               119
  CLUS_2               1               103
  CLUS_3               4                87
  CLUS_4               1               120
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  GPR137B MUTATED        4      2      2
  GPR137B WILD-TYPE    155    249    163
D1124V7, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               4               155
  CLUS_2               2               249
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR137B MUTATED        3      2      1      1      1
  GPR137B WILD-TYPE    115    129    150     93     80
D1124V8, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               3               115
  CLUS_2               2               129
  CLUS_3               1               150
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR137B MUTATED        2      2      3      0      1
  GPR137B WILD-TYPE    116    134    112     40     70
D1124V9, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR137B MUTATED        1      2      1      3      1
  GPR137B WILD-TYPE     47    107    129     98     91
D1124V10, multiclass
        clus
vv       GPR137B MUTATED GPR137B WILD-TYPE
  CLUS_1               1                47
  CLUS_2               2               107
  CLUS_3               1               129
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1125) Variable = IL1F7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL1F7 MUTATED        0      1      0      3
  IL1F7 WILD-TYPE    135     91    172    173
D1125V1, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1F7 MUTATED        2      1      0
  IL1F7 WILD-TYPE    213    154    162
D1125V2, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IL1F7 MUTATED        1      1      0      0
  IL1F7 WILD-TYPE    134    123    125     60
D1125V3, multiclass
[1] "Remove cluster labels:" "IL1F7 MUTATED"         
clus
  IL1F7 MUTATED IL1F7 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4292 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361      TCGA-BR-4362 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368      TCGA-BR-4369 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452      TCGA-BR-6453 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565      TCGA-BR-6566 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707      TCGA-BR-6709 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802      TCGA-BR-6803 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716      TCGA-BR-7717 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080      TCGA-BR-8081 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286      TCGA-BR-8289 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8369      TCGA-BR-8370 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8380      TCGA-BR-8381 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8484 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8588      TCGA-BR-8589 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686      TCGA-BR-8687 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U      TCGA-BR-A452 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4      TCGA-BR-A4J5 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI      TCGA-BR-A4QL 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529      TCGA-CD-8530 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C      TCGA-CD-A4MG 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CD-A4MJ      TCGA-CG-4300 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4301      TCGA-CG-4304      TCGA-CG-4305      TCGA-CG-4306 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438      TCGA-CG-4442 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449      TCGA-CG-4455 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466      TCGA-CG-4469 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476      TCGA-CG-4477 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723      TCGA-CG-5724 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527      TCGA-D7-6528 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8573 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578      TCGA-D7-A4YT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX      TCGA-D7-A4YY 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX      TCGA-D7-A6EY 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748      TCGA-EQ-8122 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916      TCGA-FP-7998 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8602 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF      TCGA-HU-A4GQ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1F7 MUTATED        2      0      0
  IL1F7 WILD-TYPE    251    102     89
D1125V4, multiclass
[1] "Remove cluster labels:" "IL1F7 MUTATED"         
clus
  IL1F7 MUTATED IL1F7 WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4292 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361      TCGA-BR-4362 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368      TCGA-BR-4369 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452      TCGA-BR-6453 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565      TCGA-BR-6566 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707      TCGA-BR-6709 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802      TCGA-BR-6803 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197      TCGA-BR-7703 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716      TCGA-BR-7717 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080      TCGA-BR-8081 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286      TCGA-BR-8289 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8369      TCGA-BR-8370 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8380      TCGA-BR-8381 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8484 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8485      TCGA-BR-8486      TCGA-BR-8588      TCGA-BR-8589 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8590      TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8677      TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686      TCGA-BR-8687 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U      TCGA-BR-A452 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4      TCGA-BR-A4J5 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI      TCGA-BR-A4QL 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529      TCGA-CD-8530 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C      TCGA-CD-A4MG 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CD-A4MJ      TCGA-CG-4300 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4301      TCGA-CG-4304      TCGA-CG-4305      TCGA-CG-4306 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438      TCGA-CG-4442 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449      TCGA-CG-4455 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466      TCGA-CG-4469 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476      TCGA-CG-4477 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723      TCGA-CG-5724 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527      TCGA-D7-6528 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818      TCGA-D7-6820 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572      TCGA-D7-8573 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578      TCGA-D7-A4YT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX      TCGA-D7-A4YY 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX      TCGA-D7-A6EY 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748      TCGA-EQ-8122 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916      TCGA-FP-7998 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8602 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF      TCGA-HU-A4GQ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"IL1F7 WILD-TYPE" "IL1F7 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1F7 MUTATED        1      3      0
  IL1F7 WILD-TYPE    163    244    143
D1125V5, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1F7 MUTATED        0      1      2      1      0
  IL1F7 WILD-TYPE    121    103     89    120    117
D1125V6, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IL1F7 MUTATED        1      2      1
  IL1F7 WILD-TYPE    158    249    164
D1125V7, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             2             249
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1F7 MUTATED        1      2      0      1      0
  IL1F7 WILD-TYPE    117    129    151     93     81
D1125V8, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             0             151
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1F7 MUTATED        1      1      1      0      0
  IL1F7 WILD-TYPE    117    135    114     40     71
D1125V9, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IL1F7 MUTATED        0      1      0      1      1
  IL1F7 WILD-TYPE     48    108    130    100     91
D1125V10, multiclass
        clus
vv       IL1F7 MUTATED IL1F7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1126) Variable = TM7SF3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TM7SF3 MUTATED        1      1      1      4
  TM7SF3 WILD-TYPE    134     91    171    172
D1126V1, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF3 MUTATED        5      1      0
  TM7SF3 WILD-TYPE    210    154    162
D1126V2, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              1              154
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TM7SF3 MUTATED        3      3      0      0
  TM7SF3 WILD-TYPE    132    121    125     60
D1126V3, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF3 MUTATED        4      1      1
  TM7SF3 WILD-TYPE    249    101     88
D1126V4, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF3 MUTATED        1      5      1
  TM7SF3 WILD-TYPE    163    242    142
D1126V5, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF3 MUTATED        0      1      4      1      1
  TM7SF3 WILD-TYPE    121    103     87    120    116
D1126V6, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TM7SF3 MUTATED        2      5      0
  TM7SF3 WILD-TYPE    157    246    165
D1126V7, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF3 MUTATED        1      4      1      1      0
  TM7SF3 WILD-TYPE    117    127    150     93     81
D1126V8, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              127
  CLUS_3              1              150
  CLUS_4              1               93
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF3 MUTATED        1      3      0      0      1
  TM7SF3 WILD-TYPE    117    133    115     40     70
D1126V9, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TM7SF3 MUTATED        0      2      2      0      1
  TM7SF3 WILD-TYPE     48    107    128    101     91
D1126V10, multiclass
        clus
vv       TM7SF3 MUTATED TM7SF3 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1127) Variable = TTK MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTK MUTATED        4      1      6     11
  TTK WILD-TYPE    131     91    166    165
D1127V1, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           4           131
  CLUS_2           1            91
  CLUS_3           6           166
  CLUS_4          11           165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  TTK MUTATED       18      2      1
  TTK WILD-TYPE    197    153    161
D1127V2, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1          18           197
  CLUS_2           2           153
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TTK MUTATED        4      8      3      2
  TTK WILD-TYPE    131    116    122     58
D1127V3, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           4           131
  CLUS_2           8           116
  CLUS_3           3           122
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  TTK MUTATED        6      6      5
  TTK WILD-TYPE    247     96     84
D1127V4, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           6           247
  CLUS_2           6            96
  CLUS_3           5            84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  TTK MUTATED        5      9      7
  TTK WILD-TYPE    159    238    136
D1127V5, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           5           159
  CLUS_2           9           238
  CLUS_3           7           136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTK MUTATED        4      4      8      0      5
  TTK WILD-TYPE    117    100     83    121    112
D1127V6, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           4           117
  CLUS_2           4           100
  CLUS_3           8            83
  CLUS_4           0           121
  CLUS_5           5           112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  TTK MUTATED        5     13      4
  TTK WILD-TYPE    154    238    161
D1127V7, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           5           154
  CLUS_2          13           238
  CLUS_3           4           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTK MUTATED        4     10      4      1      3
  TTK WILD-TYPE    114    121    147     93     78
D1127V8, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           4           114
  CLUS_2          10           121
  CLUS_3           4           147
  CLUS_4           1            93
  CLUS_5           3            78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTK MUTATED        1      8      2      3      7
  TTK WILD-TYPE    117    128    113     37     64
D1127V9, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           1           117
  CLUS_2           8           128
  CLUS_3           2           113
  CLUS_4           3            37
  CLUS_5           7            64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TTK MUTATED        2     10      7      1      1
  TTK WILD-TYPE     46     99    123    100     91
D1127V10, multiclass
        clus
vv       TTK MUTATED TTK WILD-TYPE
  CLUS_1           2            46
  CLUS_2          10            99
  CLUS_3           7           123
  CLUS_4           1           100
  CLUS_5           1            91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1128) Variable = SLFN13 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN13 MUTATED        0      1      0      9
  SLFN13 WILD-TYPE    135     91    172    167
D1128V1, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN13 MUTATED        6      0      2
  SLFN13 WILD-TYPE    209    155    160
D1128V2, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLFN13 MUTATED        3      5      0      1
  SLFN13 WILD-TYPE    132    119    125     59
D1128V3, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN13 MUTATED        9      0      0
  SLFN13 WILD-TYPE    244    102     89
D1128V4, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN13 MUTATED        1      6      2
  SLFN13 WILD-TYPE    163    241    141
D1128V5, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLFN13 MUTATED        0      2      5      0      2
  SLFN13 WILD-TYPE    121    102     86    121    115
D1128V6, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SLFN13 MUTATED        0      9      1
  SLFN13 WILD-TYPE    159    242    164
D1128V7, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              9              242
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLFN13 MUTATED        0      5      5      0      0
  SLFN13 WILD-TYPE    118    126    146     94     81
D1128V8, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLFN13 MUTATED        0      2      0      0      5
  SLFN13 WILD-TYPE    118    134    115     40     66
D1128V9, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLFN13 MUTATED        0      3      4      0      0
  SLFN13 WILD-TYPE     48    106    126    101     92
D1128V10, multiclass
        clus
vv       SLFN13 MUTATED SLFN13 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              3              106
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1129) Variable = RBBP8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBBP8 MUTATED        0      1      1      6
  RBBP8 WILD-TYPE    135     91    171    170
D1129V1, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBBP8 MUTATED        4      0      2
  RBBP8 WILD-TYPE    211    155    160
D1129V2, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBBP8 MUTATED        1      2      3      1
  RBBP8 WILD-TYPE    134    122    122     59
D1129V3, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2             122
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBBP8 MUTATED        4      0      3
  RBBP8 WILD-TYPE    249    102     86
D1129V4, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBBP8 MUTATED        1      4      3
  RBBP8 WILD-TYPE    163    243    140
D1129V5, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBBP8 MUTATED        0      2      2      1      3
  RBBP8 WILD-TYPE    121    102     89    120    114
D1129V6, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBBP8 MUTATED        0      5      3
  RBBP8 WILD-TYPE    159    246    162
D1129V7, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBBP8 MUTATED        1      3      2      1      1
  RBBP8 WILD-TYPE    117    128    149     93     80
D1129V8, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBBP8 MUTATED        0      1      1      1      1
  RBBP8 WILD-TYPE    118    135    114     39     70
D1129V9, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBBP8 MUTATED        0      1      1      1      1
  RBBP8 WILD-TYPE     48    108    129    100     91
D1129V10, multiclass
        clus
vv       RBBP8 MUTATED RBBP8 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1130) Variable = SPANXC MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPANXC MUTATED        3      0      2      6
  SPANXC WILD-TYPE    132     92    170    170
D1130V1, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              3              132
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPANXC MUTATED        6      2      0
  SPANXC WILD-TYPE    209    153    162
D1130V2, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              6              209
  CLUS_2              2              153
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPANXC MUTATED        4      2      1      0
  SPANXC WILD-TYPE    131    122    124     60
D1130V3, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPANXC MUTATED        4      2      1
  SPANXC WILD-TYPE    249    100     88
D1130V4, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              4              249
  CLUS_2              2              100
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPANXC MUTATED        4      6      1
  SPANXC WILD-TYPE    160    241    142
D1130V5, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              4              160
  CLUS_2              6              241
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPANXC MUTATED        0      1      7      3      0
  SPANXC WILD-TYPE    121    103     84    118    117
D1130V6, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              0              121
  CLUS_2              1              103
  CLUS_3              7               84
  CLUS_4              3              118
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPANXC MUTATED        4      7      0
  SPANXC WILD-TYPE    155    244    165
D1130V7, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              4              155
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPANXC MUTATED        0      8      1      2      0
  SPANXC WILD-TYPE    118    123    150     92     81
D1130V8, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              0              118
  CLUS_2              8              123
  CLUS_3              1              150
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPANXC MUTATED        3      1      0      1      1
  SPANXC WILD-TYPE    115    135    115     39     70
D1130V9, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              3              115
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPANXC MUTATED        1      2      1      0      2
  SPANXC WILD-TYPE     47    107    129    101     90
D1130V10, multiclass
        clus
vv       SPANXC MUTATED SPANXC WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1131) Variable = MSL3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MSL3 MUTATED        1      0      1      7
  MSL3 WILD-TYPE    134     92    171    169
D1131V1, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL3 MUTATED        4      0      5
  MSL3 WILD-TYPE    211    155    157
D1131V2, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            0            155
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MSL3 MUTATED        3      3      1      1
  MSL3 WILD-TYPE    132    121    124     59
D1131V3, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL3 MUTATED        5      3      0
  MSL3 WILD-TYPE    248     99     89
D1131V4, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL3 MUTATED        1      5      3
  MSL3 WILD-TYPE    163    242    140
D1131V5, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL3 MUTATED        2      0      4      0      3
  MSL3 WILD-TYPE    119    104     87    121    114
D1131V6, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            0            104
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  MSL3 MUTATED        0      6      3
  MSL3 WILD-TYPE    159    245    162
D1131V7, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL3 MUTATED        0      3      4      0      2
  MSL3 WILD-TYPE    118    128    147     94     79
D1131V8, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            4            147
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL3 MUTATED        0      2      1      1      3
  MSL3 WILD-TYPE    118    134    114     39     68
D1131V9, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MSL3 MUTATED        1      2      2      2      0
  MSL3 WILD-TYPE     47    107    128     99     92
D1131V10, multiclass
        clus
vv       MSL3 MUTATED MSL3 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1132) Variable = EGLN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGLN1 MUTATED        0      1      1      4
  EGLN1 WILD-TYPE    135     91    171    172
D1132V1, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EGLN1 MUTATED        4      1      0
  EGLN1 WILD-TYPE    211    154    162
D1132V2, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EGLN1 MUTATED        3      0      2      0
  EGLN1 WILD-TYPE    132    124    123     60
D1132V3, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0             124
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EGLN1 MUTATED        2      1      2
  EGLN1 WILD-TYPE    251    101     87
D1132V4, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EGLN1 MUTATED        0      2      3
  EGLN1 WILD-TYPE    164    245    140
D1132V5, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             2             245
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EGLN1 MUTATED        0      1      1      0      3
  EGLN1 WILD-TYPE    121    103     90    121    114
D1132V6, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             1              90
  CLUS_4             0             121
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EGLN1 MUTATED        2      2      2
  EGLN1 WILD-TYPE    157    249    163
D1132V7, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             2             249
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EGLN1 MUTATED        2      1      2      1      0
  EGLN1 WILD-TYPE    116    130    149     93     81
D1132V8, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             1             130
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EGLN1 MUTATED        1      2      1      0      1
  EGLN1 WILD-TYPE    117    134    114     40     70
D1132V9, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EGLN1 MUTATED        0      1      2      1      1
  EGLN1 WILD-TYPE     48    108    128    100     91
D1132V10, multiclass
        clus
vv       EGLN1 MUTATED EGLN1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1133) Variable = ARNT MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARNT MUTATED        1      1      0      6
  ARNT WILD-TYPE    134     91    172    170
D1133V1, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARNT MUTATED        5      1      1
  ARNT WILD-TYPE    210    154    161
D1133V2, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARNT MUTATED        6      1      0      0
  ARNT WILD-TYPE    129    123    125     60
D1133V3, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            6            129
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARNT MUTATED        5      1      1
  ARNT WILD-TYPE    248    101     88
D1133V4, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARNT MUTATED        2      4      2
  ARNT WILD-TYPE    162    243    141
D1133V5, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARNT MUTATED        1      0      5      0      2
  ARNT WILD-TYPE    120    104     86    121    115
D1133V6, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            5             86
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARNT MUTATED        2      6      0
  ARNT WILD-TYPE    157    245    165
D1133V7, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            2            157
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARNT MUTATED        2      4      2      0      0
  ARNT WILD-TYPE    116    127    149     94     81
D1133V8, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARNT MUTATED        1      3      0      2      1
  ARNT WILD-TYPE    117    133    115     38     70
D1133V9, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARNT MUTATED        1      3      2      1      0
  ARNT WILD-TYPE     47    106    128    100     92
D1133V10, multiclass
        clus
vv       ARNT MUTATED ARNT WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1134) Variable = SCN9A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCN9A MUTATED       11     11      4     16
  SCN9A WILD-TYPE    124     81    168    160
D1134V1, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1            11             124
  CLUS_2            11              81
  CLUS_3             4             168
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCN9A MUTATED       25      8      5
  SCN9A WILD-TYPE    190    147    157
D1134V2, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1            25             190
  CLUS_2             8             147
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SCN9A MUTATED       12     10      4      6
  SCN9A WILD-TYPE    123    114    121     54
D1134V3, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1            12             123
  CLUS_2            10             114
  CLUS_3             4             121
  CLUS_4             6              54
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCN9A MUTATED       22      6      4
  SCN9A WILD-TYPE    231     96     85
D1134V4, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1            22             231
  CLUS_2             6              96
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCN9A MUTATED        7     26      7
  SCN9A WILD-TYPE    157    221    136
D1134V5, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1             7             157
  CLUS_2            26             221
  CLUS_3             7             136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN9A MUTATED        8     10     12      5      5
  SCN9A WILD-TYPE    113     94     79    116    112
D1134V6, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1             8             113
  CLUS_2            10              94
  CLUS_3            12              79
  CLUS_4             5             116
  CLUS_5             5             112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SCN9A MUTATED        8     25      9
  SCN9A WILD-TYPE    151    226    156
D1134V7, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1             8             151
  CLUS_2            25             226
  CLUS_3             9             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN9A MUTATED       11     15     13      0      3
  SCN9A WILD-TYPE    107    116    138     94     78
D1134V8, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1            11             107
  CLUS_2            15             116
  CLUS_3            13             138
  CLUS_4             0              94
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN9A MUTATED        5     14      4      1     11
  SCN9A WILD-TYPE    113    122    111     39     60
D1134V9, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1             5             113
  CLUS_2            14             122
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5            11              60
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SCN9A MUTATED        4     14     12      5      0
  SCN9A WILD-TYPE     44     95    118     96     92
D1134V10, multiclass
        clus
vv       SCN9A MUTATED SCN9A WILD-TYPE
  CLUS_1             4              44
  CLUS_2            14              95
  CLUS_3            12             118
  CLUS_4             5              96
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1135) Variable = AMHR2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMHR2 MUTATED        1      0      1      8
  AMHR2 WILD-TYPE    134     92    171    168
D1135V1, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMHR2 MUTATED        5      0      3
  AMHR2 WILD-TYPE    210    155    159
D1135V2, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMHR2 MUTATED        3      4      0      0
  AMHR2 WILD-TYPE    132    120    125     60
D1135V3, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMHR2 MUTATED        5      2      0
  AMHR2 WILD-TYPE    248    100     89
D1135V4, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMHR2 MUTATED        1      8      1
  AMHR2 WILD-TYPE    163    239    142
D1135V5, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMHR2 MUTATED        1      1      7      1      0
  AMHR2 WILD-TYPE    120    103     84    120    117
D1135V6, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  AMHR2 MUTATED        3      7      0
  AMHR2 WILD-TYPE    156    244    165
D1135V7, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             7             244
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMHR2 MUTATED        1      6      3      0      0
  AMHR2 WILD-TYPE    117    125    148     94     81
D1135V8, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             3             148
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMHR2 MUTATED        0      3      1      1      2
  AMHR2 WILD-TYPE    118    133    114     39     69
D1135V9, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMHR2 MUTATED        0      3      2      1      1
  AMHR2 WILD-TYPE     48    106    128    100     91
D1135V10, multiclass
        clus
vv       AMHR2 MUTATED AMHR2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1136) Variable = BRCA1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRCA1 MUTATED        4      0      4     13
  BRCA1 WILD-TYPE    131     92    168    163
D1136V1, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4            13             163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA1 MUTATED       12      1      3
  BRCA1 WILD-TYPE    203    154    159
D1136V2, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BRCA1 MUTATED        6      9      2      0
  BRCA1 WILD-TYPE    129    115    123     60
D1136V3, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             9             115
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA1 MUTATED       11      4      2
  BRCA1 WILD-TYPE    242     98     87
D1136V4, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA1 MUTATED        8      8      3
  BRCA1 WILD-TYPE    156    239    140
D1136V5, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             8             156
  CLUS_2             8             239
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA1 MUTATED        6      1      8      3      1
  BRCA1 WILD-TYPE    115    103     83    118    116
D1136V6, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             6             115
  CLUS_2             1             103
  CLUS_3             8              83
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BRCA1 MUTATED        4     12      5
  BRCA1 WILD-TYPE    155    239    160
D1136V7, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            12             239
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA1 MUTATED        3      7      6      3      2
  BRCA1 WILD-TYPE    115    124    145     91     79
D1136V8, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             124
  CLUS_3             6             145
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA1 MUTATED        0      3      4      4      4
  BRCA1 WILD-TYPE    118    133    111     36     67
D1136V9, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             4             111
  CLUS_4             4              36
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BRCA1 MUTATED        2      4      4      2      3
  BRCA1 WILD-TYPE     46    105    126     99     89
D1136V10, multiclass
        clus
vv       BRCA1 MUTATED BRCA1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1137) Variable = AMICA1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMICA1 MUTATED        3      0      0      5
  AMICA1 WILD-TYPE    132     92    172    171
D1137V1, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMICA1 MUTATED        4      0      0
  AMICA1 WILD-TYPE    211    155    162
D1137V2, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              4              211
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AMICA1 MUTATED        3      3      0      1
  AMICA1 WILD-TYPE    132    121    125     59
D1137V3, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMICA1 MUTATED        7      0      0
  AMICA1 WILD-TYPE    246    102     89
D1137V4, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMICA1 MUTATED        2      5      1
  AMICA1 WILD-TYPE    162    242    142
D1137V5, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              5              242
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMICA1 MUTATED        1      2      5      0      0
  AMICA1 WILD-TYPE    120    102     86    121    117
D1137V6, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  AMICA1 MUTATED        1      7      0
  AMICA1 WILD-TYPE    158    244    165
D1137V7, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMICA1 MUTATED        1      4      3      0      0
  AMICA1 WILD-TYPE    117    127    148     94     81
D1137V8, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMICA1 MUTATED        0      1      0      1      2
  AMICA1 WILD-TYPE    118    135    115     39     69
D1137V9, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AMICA1 MUTATED        1      2      1      0      0
  AMICA1 WILD-TYPE     47    107    129    101     92
D1137V10, multiclass
        clus
vv       AMICA1 MUTATED AMICA1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              2              107
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1138) Variable = OXCT2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OXCT2 MUTATED        0      1      1      4
  OXCT2 WILD-TYPE    135     91    171    172
D1138V1, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OXCT2 MUTATED        3      0      3
  OXCT2 WILD-TYPE    212    155    159
D1138V2, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  OXCT2 MUTATED        1      2      1      0
  OXCT2 WILD-TYPE    134    122    124     60
D1138V3, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OXCT2 MUTATED        0      1      3
  OXCT2 WILD-TYPE    253    101     86
D1138V4, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             0             253
  CLUS_2             1             101
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OXCT2 MUTATED        2      2      2
  OXCT2 WILD-TYPE    162    245    141
D1138V5, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             2             245
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXCT2 MUTATED        1      0      2      2      1
  OXCT2 WILD-TYPE    120    104     89    119    116
D1138V6, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             2              89
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  OXCT2 MUTATED        2      3      1
  OXCT2 WILD-TYPE    157    248    164
D1138V7, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             3             248
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXCT2 MUTATED        0      3      2      1      0
  OXCT2 WILD-TYPE    118    128    149     93     81
D1138V8, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXCT2 MUTATED        1      2      1      0      1
  OXCT2 WILD-TYPE    117    134    114     40     70
D1138V9, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  OXCT2 MUTATED        0      1      3      0      1
  OXCT2 WILD-TYPE     48    108    127    101     91
D1138V10, multiclass
        clus
vv       OXCT2 MUTATED OXCT2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1139) Variable = WWC1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC1 MUTATED        2      2      2     14
  WWC1 WILD-TYPE    133     90    170    162
D1139V1, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            2            170
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC1 MUTATED        7      6      3
  WWC1 WILD-TYPE    208    149    159
D1139V2, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            6            149
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WWC1 MUTATED        6      3      3      2
  WWC1 WILD-TYPE    129    121    122     58
D1139V3, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            6            129
  CLUS_2            3            121
  CLUS_3            3            122
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC1 MUTATED       10      1      3
  WWC1 WILD-TYPE    243    101     86
D1139V4, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1           10            243
  CLUS_2            1            101
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC1 MUTATED        5      7      6
  WWC1 WILD-TYPE    159    240    137
D1139V5, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            5            159
  CLUS_2            7            240
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WWC1 MUTATED        0      5      4      4      5
  WWC1 WILD-TYPE    121     99     87    117    112
D1139V6, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            5             99
  CLUS_3            4             87
  CLUS_4            4            117
  CLUS_5            5            112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WWC1 MUTATED        5     10      5
  WWC1 WILD-TYPE    154    241    160
D1139V7, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           10            241
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WWC1 MUTATED        3      6      5      4      2
  WWC1 WILD-TYPE    115    125    146     90     79
D1139V8, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            6            125
  CLUS_3            5            146
  CLUS_4            4             90
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WWC1 MUTATED        3      5      1      1      5
  WWC1 WILD-TYPE    115    131    114     39     66
D1139V9, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WWC1 MUTATED        1      5      4      1      4
  WWC1 WILD-TYPE     47    104    126    100     88
D1139V10, multiclass
        clus
vv       WWC1 MUTATED WWC1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1140) Variable = ATF5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF5 MUTATED        0      2      0      3
  ATF5 WILD-TYPE    135     90    172    173
D1140V1, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATF5 MUTATED        2      0      1
  ATF5 WILD-TYPE    213    155    161
D1140V2, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            2            213
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATF5 MUTATED        2      2      0      1
  ATF5 WILD-TYPE    133    122    125     59
D1140V3, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATF5 MUTATED        4      1      0
  ATF5 WILD-TYPE    249    101     89
D1140V4, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATF5 MUTATED        1      3      1
  ATF5 WILD-TYPE    163    244    142
D1140V5, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATF5 MUTATED        1      0      3      0      1
  ATF5 WILD-TYPE    120    104     88    121    116
D1140V6, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ATF5 MUTATED        1      3      1
  ATF5 WILD-TYPE    158    248    164
D1140V7, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            3            248
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATF5 MUTATED        1      2      2      0      0
  ATF5 WILD-TYPE    117    129    149     94     81
D1140V8, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATF5 MUTATED        0      1      0      0      2
  ATF5 WILD-TYPE    118    135    115     40     69
D1140V9, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATF5 MUTATED        0      2      1      0      0
  ATF5 WILD-TYPE     48    107    129    101     92
D1140V10, multiclass
        clus
vv       ATF5 MUTATED ATF5 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1141) Variable = EP300 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EP300 MUTATED        6      3      5     22
  EP300 WILD-TYPE    129     89    167    154
D1141V1, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3              89
  CLUS_3             5             167
  CLUS_4            22             154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EP300 MUTATED       14     11      4
  EP300 WILD-TYPE    201    144    158
D1141V2, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1            14             201
  CLUS_2            11             144
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EP300 MUTATED       11     13      5      2
  EP300 WILD-TYPE    124    111    120     58
D1141V3, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1            11             124
  CLUS_2            13             111
  CLUS_3             5             120
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EP300 MUTATED       23      6      2
  EP300 WILD-TYPE    230     96     87
D1141V4, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1            23             230
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EP300 MUTATED       13     14      8
  EP300 WILD-TYPE    151    233    135
D1141V5, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1            13             151
  CLUS_2            14             233
  CLUS_3             8             135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EP300 MUTATED        5      2     15      7      6
  EP300 WILD-TYPE    116    102     76    114    111
D1141V6, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1             5             116
  CLUS_2             2             102
  CLUS_3            15              76
  CLUS_4             7             114
  CLUS_5             6             111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EP300 MUTATED        9     19      7
  EP300 WILD-TYPE    150    232    158
D1141V7, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1             9             150
  CLUS_2            19             232
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EP300 MUTATED        5     10     11      5      4
  EP300 WILD-TYPE    113    121    140     89     77
D1141V8, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1             5             113
  CLUS_2            10             121
  CLUS_3            11             140
  CLUS_4             5              89
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EP300 MUTATED        5      7      3      4      7
  EP300 WILD-TYPE    113    129    112     36     64
D1141V9, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             7             129
  CLUS_3             3             112
  CLUS_4             4              36
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EP300 MUTATED        3      7     10      1      5
  EP300 WILD-TYPE     45    102    120    100     87
D1141V10, multiclass
        clus
vv       EP300 MUTATED EP300 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             7             102
  CLUS_3            10             120
  CLUS_4             1             100
  CLUS_5             5              87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1142) Variable = DLD MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLD MUTATED        6      1      2      5
  DLD WILD-TYPE    129     91    170    171
D1142V1, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           6           129
  CLUS_2           1            91
  CLUS_3           2           170
  CLUS_4           5           171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DLD MUTATED        6      6      2
  DLD WILD-TYPE    209    149    160
D1142V2, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           6           209
  CLUS_2           6           149
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DLD MUTATED        3      4      3      2
  DLD WILD-TYPE    132    120    122     58
D1142V3, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           3           132
  CLUS_2           4           120
  CLUS_3           3           122
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DLD MUTATED        6      4      2
  DLD WILD-TYPE    247     98     87
D1142V4, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           6           247
  CLUS_2           4            98
  CLUS_3           2            87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DLD MUTATED        4      8      1
  DLD WILD-TYPE    160    239    142
D1142V5, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           4           160
  CLUS_2           8           239
  CLUS_3           1           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLD MUTATED        3      2      2      5      1
  DLD WILD-TYPE    118    102     89    116    116
D1142V6, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           3           118
  CLUS_2           2           102
  CLUS_3           2            89
  CLUS_4           5           116
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  DLD MUTATED        4      8      1
  DLD WILD-TYPE    155    243    164
D1142V7, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           4           155
  CLUS_2           8           243
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLD MUTATED        3      4      3      3      0
  DLD WILD-TYPE    115    127    148     91     81
D1142V8, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           3           115
  CLUS_2           4           127
  CLUS_3           3           148
  CLUS_4           3            91
  CLUS_5           0            81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLD MUTATED        3      4      1      1      2
  DLD WILD-TYPE    115    132    114     39     69
D1142V9, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           3           115
  CLUS_2           4           132
  CLUS_3           1           114
  CLUS_4           1            39
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DLD MUTATED        2      3      2      1      3
  DLD WILD-TYPE     46    106    128    100     89
D1142V10, multiclass
        clus
vv       DLD MUTATED DLD WILD-TYPE
  CLUS_1           2            46
  CLUS_2           3           106
  CLUS_3           2           128
  CLUS_4           1           100
  CLUS_5           3            89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1143) Variable = BIRC3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BIRC3 MUTATED        2      2      0      8
  BIRC3 WILD-TYPE    133     90    172    168
D1143V1, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC3 MUTATED        4      2      4
  BIRC3 WILD-TYPE    211    153    158
D1143V2, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             2             153
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BIRC3 MUTATED        4      4      1      1
  BIRC3 WILD-TYPE    131    120    124     59
D1143V3, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC3 MUTATED        7      1      2
  BIRC3 WILD-TYPE    246    101     87
D1143V4, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC3 MUTATED        2      6      4
  BIRC3 WILD-TYPE    162    241    139
D1143V5, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC3 MUTATED        2      1      3      2      4
  BIRC3 WILD-TYPE    119    103     88    119    113
D1143V6, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC3 MUTATED        2      7      3
  BIRC3 WILD-TYPE    157    244    162
D1143V7, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             7             244
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC3 MUTATED        2      2      5      2      1
  BIRC3 WILD-TYPE    116    129    146     92     80
D1143V8, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             129
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC3 MUTATED        1      4      2      0      3
  BIRC3 WILD-TYPE    117    132    113     40     68
D1143V9, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC3 MUTATED        1      2      4      1      2
  BIRC3 WILD-TYPE     47    107    126    100     90
D1143V10, multiclass
        clus
vv       BIRC3 MUTATED BIRC3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1144) Variable = NOS1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOS1 MUTATED        2      3      8     24
  NOS1 WILD-TYPE    133     89    164    152
D1144V1, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3             89
  CLUS_3            8            164
  CLUS_4           24            152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS1 MUTATED       23      4      3
  NOS1 WILD-TYPE    192    151    159
D1144V2, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1           23            192
  CLUS_2            4            151
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOS1 MUTATED       10     10      4      2
  NOS1 WILD-TYPE    125    114    121     58
D1144V3, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1           10            125
  CLUS_2           10            114
  CLUS_3            4            121
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS1 MUTATED       17      5      4
  NOS1 WILD-TYPE    236     97     85
D1144V4, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1           17            236
  CLUS_2            5             97
  CLUS_3            4             85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS1 MUTATED       10     20      6
  NOS1 WILD-TYPE    154    227    137
D1144V5, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1           10            154
  CLUS_2           20            227
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS1 MUTATED        4      6     16      2      8
  NOS1 WILD-TYPE    117     98     75    119    109
D1144V6, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1            4            117
  CLUS_2            6             98
  CLUS_3           16             75
  CLUS_4            2            119
  CLUS_5            8            109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  NOS1 MUTATED        7     23      7
  NOS1 WILD-TYPE    152    228    158
D1144V7, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1            7            152
  CLUS_2           23            228
  CLUS_3            7            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS1 MUTATED        2     15     15      3      2
  NOS1 WILD-TYPE    116    116    136     91     79
D1144V8, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2           15            116
  CLUS_3           15            136
  CLUS_4            3             91
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS1 MUTATED        5     11      3      2      5
  NOS1 WILD-TYPE    113    125    112     38     66
D1144V9, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1            5            113
  CLUS_2           11            125
  CLUS_3            3            112
  CLUS_4            2             38
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOS1 MUTATED        1     11     10      1      3
  NOS1 WILD-TYPE     47     98    120    100     89
D1144V10, multiclass
        clus
vv       NOS1 MUTATED NOS1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2           11             98
  CLUS_3           10            120
  CLUS_4            1            100
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1145) Variable = NOTCH1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED        3      4     14     24
  NOTCH1 WILD-TYPE    132     88    158    152
D1145V1, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              4               88
  CLUS_3             14              158
  CLUS_4             24              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       15     17      6
  NOTCH1 WILD-TYPE    200    138    156
D1145V2, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             15              200
  CLUS_2             17              138
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOTCH1 MUTATED       10     11      6      4
  NOTCH1 WILD-TYPE    125    113    119     56
D1145V3, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             10              125
  CLUS_2             11              113
  CLUS_3              6              119
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       23      6      2
  NOTCH1 WILD-TYPE    230     96     87
D1145V4, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             23              230
  CLUS_2              6               96
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       19     18      6
  NOTCH1 WILD-TYPE    145    229    137
D1145V5, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             19              145
  CLUS_2             18              229
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOTCH1 MUTATED        6      7     12     14      4
  NOTCH1 WILD-TYPE    115     97     79    107    113
D1145V6, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              7               97
  CLUS_3             12               79
  CLUS_4             14              107
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  NOTCH1 MUTATED       18     21      5
  NOTCH1 WILD-TYPE    141    230    160
D1145V7, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             18              141
  CLUS_2             21              230
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOTCH1 MUTATED        5     12     12     13      2
  NOTCH1 WILD-TYPE    113    119    139     81     79
D1145V8, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              5              113
  CLUS_2             12              119
  CLUS_3             12              139
  CLUS_4             13               81
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOTCH1 MUTATED       10      9      5      3      5
  NOTCH1 WILD-TYPE    108    127    110     37     66
D1145V9, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1             10              108
  CLUS_2              9              127
  CLUS_3              5              110
  CLUS_4              3               37
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOTCH1 MUTATED        2      5     11      2     12
  NOTCH1 WILD-TYPE     46    104    119     99     80
D1145V10, multiclass
        clus
vv       NOTCH1 MUTATED NOTCH1 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              5              104
  CLUS_3             11              119
  CLUS_4              2               99
  CLUS_5             12               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1146) Variable = C16ORF7 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF7 MUTATED        1      3      4      8
  C16ORF7 WILD-TYPE    134     89    168    168
D1146V1, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               3                89
  CLUS_3               4               168
  CLUS_4               8               168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C16ORF7 MUTATED        5      6      1
  C16ORF7 WILD-TYPE    210    149    161
D1146V2, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               6               149
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C16ORF7 MUTATED        5      4      3      0
  C16ORF7 WILD-TYPE    130    120    122     60
D1146V3, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               4               120
  CLUS_3               3               122
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C16ORF7 MUTATED        9      1      2
  C16ORF7 WILD-TYPE    244    101     87
D1146V4, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               9               244
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C16ORF7 MUTATED        6      8      2
  C16ORF7 WILD-TYPE    158    239    141
D1146V5, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               6               158
  CLUS_2               8               239
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF7 MUTATED        2      3      5      4      2
  C16ORF7 WILD-TYPE    119    101     86    117    115
D1146V6, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               3               101
  CLUS_3               5                86
  CLUS_4               4               117
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C16ORF7 MUTATED        5      8      3
  C16ORF7 WILD-TYPE    154    243    162
D1146V7, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               5               154
  CLUS_2               8               243
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF7 MUTATED        4      6      1      4      1
  C16ORF7 WILD-TYPE    114    125    150     90     80
D1146V8, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               6               125
  CLUS_3               1               150
  CLUS_4               4                90
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF7 MUTATED        3      4      0      3      0
  C16ORF7 WILD-TYPE    115    132    115     37     71
D1146V9, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               4               132
  CLUS_3               0               115
  CLUS_4               3                37
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C16ORF7 MUTATED        1      4      0      1      4
  C16ORF7 WILD-TYPE     47    105    130    100     88
D1146V10, multiclass
        clus
vv       C16ORF7 MUTATED C16ORF7 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               4                88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1147) Variable = HIVEP3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIVEP3 MUTATED        6      4      5     21
  HIVEP3 WILD-TYPE    129     88    167    155
D1147V1, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              4               88
  CLUS_3              5              167
  CLUS_4             21              155
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP3 MUTATED       23      3      7
  HIVEP3 WILD-TYPE    192    152    155
D1147V2, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1             23              192
  CLUS_2              3              152
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HIVEP3 MUTATED       15      9      1      4
  HIVEP3 WILD-TYPE    120    115    124     56
D1147V3, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1             15              120
  CLUS_2              9              115
  CLUS_3              1              124
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP3 MUTATED       21      5      3
  HIVEP3 WILD-TYPE    232     97     86
D1147V4, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1             21              232
  CLUS_2              5               97
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP3 MUTATED        6     19     10
  HIVEP3 WILD-TYPE    158    228    133
D1147V5, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             19              228
  CLUS_3             10              133
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP3 MUTATED        3      7     12      2     11
  HIVEP3 WILD-TYPE    118     97     79    119    106
D1147V6, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              7               97
  CLUS_3             12               79
  CLUS_4              2              119
  CLUS_5             11              106
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  HIVEP3 MUTATED        7     23      6
  HIVEP3 WILD-TYPE    152    228    159
D1147V7, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              7              152
  CLUS_2             23              228
  CLUS_3              6              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP3 MUTATED        8     12     11      2      3
  HIVEP3 WILD-TYPE    110    119    140     92     78
D1147V8, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              8              110
  CLUS_2             12              119
  CLUS_3             11              140
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP3 MUTATED        2     14      3      2     10
  HIVEP3 WILD-TYPE    116    122    112     38     61
D1147V9, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             14              122
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5             10               61
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HIVEP3 MUTATED        1     13     13      2      2
  HIVEP3 WILD-TYPE     47     96    117     99     90
D1147V10, multiclass
        clus
vv       HIVEP3 MUTATED HIVEP3 WILD-TYPE
  CLUS_1              1               47
  CLUS_2             13               96
  CLUS_3             13              117
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1148) Variable = FBXO32 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO32 MUTATED        0      0      1      6
  FBXO32 WILD-TYPE    135     92    171    170
D1148V1, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO32 MUTATED        5      0      1
  FBXO32 WILD-TYPE    210    155    161
D1148V2, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FBXO32 MUTATED        4      2      0      0
  FBXO32 WILD-TYPE    131    122    125     60
D1148V3, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO32 MUTATED        5      1      0
  FBXO32 WILD-TYPE    248    101     89
D1148V4, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO32 MUTATED        1      4      2
  FBXO32 WILD-TYPE    163    243    141
D1148V5, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              4              243
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO32 MUTATED        0      0      7      0      0
  FBXO32 WILD-TYPE    121    104     84    121    117
D1148V6, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              7               84
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FBXO32 MUTATED        0      7      0
  FBXO32 WILD-TYPE    159    244    165
D1148V7, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              7              244
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO32 MUTATED        0      5      2      0      0
  FBXO32 WILD-TYPE    118    126    149     94     81
D1148V8, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              5              126
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO32 MUTATED        0      3      0      1      1
  FBXO32 WILD-TYPE    118    133    115     39     70
D1148V9, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FBXO32 MUTATED        1      3      1      0      0
  FBXO32 WILD-TYPE     47    106    129    101     92
D1148V10, multiclass
        clus
vv       FBXO32 MUTATED FBXO32 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1149) Variable = BIRC7 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BIRC7 MUTATED        2      0      1      3
  BIRC7 WILD-TYPE    133     92    171    173
D1149V1, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC7 MUTATED        4      0      1
  BIRC7 WILD-TYPE    211    155    161
D1149V2, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BIRC7 MUTATED        3      2      0      1
  BIRC7 WILD-TYPE    132    122    125     59
D1149V3, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC7 MUTATED        5      0      1
  BIRC7 WILD-TYPE    248    102     88
D1149V4, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC7 MUTATED        1      4      1
  BIRC7 WILD-TYPE    163    243    142
D1149V5, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC7 MUTATED        0      1      4      0      1
  BIRC7 WILD-TYPE    121    103     87    121    116
D1149V6, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BIRC7 MUTATED        1      5      0
  BIRC7 WILD-TYPE    158    246    165
D1149V7, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC7 MUTATED        1      4      1      0      0
  BIRC7 WILD-TYPE    117    127    150     94     81
D1149V8, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC7 MUTATED        0      3      0      0      1
  BIRC7 WILD-TYPE    118    133    115     40     70
D1149V9, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BIRC7 MUTATED        0      3      1      0      0
  BIRC7 WILD-TYPE     48    106    129    101     92
D1149V10, multiclass
        clus
vv       BIRC7 MUTATED BIRC7 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1150) Variable = AFP MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AFP MUTATED        0      0      1      3
  AFP WILD-TYPE    135     92    171    173
D1150V1, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           0           135
  CLUS_2           0            92
  CLUS_3           1           171
  CLUS_4           3           173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AFP MUTATED        1      0      2
  AFP WILD-TYPE    214    155    160
D1150V2, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           214
  CLUS_2           0           155
  CLUS_3           2           160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AFP MUTATED        1      2      0      0
  AFP WILD-TYPE    134    122    125     60
D1150V3, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           134
  CLUS_2           2           122
  CLUS_3           0           125
  CLUS_4           0            60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AFP MUTATED        2      1      0
  AFP WILD-TYPE    251    101     89
D1150V4, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           2           251
  CLUS_2           1           101
  CLUS_3           0            89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AFP MUTATED        1      0      2
  AFP WILD-TYPE    163    247    141
D1150V5, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           163
  CLUS_2           0           247
  CLUS_3           2           141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFP MUTATED        1      0      1      0      1
  AFP WILD-TYPE    120    104     90    121    116
D1150V6, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           120
  CLUS_2           0           104
  CLUS_3           1            90
  CLUS_4           0           121
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  AFP MUTATED        1      2      1
  AFP WILD-TYPE    158    249    164
D1150V7, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           158
  CLUS_2           2           249
  CLUS_3           1           164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFP MUTATED        1      0      2      0      1
  AFP WILD-TYPE    117    131    149     94     80
D1150V8, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           117
  CLUS_2           0           131
  CLUS_3           2           149
  CLUS_4           0            94
  CLUS_5           1            80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFP MUTATED        1      0      1      0      1
  AFP WILD-TYPE    117    136    114     40     70
D1150V9, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1           117
  CLUS_2           0           136
  CLUS_3           1           114
  CLUS_4           0            40
  CLUS_5           1            70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AFP MUTATED        1      0      1      1      0
  AFP WILD-TYPE     47    109    129    100     92
D1150V10, multiclass
        clus
vv       AFP MUTATED AFP WILD-TYPE
  CLUS_1           1            47
  CLUS_2           0           109
  CLUS_3           1           129
  CLUS_4           1           100
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1151) Variable = COL11A1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL11A1 MUTATED        7     10     17     26
  COL11A1 WILD-TYPE    128     82    155    150
D1151V1, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1               7               128
  CLUS_2              10                82
  CLUS_3              17               155
  CLUS_4              26               150
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL11A1 MUTATED       33     16      7
  COL11A1 WILD-TYPE    182    139    155
D1151V2, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              33               182
  CLUS_2              16               139
  CLUS_3               7               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  COL11A1 MUTATED       20     13     10      5
  COL11A1 WILD-TYPE    115    111    115     55
D1151V3, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              20               115
  CLUS_2              13               111
  CLUS_3              10               115
  CLUS_4               5                55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL11A1 MUTATED       29     11      8
  COL11A1 WILD-TYPE    224     91     81
D1151V4, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              29               224
  CLUS_2              11                91
  CLUS_3               8                81
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL11A1 MUTATED       15     33     11
  COL11A1 WILD-TYPE    149    214    132
D1151V5, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              15               149
  CLUS_2              33               214
  CLUS_3              11               132
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL11A1 MUTATED       11     14     15     11      8
  COL11A1 WILD-TYPE    110     90     76    110    109
D1151V6, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              11               110
  CLUS_2              14                90
  CLUS_3              15                76
  CLUS_4              11               110
  CLUS_5               8               109
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  COL11A1 MUTATED       14     36     11
  COL11A1 WILD-TYPE    145    215    154
D1151V7, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              14               145
  CLUS_2              36               215
  CLUS_3              11               154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL11A1 MUTATED        9     21     15     10      6
  COL11A1 WILD-TYPE    109    110    136     84     75
D1151V8, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1               9               109
  CLUS_2              21               110
  CLUS_3              15               136
  CLUS_4              10                84
  CLUS_5               6                75
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL11A1 MUTATED       10     21     10      5      5
  COL11A1 WILD-TYPE    108    115    105     35     66
D1151V9, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1              10               108
  CLUS_2              21               115
  CLUS_3              10               105
  CLUS_4               5                35
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  COL11A1 MUTATED        5     14     15      7     10
  COL11A1 WILD-TYPE     43     95    115     94     82
D1151V10, multiclass
        clus
vv       COL11A1 MUTATED COL11A1 WILD-TYPE
  CLUS_1               5                43
  CLUS_2              14                95
  CLUS_3              15               115
  CLUS_4               7                94
  CLUS_5              10                82
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1152) Variable = FAM166B MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM166B MUTATED        1      0      2      6
  FAM166B WILD-TYPE    134     92    170    170
D1152V1, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM166B MUTATED        4      2      3
  FAM166B WILD-TYPE    211    153    159
D1152V2, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FAM166B MUTATED        2      1      2      1
  FAM166B WILD-TYPE    133    123    123     59
D1152V3, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               2               133
  CLUS_2               1               123
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM166B MUTATED        3      2      1
  FAM166B WILD-TYPE    250    100     88
D1152V4, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               3               250
  CLUS_2               2               100
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM166B MUTATED        4      4      1
  FAM166B WILD-TYPE    160    243    142
D1152V5, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               4               160
  CLUS_2               4               243
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM166B MUTATED        2      0      2      2      3
  FAM166B WILD-TYPE    119    104     89    119    114
D1152V6, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               2               119
  CLUS_2               0               104
  CLUS_3               2                89
  CLUS_4               2               119
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  FAM166B MUTATED        3      4      2
  FAM166B WILD-TYPE    156    247    163
D1152V7, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               3               156
  CLUS_2               4               247
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM166B MUTATED        0      3      3      3      0
  FAM166B WILD-TYPE    118    128    148     91     81
D1152V8, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               3               148
  CLUS_4               3                91
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM166B MUTATED        1      3      1      2      2
  FAM166B WILD-TYPE    117    133    114     38     69
D1152V9, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               1               114
  CLUS_4               2                38
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FAM166B MUTATED        0      3      3      0      3
  FAM166B WILD-TYPE     48    106    127    101     89
D1152V10, multiclass
        clus
vv       FAM166B MUTATED FAM166B WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               0               101
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1153) Variable = ARHGEF17 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGEF17 MUTATED        1      3      2     18
  ARHGEF17 WILD-TYPE    134     89    170    158
D1153V1, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                3                 89
  CLUS_3                2                170
  CLUS_4               18                158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF17 MUTATED       12      3      6
  ARHGEF17 WILD-TYPE    203    152    156
D1153V2, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1               12                203
  CLUS_2                3                152
  CLUS_3                6                156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGEF17 MUTATED        7      6      4      2
  ARHGEF17 WILD-TYPE    128    118    121     58
D1153V3, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                7                128
  CLUS_2                6                118
  CLUS_3                4                121
  CLUS_4                2                 58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF17 MUTATED       11      4      4
  ARHGEF17 WILD-TYPE    242     98     85
D1153V4, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1               11                242
  CLUS_2                4                 98
  CLUS_3                4                 85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF17 MUTATED        5     11      7
  ARHGEF17 WILD-TYPE    159    236    136
D1153V5, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                5                159
  CLUS_2               11                236
  CLUS_3                7                136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF17 MUTATED        3      2      9      3      6
  ARHGEF17 WILD-TYPE    118    102     82    118    111
D1153V6, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                3                118
  CLUS_2                2                102
  CLUS_3                9                 82
  CLUS_4                3                118
  CLUS_5                6                111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  ARHGEF17 MUTATED        6     10      8
  ARHGEF17 WILD-TYPE    153    241    157
D1153V7, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                6                153
  CLUS_2               10                241
  CLUS_3                8                157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF17 MUTATED        3      7      7      4      3
  ARHGEF17 WILD-TYPE    115    124    144     90     78
D1153V8, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                7                124
  CLUS_3                7                144
  CLUS_4                4                 90
  CLUS_5                3                 78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF17 MUTATED        3      6      4      1      4
  ARHGEF17 WILD-TYPE    115    130    111     39     67
D1153V9, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                3                115
  CLUS_2                6                130
  CLUS_3                4                111
  CLUS_4                1                 39
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF17 MUTATED        0      6      7      2      3
  ARHGEF17 WILD-TYPE     48    103    123     99     89
D1153V10, multiclass
        clus
vv       ARHGEF17 MUTATED ARHGEF17 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                6                103
  CLUS_3                7                123
  CLUS_4                2                 99
  CLUS_5                3                 89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1154) Variable = RRBP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRBP1 MUTATED        1      5      2     12
  RRBP1 WILD-TYPE    134     87    170    164
D1154V1, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             5              87
  CLUS_3             2             170
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRBP1 MUTATED       15      3      2
  RRBP1 WILD-TYPE    200    152    160
D1154V2, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             3             152
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRBP1 MUTATED        2      7      3      0
  RRBP1 WILD-TYPE    133    117    122     60
D1154V3, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             7             117
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRBP1 MUTATED        5      6      1
  RRBP1 WILD-TYPE    248     96     88
D1154V4, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRBP1 MUTATED        5     11      4
  RRBP1 WILD-TYPE    159    236    139
D1154V5, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRBP1 MUTATED        2      4     10      3      1
  RRBP1 WILD-TYPE    119    100     81    118    116
D1154V6, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             4             100
  CLUS_3            10              81
  CLUS_4             3             118
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRBP1 MUTATED        4     13      3
  RRBP1 WILD-TYPE    155    238    162
D1154V7, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2            13             238
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRBP1 MUTATED        1      6      8      3      2
  RRBP1 WILD-TYPE    117    125    143     91     79
D1154V8, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             6             125
  CLUS_3             8             143
  CLUS_4             3              91
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRBP1 MUTATED        3      7      2      1      4
  RRBP1 WILD-TYPE    115    129    113     39     67
D1154V9, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             129
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRBP1 MUTATED        0      6      6      2      3
  RRBP1 WILD-TYPE     48    103    124     99     89
D1154V10, multiclass
        clus
vv       RRBP1 MUTATED RRBP1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             6             103
  CLUS_3             6             124
  CLUS_4             2              99
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1155) Variable = PROK2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROK2 MUTATED        1      0      0      3
  PROK2 WILD-TYPE    134     92    172    173
D1155V1, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             3             173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PROK2 MUTATED        2      0      1
  PROK2 WILD-TYPE    213    155    161
D1155V2, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             2             213
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PROK2 MUTATED        1      0      0      2
  PROK2 WILD-TYPE    134    124    125     58
D1155V3, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0             124
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PROK2 MUTATED        2      1      0
  PROK2 WILD-TYPE    251    101     89
D1155V4, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PROK2 MUTATED        0      3      1
  PROK2 WILD-TYPE    164    244    142
D1155V5, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             3             244
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PROK2 MUTATED        0      1      2      0      1
  PROK2 WILD-TYPE    121    103     89    121    116
D1155V6, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PROK2 MUTATED        0      2      2
  PROK2 WILD-TYPE    159    249    163
D1155V7, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             2             249
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PROK2 MUTATED        1      2      1      0      0
  PROK2 WILD-TYPE    117    129    150     94     81
D1155V8, multiclass
        clus
vv       PROK2 MUTATED PROK2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             129
  CLUS_3             1             150
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PROK2 MUTATED        0      0      1      0      1
  PROK2 WILD-TYPE    118    136    114     40     70
D1155V9, multiclass
[1] "Remove cluster labels:" "PROK2 MUTATED"         
clus
  PROK2 MUTATED PROK2 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8284      TCGA-BR-8286      TCGA-BR-8289 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8368      TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8372      TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8486      TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8683      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-A489      TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-A4MI      TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5720      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-FP-A9TM      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-8604      TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4GC      TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4GJ      TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4GX      TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A6QS      TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-KB-A6F5      TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4OR      TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4OW      TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A88V      TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A891      TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NG      TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NK      TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NQ      TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NU      TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L7-A6VZ      TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A49N      TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A49S      TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A5U7      TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A663 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PROK2 MUTATED        0      0      1      1      0
  PROK2 WILD-TYPE     48    109    129    100     92
D1155V10, multiclass
[1] "Remove cluster labels:" "PROK2 MUTATED"         
clus
  PROK2 MUTATED PROK2 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8284      TCGA-BR-8286      TCGA-BR-8289 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8368      TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8372      TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8486      TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-8683      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-A489      TCGA-CD-A48C      TCGA-CD-A4MG      TCGA-CD-A4MH 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CD-A4MI      TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5720      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A4BE 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-FP-A9TM      TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HF-7136      TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-8604      TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4GC      TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4GJ      TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4GX      TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-HU-A4H5      TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A6QS      TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-JY-A939      TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-KB-A6F5      TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4OR      TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A4OW      TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A88V      TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A891      TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NG      TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NK      TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NQ      TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L5-A8NU      TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-L7-A6VZ      TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A49N      TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A49S      TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A5U7      TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A663 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"PROK2 WILD-TYPE" "PROK2 WILD-TYPE" 

Clustering(1156) Variable = GIGYF2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GIGYF2 MUTATED        4      1      4     10
  GIGYF2 WILD-TYPE    131     91    168    166
D1156V1, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              1               91
  CLUS_3              4              168
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIGYF2 MUTATED        6      4      7
  GIGYF2 WILD-TYPE    209    151    155
D1156V2, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              4              151
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GIGYF2 MUTATED        4      6      2      4
  GIGYF2 WILD-TYPE    131    118    123     56
D1156V3, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              6              118
  CLUS_3              2              123
  CLUS_4              4               56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIGYF2 MUTATED        8      4      4
  GIGYF2 WILD-TYPE    245     98     85
D1156V4, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              4               98
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIGYF2 MUTATED        6      7      5
  GIGYF2 WILD-TYPE    158    240    138
D1156V5, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              6              158
  CLUS_2              7              240
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIGYF2 MUTATED        1      3      6      5      3
  GIGYF2 WILD-TYPE    120    101     85    116    114
D1156V6, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              6               85
  CLUS_4              5              116
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GIGYF2 MUTATED        5     11      3
  GIGYF2 WILD-TYPE    154    240    162
D1156V7, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             11              240
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIGYF2 MUTATED        0      6      8      4      1
  GIGYF2 WILD-TYPE    118    125    143     90     80
D1156V8, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              6              125
  CLUS_3              8              143
  CLUS_4              4               90
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIGYF2 MUTATED        5      2      2      1      5
  GIGYF2 WILD-TYPE    113    134    113     39     66
D1156V9, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              5              113
  CLUS_2              2              134
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GIGYF2 MUTATED        0      2      8      1      4
  GIGYF2 WILD-TYPE     48    107    122    100     88
D1156V10, multiclass
        clus
vv       GIGYF2 MUTATED GIGYF2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              2              107
  CLUS_3              8              122
  CLUS_4              1              100
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1157) Variable = PSMC4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSMC4 MUTATED        2      0      4      9
  PSMC4 WILD-TYPE    133     92    168    167
D1157V1, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             4             168
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC4 MUTATED        7      5      2
  PSMC4 WILD-TYPE    208    150    160
D1157V2, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             5             150
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PSMC4 MUTATED        6      4      1      0
  PSMC4 WILD-TYPE    129    120    124     60
D1157V3, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC4 MUTATED       11      0      0
  PSMC4 WILD-TYPE    242    102     89
D1157V4, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             0             102
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC4 MUTATED        5      9      1
  PSMC4 WILD-TYPE    159    238    142
D1157V5, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             5             159
  CLUS_2             9             238
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC4 MUTATED        1      3      5      5      1
  PSMC4 WILD-TYPE    120    101     86    116    116
D1157V6, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             5              86
  CLUS_4             5             116
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PSMC4 MUTATED        3     10      3
  PSMC4 WILD-TYPE    156    241    162
D1157V7, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC4 MUTATED        1      8      1      5      1
  PSMC4 WILD-TYPE    117    123    150     89     80
D1157V8, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             1             150
  CLUS_4             5              89
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC4 MUTATED        4      4      3      1      0
  PSMC4 WILD-TYPE    114    132    112     39     71
D1157V9, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             4             132
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PSMC4 MUTATED        1      4      1      1      5
  PSMC4 WILD-TYPE     47    105    129    100     87
D1157V10, multiclass
        clus
vv       PSMC4 MUTATED PSMC4 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             4             105
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             5              87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1158) Variable = ITGB8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGB8 MUTATED        1      2      2     10
  ITGB8 WILD-TYPE    134     90    170    166
D1158V1, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            10             166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGB8 MUTATED       10      1      2
  ITGB8 WILD-TYPE    205    154    160
D1158V2, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ITGB8 MUTATED        5      4      1      1
  ITGB8 WILD-TYPE    130    120    124     59
D1158V3, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGB8 MUTATED        6      4      1
  ITGB8 WILD-TYPE    247     98     88
D1158V4, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             4              98
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGB8 MUTATED        2     10      3
  ITGB8 WILD-TYPE    162    237    140
D1158V5, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            10             237
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGB8 MUTATED        3      4      6      0      2
  ITGB8 WILD-TYPE    118    100     85    121    115
D1158V6, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ITGB8 MUTATED        1     12      2
  ITGB8 WILD-TYPE    158    239    163
D1158V7, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGB8 MUTATED        3      6      4      0      2
  ITGB8 WILD-TYPE    115    125    147     94     79
D1158V8, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGB8 MUTATED        0      2      1      2      7
  ITGB8 WILD-TYPE    118    134    114     38     64
D1158V9, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ITGB8 MUTATED        1      5      4      2      0
  ITGB8 WILD-TYPE     47    104    126     99     92
D1158V10, multiclass
        clus
vv       ITGB8 MUTATED ITGB8 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1159) Variable = ARHGEF5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGEF5 MUTATED        0      0      1      6
  ARHGEF5 WILD-TYPE    135     92    171    170
D1159V1, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               1               171
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGEF5 MUTATED        6      1      1
  ARHGEF5 WILD-TYPE    209    154    161
D1159V2, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               1               154
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARHGEF5 MUTATED        2      2      1      1
  ARHGEF5 WILD-TYPE    133    122    124     59
D1159V3, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2               122
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGEF5 MUTATED        5      1      0
  ARHGEF5 WILD-TYPE    248    101     89
D1159V4, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               5               248
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGEF5 MUTATED        1      4      3
  ARHGEF5 WILD-TYPE    163    243    140
D1159V5, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               4               243
  CLUS_3               3               140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF5 MUTATED        0      1      4      1      2
  ARHGEF5 WILD-TYPE    121    103     87    120    115
D1159V6, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               4                87
  CLUS_4               1               120
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ARHGEF5 MUTATED        1      6      1
  ARHGEF5 WILD-TYPE    158    245    164
D1159V7, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               6               245
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF5 MUTATED        0      3      4      1      0
  ARHGEF5 WILD-TYPE    118    128    147     93     81
D1159V8, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               128
  CLUS_3               4               147
  CLUS_4               1                93
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF5 MUTATED        1      3      0      0      3
  ARHGEF5 WILD-TYPE    117    133    115     40     68
D1159V9, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARHGEF5 MUTATED        0      2      4      0      1
  ARHGEF5 WILD-TYPE     48    107    126    101     91
D1159V10, multiclass
        clus
vv       ARHGEF5 MUTATED ARHGEF5 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               4               126
  CLUS_4               0               101
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1160) Variable = INVS MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INVS MUTATED        3      2      0     18
  INVS WILD-TYPE    132     90    172    158
D1160V1, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4           18            158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INVS MUTATED       14      2      3
  INVS WILD-TYPE    201    153    159
D1160V2, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1           14            201
  CLUS_2            2            153
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INVS MUTATED        7      8      5      0
  INVS WILD-TYPE    128    116    120     60
D1160V3, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            7            128
  CLUS_2            8            116
  CLUS_3            5            120
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INVS MUTATED       10      7      3
  INVS WILD-TYPE    243     95     86
D1160V4, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1           10            243
  CLUS_2            7             95
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INVS MUTATED        2     14      7
  INVS WILD-TYPE    162    233    136
D1160V5, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            2            162
  CLUS_2           14            233
  CLUS_3            7            136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INVS MUTATED        1      5     10      0      7
  INVS WILD-TYPE    120     99     81    121    110
D1160V6, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            1            120
  CLUS_2            5             99
  CLUS_3           10             81
  CLUS_4            0            121
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  INVS MUTATED        2     17      4
  INVS WILD-TYPE    157    234    161
D1160V7, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            2            157
  CLUS_2           17            234
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INVS MUTATED        1     11      8      0      3
  INVS WILD-TYPE    117    120    143     94     78
D1160V8, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            1            117
  CLUS_2           11            120
  CLUS_3            8            143
  CLUS_4            0             94
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INVS MUTATED        0      8      1      2      4
  INVS WILD-TYPE    118    128    114     38     67
D1160V9, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            0            118
  CLUS_2            8            128
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INVS MUTATED        1      9      3      2      0
  INVS WILD-TYPE     47    100    127     99     92
D1160V10, multiclass
        clus
vv       INVS MUTATED INVS WILD-TYPE
  CLUS_1            1             47
  CLUS_2            9            100
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1161) Variable = E2F5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  E2F5 MUTATED        1      0      1      3
  E2F5 WILD-TYPE    134     92    171    173
D1161V1, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  E2F5 MUTATED        2      2      0
  E2F5 WILD-TYPE    213    153    162
D1161V2, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            2            213
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  E2F5 MUTATED        3      1      1      0
  E2F5 WILD-TYPE    132    123    124     60
D1161V3, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            1            123
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  E2F5 MUTATED        3      1      1
  E2F5 WILD-TYPE    250    101     88
D1161V4, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  E2F5 MUTATED        1      2      2
  E2F5 WILD-TYPE    163    245    141
D1161V5, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            2            245
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  E2F5 MUTATED        1      1      1      1      1
  E2F5 WILD-TYPE    120    103     90    120    116
D1161V6, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            1             90
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  E2F5 MUTATED        2      1      2
  E2F5 WILD-TYPE    157    250    163
D1161V7, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            1            250
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  E2F5 MUTATED        0      2      0      1      2
  E2F5 WILD-TYPE    118    129    151     93     79
D1161V8, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            0            151
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  E2F5 MUTATED        1      0      2      0      0
  E2F5 WILD-TYPE    117    136    113     40     71
D1161V9, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            0            136
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  E2F5 MUTATED        0      0      0      2      1
  E2F5 WILD-TYPE     48    109    130     99     91
D1161V10, multiclass
        clus
vv       E2F5 MUTATED E2F5 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            0            109
  CLUS_3            0            130
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1162) Variable = MKI67IP MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKI67IP MUTATED        1      2      0      5
  MKI67IP WILD-TYPE    134     90    172    171
D1162V1, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               1               134
  CLUS_2               2                90
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MKI67IP MUTATED        3      0      3
  MKI67IP WILD-TYPE    212    155    159
D1162V2, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               3               212
  CLUS_2               0               155
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MKI67IP MUTATED        0      2      2      1
  MKI67IP WILD-TYPE    135    122    123     59
D1162V3, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               0               135
  CLUS_2               2               122
  CLUS_3               2               123
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MKI67IP MUTATED        2      1      2
  MKI67IP WILD-TYPE    251    101     87
D1162V4, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               2               251
  CLUS_2               1               101
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MKI67IP MUTATED        1      2      4
  MKI67IP WILD-TYPE    163    245    139
D1162V5, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               1               163
  CLUS_2               2               245
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKI67IP MUTATED        0      0      2      1      4
  MKI67IP WILD-TYPE    121    104     89    120    113
D1162V6, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               0               121
  CLUS_2               0               104
  CLUS_3               2                89
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  MKI67IP MUTATED        1      4      4
  MKI67IP WILD-TYPE    158    247    161
D1162V7, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               1               158
  CLUS_2               4               247
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKI67IP MUTATED        2      3      3      0      1
  MKI67IP WILD-TYPE    116    128    148     94     80
D1162V8, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               2               116
  CLUS_2               3               128
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKI67IP MUTATED        1      2      2      0      1
  MKI67IP WILD-TYPE    117    134    113     40     70
D1162V9, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               1               117
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               1                70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MKI67IP MUTATED        0      3      1      2      0
  MKI67IP WILD-TYPE     48    106    129     99     92
D1162V10, multiclass
        clus
vv       MKI67IP MUTATED MKI67IP WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               1               129
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1163) Variable = TMEM63A MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM63A MUTATED        1      0      2     12
  TMEM63A WILD-TYPE    134     92    170    164
D1163V1, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM63A MUTATED        8      1      3
  TMEM63A WILD-TYPE    207    154    159
D1163V2, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               8               207
  CLUS_2               1               154
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMEM63A MUTATED        3      8      1      0
  TMEM63A WILD-TYPE    132    116    124     60
D1163V3, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               3               132
  CLUS_2               8               116
  CLUS_3               1               124
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM63A MUTATED        6      5      1
  TMEM63A WILD-TYPE    247     97     88
D1163V4, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               6               247
  CLUS_2               5                97
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM63A MUTATED        3      6      5
  TMEM63A WILD-TYPE    161    241    138
D1163V5, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               3               161
  CLUS_2               6               241
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM63A MUTATED        1      2      6      2      3
  TMEM63A WILD-TYPE    120    102     85    119    114
D1163V6, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               6                85
  CLUS_4               2               119
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  TMEM63A MUTATED        2      9      4
  TMEM63A WILD-TYPE    157    242    161
D1163V7, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               2               157
  CLUS_2               9               242
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM63A MUTATED        0      5      7      1      2
  TMEM63A WILD-TYPE    118    126    144     93     79
D1163V8, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               126
  CLUS_3               7               144
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM63A MUTATED        1      3      2      1      5
  TMEM63A WILD-TYPE    117    133    113     39     66
D1163V9, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               1               117
  CLUS_2               3               133
  CLUS_3               2               113
  CLUS_4               1                39
  CLUS_5               5                66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMEM63A MUTATED        0      2      8      1      1
  TMEM63A WILD-TYPE     48    107    122    100     91
D1163V10, multiclass
        clus
vv       TMEM63A MUTATED TMEM63A WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               8               122
  CLUS_4               1               100
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1164) Variable = ZCCHC2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCCHC2 MUTATED        1      0      2      5
  ZCCHC2 WILD-TYPE    134     92    170    171
D1164V1, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              2              170
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC2 MUTATED        3      3      1
  ZCCHC2 WILD-TYPE    212    152    161
D1164V2, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              3              152
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZCCHC2 MUTATED        2      5      0      0
  ZCCHC2 WILD-TYPE    133    119    125     60
D1164V3, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              5              119
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC2 MUTATED        4      3      0
  ZCCHC2 WILD-TYPE    249     99     89
D1164V4, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              3               99
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC2 MUTATED        2      4      0
  ZCCHC2 WILD-TYPE    162    243    143
D1164V5, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              4              243
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC2 MUTATED        1      2      1      2      0
  ZCCHC2 WILD-TYPE    120    102     90    119    117
D1164V6, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              1               90
  CLUS_4              2              119
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZCCHC2 MUTATED        2      5      1
  ZCCHC2 WILD-TYPE    157    246    164
D1164V7, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              5              246
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC2 MUTATED        1      1      4      2      0
  ZCCHC2 WILD-TYPE    117    130    147     92     81
D1164V8, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              130
  CLUS_3              4              147
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC2 MUTATED        1      3      0      1      1
  ZCCHC2 WILD-TYPE    117    133    115     39     70
D1164V9, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              1               70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZCCHC2 MUTATED        1      0      3      0      2
  ZCCHC2 WILD-TYPE     47    109    127    101     90
D1164V10, multiclass
        clus
vv       ZCCHC2 MUTATED ZCCHC2 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              0              109
  CLUS_3              3              127
  CLUS_4              0              101
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1165) Variable = EPHB6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHB6 MUTATED        3      2      2     15
  EPHB6 WILD-TYPE    132     90    170    161
D1165V1, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHB6 MUTATED       13      4      3
  EPHB6 WILD-TYPE    202    151    159
D1165V2, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             4             151
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPHB6 MUTATED        6      9      2      1
  EPHB6 WILD-TYPE    129    115    123     59
D1165V3, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             9             115
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHB6 MUTATED       11      6      1
  EPHB6 WILD-TYPE    242     96     88
D1165V4, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             6              96
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHB6 MUTATED        5     11      4
  EPHB6 WILD-TYPE    159    236    139
D1165V5, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             5             159
  CLUS_2            11             236
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHB6 MUTATED        2      3     10      2      3
  EPHB6 WILD-TYPE    119    101     81    119    114
D1165V6, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             3             101
  CLUS_3            10              81
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  EPHB6 MUTATED        5     11      6
  EPHB6 WILD-TYPE    154    240    159
D1165V7, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            11             240
  CLUS_3             6             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHB6 MUTATED        1      8      8      2      3
  EPHB6 WILD-TYPE    117    123    143     92     78
D1165V8, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             123
  CLUS_3             8             143
  CLUS_4             2              92
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHB6 MUTATED        3      3      4      2      5
  EPHB6 WILD-TYPE    115    133    111     38     66
D1165V9, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             3             133
  CLUS_3             4             111
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPHB6 MUTATED        1      5      8      2      1
  EPHB6 WILD-TYPE     47    104    122     99     91
D1165V10, multiclass
        clus
vv       EPHB6 MUTATED EPHB6 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             8             122
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1166) Variable = GPR1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR1 MUTATED        1      0      2      4
  GPR1 WILD-TYPE    134     92    170    172
D1166V1, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            2            170
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPR1 MUTATED        6      1      0
  GPR1 WILD-TYPE    209    154    162
D1166V2, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR1 MUTATED        4      0      1      0
  GPR1 WILD-TYPE    131    124    124     60
D1166V3, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            0            124
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPR1 MUTATED        4      0      1
  GPR1 WILD-TYPE    249    102     88
D1166V4, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPR1 MUTATED        1      4      1
  GPR1 WILD-TYPE    163    243    142
D1166V5, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            4            243
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR1 MUTATED        0      1      4      0      1
  GPR1 WILD-TYPE    121    103     87    121    116
D1166V6, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GPR1 MUTATED        1      4      2
  GPR1 WILD-TYPE    158    247    163
D1166V7, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR1 MUTATED        1      4      0      1      1
  GPR1 WILD-TYPE    117    127    151     93     80
D1166V8, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            0            151
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR1 MUTATED        1      1      2      2      0
  GPR1 WILD-TYPE    117    135    113     38     71
D1166V9, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            2            113
  CLUS_4            2             38
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR1 MUTATED        1      1      2      1      1
  GPR1 WILD-TYPE     47    108    128    100     91
D1166V10, multiclass
        clus
vv       GPR1 MUTATED GPR1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            1            108
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1167) Variable = PCDHGC3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCDHGC3 MUTATED        3      0      2     10
  PCDHGC3 WILD-TYPE    132     92    170    166
D1167V1, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               0                92
  CLUS_3               2               170
  CLUS_4              10               166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PCDHGC3 MUTATED        8      2      2
  PCDHGC3 WILD-TYPE    207    153    160
D1167V2, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               8               207
  CLUS_2               2               153
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCDHGC3 MUTATED        7      5      0      1
  PCDHGC3 WILD-TYPE    128    119    125     59
D1167V3, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               7               128
  CLUS_2               5               119
  CLUS_3               0               125
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PCDHGC3 MUTATED       11      2      0
  PCDHGC3 WILD-TYPE    242    100     89
D1167V4, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1              11               242
  CLUS_2               2               100
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PCDHGC3 MUTATED        1      9      4
  PCDHGC3 WILD-TYPE    163    238    139
D1167V5, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               9               238
  CLUS_3               4               139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDHGC3 MUTATED        2      2      6      1      3
  PCDHGC3 WILD-TYPE    119    102     85    120    114
D1167V6, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               3               114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  PCDHGC3 MUTATED        2     11      2
  PCDHGC3 WILD-TYPE    157    240    163
D1167V7, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               2               157
  CLUS_2              11               240
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDHGC3 MUTATED        1      6      5      1      2
  PCDHGC3 WILD-TYPE    117    125    146     93     79
D1167V8, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               6               125
  CLUS_3               5               146
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDHGC3 MUTATED        1      4      2      0      3
  PCDHGC3 WILD-TYPE    117    132    113     40     68
D1167V9, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               132
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDHGC3 MUTATED        0      3      4      2      1
  PCDHGC3 WILD-TYPE     48    106    126     99     91
D1167V10, multiclass
        clus
vv       PCDHGC3 MUTATED PCDHGC3 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               4               126
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1168) Variable = CACNA1H MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1H MUTATED        7      4     10     18
  CACNA1H WILD-TYPE    128     88    162    158
D1168V1, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               7               128
  CLUS_2               4                88
  CLUS_3              10               162
  CLUS_4              18               158
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1H MUTATED       26      4      7
  CACNA1H WILD-TYPE    189    151    155
D1168V2, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1              26               189
  CLUS_2               4               151
  CLUS_3               7               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CACNA1H MUTATED        9     11      5      4
  CACNA1H WILD-TYPE    126    113    120     56
D1168V3, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               9               126
  CLUS_2              11               113
  CLUS_3               5               120
  CLUS_4               4                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1H MUTATED       18      8      3
  CACNA1H WILD-TYPE    235     94     86
D1168V4, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1              18               235
  CLUS_2               8                94
  CLUS_3               3                86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1H MUTATED        5     27      7
  CACNA1H WILD-TYPE    159    220    136
D1168V5, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               5               159
  CLUS_2              27               220
  CLUS_3               7               136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1H MUTATED        4      6     18      5      6
  CACNA1H WILD-TYPE    117     98     73    116    111
D1168V6, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               4               117
  CLUS_2               6                98
  CLUS_3              18                73
  CLUS_4               5               116
  CLUS_5               6               111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CACNA1H MUTATED        8     29      3
  CACNA1H WILD-TYPE    151    222    162
D1168V7, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               8               151
  CLUS_2              29               222
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1H MUTATED        3     18     15      3      1
  CACNA1H WILD-TYPE    115    113    136     91     80
D1168V8, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               3               115
  CLUS_2              18               113
  CLUS_3              15               136
  CLUS_4               3                91
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1H MUTATED        5     14      3      4      6
  CACNA1H WILD-TYPE    113    122    112     36     65
D1168V9, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               5               113
  CLUS_2              14               122
  CLUS_3               3               112
  CLUS_4               4                36
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CACNA1H MUTATED        3     13     12      1      3
  CACNA1H WILD-TYPE     45     96    118    100     89
D1168V10, multiclass
        clus
vv       CACNA1H MUTATED CACNA1H WILD-TYPE
  CLUS_1               3                45
  CLUS_2              13                96
  CLUS_3              12               118
  CLUS_4               1               100
  CLUS_5               3                89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1169) Variable = RPS6KA5 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPS6KA5 MUTATED        1      0      3      5
  RPS6KA5 WILD-TYPE    134     92    169    171
D1169V1, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA5 MUTATED        6      2      1
  RPS6KA5 WILD-TYPE    209    153    161
D1169V2, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RPS6KA5 MUTATED        4      2      0      0
  RPS6KA5 WILD-TYPE    131    122    125     60
D1169V3, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA5 MUTATED        6      0      0
  RPS6KA5 WILD-TYPE    247    102     89
D1169V4, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               0               102
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA5 MUTATED        3      5      1
  RPS6KA5 WILD-TYPE    161    242    142
D1169V5, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               3               161
  CLUS_2               5               242
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA5 MUTATED        0      1      4      3      1
  RPS6KA5 WILD-TYPE    121    103     87    118    116
D1169V6, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               4                87
  CLUS_4               3               118
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  RPS6KA5 MUTATED        2      6      1
  RPS6KA5 WILD-TYPE    157    245    164
D1169V7, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               6               245
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA5 MUTATED        0      6      0      2      1
  RPS6KA5 WILD-TYPE    118    125    151     92     80
D1169V8, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               6               125
  CLUS_3               0               151
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA5 MUTATED        2      5      1      0      0
  RPS6KA5 WILD-TYPE    116    131    114     40     71
D1169V9, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               131
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RPS6KA5 MUTATED        0      5      0      1      2
  RPS6KA5 WILD-TYPE     48    104    130    100     90
D1169V10, multiclass
        clus
vv       RPS6KA5 MUTATED RPS6KA5 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               0               130
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1170) Variable = NAGPA MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAGPA MUTATED        1      1      2      5
  NAGPA WILD-TYPE    134     91    170    171
D1170V1, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAGPA MUTATED        6      2      1
  NAGPA WILD-TYPE    209    153    161
D1170V2, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NAGPA MUTATED        2      2      1      1
  NAGPA WILD-TYPE    133    122    124     59
D1170V3, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAGPA MUTATED        3      2      1
  NAGPA WILD-TYPE    250    100     88
D1170V4, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             3             250
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAGPA MUTATED        1      4      3
  NAGPA WILD-TYPE    163    243    140
D1170V5, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAGPA MUTATED        0      1      4      1      2
  NAGPA WILD-TYPE    121    103     87    120    115
D1170V6, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NAGPA MUTATED        2      6      1
  NAGPA WILD-TYPE    157    245    164
D1170V7, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             2             157
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAGPA MUTATED        2      2      3      1      1
  NAGPA WILD-TYPE    116    129    148     93     80
D1170V8, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             129
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAGPA MUTATED        1      3      1      0      4
  NAGPA WILD-TYPE    117    133    114     40     67
D1170V9, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NAGPA MUTATED        0      5      3      0      1
  NAGPA WILD-TYPE     48    104    127    101     91
D1170V10, multiclass
        clus
vv       NAGPA MUTATED NAGPA WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1171) Variable = KCNJ6 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ6 MUTATED        1      0      2      9
  KCNJ6 WILD-TYPE    134     92    170    167
D1171V1, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNJ6 MUTATED        9      0      1
  KCNJ6 WILD-TYPE    206    155    161
D1171V2, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNJ6 MUTATED        5      4      0      0
  KCNJ6 WILD-TYPE    130    120    125     60
D1171V3, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNJ6 MUTATED        7      2      0
  KCNJ6 WILD-TYPE    246    100     89
D1171V4, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNJ6 MUTATED        3      6      2
  KCNJ6 WILD-TYPE    161    241    141
D1171V5, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             6             241
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ6 MUTATED        0      1      7      2      1
  KCNJ6 WILD-TYPE    121    103     84    119    116
D1171V6, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNJ6 MUTATED        0     10      2
  KCNJ6 WILD-TYPE    159    241    163
D1171V7, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            10             241
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ6 MUTATED        0      7      4      0      1
  KCNJ6 WILD-TYPE    118    124    147     94     80
D1171V8, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ6 MUTATED        0      6      1      1      2
  KCNJ6 WILD-TYPE    118    130    114     39     69
D1171V9, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNJ6 MUTATED        1      6      2      1      0
  KCNJ6 WILD-TYPE     47    103    128    100     92
D1171V10, multiclass
        clus
vv       KCNJ6 MUTATED KCNJ6 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1172) Variable = PIGZ MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGZ MUTATED        2      1      1      6
  PIGZ WILD-TYPE    133     91    171    170
D1172V1, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGZ MUTATED        6      1      0
  PIGZ WILD-TYPE    209    154    162
D1172V2, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            6            209
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PIGZ MUTATED        2      3      2      0
  PIGZ WILD-TYPE    133    121    123     60
D1172V3, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGZ MUTATED        4      1      2
  PIGZ WILD-TYPE    249    101     87
D1172V4, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            4            249
  CLUS_2            1            101
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGZ MUTATED        1      5      3
  PIGZ WILD-TYPE    163    242    140
D1172V5, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGZ MUTATED        0      3      3      0      3
  PIGZ WILD-TYPE    121    101     88    121    114
D1172V6, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PIGZ MUTATED        1      6      3
  PIGZ WILD-TYPE    158    245    162
D1172V7, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGZ MUTATED        1      4      3      0      2
  PIGZ WILD-TYPE    117    127    148     94     79
D1172V8, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGZ MUTATED        0      3      1      0      1
  PIGZ WILD-TYPE    118    133    114     40     70
D1172V9, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            133
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PIGZ MUTATED        0      3      2      0      0
  PIGZ WILD-TYPE     48    106    128    101     92
D1172V10, multiclass
        clus
vv       PIGZ MUTATED PIGZ WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1173) Variable = DBF4 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DBF4 MUTATED        0      1      3      5
  DBF4 WILD-TYPE    135     91    169    171
D1173V1, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DBF4 MUTATED        5      2      1
  DBF4 WILD-TYPE    210    153    161
D1173V2, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DBF4 MUTATED        1      4      1      0
  DBF4 WILD-TYPE    134    120    124     60
D1173V3, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            4            120
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DBF4 MUTATED        2      3      1
  DBF4 WILD-TYPE    251     99     88
D1173V4, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            2            251
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DBF4 MUTATED        2      4      0
  DBF4 WILD-TYPE    162    243    143
D1173V5, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DBF4 MUTATED        0      2      2      2      0
  DBF4 WILD-TYPE    121    102     89    119    117
D1173V6, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            2            102
  CLUS_3            2             89
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DBF4 MUTATED        3      6      0
  DBF4 WILD-TYPE    156    245    165
D1173V7, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            6            245
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DBF4 MUTATED        0      3      4      2      0
  DBF4 WILD-TYPE    118    128    147     92     81
D1173V8, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DBF4 MUTATED        2      3      0      0      2
  DBF4 WILD-TYPE    116    133    115     40     69
D1173V9, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            133
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DBF4 MUTATED        0      3      2      0      2
  DBF4 WILD-TYPE     48    106    128    101     90
D1173V10, multiclass
        clus
vv       DBF4 MUTATED DBF4 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1174) Variable = DOK7 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOK7 MUTATED        1      1      2      3
  DOK7 WILD-TYPE    134     91    170    173
D1174V1, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK7 MUTATED        3      2      0
  DOK7 WILD-TYPE    212    153    162
D1174V2, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOK7 MUTATED        2      1      0      1
  DOK7 WILD-TYPE    133    123    125     59
D1174V3, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK7 MUTATED        3      1      0
  DOK7 WILD-TYPE    250    101     89
D1174V4, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK7 MUTATED        2      5      0
  DOK7 WILD-TYPE    162    242    143
D1174V5, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK7 MUTATED        2      2      3      0      0
  DOK7 WILD-TYPE    119    102     88    121    117
D1174V6, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  DOK7 MUTATED        1      5      1
  DOK7 WILD-TYPE    158    246    164
D1174V7, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            5            246
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK7 MUTATED        2      4      1      0      0
  DOK7 WILD-TYPE    116    127    150     94     81
D1174V8, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            1            150
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK7 MUTATED        0      4      1      0      0
  DOK7 WILD-TYPE    118    132    114     40     71
D1174V9, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOK7 MUTATED        0      3      1      1      0
  DOK7 WILD-TYPE     48    106    129    100     92
D1174V10, multiclass
        clus
vv       DOK7 MUTATED DOK7 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            1            129
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1175) Variable = HECA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HECA MUTATED        0      2      3     14
  HECA WILD-TYPE    135     90    169    162
D1175V1, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HECA MUTATED       11      2      4
  HECA WILD-TYPE    204    153    158
D1175V2, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1           11            204
  CLUS_2            2            153
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HECA MUTATED        4      5      1      2
  HECA WILD-TYPE    131    119    124     58
D1175V3, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            4            131
  CLUS_2            5            119
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HECA MUTATED        9      3      0
  HECA WILD-TYPE    244     99     89
D1175V4, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            9            244
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HECA MUTATED        2     13      3
  HECA WILD-TYPE    162    234    140
D1175V5, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            2            162
  CLUS_2           13            234
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HECA MUTATED        3      6      4      2      3
  HECA WILD-TYPE    118     98     87    119    114
D1175V6, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            3            118
  CLUS_2            6             98
  CLUS_3            4             87
  CLUS_4            2            119
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  HECA MUTATED        5     11      3
  HECA WILD-TYPE    154    240    162
D1175V7, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            5            154
  CLUS_2           11            240
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HECA MUTATED        2      6      8      2      1
  HECA WILD-TYPE    116    125    143     92     80
D1175V8, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            2            116
  CLUS_2            6            125
  CLUS_3            8            143
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HECA MUTATED        4      4      1      0      4
  HECA WILD-TYPE    114    132    114     40     67
D1175V9, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            4            114
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HECA MUTATED        1      2      6      2      2
  HECA WILD-TYPE     47    107    124     99     90
D1175V10, multiclass
        clus
vv       HECA MUTATED HECA WILD-TYPE
  CLUS_1            1             47
  CLUS_2            2            107
  CLUS_3            6            124
  CLUS_4            2             99
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1176) Variable = IGBP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGBP1 MUTATED        0      0      1      5
  IGBP1 WILD-TYPE    135     92    171    171
D1176V1, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGBP1 MUTATED        3      1      2
  IGBP1 WILD-TYPE    212    154    160
D1176V2, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGBP1 MUTATED        1      4      0      0
  IGBP1 WILD-TYPE    134    120    125     60
D1176V3, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGBP1 MUTATED        2      3      0
  IGBP1 WILD-TYPE    251     99     89
D1176V4, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGBP1 MUTATED        3      0      2
  IGBP1 WILD-TYPE    161    247    141
D1176V5, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             0             247
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGBP1 MUTATED        0      0      1      1      3
  IGBP1 WILD-TYPE    121    104     90    120    114
D1176V6, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             1              90
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  IGBP1 MUTATED        3      2      1
  IGBP1 WILD-TYPE    156    249    164
D1176V7, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             2             249
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGBP1 MUTATED        0      0      4      1      1
  IGBP1 WILD-TYPE    118    131    147     93     80
D1176V8, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             131
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGBP1 MUTATED        3      1      1      0      1
  IGBP1 WILD-TYPE    115    135    114     40     70
D1176V9, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGBP1 MUTATED        0      0      4      1      1
  IGBP1 WILD-TYPE     48    109    126    100     91
D1176V10, multiclass
        clus
vv       IGBP1 MUTATED IGBP1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             0             109
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1177) Variable = INSM2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INSM2 MUTATED        0      0      1     12
  INSM2 WILD-TYPE    135     92    171    164
D1177V1, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INSM2 MUTATED        9      0      3
  INSM2 WILD-TYPE    206    155    159
D1177V2, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  INSM2 MUTATED        5      5      1      1
  INSM2 WILD-TYPE    130    119    124     59
D1177V3, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             5             119
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INSM2 MUTATED        8      2      2
  INSM2 WILD-TYPE    245    100     87
D1177V4, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INSM2 MUTATED        0      8      4
  INSM2 WILD-TYPE    164    239    139
D1177V5, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             8             239
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSM2 MUTATED        0      1      7      0      4
  INSM2 WILD-TYPE    121    103     84    121    113
D1177V6, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  INSM2 MUTATED        1      8      4
  INSM2 WILD-TYPE    158    243    161
D1177V7, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             8             243
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSM2 MUTATED        3      6      2      0      2
  INSM2 WILD-TYPE    115    125    149     94     79
D1177V8, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             6             125
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSM2 MUTATED        0      4      1      1      5
  INSM2 WILD-TYPE    118    132    114     39     66
D1177V9, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  INSM2 MUTATED        0      4      4      3      0
  INSM2 WILD-TYPE     48    105    126     98     92
D1177V10, multiclass
        clus
vv       INSM2 MUTATED INSM2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1178) Variable = SAE1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SAE1 MUTATED        0      3      0      3
  SAE1 WILD-TYPE    135     89    172    173
D1178V1, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            3             89
  CLUS_3            0            172
  CLUS_4            3            173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SAE1 MUTATED        4      0      2
  SAE1 WILD-TYPE    211    155    160
D1178V2, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            4            211
  CLUS_2            0            155
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SAE1 MUTATED        1      1      0      2
  SAE1 WILD-TYPE    134    123    125     58
D1178V3, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1            123
  CLUS_3            0            125
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SAE1 MUTATED        3      1      0
  SAE1 WILD-TYPE    250    101     89
D1178V4, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SAE1 MUTATED        0      4      2
  SAE1 WILD-TYPE    164    243    141
D1178V5, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            4            243
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAE1 MUTATED        1      1      3      0      1
  SAE1 WILD-TYPE    120    103     88    121    116
D1178V6, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  SAE1 MUTATED        0      4      2
  SAE1 WILD-TYPE    159    247    163
D1178V7, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAE1 MUTATED        0      3      2      0      1
  SAE1 WILD-TYPE    118    128    149     94     80
D1178V8, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAE1 MUTATED        0      4      1      0      0
  SAE1 WILD-TYPE    118    132    114     40     71
D1178V9, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            0             40
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SAE1 MUTATED        0      4      1      0      0
  SAE1 WILD-TYPE     48    105    129    101     92
D1178V10, multiclass
        clus
vv       SAE1 MUTATED SAE1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1179) Variable = SUCLG2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SUCLG2 MUTATED        0      1      1      6
  SUCLG2 WILD-TYPE    135     91    171    170
D1179V1, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              6              170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SUCLG2 MUTATED        5      0      1
  SUCLG2 WILD-TYPE    210    155    161
D1179V2, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SUCLG2 MUTATED        2      2      1      1
  SUCLG2 WILD-TYPE    133    122    124     59
D1179V3, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SUCLG2 MUTATED        4      1      1
  SUCLG2 WILD-TYPE    249    101     88
D1179V4, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SUCLG2 MUTATED        1      5      2
  SUCLG2 WILD-TYPE    163    242    141
D1179V5, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SUCLG2 MUTATED        1      1      4      0      2
  SUCLG2 WILD-TYPE    120    103     87    121    115
D1179V6, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              4               87
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SUCLG2 MUTATED        1      5      2
  SUCLG2 WILD-TYPE    158    246    163
D1179V7, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SUCLG2 MUTATED        1      4      2      0      1
  SUCLG2 WILD-TYPE    117    127    149     94     80
D1179V8, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              4              127
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SUCLG2 MUTATED        0      3      1      0      2
  SUCLG2 WILD-TYPE    118    133    114     40     69
D1179V9, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SUCLG2 MUTATED        0      4      2      0      0
  SUCLG2 WILD-TYPE     48    105    128    101     92
D1179V10, multiclass
        clus
vv       SUCLG2 MUTATED SUCLG2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              4              105
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1180) Variable = CDC6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC6 MUTATED        3      2      3      5
  CDC6 WILD-TYPE    132     90    169    171
D1180V1, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2             90
  CLUS_3            3            169
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDC6 MUTATED        3      4      5
  CDC6 WILD-TYPE    212    151    157
D1180V2, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            4            151
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CDC6 MUTATED        2      6      1      1
  CDC6 WILD-TYPE    133    118    124     59
D1180V3, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            6            118
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDC6 MUTATED        5      4      1
  CDC6 WILD-TYPE    248     98     88
D1180V4, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDC6 MUTATED        4      3      5
  CDC6 WILD-TYPE    160    244    138
D1180V5, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            4            160
  CLUS_2            3            244
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC6 MUTATED        2      1      2      3      4
  CDC6 WILD-TYPE    119    103     89    118    113
D1180V6, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            3            118
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CDC6 MUTATED        3      5      5
  CDC6 WILD-TYPE    156    246    160
D1180V7, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            5            246
  CLUS_3            5            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC6 MUTATED        3      1      4      3      2
  CDC6 WILD-TYPE    115    130    147     91     79
D1180V8, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            1            130
  CLUS_3            4            147
  CLUS_4            3             91
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC6 MUTATED        2      0      6      1      2
  CDC6 WILD-TYPE    116    136    109     39     69
D1180V9, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            0            136
  CLUS_3            6            109
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CDC6 MUTATED        0      0      3      5      3
  CDC6 WILD-TYPE     48    109    127     96     89
D1180V10, multiclass
        clus
vv       CDC6 MUTATED CDC6 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            0            109
  CLUS_3            3            127
  CLUS_4            5             96
  CLUS_5            3             89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1181) Variable = CUL5 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUL5 MUTATED        1      2      0     11
  CUL5 WILD-TYPE    134     90    172    165
D1181V1, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL5 MUTATED       10      0      3
  CUL5 WILD-TYPE    205    155    159
D1181V2, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CUL5 MUTATED        5      3      3      1
  CUL5 WILD-TYPE    130    121    122     59
D1181V3, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3            121
  CLUS_3            3            122
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL5 MUTATED        9      0      3
  CUL5 WILD-TYPE    244    102     86
D1181V4, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            0            102
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL5 MUTATED        1      8      4
  CUL5 WILD-TYPE    163    239    139
D1181V5, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL5 MUTATED        2      3      6      0      2
  CUL5 WILD-TYPE    119    101     85    121    115
D1181V6, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CUL5 MUTATED        0     11      4
  CUL5 WILD-TYPE    159    240    161
D1181V7, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            0            159
  CLUS_2           11            240
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL5 MUTATED        2      7      5      0      1
  CUL5 WILD-TYPE    116    124    146     94     80
D1181V8, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            7            124
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL5 MUTATED        0      4      3      1      4
  CUL5 WILD-TYPE    118    132    112     39     67
D1181V9, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CUL5 MUTATED        3      6      2      1      0
  CUL5 WILD-TYPE     45    103    128    100     92
D1181V10, multiclass
        clus
vv       CUL5 MUTATED CUL5 WILD-TYPE
  CLUS_1            3             45
  CLUS_2            6            103
  CLUS_3            2            128
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1182) Variable = SERPINB8 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB8 MUTATED        1      0      0      7
  SERPINB8 WILD-TYPE    134     92    172    169
D1182V1, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                0                172
  CLUS_4                7                169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB8 MUTATED        4      0      3
  SERPINB8 WILD-TYPE    211    155    159
D1182V2, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                4                211
  CLUS_2                0                155
  CLUS_3                3                159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SERPINB8 MUTATED        2      3      0      1
  SERPINB8 WILD-TYPE    133    121    125     59
D1182V3, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                2                133
  CLUS_2                3                121
  CLUS_3                0                125
  CLUS_4                1                 59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB8 MUTATED        4      2      0
  SERPINB8 WILD-TYPE    249    100     89
D1182V4, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                4                249
  CLUS_2                2                100
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB8 MUTATED        2      5      0
  SERPINB8 WILD-TYPE    162    242    143
D1182V5, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                2                162
  CLUS_2                5                242
  CLUS_3                0                143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB8 MUTATED        0      2      4      0      1
  SERPINB8 WILD-TYPE    121    102     87    121    116
D1182V6, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                4                 87
  CLUS_4                0                121
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SERPINB8 MUTATED        1      5      2
  SERPINB8 WILD-TYPE    158    246    163
D1182V7, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                1                158
  CLUS_2                5                246
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB8 MUTATED        1      4      2      0      1
  SERPINB8 WILD-TYPE    117    127    149     94     80
D1182V8, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                4                127
  CLUS_3                2                149
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB8 MUTATED        0      3      0      0      3
  SERPINB8 WILD-TYPE    118    133    115     40     68
D1182V9, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                0                118
  CLUS_2                3                133
  CLUS_3                0                115
  CLUS_4                0                 40
  CLUS_5                3                 68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SERPINB8 MUTATED        0      1      4      1      0
  SERPINB8 WILD-TYPE     48    108    126    100     92
D1182V10, multiclass
        clus
vv       SERPINB8 MUTATED SERPINB8 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                1                108
  CLUS_3                4                126
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1183) Variable = HSP90AB1 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSP90AB1 MUTATED        4      1      2      6
  HSP90AB1 WILD-TYPE    131     91    170    170
D1183V1, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                4                131
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AB1 MUTATED        9      3      0
  HSP90AB1 WILD-TYPE    206    152    162
D1183V2, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                3                152
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HSP90AB1 MUTATED        6      5      0      0
  HSP90AB1 WILD-TYPE    129    119    125     60
D1183V3, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                6                129
  CLUS_2                5                119
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AB1 MUTATED        7      4      0
  HSP90AB1 WILD-TYPE    246     98     89
D1183V4, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                7                246
  CLUS_2                4                 98
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AB1 MUTATED        3      8      2
  HSP90AB1 WILD-TYPE    161    239    141
D1183V5, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                3                161
  CLUS_2                8                239
  CLUS_3                2                141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AB1 MUTATED        1      2      4      2      4
  HSP90AB1 WILD-TYPE    120    102     87    119    113
D1183V6, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                2                102
  CLUS_3                4                 87
  CLUS_4                2                119
  CLUS_5                4                113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  HSP90AB1 MUTATED        2     11      0
  HSP90AB1 WILD-TYPE    157    240    165
D1183V7, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                2                157
  CLUS_2               11                240
  CLUS_3                0                165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AB1 MUTATED        1      5      5      2      0
  HSP90AB1 WILD-TYPE    117    126    146     92     81
D1183V8, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                5                126
  CLUS_3                5                146
  CLUS_4                2                 92
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AB1 MUTATED        1      6      1      2      2
  HSP90AB1 WILD-TYPE    117    130    114     38     69
D1183V9, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                6                130
  CLUS_3                1                114
  CLUS_4                2                 38
  CLUS_5                2                 69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HSP90AB1 MUTATED        0      5      4      1      2
  HSP90AB1 WILD-TYPE     48    104    126    100     90
D1183V10, multiclass
        clus
vv       HSP90AB1 MUTATED HSP90AB1 WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                4                126
  CLUS_4                1                100
  CLUS_5                2                 90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1184) Variable = SMARCA4 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        6      3      6     23
  SMARCA4 WILD-TYPE    129     89    166    153
D1184V1, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               6               129
  CLUS_2               3                89
  CLUS_3               6               166
  CLUS_4              23               153
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED       19     12      4
  SMARCA4 WILD-TYPE    196    143    158
D1184V2, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1              19               196
  CLUS_2              12               143
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCA4 MUTATED        9     16      0      4
  SMARCA4 WILD-TYPE    126    108    125     56
D1184V3, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               9               126
  CLUS_2              16               108
  CLUS_3               0               125
  CLUS_4               4                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED       19      8      2
  SMARCA4 WILD-TYPE    234     94     87
D1184V4, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1              19               234
  CLUS_2               8                94
  CLUS_3               2                87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED       10     21      5
  SMARCA4 WILD-TYPE    154    226    138
D1184V5, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1              10               154
  CLUS_2              21               226
  CLUS_3               5               138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCA4 MUTATED        5     10      8      9      4
  SMARCA4 WILD-TYPE    116     94     83    112    113
D1184V6, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               5               116
  CLUS_2              10                94
  CLUS_3               8                83
  CLUS_4               9               112
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCA4 MUTATED       10     25      3
  SMARCA4 WILD-TYPE    149    226    162
D1184V7, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1              10               149
  CLUS_2              25               226
  CLUS_3               3               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCA4 MUTATED        4     15      9      9      1
  SMARCA4 WILD-TYPE    114    116    142     85     80
D1184V8, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               4               114
  CLUS_2              15               116
  CLUS_3               9               142
  CLUS_4               9                85
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCA4 MUTATED        7     17      1      0      6
  SMARCA4 WILD-TYPE    111    119    114     40     65
D1184V9, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               7               111
  CLUS_2              17               119
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCA4 MUTATED        2     13      7      2      7
  SMARCA4 WILD-TYPE     46     96    123     99     85
D1184V10, multiclass
        clus
vv       SMARCA4 MUTATED SMARCA4 WILD-TYPE
  CLUS_1               2                46
  CLUS_2              13                96
  CLUS_3               7               123
  CLUS_4               2                99
  CLUS_5               7                85
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1185) Variable = SETD2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        4      1      4     15
  SETD2 WILD-TYPE    131     91    168    161
D1185V1, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             1              91
  CLUS_3             4             168
  CLUS_4            15             161
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED       10      7      3
  SETD2 WILD-TYPE    205    148    159
D1185V2, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             7             148
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETD2 MUTATED        5      6      3      4
  SETD2 WILD-TYPE    130    118    122     56
D1185V3, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             6             118
  CLUS_3             3             122
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED       13      1      4
  SETD2 WILD-TYPE    240    101     85
D1185V4, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             1             101
  CLUS_3             4              85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        9     11      3
  SETD2 WILD-TYPE    155    236    140
D1185V5, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             9             155
  CLUS_2            11             236
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD2 MUTATED        1      2      9      7      4
  SETD2 WILD-TYPE    120    102     82    114    113
D1185V6, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             2             102
  CLUS_3             9              82
  CLUS_4             7             114
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SETD2 MUTATED        7     13      4
  SETD2 WILD-TYPE    152    238    161
D1185V7, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             7             152
  CLUS_2            13             238
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD2 MUTATED        1      9      7      6      1
  SETD2 WILD-TYPE    117    122    144     88     80
D1185V8, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             6              88
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD2 MUTATED        5      4      2      2      4
  SETD2 WILD-TYPE    113    132    113     38     67
D1185V9, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETD2 MUTATED        2      5      4      1      5
  SETD2 WILD-TYPE     46    104    126    100     87
D1185V10, multiclass
        clus
vv       SETD2 MUTATED SETD2 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             5              87
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1186) Variable = ZC3H8 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H8 MUTATED        1      1      2      1
  ZC3H8 WILD-TYPE    134     91    170    175
D1186V1, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             1             175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H8 MUTATED        3      1      0
  ZC3H8 WILD-TYPE    212    154    162
D1186V2, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZC3H8 MUTATED        1      1      1      2
  ZC3H8 WILD-TYPE    134    123    124     58
D1186V3, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1             123
  CLUS_3             1             124
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H8 MUTATED        2      2      1
  ZC3H8 WILD-TYPE    251    100     88
D1186V4, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             2             100
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H8 MUTATED        1      3      1
  ZC3H8 WILD-TYPE    163    244    142
D1186V5, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             3             244
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H8 MUTATED        2      0      2      1      0
  ZC3H8 WILD-TYPE    119    104     89    120    117
D1186V6, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZC3H8 MUTATED        2      2      1
  ZC3H8 WILD-TYPE    157    249    164
D1186V7, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             2             157
  CLUS_2             2             249
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H8 MUTATED        1      1      1      1      1
  ZC3H8 WILD-TYPE    117    130    150     93     80
D1186V8, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             130
  CLUS_3             1             150
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H8 MUTATED        1      1      1      1      0
  ZC3H8 WILD-TYPE    117    135    114     39     71
D1186V9, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             1             135
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZC3H8 MUTATED        0      1      1      1      1
  ZC3H8 WILD-TYPE     48    108    129    100     91
D1186V10, multiclass
        clus
vv       ZC3H8 MUTATED ZC3H8 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1187) Variable = NARG2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NARG2 MUTATED        1      1      1     11
  NARG2 WILD-TYPE    134     91    171    165
D1187V1, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NARG2 MUTATED        9      2      2
  NARG2 WILD-TYPE    206    153    160
D1187V2, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             9             206
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NARG2 MUTATED        5      8      0      1
  NARG2 WILD-TYPE    130    116    125     59
D1187V3, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             8             116
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NARG2 MUTATED        9      5      0
  NARG2 WILD-TYPE    244     97     89
D1187V4, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             5              97
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NARG2 MUTATED        1     11      2
  NARG2 WILD-TYPE    163    236    141
D1187V5, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            11             236
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NARG2 MUTATED        1      4      6      1      2
  NARG2 WILD-TYPE    120    100     85    120    115
D1187V6, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             1             120
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NARG2 MUTATED        1     10      3
  NARG2 WILD-TYPE    158    241    162
D1187V7, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NARG2 MUTATED        0      6      5      1      2
  NARG2 WILD-TYPE    118    125    146     93     79
D1187V8, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NARG2 MUTATED        1      5      2      0      3
  NARG2 WILD-TYPE    117    131    113     40     68
D1187V9, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             131
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NARG2 MUTATED        0      4      6      0      1
  NARG2 WILD-TYPE     48    105    124    101     91
D1187V10, multiclass
        clus
vv       NARG2 MUTATED NARG2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             6             124
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1188) Variable = C3ORF33 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C3ORF33 MUTATED        0      0      3      4
  C3ORF33 WILD-TYPE    135     92    169    172
D1188V1, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               0                92
  CLUS_3               3               169
  CLUS_4               4               172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C3ORF33 MUTATED        7      1      0
  C3ORF33 WILD-TYPE    208    154    162
D1188V2, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               1               154
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C3ORF33 MUTATED        2      4      0      0
  C3ORF33 WILD-TYPE    133    120    125     60
D1188V3, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               4               120
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C3ORF33 MUTATED        3      3      0
  C3ORF33 WILD-TYPE    250     99     89
D1188V4, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               3               250
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C3ORF33 MUTATED        1      6      1
  C3ORF33 WILD-TYPE    163    241    142
D1188V5, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               1               163
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C3ORF33 MUTATED        1      0      5      1      1
  C3ORF33 WILD-TYPE    120    104     86    120    116
D1188V6, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               0               104
  CLUS_3               5                86
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C3ORF33 MUTATED        0      6      2
  C3ORF33 WILD-TYPE    159    245    163
D1188V7, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               6               245
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C3ORF33 MUTATED        1      4      3      0      0
  C3ORF33 WILD-TYPE    117    127    148     94     81
D1188V8, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               4               127
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C3ORF33 MUTATED        0      3      2      0      3
  C3ORF33 WILD-TYPE    118    133    113     40     68
D1188V9, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               3               133
  CLUS_3               2               113
  CLUS_4               0                40
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C3ORF33 MUTATED        1      3      4      0      0
  C3ORF33 WILD-TYPE     47    106    126    101     92
D1188V10, multiclass
        clus
vv       C3ORF33 MUTATED C3ORF33 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               3               106
  CLUS_3               4               126
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1189) Variable = ZNF2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF2 MUTATED        1      2      1      5
  ZNF2 WILD-TYPE    134     90    171    171
D1189V1, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            2             90
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF2 MUTATED        5      2      1
  ZNF2 WILD-TYPE    210    153    161
D1189V2, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF2 MUTATED        4      2      0      1
  ZNF2 WILD-TYPE    131    122    125     59
D1189V3, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF2 MUTATED        5      2      0
  ZNF2 WILD-TYPE    248    100     89
D1189V4, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            2            100
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF2 MUTATED        0      7      2
  ZNF2 WILD-TYPE    164    240    141
D1189V5, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            0            164
  CLUS_2            7            240
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF2 MUTATED        2      2      4      0      1
  ZNF2 WILD-TYPE    119    102     87    121    116
D1189V6, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            2            102
  CLUS_3            4             87
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ZNF2 MUTATED        3      5      1
  ZNF2 WILD-TYPE    156    246    164
D1189V7, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            5            246
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF2 MUTATED        3      3      3      0      0
  ZNF2 WILD-TYPE    115    128    148     94     81
D1189V8, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            3            128
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF2 MUTATED        0      4      1      1      2
  ZNF2 WILD-TYPE    118    132    114     39     69
D1189V9, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            4            132
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF2 MUTATED        0      3      4      1      0
  ZNF2 WILD-TYPE     48    106    126    100     92
D1189V10, multiclass
        clus
vv       ZNF2 MUTATED ZNF2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            4            126
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1190) Variable = ETV1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ETV1 MUTATED        2      0      1      6
  ETV1 WILD-TYPE    133     92    171    170
D1190V1, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ETV1 MUTATED        7      0      0
  ETV1 WILD-TYPE    208    155    162
D1190V2, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            0            155
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ETV1 MUTATED        3      5      0      0
  ETV1 WILD-TYPE    132    119    125     60
D1190V3, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            5            119
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ETV1 MUTATED        5      3      0
  ETV1 WILD-TYPE    248     99     89
D1190V4, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ETV1 MUTATED        2      5      1
  ETV1 WILD-TYPE    162    242    142
D1190V5, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            5            242
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ETV1 MUTATED        1      0      6      0      1
  ETV1 WILD-TYPE    120    104     85    121    116
D1190V6, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            0            104
  CLUS_3            6             85
  CLUS_4            0            121
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ETV1 MUTATED        1      8      0
  ETV1 WILD-TYPE    158    243    165
D1190V7, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            8            243
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ETV1 MUTATED        2      4      3      0      0
  ETV1 WILD-TYPE    116    127    148     94     81
D1190V8, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            127
  CLUS_3            3            148
  CLUS_4            0             94
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ETV1 MUTATED        0      2      0      1      4
  ETV1 WILD-TYPE    118    134    115     39     67
D1190V9, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ETV1 MUTATED        2      4      1      0      0
  ETV1 WILD-TYPE     46    105    129    101     92
D1190V10, multiclass
        clus
vv       ETV1 MUTATED ETV1 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1191) Variable = TAF6 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF6 MUTATED        1      0      1     13
  TAF6 WILD-TYPE    134     92    171    163
D1191V1, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4           13            163
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAF6 MUTATED       11      1      1
  TAF6 WILD-TYPE    204    154    161
D1191V2, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1           11            204
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TAF6 MUTATED        5      6      2      1
  TAF6 WILD-TYPE    130    118    123     59
D1191V3, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAF6 MUTATED        9      2      3
  TAF6 WILD-TYPE    244    100     86
D1191V4, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            9            244
  CLUS_2            2            100
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAF6 MUTATED        1      8      6
  TAF6 WILD-TYPE    163    239    137
D1191V5, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF6 MUTATED        1      2      8      0      4
  TAF6 WILD-TYPE    120    102     83    121    113
D1191V6, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            8             83
  CLUS_4            0            121
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TAF6 MUTATED        3      9      3
  TAF6 WILD-TYPE    156    242    162
D1191V7, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            3            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF6 MUTATED        2      5      6      0      2
  TAF6 WILD-TYPE    116    126    145     94     79
D1191V8, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            126
  CLUS_3            6            145
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF6 MUTATED        1      5      2      1      3
  TAF6 WILD-TYPE    117    131    113     39     68
D1191V9, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            2            113
  CLUS_4            1             39
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TAF6 MUTATED        1      3      7      1      0
  TAF6 WILD-TYPE     47    106    123    100     92
D1191V10, multiclass
        clus
vv       TAF6 MUTATED TAF6 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            7            123
  CLUS_4            1            100
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1192) Variable = BCL2L2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCL2L2 MUTATED        0      0      1      4
  BCL2L2 WILD-TYPE    135     92    171    172
D1192V1, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCL2L2 MUTATED        3      0      0
  BCL2L2 WILD-TYPE    212    155    162
D1192V2, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BCL2L2 MUTATED        2      2      0      0
  BCL2L2 WILD-TYPE    133    122    125     60
D1192V3, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCL2L2 MUTATED        4      0      0
  BCL2L2 WILD-TYPE    249    102     89
D1192V4, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              4              249
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCL2L2 MUTATED        0      4      1
  BCL2L2 WILD-TYPE    164    243    142
D1192V5, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              4              243
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL2L2 MUTATED        0      0      5      0      0
  BCL2L2 WILD-TYPE    121    104     86    121    117
D1192V6, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  BCL2L2 MUTATED        0      5      0
  BCL2L2 WILD-TYPE    159    246    165
D1192V7, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              5              246
  CLUS_3              0              165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL2L2 MUTATED        0      4      1      0      0
  BCL2L2 WILD-TYPE    118    127    150     94     81
D1192V8, multiclass
        clus
vv       BCL2L2 MUTATED BCL2L2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL2L2 MUTATED        0      2      0      0      0
  BCL2L2 WILD-TYPE    118    134    115     40     71
D1192V9, multiclass
[1] "Remove cluster labels:" "BCL2L2 MUTATED"        
clus
  BCL2L2 MUTATED BCL2L2 WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8078 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8486       TCGA-BR-8588       TCGA-BR-8590       TCGA-BR-8591 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A452 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR       TCGA-BR-A4CS 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY       TCGA-BR-A4IZ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI       TCGA-BR-A4QL 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799       TCGA-CD-5800 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803       TCGA-CD-5804 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525       TCGA-CD-8526 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530       TCGA-CD-8531 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534       TCGA-CD-8535 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487       TCGA-CD-A489 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449       TCGA-CG-5716 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719       TCGA-CG-5720 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723       TCGA-CG-5724 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727       TCGA-CG-5728 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733       TCGA-CG-5734 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579       TCGA-D7-6518 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521       TCGA-D7-6522 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526       TCGA-D7-6527 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576       TCGA-D7-8578 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET       TCGA-D7-A6EV 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748       TCGA-D7-A74A 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122       TCGA-F1-6177 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448       TCGA-FP-7735 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099       TCGA-FP-8209 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631       TCGA-FP-A4BE 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7134 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243       TCGA-HU-8602 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3       TCGA-HU-A4G8 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF       TCGA-HU-A4GH 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ       TCGA-HU-A4GT 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H4 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OM       TCGA-L5-A4ON 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ       TCGA-L5-A4OR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU       TCGA-L5-A4OW 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T       TCGA-L5-A88V 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z       TCGA-L5-A891 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NG 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ       TCGA-L5-A8NK 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X       TCGA-LN-A49Y 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4       TCGA-LN-A4A5 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX       TCGA-LN-A7HY 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0       TCGA-LN-A8I1 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ       TCGA-LN-A9FR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ       TCGA-MX-A663 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-R5-A7O7 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI       TCGA-R5-A7ZR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R5-A804       TCGA-R5-A805       TCGA-R6-A6DN       TCGA-R6-A6DQ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6       TCGA-R6-A6XG 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2       TCGA-R6-A8W5 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS       TCGA-RD-A7BW 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6       TCGA-RD-A8N9 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW       TCGA-SW-A7EA 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC       TCGA-V5-A7RE 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL       TCGA-VQ-A8DU 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BCL2L2 MUTATED        0      2      0      0      0
  BCL2L2 WILD-TYPE     48    107    130    101     92
D1192V10, multiclass
[1] "Remove cluster labels:" "BCL2L2 MUTATED"        
clus
  BCL2L2 MUTATED BCL2L2 WILD-TYPE 
               2              478 
      TCGA-2H-A9GF       TCGA-2H-A9GG       TCGA-2H-A9GH       TCGA-2H-A9GI 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-2H-A9GJ       TCGA-2H-A9GK       TCGA-2H-A9GL       TCGA-2H-A9GM 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-2H-A9GN       TCGA-2H-A9GO       TCGA-2H-A9GQ       TCGA-2H-A9GR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI       TCGA-B7-A5TJ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-6452       TCGA-BR-6453 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456       TCGA-BR-6457 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6458       TCGA-BR-6563       TCGA-BR-6564       TCGA-BR-6565 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7707       TCGA-BR-7715 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7723       TCGA-BR-7851       TCGA-BR-7901 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959       TCGA-BR-8058 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8077       TCGA-BR-8078 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8080       TCGA-BR-8284       TCGA-BR-8286       TCGA-BR-8289 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297       TCGA-BR-8360 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364       TCGA-BR-8365 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8368       TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8372       TCGA-BR-8373       TCGA-BR-8380       TCGA-BR-8381 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8382       TCGA-BR-8384       TCGA-BR-8483       TCGA-BR-8485 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8486       TCGA-BR-8588       TCGA-BR-8590       TCGA-BR-8591 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8592       TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8679       TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A452 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR       TCGA-BR-A4CS 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY       TCGA-BR-A4IZ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4J1       TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4J8       TCGA-BR-A4PD       TCGA-BR-A4QI       TCGA-BR-A4QL 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799       TCGA-CD-5800 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803       TCGA-CD-5804 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525       TCGA-CD-8526 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-8527       TCGA-CD-8529       TCGA-CD-8530       TCGA-CD-8531 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-8532       TCGA-CD-8533       TCGA-CD-8534       TCGA-CD-8535 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-8536       TCGA-CD-A486       TCGA-CD-A487       TCGA-CD-A489 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CD-A48C       TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-4437       TCGA-CG-4441       TCGA-CG-4449       TCGA-CG-5716 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5717       TCGA-CG-5718       TCGA-CG-5719       TCGA-CG-5720 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5721       TCGA-CG-5722       TCGA-CG-5723       TCGA-CG-5724 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727       TCGA-CG-5728 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733       TCGA-CG-5734 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579       TCGA-D7-6518 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521       TCGA-D7-6522 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6526       TCGA-D7-6527 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8576       TCGA-D7-8578 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-8579       TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6ET       TCGA-D7-A6EV 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A6EX       TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A6F2       TCGA-D7-A747       TCGA-D7-A748       TCGA-D7-A74A 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-D7-A74B       TCGA-EQ-5647       TCGA-EQ-8122       TCGA-F1-6177 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-F1-6874       TCGA-F1-6875       TCGA-F1-A448       TCGA-FP-7735 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-FP-7829       TCGA-FP-7998       TCGA-FP-8099       TCGA-FP-8209 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-FP-8210       TCGA-FP-8211       TCGA-FP-8631       TCGA-FP-A4BE 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-FP-A9TM       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7134 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HF-7136       TCGA-HU-8238       TCGA-HU-8243       TCGA-HU-8602 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-8604       TCGA-HU-8608       TCGA-HU-A4G3       TCGA-HU-A4G8 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4GC       TCGA-HU-A4GD       TCGA-HU-A4GF       TCGA-HU-A4GH 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4GJ       TCGA-HU-A4GN       TCGA-HU-A4GQ       TCGA-HU-A4GT 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4GX       TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H4 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4H6       TCGA-HU-A4H8       TCGA-HU-A4HB 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IC-A6RE       TCGA-IC-A6RF       TCGA-IG-A3I8       TCGA-IG-A3QL 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A3Y9       TCGA-IG-A3YA       TCGA-IG-A3YB       TCGA-IG-A3YC 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A4P3       TCGA-IG-A4QS       TCGA-IG-A4QT       TCGA-IG-A50L 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A51D       TCGA-IG-A5B8       TCGA-IG-A5S3       TCGA-IG-A625 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A6QS       TCGA-IG-A7DP       TCGA-IG-A8O2       TCGA-IG-A97H 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808       TCGA-IN-8462 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RJ       TCGA-IN-A6RL 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RP       TCGA-IN-A7NR       TCGA-IN-A7NT 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-IN-A7NU       TCGA-IN-AB1V       TCGA-IN-AB1X       TCGA-IP-7968 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-JY-A6F8       TCGA-JY-A6FA       TCGA-JY-A6FB       TCGA-JY-A6FD 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-JY-A6FE       TCGA-JY-A6FG       TCGA-JY-A6FH       TCGA-JY-A938 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93C       TCGA-JY-A93D       TCGA-JY-A93E 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-KB-A6F5       TCGA-KB-A6F7       TCGA-KB-A93J       TCGA-KH-A6WC 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H       TCGA-L5-A43I 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE       TCGA-L5-A4OF 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OM       TCGA-L5-A4ON 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OO       TCGA-L5-A4OP       TCGA-L5-A4OQ       TCGA-L5-A4OR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU       TCGA-L5-A4OW 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A4OX       TCGA-L5-A88S       TCGA-L5-A88T       TCGA-L5-A88V 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A88W       TCGA-L5-A88Y       TCGA-L5-A88Z       TCGA-L5-A891 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A893       TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NG 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NH       TCGA-L5-A8NI       TCGA-L5-A8NJ       TCGA-L5-A8NK 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NL       TCGA-L5-A8NM       TCGA-L5-A8NN       TCGA-L5-A8NQ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NR       TCGA-L5-A8NS       TCGA-L5-A8NT       TCGA-L5-A8NU 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G       TCGA-L7-A6VZ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M       TCGA-LN-A49N 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R       TCGA-LN-A49S 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A49U       TCGA-LN-A49W       TCGA-LN-A49X       TCGA-LN-A49Y 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A4A1       TCGA-LN-A4A2       TCGA-LN-A4A4       TCGA-LN-A4A5 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A4A6       TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A4MR       TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A7HV       TCGA-LN-A7HW       TCGA-LN-A7HX       TCGA-LN-A7HY 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A7HZ       TCGA-LN-A8HZ       TCGA-LN-A8I0       TCGA-LN-A8I1 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-LN-A9FO       TCGA-LN-A9FP       TCGA-LN-A9FQ       TCGA-LN-A9FR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-M9-A5M8       TCGA-MX-A5UG       TCGA-MX-A5UJ       TCGA-MX-A663 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-MX-A666       TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-R5-A7O7 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R5-A7ZE       TCGA-R5-A7ZF       TCGA-R5-A7ZI       TCGA-R5-A7ZR 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R5-A804       TCGA-R5-A805       TCGA-R6-A6DN       TCGA-R6-A6DQ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R6-A6KZ       TCGA-R6-A6L4       TCGA-R6-A6L6       TCGA-R6-A6XG 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R6-A6XQ       TCGA-R6-A6Y0       TCGA-R6-A6Y2       TCGA-R6-A8W5 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-R6-A8W8       TCGA-R6-A8WG       TCGA-RD-A7BS       TCGA-RD-A7BW 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW       TCGA-RD-A8N0 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-RD-A8N1       TCGA-RD-A8N5       TCGA-RD-A8N6       TCGA-RD-A8N9 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-RE-A7BO       TCGA-S8-A6BV       TCGA-S8-A6BW       TCGA-SW-A7EA 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-SW-A7EB       TCGA-V5-A7RB       TCGA-V5-A7RC       TCGA-V5-A7RE 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-V5-AASW       TCGA-V5-AASX       TCGA-VQ-A8DL       TCGA-VQ-A8DU 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A8DV       TCGA-VQ-A8E2       TCGA-VQ-A8E7       TCGA-VQ-A8P2 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK       TCGA-VQ-A8PM 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A8PQ       TCGA-VQ-A91Q       TCGA-VQ-A91U       TCGA-VQ-A91V 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-A94T       TCGA-VQ-AA64       TCGA-VQ-AA68 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-AA69       TCGA-VQ-AA6A       TCGA-VQ-AA6B       TCGA-VQ-AA6F 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VQ-AA6G       TCGA-VQ-AA6I       TCGA-VQ-AA6J       TCGA-VQ-AA6K 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ       TCGA-VR-A8ER 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-A8ET       TCGA-VR-A8EU       TCGA-VR-A8EW       TCGA-VR-A8EX 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-A8EY       TCGA-VR-A8EZ       TCGA-VR-A8Q7       TCGA-VR-AA4D 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-VR-AA4G       TCGA-VR-AA7B       TCGA-VR-AA7D       TCGA-VR-AA7I 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-X8-AAAR       TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-XP-A8T8 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-Z6-A8JD       TCGA-Z6-A8JE       TCGA-Z6-A9VB       TCGA-Z6-AAPN 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 
      TCGA-ZA-A8F6       TCGA-ZR-A9CJ 
"BCL2L2 WILD-TYPE" "BCL2L2 WILD-TYPE" 

Clustering(1193) Variable = SPTLC3 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTLC3 MUTATED        3      3      2      7
  SPTLC3 WILD-TYPE    132     89    170    169
D1193V1, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              3               89
  CLUS_3              2              170
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTLC3 MUTATED        7      3      3
  SPTLC3 WILD-TYPE    208    152    159
D1193V2, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              3              152
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SPTLC3 MUTATED        2      7      1      3
  SPTLC3 WILD-TYPE    133    117    124     57
D1193V3, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTLC3 MUTATED        7      6      0
  SPTLC3 WILD-TYPE    246     96     89
D1193V4, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              6               96
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTLC3 MUTATED        2      8      3
  SPTLC3 WILD-TYPE    162    239    140
D1193V5, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              8              239
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTLC3 MUTATED        6      2      0      1      4
  SPTLC3 WILD-TYPE    115    102     91    120    113
D1193V6, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              2              102
  CLUS_3              0               91
  CLUS_4              1              120
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SPTLC3 MUTATED        3      8      4
  SPTLC3 WILD-TYPE    156    243    161
D1193V7, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              8              243
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTLC3 MUTATED        7      1      5      0      2
  SPTLC3 WILD-TYPE    111    130    146     94     79
D1193V8, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              7              111
  CLUS_2              1              130
  CLUS_3              5              146
  CLUS_4              0               94
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTLC3 MUTATED        1      3      0      1      5
  SPTLC3 WILD-TYPE    117    133    115     39     66
D1193V9, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SPTLC3 MUTATED        3      2      2      3      0
  SPTLC3 WILD-TYPE     45    107    128     98     92
D1193V10, multiclass
        clus
vv       SPTLC3 MUTATED SPTLC3 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              2              107
  CLUS_3              2              128
  CLUS_4              3               98
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1194) Variable = PPRC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPRC1 MUTATED        4      4      4      8
  PPRC1 WILD-TYPE    131     88    168    168
D1194V1, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4              88
  CLUS_3             4             168
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPRC1 MUTATED       14      4      1
  PPRC1 WILD-TYPE    201    151    161
D1194V2, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1            14             201
  CLUS_2             4             151
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPRC1 MUTATED        7      8      1      1
  PPRC1 WILD-TYPE    128    116    124     59
D1194V3, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             8             116
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPRC1 MUTATED        9      6      2
  PPRC1 WILD-TYPE    244     96     87
D1194V4, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             6              96
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPRC1 MUTATED        7      9      3
  PPRC1 WILD-TYPE    157    238    140
D1194V5, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             7             157
  CLUS_2             9             238
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPRC1 MUTATED        4      4      6      2      3
  PPRC1 WILD-TYPE    117    100     85    119    114
D1194V6, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPRC1 MUTATED        6     13      1
  PPRC1 WILD-TYPE    153    238    164
D1194V7, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             6             153
  CLUS_2            13             238
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPRC1 MUTATED        3      7      7      3      0
  PPRC1 WILD-TYPE    115    124    144     91     81
D1194V8, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             7             124
  CLUS_3             7             144
  CLUS_4             3              91
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPRC1 MUTATED        4      4      2      4      4
  PPRC1 WILD-TYPE    114    132    113     36     67
D1194V9, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             4              36
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPRC1 MUTATED        2      5      7      1      3
  PPRC1 WILD-TYPE     46    104    123    100     89
D1194V10, multiclass
        clus
vv       PPRC1 MUTATED PPRC1 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             7             123
  CLUS_4             1             100
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1195) Variable = KCNT2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNT2 MUTATED       15      9     10      7
  KCNT2 WILD-TYPE    120     83    162    169
D1195V1, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1            15             120
  CLUS_2             9              83
  CLUS_3            10             162
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNT2 MUTATED       22      8      6
  KCNT2 WILD-TYPE    193    147    156
D1195V2, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1            22             193
  CLUS_2             8             147
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KCNT2 MUTATED       14      8      3      5
  KCNT2 WILD-TYPE    121    116    122     55
D1195V3, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1            14             121
  CLUS_2             8             116
  CLUS_3             3             122
  CLUS_4             5              55
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNT2 MUTATED       19      8      3
  KCNT2 WILD-TYPE    234     94     86
D1195V4, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1            19             234
  CLUS_2             8              94
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNT2 MUTATED        6     25      6
  KCNT2 WILD-TYPE    158    222    137
D1195V5, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1             6             158
  CLUS_2            25             222
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNT2 MUTATED        9     10     10      4      4
  KCNT2 WILD-TYPE    112     94     81    117    113
D1195V6, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1             9             112
  CLUS_2            10              94
  CLUS_3            10              81
  CLUS_4             4             117
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  KCNT2 MUTATED        9     25      7
  KCNT2 WILD-TYPE    150    226    158
D1195V7, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1             9             150
  CLUS_2            25             226
  CLUS_3             7             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNT2 MUTATED       12     16      6      3      4
  KCNT2 WILD-TYPE    106    115    145     91     77
D1195V8, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1            12             106
  CLUS_2            16             115
  CLUS_3             6             145
  CLUS_4             3              91
  CLUS_5             4              77
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNT2 MUTATED        8     13      6      2      5
  KCNT2 WILD-TYPE    110    123    109     38     66
D1195V9, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1             8             110
  CLUS_2            13             123
  CLUS_3             6             109
  CLUS_4             2              38
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KCNT2 MUTATED        6     12     10      3      3
  KCNT2 WILD-TYPE     42     97    120     98     89
D1195V10, multiclass
        clus
vv       KCNT2 MUTATED KCNT2 WILD-TYPE
  CLUS_1             6              42
  CLUS_2            12              97
  CLUS_3            10             120
  CLUS_4             3              98
  CLUS_5             3              89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1196) Variable = CLSTN1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLSTN1 MUTATED        0      3      3      7
  CLSTN1 WILD-TYPE    135     89    169    169
D1196V1, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              3               89
  CLUS_3              3              169
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CLSTN1 MUTATED        6      4      3
  CLSTN1 WILD-TYPE    209    151    159
D1196V2, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              4              151
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CLSTN1 MUTATED        3      7      1      0
  CLSTN1 WILD-TYPE    132    117    124     60
D1196V3, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CLSTN1 MUTATED        7      2      2
  CLSTN1 WILD-TYPE    246    100     87
D1196V4, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CLSTN1 MUTATED        4      5      4
  CLSTN1 WILD-TYPE    160    242    139
D1196V5, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLSTN1 MUTATED        1      2      4      3      3
  CLSTN1 WILD-TYPE    120    102     87    118    114
D1196V6, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              3              118
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CLSTN1 MUTATED        6      7      1
  CLSTN1 WILD-TYPE    153    244    164
D1196V7, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              6              153
  CLUS_2              7              244
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLSTN1 MUTATED        2      4      5      3      0
  CLSTN1 WILD-TYPE    116    127    146     91     81
D1196V8, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              127
  CLUS_3              5              146
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLSTN1 MUTATED        3      5      0      1      4
  CLSTN1 WILD-TYPE    115    131    115     39     67
D1196V9, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              131
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CLSTN1 MUTATED        1      4      5      0      3
  CLSTN1 WILD-TYPE     47    105    125    101     89
D1196V10, multiclass
        clus
vv       CLSTN1 MUTATED CLSTN1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              4              105
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1197) Variable = PCDH19 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCDH19 MUTATED        1      4      1     24
  PCDH19 WILD-TYPE    134     88    171    152
D1197V1, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              4               88
  CLUS_3              1              171
  CLUS_4             24              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH19 MUTATED       18      2      4
  PCDH19 WILD-TYPE    197    153    158
D1197V2, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1             18              197
  CLUS_2              2              153
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PCDH19 MUTATED       10     10      6      1
  PCDH19 WILD-TYPE    125    114    119     59
D1197V3, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1             10              125
  CLUS_2             10              114
  CLUS_3              6              119
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH19 MUTATED       15      8      4
  PCDH19 WILD-TYPE    238     94     85
D1197V4, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1             15              238
  CLUS_2              8               94
  CLUS_3              4               85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH19 MUTATED        5     17      8
  PCDH19 WILD-TYPE    159    230    135
D1197V5, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              5              159
  CLUS_2             17              230
  CLUS_3              8              135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH19 MUTATED        3      7     11      3      6
  PCDH19 WILD-TYPE    118     97     80    118    111
D1197V6, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              3              118
  CLUS_2              7               97
  CLUS_3             11               80
  CLUS_4              3              118
  CLUS_5              6              111
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PCDH19 MUTATED        3     22      5
  PCDH19 WILD-TYPE    156    229    160
D1197V7, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             22              229
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH19 MUTATED        2     12     11      2      3
  PCDH19 WILD-TYPE    116    119    140     92     78
D1197V8, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              2              116
  CLUS_2             12              119
  CLUS_3             11              140
  CLUS_4              2               92
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH19 MUTATED        2      6      4      4      6
  PCDH19 WILD-TYPE    116    130    111     36     65
D1197V9, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              4              111
  CLUS_4              4               36
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PCDH19 MUTATED        2      4      9      5      2
  PCDH19 WILD-TYPE     46    105    121     96     90
D1197V10, multiclass
        clus
vv       PCDH19 MUTATED PCDH19 WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              9              121
  CLUS_4              5               96
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1198) Variable = LRRC4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRRC4 MUTATED        1      3      6     12
  LRRC4 WILD-TYPE    134     89    166    164
D1198V1, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             6             166
  CLUS_4            12             164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRC4 MUTATED       12      1      5
  LRRC4 WILD-TYPE    203    154    157
D1198V2, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             1             154
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  LRRC4 MUTATED        5     10      4      1
  LRRC4 WILD-TYPE    130    114    121     59
D1198V3, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             5             130
  CLUS_2            10             114
  CLUS_3             4             121
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRC4 MUTATED       13      4      3
  LRRC4 WILD-TYPE    240     98     86
D1198V4, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             4              98
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRC4 MUTATED        2     12      6
  LRRC4 WILD-TYPE    162    235    137
D1198V5, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            12             235
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRC4 MUTATED        3      3     10      1      3
  LRRC4 WILD-TYPE    118    101     81    120    114
D1198V6, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             3             101
  CLUS_3            10              81
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  LRRC4 MUTATED        3     15      4
  LRRC4 WILD-TYPE    156    236    161
D1198V7, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            15             236
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRC4 MUTATED        4      9      7      1      1
  LRRC4 WILD-TYPE    114    122    144     93     80
D1198V8, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             9             122
  CLUS_3             7             144
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRC4 MUTATED        3      2      2      1      5
  LRRC4 WILD-TYPE    115    134    113     39     66
D1198V9, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             5              66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  LRRC4 MUTATED        0      4      4      4      1
  LRRC4 WILD-TYPE     48    105    126     97     91
D1198V10, multiclass
        clus
vv       LRRC4 MUTATED LRRC4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1199) Variable = THYN1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THYN1 MUTATED        3      2      0      5
  THYN1 WILD-TYPE    132     90    172    171
D1199V1, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2              90
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THYN1 MUTATED        6      1      1
  THYN1 WILD-TYPE    209    154    161
D1199V2, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  THYN1 MUTATED        2      2      0      4
  THYN1 WILD-TYPE    133    122    125     56
D1199V3, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THYN1 MUTATED        4      3      1
  THYN1 WILD-TYPE    249     99     88
D1199V4, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THYN1 MUTATED        3      7      0
  THYN1 WILD-TYPE    161    240    143
D1199V5, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THYN1 MUTATED        4      1      3      2      0
  THYN1 WILD-TYPE    117    103     88    119    117
D1199V6, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  THYN1 MUTATED        3      6      1
  THYN1 WILD-TYPE    156    245    164
D1199V7, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THYN1 MUTATED        2      4      3      1      0
  THYN1 WILD-TYPE    116    127    148     93     81
D1199V8, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THYN1 MUTATED        2      2      0      1      2
  THYN1 WILD-TYPE    116    134    115     39     69
D1199V9, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  THYN1 MUTATED        1      1      4      0      1
  THYN1 WILD-TYPE     47    108    126    101     91
D1199V10, multiclass
        clus
vv       THYN1 MUTATED THYN1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1200) Variable = BZW1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BZW1 MUTATED        2      0      1      6
  BZW1 WILD-TYPE    133     92    171    170
D1200V1, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            1            171
  CLUS_4            6            170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BZW1 MUTATED        7      1      0
  BZW1 WILD-TYPE    208    154    162
D1200V2, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            7            208
  CLUS_2            1            154
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BZW1 MUTATED        2      1      1      0
  BZW1 WILD-TYPE    133    123    124     60
D1200V3, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            1            123
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BZW1 MUTATED        3      0      1
  BZW1 WILD-TYPE    250    102     88
D1200V4, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            0            102
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BZW1 MUTATED        1      8      0
  BZW1 WILD-TYPE    163    239    143
D1200V5, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            8            239
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BZW1 MUTATED        0      5      3      1      0
  BZW1 WILD-TYPE    121     99     88    120    117
D1200V6, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            5             99
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  BZW1 MUTATED        1      8      0
  BZW1 WILD-TYPE    158    243    165
D1200V7, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            8            243
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BZW1 MUTATED        0      7      1      1      0
  BZW1 WILD-TYPE    118    124    150     93     81
D1200V8, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            7            124
  CLUS_3            1            150
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BZW1 MUTATED        1      6      0      0      1
  BZW1 WILD-TYPE    117    130    115     40     70
D1200V9, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            130
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BZW1 MUTATED        0      6      1      0      1
  BZW1 WILD-TYPE     48    103    129    101     91
D1200V10, multiclass
        clus
vv       BZW1 MUTATED BZW1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            6            103
  CLUS_3            1            129
  CLUS_4            0            101
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1201) Variable = CEP110 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP110 MUTATED        1      1      3     14
  CEP110 WILD-TYPE    134     91    169    162
D1201V1, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              3              169
  CLUS_4             14              162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP110 MUTATED       13      1      4
  CEP110 WILD-TYPE    202    154    158
D1201V2, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1             13              202
  CLUS_2              1              154
  CLUS_3              4              158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CEP110 MUTATED        6      7      1      3
  CEP110 WILD-TYPE    129    117    124     57
D1201V3, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP110 MUTATED       13      2      2
  CEP110 WILD-TYPE    240    100     87
D1201V4, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1             13              240
  CLUS_2              2              100
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP110 MUTATED        4     11      3
  CEP110 WILD-TYPE    160    236    140
D1201V5, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              4              160
  CLUS_2             11              236
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP110 MUTATED        1      5      7      2      3
  CEP110 WILD-TYPE    120     99     84    119    114
D1201V6, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              5               99
  CLUS_3              7               84
  CLUS_4              2              119
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CEP110 MUTATED        3     14      2
  CEP110 WILD-TYPE    156    237    163
D1201V7, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              3              156
  CLUS_2             14              237
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP110 MUTATED        2      8      5      2      2
  CEP110 WILD-TYPE    116    123    146     92     79
D1201V8, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              2              116
  CLUS_2              8              123
  CLUS_3              5              146
  CLUS_4              2               92
  CLUS_5              2               79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP110 MUTATED        1      6      2      3      4
  CEP110 WILD-TYPE    117    130    113     37     67
D1201V9, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              3               37
  CLUS_5              4               67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CEP110 MUTATED        1      5      6      2      2
  CEP110 WILD-TYPE     47    104    124     99     90
D1201V10, multiclass
        clus
vv       CEP110 MUTATED CEP110 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              5              104
  CLUS_3              6              124
  CLUS_4              2               99
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1202) Variable = UACA MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UACA MUTATED        2      0      4     11
  UACA WILD-TYPE    133     92    168    165
D1202V1, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            2            133
  CLUS_2            0             92
  CLUS_3            4            168
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UACA MUTATED        9      2      2
  UACA WILD-TYPE    206    153    160
D1202V2, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            9            206
  CLUS_2            2            153
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UACA MUTATED        6      8      1      0
  UACA WILD-TYPE    129    116    124     60
D1202V3, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            6            129
  CLUS_2            8            116
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UACA MUTATED       10      4      1
  UACA WILD-TYPE    243     98     88
D1202V4, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1           10            243
  CLUS_2            4             98
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UACA MUTATED        3     10      4
  UACA WILD-TYPE    161    237    139
D1202V5, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            3            161
  CLUS_2           10            237
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UACA MUTATED        0      3     11      2      1
  UACA WILD-TYPE    121    101     80    119    116
D1202V6, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3           11             80
  CLUS_4            2            119
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  UACA MUTATED        2     14      1
  UACA WILD-TYPE    157    237    164
D1202V7, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            2            157
  CLUS_2           14            237
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UACA MUTATED        1      9      4      2      1
  UACA WILD-TYPE    117    122    147     92     80
D1202V8, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            1            117
  CLUS_2            9            122
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UACA MUTATED        2      4      0      3      3
  UACA WILD-TYPE    116    132    115     37     68
D1202V9, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            2            116
  CLUS_2            4            132
  CLUS_3            0            115
  CLUS_4            3             37
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UACA MUTATED        1      5      3      1      2
  UACA WILD-TYPE     47    104    127    100     90
D1202V10, multiclass
        clus
vv       UACA MUTATED UACA WILD-TYPE
  CLUS_1            1             47
  CLUS_2            5            104
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1203) Variable = PAPOLB MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAPOLB MUTATED        2      1      1     11
  PAPOLB WILD-TYPE    133     91    171    165
D1203V1, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAPOLB MUTATED        6      3      5
  PAPOLB WILD-TYPE    209    152    157
D1203V2, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              6              209
  CLUS_2              3              152
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PAPOLB MUTATED        2      4      2      2
  PAPOLB WILD-TYPE    133    120    123     58
D1203V3, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4              120
  CLUS_3              2              123
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAPOLB MUTATED        5      3      2
  PAPOLB WILD-TYPE    248     99     87
D1203V4, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              5              248
  CLUS_2              3               99
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAPOLB MUTATED        2      9      4
  PAPOLB WILD-TYPE    162    238    139
D1203V5, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2              162
  CLUS_2              9              238
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPOLB MUTATED        3      4      2      2      4
  PAPOLB WILD-TYPE    118    100     89    119    113
D1203V6, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              3              118
  CLUS_2              4              100
  CLUS_3              2               89
  CLUS_4              2              119
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  PAPOLB MUTATED        2      9      4
  PAPOLB WILD-TYPE    157    242    161
D1203V7, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2              157
  CLUS_2              9              242
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPOLB MUTATED        2      2      7      1      3
  PAPOLB WILD-TYPE    116    129    144     93     78
D1203V8, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2              116
  CLUS_2              2              129
  CLUS_3              7              144
  CLUS_4              1               93
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPOLB MUTATED        2      4      3      0      5
  PAPOLB WILD-TYPE    116    132    112     40     66
D1203V9, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              132
  CLUS_3              3              112
  CLUS_4              0               40
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PAPOLB MUTATED        2      1      8      2      1
  PAPOLB WILD-TYPE     46    108    122     99     91
D1203V10, multiclass
        clus
vv       PAPOLB MUTATED PAPOLB WILD-TYPE
  CLUS_1              2               46
  CLUS_2              1              108
  CLUS_3              8              122
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1204) Variable = TBC1D22B MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBC1D22B MUTATED        1      1      1      6
  TBC1D22B WILD-TYPE    134     91    171    170
D1204V1, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                1                134
  CLUS_2                1                 91
  CLUS_3                1                171
  CLUS_4                6                170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D22B MUTATED        7      0      1
  TBC1D22B WILD-TYPE    208    155    161
D1204V2, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                7                208
  CLUS_2                0                155
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TBC1D22B MUTATED        5      1      1      0
  TBC1D22B WILD-TYPE    130    123    124     60
D1204V3, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                5                130
  CLUS_2                1                123
  CLUS_3                1                124
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D22B MUTATED        6      0      1
  TBC1D22B WILD-TYPE    247    102     88
D1204V4, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                6                247
  CLUS_2                0                102
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D22B MUTATED        2      4      3
  TBC1D22B WILD-TYPE    162    243    140
D1204V5, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                2                162
  CLUS_2                4                243
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D22B MUTATED        1      0      5      1      2
  TBC1D22B WILD-TYPE    120    104     86    120    115
D1204V6, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                1                120
  CLUS_2                0                104
  CLUS_3                5                 86
  CLUS_4                1                120
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  TBC1D22B MUTATED        2      5      2
  TBC1D22B WILD-TYPE    157    246    163
D1204V7, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                2                157
  CLUS_2                5                246
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D22B MUTATED        0      6      1      0      2
  TBC1D22B WILD-TYPE    118    125    150     94     79
D1204V8, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                125
  CLUS_3                1                150
  CLUS_4                0                 94
  CLUS_5                2                 79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D22B MUTATED        0      4      2      1      0
  TBC1D22B WILD-TYPE    118    132    113     39     71
D1204V9, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                0                118
  CLUS_2                4                132
  CLUS_3                2                113
  CLUS_4                1                 39
  CLUS_5                0                 71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TBC1D22B MUTATED        0      5      1      1      0
  TBC1D22B WILD-TYPE     48    104    129    100     92
D1204V10, multiclass
        clus
vv       TBC1D22B MUTATED TBC1D22B WILD-TYPE
  CLUS_1                0                 48
  CLUS_2                5                104
  CLUS_3                1                129
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1205) Variable = HTR1E MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTR1E MUTATED        2      3      3      9
  HTR1E WILD-TYPE    133     89    169    167
D1205V1, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1E MUTATED       10      5      1
  HTR1E WILD-TYPE    205    150    161
D1205V2, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1            10             205
  CLUS_2             5             150
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  HTR1E MUTATED        6      5      2      2
  HTR1E WILD-TYPE    129    119    123     58
D1205V3, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             6             129
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1E MUTATED       11      3      1
  HTR1E WILD-TYPE    242     99     88
D1205V4, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1            11             242
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1E MUTATED        5      9      0
  HTR1E WILD-TYPE    159    238    143
D1205V5, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             5             159
  CLUS_2             9             238
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1E MUTATED        5      5      2      2      0
  HTR1E WILD-TYPE    116     99     89    119    117
D1205V6, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             5             116
  CLUS_2             5              99
  CLUS_3             2              89
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  HTR1E MUTATED        5     11      1
  HTR1E WILD-TYPE    154    240    164
D1205V7, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             5             154
  CLUS_2            11             240
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1E MUTATED        2      6      7      2      0
  HTR1E WILD-TYPE    116    125    144     92     81
D1205V8, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             125
  CLUS_3             7             144
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1E MUTATED        5      6      1      2      2
  HTR1E WILD-TYPE    113    130    114     38     69
D1205V9, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             5             113
  CLUS_2             6             130
  CLUS_3             1             114
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  HTR1E MUTATED        2      5      6      1      2
  HTR1E WILD-TYPE     46    104    124    100     90
D1205V10, multiclass
        clus
vv       HTR1E MUTATED HTR1E WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             6             124
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1206) Variable = SALL2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SALL2 MUTATED        1      3      4      8
  SALL2 WILD-TYPE    134     89    168    168
D1206V1, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             4             168
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SALL2 MUTATED       12      2      2
  SALL2 WILD-TYPE    203    153    160
D1206V2, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SALL2 MUTATED       10      3      1      0
  SALL2 WILD-TYPE    125    121    124     60
D1206V3, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SALL2 MUTATED       13      0      1
  SALL2 WILD-TYPE    240    102     88
D1206V4, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1            13             240
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SALL2 MUTATED        1     12      3
  SALL2 WILD-TYPE    163    235    140
D1206V5, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             1             163
  CLUS_2            12             235
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SALL2 MUTATED        3      4      6      1      2
  SALL2 WILD-TYPE    118    100     85    120    115
D1206V6, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             4             100
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SALL2 MUTATED        2     11      3
  SALL2 WILD-TYPE    157    240    162
D1206V7, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             2             157
  CLUS_2            11             240
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SALL2 MUTATED        4      7      2      1      2
  SALL2 WILD-TYPE    114    124    149     93     79
D1206V8, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             124
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SALL2 MUTATED        2      6      4      1      2
  SALL2 WILD-TYPE    116    130    111     39     69
D1206V9, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             6             130
  CLUS_3             4             111
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SALL2 MUTATED        2      5      4      3      1
  SALL2 WILD-TYPE     46    104    126     98     91
D1206V10, multiclass
        clus
vv       SALL2 MUTATED SALL2 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             5             104
  CLUS_3             4             126
  CLUS_4             3              98
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1207) Variable = BTAF1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTAF1 MUTATED        2      3      3     17
  BTAF1 WILD-TYPE    133     89    169    159
D1207V1, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTAF1 MUTATED       13      4      5
  BTAF1 WILD-TYPE    202    151    157
D1207V2, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             4             151
  CLUS_3             5             157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  BTAF1 MUTATED        7      7      2      2
  BTAF1 WILD-TYPE    128    117    123     58
D1207V3, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             7             117
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTAF1 MUTATED       14      3      1
  BTAF1 WILD-TYPE    239     99     88
D1207V4, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1            14             239
  CLUS_2             3              99
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTAF1 MUTATED        4     16      4
  BTAF1 WILD-TYPE    160    231    139
D1207V5, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             4             160
  CLUS_2            16             231
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTAF1 MUTATED        4      5      9      3      3
  BTAF1 WILD-TYPE    117     99     82    118    114
D1207V6, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             9              82
  CLUS_4             3             118
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  BTAF1 MUTATED        5     18      2
  BTAF1 WILD-TYPE    154    233    163
D1207V7, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             5             154
  CLUS_2            18             233
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTAF1 MUTATED        4      7     11      2      1
  BTAF1 WILD-TYPE    114    124    140     92     80
D1207V8, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             124
  CLUS_3            11             140
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTAF1 MUTATED        3      8      0      1      7
  BTAF1 WILD-TYPE    115    128    115     39     64
D1207V9, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             8             128
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             7              64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  BTAF1 MUTATED        1      7      9      0      2
  BTAF1 WILD-TYPE     47    102    121    101     90
D1207V10, multiclass
        clus
vv       BTAF1 MUTATED BTAF1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             7             102
  CLUS_3             9             121
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1208) Variable = ARV1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARV1 MUTATED        1      1      0      5
  ARV1 WILD-TYPE    134     91    172    171
D1208V1, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARV1 MUTATED        5      1      1
  ARV1 WILD-TYPE    210    154    161
D1208V2, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARV1 MUTATED        3      2      0      0
  ARV1 WILD-TYPE    132    122    125     60
D1208V3, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARV1 MUTATED        5      0      0
  ARV1 WILD-TYPE    248    102     89
D1208V4, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            0            102
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARV1 MUTATED        1      6      0
  ARV1 WILD-TYPE    163    241    143
D1208V5, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            6            241
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARV1 MUTATED        0      4      2      1      0
  ARV1 WILD-TYPE    121    100     89    120    117
D1208V6, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            4            100
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  ARV1 MUTATED        1      4      2
  ARV1 WILD-TYPE    158    247    163
D1208V7, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            4            247
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARV1 MUTATED        1      2      3      1      0
  ARV1 WILD-TYPE    117    129    148     93     81
D1208V8, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            129
  CLUS_3            3            148
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARV1 MUTATED        1      1      2      0      2
  ARV1 WILD-TYPE    117    135    113     40     69
D1208V9, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARV1 MUTATED        0      1      2      2      1
  ARV1 WILD-TYPE     48    108    128     99     91
D1208V10, multiclass
        clus
vv       ARV1 MUTATED ARV1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            2            128
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1209) Variable = DOPEY2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOPEY2 MUTATED        2      2      7     22
  DOPEY2 WILD-TYPE    133     90    165    154
D1209V1, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              7              165
  CLUS_4             22              154
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DOPEY2 MUTATED       20      5      5
  DOPEY2 WILD-TYPE    195    150    157
D1209V2, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1             20              195
  CLUS_2              5              150
  CLUS_3              5              157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  DOPEY2 MUTATED       11     10      4      3
  DOPEY2 WILD-TYPE    124    114    121     57
D1209V3, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1             11              124
  CLUS_2             10              114
  CLUS_3              4              121
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DOPEY2 MUTATED       17      8      3
  DOPEY2 WILD-TYPE    236     94     86
D1209V4, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1             17              236
  CLUS_2              8               94
  CLUS_3              3               86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DOPEY2 MUTATED        7     20      6
  DOPEY2 WILD-TYPE    157    227    137
D1209V5, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              7              157
  CLUS_2             20              227
  CLUS_3              6              137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOPEY2 MUTATED        6      7     12      3      5
  DOPEY2 WILD-TYPE    115     97     79    118    112
D1209V6, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              6              115
  CLUS_2              7               97
  CLUS_3             12               79
  CLUS_4              3              118
  CLUS_5              5              112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  DOPEY2 MUTATED        7     24      4
  DOPEY2 WILD-TYPE    152    227    161
D1209V7, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              7              152
  CLUS_2             24              227
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOPEY2 MUTATED        5     15     12      2      1
  DOPEY2 WILD-TYPE    113    116    139     92     80
D1209V8, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              5              113
  CLUS_2             15              116
  CLUS_3             12              139
  CLUS_4              2               92
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOPEY2 MUTATED        4     13      3      2      6
  DOPEY2 WILD-TYPE    114    123    112     38     65
D1209V9, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              4              114
  CLUS_2             13              123
  CLUS_3              3              112
  CLUS_4              2               38
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  DOPEY2 MUTATED        3      9     10      4      2
  DOPEY2 WILD-TYPE     45    100    120     97     90
D1209V10, multiclass
        clus
vv       DOPEY2 MUTATED DOPEY2 WILD-TYPE
  CLUS_1              3               45
  CLUS_2              9              100
  CLUS_3             10              120
  CLUS_4              4               97
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1210) Variable = ZNF800 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF800 MUTATED        2      1      0     11
  ZNF800 WILD-TYPE    133     91    172    165
D1210V1, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4             11              165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF800 MUTATED        5      2      2
  ZNF800 WILD-TYPE    210    153    160
D1210V2, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              5              210
  CLUS_2              2              153
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF800 MUTATED        5      4      1      1
  ZNF800 WILD-TYPE    130    120    124     59
D1210V3, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4              120
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF800 MUTATED        7      3      1
  ZNF800 WILD-TYPE    246     99     88
D1210V4, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              7              246
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF800 MUTATED        4      5      4
  ZNF800 WILD-TYPE    160    242    139
D1210V5, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              4              160
  CLUS_2              5              242
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF800 MUTATED        2      4      3      1      3
  ZNF800 WILD-TYPE    119    100     88    120    114
D1210V6, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              4              100
  CLUS_3              3               88
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF800 MUTATED        2      8      4
  ZNF800 WILD-TYPE    157    243    161
D1210V7, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              2              157
  CLUS_2              8              243
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF800 MUTATED        3      4      7      0      0
  ZNF800 WILD-TYPE    115    127    144     94     81
D1210V8, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              127
  CLUS_3              7              144
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF800 MUTATED        1      3      1      1      2
  ZNF800 WILD-TYPE    117    133    114     39     69
D1210V9, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF800 MUTATED        1      3      2      2      0
  ZNF800 WILD-TYPE     47    106    128     99     92
D1210V10, multiclass
        clus
vv       ZNF800 MUTATED ZNF800 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1211) Variable = SRPK3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPK3 MUTATED        1      1      2      9
  SRPK3 WILD-TYPE    134     91    170    167
D1211V1, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             9             167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRPK3 MUTATED        6      2      1
  SRPK3 WILD-TYPE    209    153    161
D1211V2, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             6             209
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRPK3 MUTATED        4      4      2      0
  SRPK3 WILD-TYPE    131    120    123     60
D1211V3, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4             120
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRPK3 MUTATED        6      2      2
  SRPK3 WILD-TYPE    247    100     87
D1211V4, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRPK3 MUTATED        3      7      3
  SRPK3 WILD-TYPE    161    240    140
D1211V5, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             3             161
  CLUS_2             7             240
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRPK3 MUTATED        0      2      6      2      3
  SRPK3 WILD-TYPE    121    102     85    119    114
D1211V6, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             2             119
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRPK3 MUTATED        1      9      3
  SRPK3 WILD-TYPE    158    242    162
D1211V7, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRPK3 MUTATED        0      6      5      1      1
  SRPK3 WILD-TYPE    118    125    146     93     80
D1211V8, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             5             146
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRPK3 MUTATED        1      4      2      1      1
  SRPK3 WILD-TYPE    117    132    113     39     70
D1211V9, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRPK3 MUTATED        1      3      3      1      1
  SRPK3 WILD-TYPE     47    106    127    100     91
D1211V10, multiclass
        clus
vv       SRPK3 MUTATED SRPK3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1212) Variable = CIB3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB3 MUTATED        0      0      0      4
  CIB3 WILD-TYPE    135     92    172    172
D1212V1, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            0             92
  CLUS_3            0            172
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB3 MUTATED        3      0      1
  CIB3 WILD-TYPE    212    155    161
D1212V2, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            0            155
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CIB3 MUTATED        1      3      0      0
  CIB3 WILD-TYPE    134    121    125     60
D1212V3, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3            121
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB3 MUTATED        1      3      0
  CIB3 WILD-TYPE    252     99     89
D1212V4, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            1            252
  CLUS_2            3             99
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB3 MUTATED        1      3      0
  CIB3 WILD-TYPE    163    244    143
D1212V5, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            0            143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIB3 MUTATED        0      1      3      0      0
  CIB3 WILD-TYPE    121    103     88    121    117
D1212V6, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            3             88
  CLUS_4            0            121
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  CIB3 MUTATED        0      5      0
  CIB3 WILD-TYPE    159    246    165
D1212V7, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            0            159
  CLUS_2            5            246
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIB3 MUTATED        0      2      2      0      1
  CIB3 WILD-TYPE    118    129    149     94     80
D1212V8, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            2            129
  CLUS_3            2            149
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIB3 MUTATED        0      1      0      0      3
  CIB3 WILD-TYPE    118    135    115     40     68
D1212V9, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            1            135
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CIB3 MUTATED        0      1      3      0      0
  CIB3 WILD-TYPE     48    108    127    101     92
D1212V10, multiclass
        clus
vv       CIB3 MUTATED CIB3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            1            108
  CLUS_3            3            127
  CLUS_4            0            101
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1213) Variable = PDK3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDK3 MUTATED        1      1      1      5
  PDK3 WILD-TYPE    134     91    171    171
D1213V1, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            5            171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PDK3 MUTATED        3      2      1
  PDK3 WILD-TYPE    212    153    161
D1213V2, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            3            212
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PDK3 MUTATED        4      2      0      0
  PDK3 WILD-TYPE    131    122    125     60
D1213V3, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            2            122
  CLUS_3            0            125
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PDK3 MUTATED        5      1      0
  PDK3 WILD-TYPE    248    101     89
D1213V4, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            5            248
  CLUS_2            1            101
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PDK3 MUTATED        2      4      1
  PDK3 WILD-TYPE    162    243    142
D1213V5, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            4            243
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDK3 MUTATED        1      1      4      1      0
  PDK3 WILD-TYPE    120    103     87    120    117
D1213V6, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            1            103
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PDK3 MUTATED        3      4      1
  PDK3 WILD-TYPE    156    247    164
D1213V7, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            4            247
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDK3 MUTATED        2      3      2      1      0
  PDK3 WILD-TYPE    116    128    149     93     81
D1213V8, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            3            128
  CLUS_3            2            149
  CLUS_4            1             93
  CLUS_5            0             81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDK3 MUTATED        1      2      0      2      0
  PDK3 WILD-TYPE    117    134    115     38     71
D1213V9, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            2            134
  CLUS_3            0            115
  CLUS_4            2             38
  CLUS_5            0             71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PDK3 MUTATED        0      2      0      2      1
  PDK3 WILD-TYPE     48    107    130     99     91
D1213V10, multiclass
        clus
vv       PDK3 MUTATED PDK3 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            0            130
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1214) Variable = NRIP3 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRIP3 MUTATED        0      0      0      7
  NRIP3 WILD-TYPE    135     92    172    169
D1214V1, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NRIP3 MUTATED        4      0      0
  NRIP3 WILD-TYPE    211    155    162
D1214V2, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NRIP3 MUTATED        5      1      0      1
  NRIP3 WILD-TYPE    130    123    125     59
D1214V3, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NRIP3 MUTATED        6      1      0
  NRIP3 WILD-TYPE    247    101     89
D1214V4, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NRIP3 MUTATED        2      3      2
  NRIP3 WILD-TYPE    162    244    141
D1214V5, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             3             244
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRIP3 MUTATED        0      2      3      0      2
  NRIP3 WILD-TYPE    121    102     88    121    115
D1214V6, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NRIP3 MUTATED        0      6      1
  NRIP3 WILD-TYPE    159    245    164
D1214V7, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRIP3 MUTATED        0      3      4      0      0
  NRIP3 WILD-TYPE    118    128    147     94     81
D1214V8, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRIP3 MUTATED        0      0      0      1      3
  NRIP3 WILD-TYPE    118    136    115     39     68
D1214V9, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             0             136
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NRIP3 MUTATED        1      0      3      0      0
  NRIP3 WILD-TYPE     47    109    127    101     92
D1214V10, multiclass
        clus
vv       NRIP3 MUTATED NRIP3 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             0             109
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1215) Variable = ZKSCAN3 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZKSCAN3 MUTATED        3      1      3      6
  ZKSCAN3 WILD-TYPE    132     91    169    170
D1215V1, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN3 MUTATED        7      2      4
  ZKSCAN3 WILD-TYPE    208    153    158
D1215V2, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               2               153
  CLUS_3               4               158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZKSCAN3 MUTATED        2      7      0      0
  ZKSCAN3 WILD-TYPE    133    117    125     60
D1215V3, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               7               117
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN3 MUTATED        6      3      0
  ZKSCAN3 WILD-TYPE    247     99     89
D1215V4, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               3                99
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN3 MUTATED        2      9      2
  ZKSCAN3 WILD-TYPE    162    238    141
D1215V5, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               9               238
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN3 MUTATED        3      4      4      1      1
  ZKSCAN3 WILD-TYPE    118    100     87    120    116
D1215V6, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               3               118
  CLUS_2               4               100
  CLUS_3               4                87
  CLUS_4               1               120
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ZKSCAN3 MUTATED        2      9      2
  ZKSCAN3 WILD-TYPE    157    242    163
D1215V7, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               2               157
  CLUS_2               9               242
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN3 MUTATED        1      8      2      2      0
  ZKSCAN3 WILD-TYPE    117    123    149     92     81
D1215V8, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               8               123
  CLUS_3               2               149
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN3 MUTATED        2      7      1      0      2
  ZKSCAN3 WILD-TYPE    116    129    114     40     69
D1215V9, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               7               129
  CLUS_3               1               114
  CLUS_4               0                40
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZKSCAN3 MUTATED        1      4      5      0      2
  ZKSCAN3 WILD-TYPE     47    105    125    101     90
D1215V10, multiclass
        clus
vv       ZKSCAN3 MUTATED ZKSCAN3 WILD-TYPE
  CLUS_1               1                47
  CLUS_2               4               105
  CLUS_3               5               125
  CLUS_4               0               101
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1216) Variable = ZNF167 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF167 MUTATED        3      1      2      9
  ZNF167 WILD-TYPE    132     91    170    167
D1216V1, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              9              167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF167 MUTATED        8      0      6
  ZNF167 WILD-TYPE    207    155    156
D1216V2, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              0              155
  CLUS_3              6              156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF167 MUTATED        4      5      2      3
  ZNF167 WILD-TYPE    131    119    123     57
D1216V3, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              5              119
  CLUS_3              2              123
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF167 MUTATED        9      5      0
  ZNF167 WILD-TYPE    244     97     89
D1216V4, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              9              244
  CLUS_2              5               97
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF167 MUTATED        1      7      4
  ZNF167 WILD-TYPE    163    240    139
D1216V5, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              7              240
  CLUS_3              4              139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF167 MUTATED        2      3      5      0      2
  ZNF167 WILD-TYPE    119    101     86    121    115
D1216V6, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              5               86
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF167 MUTATED        1      9      5
  ZNF167 WILD-TYPE    158    242    160
D1216V7, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              9              242
  CLUS_3              5              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF167 MUTATED        3      5      6      0      1
  ZNF167 WILD-TYPE    115    126    145     94     80
D1216V8, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              5              126
  CLUS_3              6              145
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF167 MUTATED        0      3      3      1      5
  ZNF167 WILD-TYPE    118    133    112     39     66
D1216V9, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              3              112
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF167 MUTATED        1      3      6      2      0
  ZNF167 WILD-TYPE     47    106    124     99     92
D1216V10, multiclass
        clus
vv       ZNF167 MUTATED ZNF167 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              6              124
  CLUS_4              2               99
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1217) Variable = ABCA5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCA5 MUTATED        2      2      2     17
  ABCA5 WILD-TYPE    133     90    170    159
D1217V1, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2              90
  CLUS_3             2             170
  CLUS_4            17             159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA5 MUTATED       15      1      3
  ABCA5 WILD-TYPE    200    154    159
D1217V2, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1            15             200
  CLUS_2             1             154
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCA5 MUTATED       10      5      2      4
  ABCA5 WILD-TYPE    125    119    123     56
D1217V3, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1            10             125
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             4              56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA5 MUTATED       17      2      2
  ABCA5 WILD-TYPE    236    100     87
D1217V4, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1            17             236
  CLUS_2             2             100
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA5 MUTATED        3     15      3
  ABCA5 WILD-TYPE    161    232    140
D1217V5, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            15             232
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA5 MUTATED        4      5      9      1      2
  ABCA5 WILD-TYPE    117     99     82    120    115
D1217V6, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             5              99
  CLUS_3             9              82
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCA5 MUTATED        0     20      3
  ABCA5 WILD-TYPE    159    231    162
D1217V7, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            20             231
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA5 MUTATED        2     12      8      0      1
  ABCA5 WILD-TYPE    116    119    143     94     80
D1217V8, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             2             116
  CLUS_2            12             119
  CLUS_3             8             143
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA5 MUTATED        0      9      1      3      2
  ABCA5 WILD-TYPE    118    127    114     37     69
D1217V9, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             9             127
  CLUS_3             1             114
  CLUS_4             3              37
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCA5 MUTATED        3      7      3      2      0
  ABCA5 WILD-TYPE     45    102    127     99     92
D1217V10, multiclass
        clus
vv       ABCA5 MUTATED ABCA5 WILD-TYPE
  CLUS_1             3              45
  CLUS_2             7             102
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1218) Variable = PPM1D MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPM1D MUTATED        3      0      1      6
  PPM1D WILD-TYPE    132     92    171    170
D1218V1, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPM1D MUTATED        5      1      2
  PPM1D WILD-TYPE    210    154    160
D1218V2, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPM1D MUTATED        2      3      2      2
  PPM1D WILD-TYPE    133    121    123     58
D1218V3, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             2             133
  CLUS_2             3             121
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPM1D MUTATED        7      1      1
  PPM1D WILD-TYPE    246    101     88
D1218V4, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             7             246
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPM1D MUTATED        2      4      1
  PPM1D WILD-TYPE    162    243    142
D1218V5, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             2             162
  CLUS_2             4             243
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPM1D MUTATED        1      0      4      1      1
  PPM1D WILD-TYPE    120    104     87    120    116
D1218V6, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             120
  CLUS_2             0             104
  CLUS_3             4              87
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PPM1D MUTATED        1      7      2
  PPM1D WILD-TYPE    158    244    163
D1218V7, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             158
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPM1D MUTATED        1      5      2      1      1
  PPM1D WILD-TYPE    117    126    149     93     80
D1218V8, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPM1D MUTATED        1      3      0      2      2
  PPM1D WILD-TYPE    117    133    115     38     69
D1218V9, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             2              38
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPM1D MUTATED        2      3      1      1      1
  PPM1D WILD-TYPE     46    106    129    100     91
D1218V10, multiclass
        clus
vv       PPM1D MUTATED PPM1D WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             1             129
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1219) Variable = CSNK1G1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK1G1 MUTATED        0      1      0      5
  CSNK1G1 WILD-TYPE    135     91    172    171
D1219V1, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               0               172
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G1 MUTATED        5      0      0
  CSNK1G1 WILD-TYPE    210    155    162
D1219V2, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               5               210
  CLUS_2               0               155
  CLUS_3               0               162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CSNK1G1 MUTATED        3      2      0      0
  CSNK1G1 WILD-TYPE    132    122    125     60
D1219V3, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               2               122
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G1 MUTATED        4      1      0
  CSNK1G1 WILD-TYPE    249    101     89
D1219V4, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               4               249
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G1 MUTATED        0      6      1
  CSNK1G1 WILD-TYPE    164    241    142
D1219V5, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               6               241
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G1 MUTATED        1      1      5      0      0
  CSNK1G1 WILD-TYPE    120    103     86    121    117
D1219V6, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               1               103
  CLUS_3               5                86
  CLUS_4               0               121
  CLUS_5               0               117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  CSNK1G1 MUTATED        0      7      0
  CSNK1G1 WILD-TYPE    159    244    165
D1219V7, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               7               244
  CLUS_3               0               165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G1 MUTATED        1      5      1      0      0
  CSNK1G1 WILD-TYPE    117    126    150     94     81
D1219V8, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               1               150
  CLUS_4               0                94
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G1 MUTATED        0      5      0      0      0
  CSNK1G1 WILD-TYPE    118    131    115     40     71
D1219V9, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               5               131
  CLUS_3               0               115
  CLUS_4               0                40
  CLUS_5               0                71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CSNK1G1 MUTATED        0      5      0      0      0
  CSNK1G1 WILD-TYPE     48    104    130    101     92
D1219V10, multiclass
        clus
vv       CSNK1G1 MUTATED CSNK1G1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               5               104
  CLUS_3               0               130
  CLUS_4               0               101
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1220) Variable = TMC2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMC2 MUTATED        1      3      3     12
  TMC2 WILD-TYPE    134     89    169    164
D1220V1, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            3             89
  CLUS_3            3            169
  CLUS_4           12            164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC2 MUTATED       10      1      4
  TMC2 WILD-TYPE    205    154    158
D1220V2, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TMC2 MUTATED        8      4      1      2
  TMC2 WILD-TYPE    127    120    124     58
D1220V3, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            8            127
  CLUS_2            4            120
  CLUS_3            1            124
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC2 MUTATED       13      1      1
  TMC2 WILD-TYPE    240    101     88
D1220V4, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1           13            240
  CLUS_2            1            101
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC2 MUTATED        5     10      2
  TMC2 WILD-TYPE    159    237    141
D1220V5, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            5            159
  CLUS_2           10            237
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC2 MUTATED        2      3      8      2      2
  TMC2 WILD-TYPE    119    101     83    119    115
D1220V6, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            2            119
  CLUS_2            3            101
  CLUS_3            8             83
  CLUS_4            2            119
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  TMC2 MUTATED        3     12      4
  TMC2 WILD-TYPE    156    239    161
D1220V7, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            3            156
  CLUS_2           12            239
  CLUS_3            4            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC2 MUTATED        3      8      5      1      2
  TMC2 WILD-TYPE    115    123    146     93     79
D1220V8, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            3            115
  CLUS_2            8            123
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC2 MUTATED        1      8      3      1      1
  TMC2 WILD-TYPE    117    128    112     39     70
D1220V9, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            128
  CLUS_3            3            112
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TMC2 MUTATED        2      6      3      2      1
  TMC2 WILD-TYPE     46    103    127     99     91
D1220V10, multiclass
        clus
vv       TMC2 MUTATED TMC2 WILD-TYPE
  CLUS_1            2             46
  CLUS_2            6            103
  CLUS_3            3            127
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1221) Variable = XRCC5 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XRCC5 MUTATED        1      1      5      6
  XRCC5 WILD-TYPE    134     91    167    170
D1221V1, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             1              91
  CLUS_3             5             167
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC5 MUTATED        3      5      2
  XRCC5 WILD-TYPE    212    150    160
D1221V2, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             5             150
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  XRCC5 MUTATED        2      4      3      1
  XRCC5 WILD-TYPE    133    120    122     59
D1221V3, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC5 MUTATED        8      0      2
  XRCC5 WILD-TYPE    245    102     87
D1221V4, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             0             102
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC5 MUTATED        4      5      2
  XRCC5 WILD-TYPE    160    242    141
D1221V5, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             4             160
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC5 MUTATED        3      0      4      2      2
  XRCC5 WILD-TYPE    118    104     87    119    115
D1221V6, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             0             104
  CLUS_3             4              87
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  XRCC5 MUTATED        4      7      2
  XRCC5 WILD-TYPE    155    244    163
D1221V7, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             7             244
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC5 MUTATED        2      4      3      2      2
  XRCC5 WILD-TYPE    116    127    148     92     79
D1221V8, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             3             148
  CLUS_4             2              92
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC5 MUTATED        4      4      0      0      2
  XRCC5 WILD-TYPE    114    132    115     40     69
D1221V9, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             4             132
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  XRCC5 MUTATED        2      3      2      1      2
  XRCC5 WILD-TYPE     46    106    128    100     90
D1221V10, multiclass
        clus
vv       XRCC5 MUTATED XRCC5 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1222) Variable = ZNF828 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF828 MUTATED        2      4      1      5
  ZNF828 WILD-TYPE    133     88    171    171
D1222V1, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              4               88
  CLUS_3              1              171
  CLUS_4              5              171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF828 MUTATED        6      3      1
  ZNF828 WILD-TYPE    209    152    161
D1222V2, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              3              152
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF828 MUTATED        6      0      0      2
  ZNF828 WILD-TYPE    129    124    125     58
D1222V3, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              6              129
  CLUS_2              0              124
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF828 MUTATED        8      0      0
  ZNF828 WILD-TYPE    245    102     89
D1222V4, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              0              102
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF828 MUTATED        2      9      1
  ZNF828 WILD-TYPE    162    238    142
D1222V5, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              9              238
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF828 MUTATED        2      5      2      2      1
  ZNF828 WILD-TYPE    119     99     89    119    116
D1222V6, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              5               99
  CLUS_3              2               89
  CLUS_4              2              119
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF828 MUTATED        5      5      2
  ZNF828 WILD-TYPE    154    246    163
D1222V7, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              5              154
  CLUS_2              5              246
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF828 MUTATED        3      6      1      1      1
  ZNF828 WILD-TYPE    115    125    150     93     80
D1222V8, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              3              115
  CLUS_2              6              125
  CLUS_3              1              150
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF828 MUTATED        4      1      2      1      0
  ZNF828 WILD-TYPE    114    135    113     39     71
D1222V9, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              4              114
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF828 MUTATED        1      3      1      2      1
  ZNF828 WILD-TYPE     47    106    129     99     91
D1222V10, multiclass
        clus
vv       ZNF828 MUTATED ZNF828 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              1              129
  CLUS_4              2               99
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1223) Variable = CHST4 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHST4 MUTATED        2      0      0      5
  CHST4 WILD-TYPE    133     92    172    171
D1223V1, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHST4 MUTATED        7      0      0
  CHST4 WILD-TYPE    208    155    162
D1223V2, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CHST4 MUTATED        3      2      0      0
  CHST4 WILD-TYPE    132    122    125     60
D1223V3, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHST4 MUTATED        4      1      0
  CHST4 WILD-TYPE    249    101     89
D1223V4, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHST4 MUTATED        0      6      1
  CHST4 WILD-TYPE    164    241    142
D1223V5, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             6             241
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST4 MUTATED        0      3      3      0      1
  CHST4 WILD-TYPE    121    101     88    121    116
D1223V6, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             3             101
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CHST4 MUTATED        0      6      1
  CHST4 WILD-TYPE    159    245    164
D1223V7, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST4 MUTATED        0      6      0      0      1
  CHST4 WILD-TYPE    118    125    151     94     80
D1223V8, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             0             151
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST4 MUTATED        0      4      1      1      0
  CHST4 WILD-TYPE    118    132    114     39     71
D1223V9, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CHST4 MUTATED        0      5      0      1      0
  CHST4 WILD-TYPE     48    104    130    100     92
D1223V10, multiclass
        clus
vv       CHST4 MUTATED CHST4 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             5             104
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1224) Variable = SMARCC2 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCC2 MUTATED        2      2      6     12
  SMARCC2 WILD-TYPE    133     90    166    164
D1224V1, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               2                90
  CLUS_3               6               166
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCC2 MUTATED        9      2      7
  SMARCC2 WILD-TYPE    206    153    155
D1224V2, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               9               206
  CLUS_2               2               153
  CLUS_3               7               155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMARCC2 MUTATED        3      5      3      4
  SMARCC2 WILD-TYPE    132    119    122     56
D1224V3, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               5               119
  CLUS_3               3               122
  CLUS_4               4                56
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCC2 MUTATED        9      2      4
  SMARCC2 WILD-TYPE    244    100     85
D1224V4, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               9               244
  CLUS_2               2               100
  CLUS_3               4                85
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCC2 MUTATED        3     10      8
  SMARCC2 WILD-TYPE    161    237    135
D1224V5, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               3               161
  CLUS_2              10               237
  CLUS_3               8               135
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCC2 MUTATED        7      3      6      1      4
  SMARCC2 WILD-TYPE    114    101     85    120    113
D1224V6, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               7               114
  CLUS_2               3               101
  CLUS_3               6                85
  CLUS_4               1               120
  CLUS_5               4               113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  SMARCC2 MUTATED        5     12      5
  SMARCC2 WILD-TYPE    154    239    160
D1224V7, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               5               154
  CLUS_2              12               239
  CLUS_3               5               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCC2 MUTATED        6      7      6      1      2
  SMARCC2 WILD-TYPE    112    124    145     93     79
D1224V8, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               6               112
  CLUS_2               7               124
  CLUS_3               6               145
  CLUS_4               1                93
  CLUS_5               2                79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCC2 MUTATED        2      8      3      0      4
  SMARCC2 WILD-TYPE    116    128    112     40     67
D1224V9, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               8               128
  CLUS_3               3               112
  CLUS_4               0                40
  CLUS_5               4                67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMARCC2 MUTATED        2      5      6      3      1
  SMARCC2 WILD-TYPE     46    104    124     98     91
D1224V10, multiclass
        clus
vv       SMARCC2 MUTATED SMARCC2 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               5               104
  CLUS_3               6               124
  CLUS_4               3                98
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1225) Variable = ZNF98 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF98 MUTATED        6      3      3      6
  ZNF98 WILD-TYPE    129     89    169    170
D1225V1, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             6             129
  CLUS_2             3              89
  CLUS_3             3             169
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF98 MUTATED       12      2      2
  ZNF98 WILD-TYPE    203    153    160
D1225V2, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1            12             203
  CLUS_2             2             153
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF98 MUTATED        7      6      2      2
  ZNF98 WILD-TYPE    128    118    123     58
D1225V3, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             6             118
  CLUS_3             2             123
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF98 MUTATED       11      4      2
  ZNF98 WILD-TYPE    242     98     87
D1225V4, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             4              98
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF98 MUTATED        2     11      5
  ZNF98 WILD-TYPE    162    236    138
D1225V5, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            11             236
  CLUS_3             5             138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF98 MUTATED        3      5      8      1      1
  ZNF98 WILD-TYPE    118     99     83    120    116
D1225V6, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             3             118
  CLUS_2             5              99
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ZNF98 MUTATED        1     12      4
  ZNF98 WILD-TYPE    158    239    161
D1225V7, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             1             158
  CLUS_2            12             239
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF98 MUTATED        5      8      2      1      1
  ZNF98 WILD-TYPE    113    123    149     93     80
D1225V8, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             8             123
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF98 MUTATED        1      8      3      1      2
  ZNF98 WILD-TYPE    117    128    112     39     69
D1225V9, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             8             128
  CLUS_3             3             112
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF98 MUTATED        2      6      5      1      1
  ZNF98 WILD-TYPE     46    103    125    100     91
D1225V10, multiclass
        clus
vv       ZNF98 MUTATED ZNF98 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             6             103
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1226) Variable = RGS22 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS22 MUTATED        1      2      4     16
  RGS22 WILD-TYPE    134     90    168    160
D1226V1, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             2              90
  CLUS_3             4             168
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS22 MUTATED       13      2      6
  RGS22 WILD-TYPE    202    153    156
D1226V2, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1            13             202
  CLUS_2             2             153
  CLUS_3             6             156
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RGS22 MUTATED        7     10      1      1
  RGS22 WILD-TYPE    128    114    124     59
D1226V3, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             7             128
  CLUS_2            10             114
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS22 MUTATED       11      7      1
  RGS22 WILD-TYPE    242     95     88
D1226V4, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1            11             242
  CLUS_2             7              95
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS22 MUTATED        3     14      4
  RGS22 WILD-TYPE    161    233    139
D1226V5, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             3             161
  CLUS_2            14             233
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS22 MUTATED        2      7      8      1      3
  RGS22 WILD-TYPE    119     97     83    120    114
D1226V6, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             7              97
  CLUS_3             8              83
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RGS22 MUTATED        3     16      4
  RGS22 WILD-TYPE    156    235    161
D1226V7, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             3             156
  CLUS_2            16             235
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS22 MUTATED        4      7      9      1      2
  RGS22 WILD-TYPE    114    124    142     93     79
D1226V8, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             7             124
  CLUS_3             9             142
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS22 MUTATED        3      4      2      2      9
  RGS22 WILD-TYPE    115    132    113     38     62
D1226V9, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             3             115
  CLUS_2             4             132
  CLUS_3             2             113
  CLUS_4             2              38
  CLUS_5             9              62
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RGS22 MUTATED        2      4      9      4      1
  RGS22 WILD-TYPE     46    105    121     97     91
D1226V10, multiclass
        clus
vv       RGS22 MUTATED RGS22 WILD-TYPE
  CLUS_1             2              46
  CLUS_2             4             105
  CLUS_3             9             121
  CLUS_4             4              97
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1227) Variable = ATOH1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATOH1 MUTATED        0      0      0      6
  ATOH1 WILD-TYPE    135     92    172    170
D1227V1, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ATOH1 MUTATED        3      0      2
  ATOH1 WILD-TYPE    212    155    160
D1227V2, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             3             212
  CLUS_2             0             155
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATOH1 MUTATED        0      3      0      2
  ATOH1 WILD-TYPE    135    121    125     58
D1227V3, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3             121
  CLUS_3             0             125
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ATOH1 MUTATED        4      1      0
  ATOH1 WILD-TYPE    249    101     89
D1227V4, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ATOH1 MUTATED        0      3      3
  ATOH1 WILD-TYPE    164    244    140
D1227V5, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             3             244
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATOH1 MUTATED        0      1      4      0      1
  ATOH1 WILD-TYPE    121    103     87    121    116
D1227V6, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ATOH1 MUTATED        0      5      1
  ATOH1 WILD-TYPE    159    246    164
D1227V7, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             5             246
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATOH1 MUTATED        0      2      4      0      0
  ATOH1 WILD-TYPE    118    129    147     94     81
D1227V8, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATOH1 MUTATED        0      1      0      0      4
  ATOH1 WILD-TYPE    118    135    115     40     67
D1227V9, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             1             135
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATOH1 MUTATED        0      1      4      0      0
  ATOH1 WILD-TYPE     48    108    126    101     92
D1227V10, multiclass
        clus
vv       ATOH1 MUTATED ATOH1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1228) Variable = RBM33 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBM33 MUTATED        3      0      1     16
  RBM33 WILD-TYPE    132     92    171    160
D1228V1, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            16             160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBM33 MUTATED       17      1      2
  RBM33 WILD-TYPE    198    154    160
D1228V2, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1            17             198
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RBM33 MUTATED        7      5      2      1
  RBM33 WILD-TYPE    128    119    123     59
D1228V3, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             7             128
  CLUS_2             5             119
  CLUS_3             2             123
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBM33 MUTATED        9      3      3
  RBM33 WILD-TYPE    244     99     86
D1228V4, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             9             244
  CLUS_2             3              99
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBM33 MUTATED        2     15      4
  RBM33 WILD-TYPE    162    232    139
D1228V5, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             2             162
  CLUS_2            15             232
  CLUS_3             4             139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM33 MUTATED        0      4     13      1      3
  RBM33 WILD-TYPE    121    100     78    120    114
D1228V6, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             4             100
  CLUS_3            13              78
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RBM33 MUTATED        0     17      4
  RBM33 WILD-TYPE    159    234    161
D1228V7, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             0             159
  CLUS_2            17             234
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM33 MUTATED        2      9      9      0      1
  RBM33 WILD-TYPE    116    122    142     94     80
D1228V8, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             9             122
  CLUS_3             9             142
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM33 MUTATED        0     10      2      1      3
  RBM33 WILD-TYPE    118    126    113     39     68
D1228V9, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             0             118
  CLUS_2            10             126
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RBM33 MUTATED        1      6      6      3      0
  RBM33 WILD-TYPE     47    103    124     98     92
D1228V10, multiclass
        clus
vv       RBM33 MUTATED RBM33 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             6             103
  CLUS_3             6             124
  CLUS_4             3              98
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1229) Variable = SLC22A16 MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC22A16 MUTATED        0      1      2      9
  SLC22A16 WILD-TYPE    135     91    170    167
D1229V1, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                0                135
  CLUS_2                1                 91
  CLUS_3                2                170
  CLUS_4                9                167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC22A16 MUTATED        9      0      1
  SLC22A16 WILD-TYPE    206    155    161
D1229V2, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                9                206
  CLUS_2                0                155
  CLUS_3                1                161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLC22A16 MUTATED        3      6      0      0
  SLC22A16 WILD-TYPE    132    118    125     60
D1229V3, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                3                132
  CLUS_2                6                118
  CLUS_3                0                125
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC22A16 MUTATED        6      3      0
  SLC22A16 WILD-TYPE    247     99     89
D1229V4, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                6                247
  CLUS_2                3                 99
  CLUS_3                0                 89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC22A16 MUTATED        1      9      1
  SLC22A16 WILD-TYPE    163    238    142
D1229V5, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                1                163
  CLUS_2                9                238
  CLUS_3                1                142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A16 MUTATED        1      3      5      0      2
  SLC22A16 WILD-TYPE    120    101     86    121    115
D1229V6, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                1                120
  CLUS_2                3                101
  CLUS_3                5                 86
  CLUS_4                0                121
  CLUS_5                2                115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  SLC22A16 MUTATED        2      8      2
  SLC22A16 WILD-TYPE    157    243    163
D1229V7, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                2                157
  CLUS_2                8                243
  CLUS_3                2                163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A16 MUTATED        2      5      5      0      0
  SLC22A16 WILD-TYPE    116    126    146     94     81
D1229V8, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                2                116
  CLUS_2                5                126
  CLUS_3                5                146
  CLUS_4                0                 94
  CLUS_5                0                 81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A16 MUTATED        1      4      1      0      4
  SLC22A16 WILD-TYPE    117    132    114     40     67
D1229V9, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                1                117
  CLUS_2                4                132
  CLUS_3                1                114
  CLUS_4                0                 40
  CLUS_5                4                 67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLC22A16 MUTATED        1      5      3      1      0
  SLC22A16 WILD-TYPE     47    104    127    100     92
D1229V10, multiclass
        clus
vv       SLC22A16 MUTATED SLC22A16 WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                5                104
  CLUS_3                3                127
  CLUS_4                1                100
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1230) Variable = SMAD2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAD2 MUTATED        2      1      2      6
  SMAD2 WILD-TYPE    133     91    170    170
D1230V1, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1              91
  CLUS_3             2             170
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD2 MUTATED        5      2      1
  SMAD2 WILD-TYPE    210    153    161
D1230V2, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             2             153
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SMAD2 MUTATED        2      4      0      1
  SMAD2 WILD-TYPE    133    120    125     59
D1230V3, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD2 MUTATED        4      3      0
  SMAD2 WILD-TYPE    249     99     89
D1230V4, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             3              99
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD2 MUTATED        2      8      1
  SMAD2 WILD-TYPE    162    239    142
D1230V5, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD2 MUTATED        0      2      7      2      0
  SMAD2 WILD-TYPE    121    102     84    119    117
D1230V6, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             7              84
  CLUS_4             2             119
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SMAD2 MUTATED        3      8      0
  SMAD2 WILD-TYPE    156    243    165
D1230V7, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             3             156
  CLUS_2             8             243
  CLUS_3             0             165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD2 MUTATED        0      4      5      2      0
  SMAD2 WILD-TYPE    118    127    146     92     81
D1230V8, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             4             127
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD2 MUTATED        2      3      0      0      2
  SMAD2 WILD-TYPE    116    133    115     40     69
D1230V9, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             3             133
  CLUS_3             0             115
  CLUS_4             0              40
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SMAD2 MUTATED        0      1      4      0      2
  SMAD2 WILD-TYPE     48    108    126    101     90
D1230V10, multiclass
        clus
vv       SMAD2 MUTATED SMAD2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1231) Variable = FIGNL1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FIGNL1 MUTATED        2      2      1      7
  FIGNL1 WILD-TYPE    133     90    171    169
D1231V1, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              2               90
  CLUS_3              1              171
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FIGNL1 MUTATED        8      1      1
  FIGNL1 WILD-TYPE    207    154    161
D1231V2, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              8              207
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  FIGNL1 MUTATED        2      6      1      0
  FIGNL1 WILD-TYPE    133    118    124     60
D1231V3, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              2              133
  CLUS_2              6              118
  CLUS_3              1              124
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FIGNL1 MUTATED        5      3      1
  FIGNL1 WILD-TYPE    248     99     88
D1231V4, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              3               99
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FIGNL1 MUTATED        2      6      3
  FIGNL1 WILD-TYPE    162    241    140
D1231V5, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              2              162
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FIGNL1 MUTATED        0      2      6      1      2
  FIGNL1 WILD-TYPE    121    102     85    120    115
D1231V6, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              6               85
  CLUS_4              1              120
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  FIGNL1 MUTATED        3      8      1
  FIGNL1 WILD-TYPE    156    243    164
D1231V7, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              3              156
  CLUS_2              8              243
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FIGNL1 MUTATED        1      5      4      1      1
  FIGNL1 WILD-TYPE    117    126    147     93     80
D1231V8, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              4              147
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FIGNL1 MUTATED        1      5      1      1      2
  FIGNL1 WILD-TYPE    117    131    114     39     69
D1231V9, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              131
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  FIGNL1 MUTATED        0      6      2      1      1
  FIGNL1 WILD-TYPE     48    103    128    100     91
D1231V10, multiclass
        clus
vv       FIGNL1 MUTATED FIGNL1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              6              103
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1232) Variable = KDELR2 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDELR2 MUTATED        1      1      2      1
  KDELR2 WILD-TYPE    134     91    170    175
D1232V1, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              2              170
  CLUS_4              1              175
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KDELR2 MUTATED        1      1      3
  KDELR2 WILD-TYPE    214    154    159
D1232V2, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              1              214
  CLUS_2              1              154
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  KDELR2 MUTATED        1      2      0      0
  KDELR2 WILD-TYPE    134    122    125     60
D1232V3, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              0               60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KDELR2 MUTATED        2      1      0
  KDELR2 WILD-TYPE    251    101     89
D1232V4, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KDELR2 MUTATED        0      3      1
  KDELR2 WILD-TYPE    164    244    142
D1232V5, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDELR2 MUTATED        1      1      1      1      0
  KDELR2 WILD-TYPE    120    103     90    120    117
D1232V6, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              1              103
  CLUS_3              1               90
  CLUS_4              1              120
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  KDELR2 MUTATED        1      3      1
  KDELR2 WILD-TYPE    158    248    164
D1232V7, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              3              248
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDELR2 MUTATED        0      2      1      2      0
  KDELR2 WILD-TYPE    118    129    150     92     81
D1232V8, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              129
  CLUS_3              1              150
  CLUS_4              2               92
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDELR2 MUTATED        1      2      1      0      0
  KDELR2 WILD-TYPE    117    134    114     40     71
D1232V9, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  KDELR2 MUTATED        0      1      1      0      2
  KDELR2 WILD-TYPE     48    108    129    101     90
D1232V10, multiclass
        clus
vv       KDELR2 MUTATED KDELR2 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              1              129
  CLUS_4              0              101
  CLUS_5              2               90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1233) Variable = NOLC1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOLC1 MUTATED        4      4      1      6
  NOLC1 WILD-TYPE    131     88    171    170
D1233V1, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             4             131
  CLUS_2             4              88
  CLUS_3             1             171
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOLC1 MUTATED        4      4      4
  NOLC1 WILD-TYPE    211    151    158
D1233V2, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             4             211
  CLUS_2             4             151
  CLUS_3             4             158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NOLC1 MUTATED        3      3      3      2
  NOLC1 WILD-TYPE    132    121    122     58
D1233V3, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             3             122
  CLUS_4             2              58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOLC1 MUTATED        6      3      2
  NOLC1 WILD-TYPE    247     99     87
D1233V4, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             6             247
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOLC1 MUTATED        2      7      6
  NOLC1 WILD-TYPE    162    240    137
D1233V5, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             7             240
  CLUS_3             6             137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOLC1 MUTATED        4      4      2      1      4
  NOLC1 WILD-TYPE    117    100     89    120    113
D1233V6, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             4             117
  CLUS_2             4             100
  CLUS_3             2              89
  CLUS_4             1             120
  CLUS_5             4             113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  NOLC1 MUTATED        4      6      5
  NOLC1 WILD-TYPE    155    245    160
D1233V7, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             4             155
  CLUS_2             6             245
  CLUS_3             5             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOLC1 MUTATED        5      3      3      1      3
  NOLC1 WILD-TYPE    113    128    148     93     78
D1233V8, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             5             113
  CLUS_2             3             128
  CLUS_3             3             148
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOLC1 MUTATED        4      2      2      0      4
  NOLC1 WILD-TYPE    114    134    113     40     67
D1233V9, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             4             114
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             0              40
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NOLC1 MUTATED        1      3      5      2      1
  NOLC1 WILD-TYPE     47    106    125     99     91
D1233V10, multiclass
        clus
vv       NOLC1 MUTATED NOLC1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             5             125
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1234) Variable = NF1 MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED        8      3      4     20
  NF1 WILD-TYPE    127     89    168    156
D1234V1, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           8           127
  CLUS_2           3            89
  CLUS_3           4           168
  CLUS_4          20           156
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       17      6      4
  NF1 WILD-TYPE    198    149    158
D1234V2, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          17           198
  CLUS_2           6           149
  CLUS_3           4           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  NF1 MUTATED       13     13      3      2
  NF1 WILD-TYPE    122    111    122     58
D1234V3, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          13           122
  CLUS_2          13           111
  CLUS_3           3           122
  CLUS_4           2            58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED       21      7      3
  NF1 WILD-TYPE    232     95     86
D1234V4, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1          21           232
  CLUS_2           7            95
  CLUS_3           3            86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED        7     18      9
  NF1 WILD-TYPE    157    229    134
D1234V5, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           7           157
  CLUS_2          18           229
  CLUS_3           9           134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NF1 MUTATED        4      6     14      3      7
  NF1 WILD-TYPE    117     98     77    118    110
D1234V6, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           4           117
  CLUS_2           6            98
  CLUS_3          14            77
  CLUS_4           3           118
  CLUS_5           7           110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  NF1 MUTATED        8     20      7
  NF1 WILD-TYPE    151    231    158
D1234V7, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           8           151
  CLUS_2          20           231
  CLUS_3           7           158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NF1 MUTATED        3     16      8      3      5
  NF1 WILD-TYPE    115    115    143     91     76
D1234V8, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           3           115
  CLUS_2          16           115
  CLUS_3           8           143
  CLUS_4           3            91
  CLUS_5           5            76
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NF1 MUTATED        5      8      2      2      6
  NF1 WILD-TYPE    113    128    113     38     65
D1234V9, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           5           113
  CLUS_2           8           128
  CLUS_3           2           113
  CLUS_4           2            38
  CLUS_5           6            65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  NF1 MUTATED        2      9      7      2      3
  NF1 WILD-TYPE     46    100    123     99     89
D1234V10, multiclass
        clus
vv       NF1 MUTATED NF1 WILD-TYPE
  CLUS_1           2            46
  CLUS_2           9           100
  CLUS_3           7           123
  CLUS_4           2            99
  CLUS_5           3            89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1235) Variable = GSDMB MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GSDMB MUTATED        1      0      0      4
  GSDMB WILD-TYPE    134     92    172    172
D1235V1, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMB MUTATED        4      1      0
  GSDMB WILD-TYPE    211    154    162
D1235V2, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             4             211
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GSDMB MUTATED        1      1      0      0
  GSDMB WILD-TYPE    134    123    125     60
D1235V3, multiclass
[1] "Remove cluster labels:" "GSDMB MUTATED"         
clus
  GSDMB MUTATED GSDMB WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CD-A4MJ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304      TCGA-CG-4305 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4306      TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916      TCGA-FP-7998 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8602 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF      TCGA-HU-A4GQ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMB MUTATED        1      1      0
  GSDMB WILD-TYPE    252    101     89
D1235V4, multiclass
[1] "Remove cluster labels:" "GSDMB MUTATED"         
clus
  GSDMB MUTATED GSDMB WILD-TYPE 
              2             442 
     TCGA-2H-A9GF      TCGA-2H-A9GI      TCGA-2H-A9GL      TCGA-2H-A9GQ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-2H-A9GR      TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-B7-A5TJ      TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-4183 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4184      TCGA-BR-4187      TCGA-BR-4188      TCGA-BR-4191 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4201      TCGA-BR-4253      TCGA-BR-4255      TCGA-BR-4256 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4257      TCGA-BR-4267      TCGA-BR-4279      TCGA-BR-4280 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4292      TCGA-BR-4294      TCGA-BR-4357      TCGA-BR-4361 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4362      TCGA-BR-4363      TCGA-BR-4366      TCGA-BR-4368 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-4369      TCGA-BR-4370      TCGA-BR-4371      TCGA-BR-6452 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6453      TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6457      TCGA-BR-6458      TCGA-BR-6564      TCGA-BR-6565 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7715      TCGA-BR-7716 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723      TCGA-BR-7851 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8080 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8081      TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8289      TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8360      TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8365      TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590      TCGA-BR-8591 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677      TCGA-BR-8678 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8679      TCGA-BR-8682      TCGA-BR-8683      TCGA-BR-8686 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T      TCGA-BR-A44U 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J2      TCGA-BR-A4J4 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4J5      TCGA-BR-A4J6      TCGA-BR-A4J7      TCGA-BR-A4J8 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4PD      TCGA-BR-A4PE      TCGA-BR-A4PF      TCGA-BR-A4QI 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8528      TCGA-CD-8529 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-8530      TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-8534      TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-A487      TCGA-CD-A489      TCGA-CD-A48A      TCGA-CD-A48C 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CD-A4MG      TCGA-CD-A4MH      TCGA-CD-A4MI      TCGA-CD-A4MJ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4300      TCGA-CG-4301      TCGA-CG-4304      TCGA-CG-4305 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4306      TCGA-CG-4436      TCGA-CG-4437      TCGA-CG-4438 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4442      TCGA-CG-4443      TCGA-CG-4444      TCGA-CG-4449 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4455      TCGA-CG-4460      TCGA-CG-4465      TCGA-CG-4466 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4469      TCGA-CG-4474      TCGA-CG-4475      TCGA-CG-4476 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-4477      TCGA-CG-5716      TCGA-CG-5717      TCGA-CG-5718 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5719      TCGA-CG-5720      TCGA-CG-5721      TCGA-CG-5723 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5724      TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5728      TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-CG-5734      TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6518      TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6522      TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6527 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8578 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV      TCGA-D7-A4YX 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6EV      TCGA-D7-A6EX 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A748 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874      TCGA-F1-6875 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7916      TCGA-FP-7998 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HF-7136      TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8602 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4GF      TCGA-HU-A4GQ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-A4GT      TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-HU-A4HD      TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A3QL      TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A3YC      TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A50L      TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A625      TCGA-IG-A6QS      TCGA-IG-A8O2      TCGA-IG-A97H 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RL      TCGA-IN-A6RN 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IN-A6RO      TCGA-IN-A6RR      TCGA-IN-A6RS      TCGA-IN-A7NR 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IN-A7NT      TCGA-IN-A7NU      TCGA-IN-AB1V      TCGA-IN-AB1X 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-IP-7968      TCGA-JY-A6F8      TCGA-JY-A6FA      TCGA-JY-A6FB 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-JY-A6FD      TCGA-JY-A6FE      TCGA-JY-A6FG      TCGA-JY-A939 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-JY-A93E      TCGA-JY-A93F      TCGA-KB-A6F5      TCGA-KB-A93G 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OJ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4ON      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88W      TCGA-L5-A891      TCGA-L5-A8NE 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A8NF      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NQ      TCGA-L5-A8NS      TCGA-L5-A8NT 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A49Y      TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A4A4      TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A4A9      TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A5U6      TCGA-LN-A5U7      TCGA-LN-A7HW      TCGA-LN-A7HX 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-Q9-A6FU 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-Q9-A6FW      TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-VQ-A8DL      TCGA-VQ-A8DT 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-A8DU      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91U      TCGA-VQ-A91V      TCGA-VQ-A92D 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-AA64      TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VQ-AA6F      TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6K 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8Q7 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-VR-AA4D      TCGA-VR-AA7B      TCGA-X8-AAAR      TCGA-XP-A8T6 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-XP-A8T7      TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
     TCGA-Z6-AAPN      TCGA-ZA-A8F6 
"GSDMB WILD-TYPE" "GSDMB WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMB MUTATED        1      4      0
  GSDMB WILD-TYPE    163    243    143
D1235V5, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             0             143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMB MUTATED        0      1      4      0      0
  GSDMB WILD-TYPE    121    103     87    121    117
D1235V6, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             4              87
  CLUS_4             0             121
  CLUS_5             0             117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GSDMB MUTATED        0      4      1
  GSDMB WILD-TYPE    159    247    164
D1235V7, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             0             159
  CLUS_2             4             247
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMB MUTATED        1      4      0      0      0
  GSDMB WILD-TYPE    117    127    151     94     81
D1235V8, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             0             151
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMB MUTATED        0      3      1      1      0
  GSDMB WILD-TYPE    118    133    114     39     71
D1235V9, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GSDMB MUTATED        1      3      0      1      0
  GSDMB WILD-TYPE     47    106    130    100     92
D1235V10, multiclass
        clus
vv       GSDMB MUTATED GSDMB WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             0             130
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1236) Variable = PPP1R12C MUTATION ANALYSIS
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP1R12C MUTATED        1      0      1      9
  PPP1R12C WILD-TYPE    134     92    171    167
D1236V1, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                1                134
  CLUS_2                0                 92
  CLUS_3                1                171
  CLUS_4                9                167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R12C MUTATED       10      0      0
  PPP1R12C WILD-TYPE    205    155    162
D1236V2, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1               10                205
  CLUS_2                0                155
  CLUS_3                0                162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PPP1R12C MUTATED        6      1      2      0
  PPP1R12C WILD-TYPE    129    123    123     60
D1236V3, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                6                129
  CLUS_2                1                123
  CLUS_3                2                123
  CLUS_4                0                 60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R12C MUTATED        7      1      1
  PPP1R12C WILD-TYPE    246    101     88
D1236V4, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                7                246
  CLUS_2                1                101
  CLUS_3                1                 88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R12C MUTATED        2      6      3
  PPP1R12C WILD-TYPE    162    241    140
D1236V5, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                2                162
  CLUS_2                6                241
  CLUS_3                3                140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R12C MUTATED        0      2      7      1      1
  PPP1R12C WILD-TYPE    121    102     84    120    116
D1236V6, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                0                121
  CLUS_2                2                102
  CLUS_3                7                 84
  CLUS_4                1                120
  CLUS_5                1                116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3
  PPP1R12C MUTATED        0     10      1
  PPP1R12C WILD-TYPE    159    241    164
D1236V7, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                0                159
  CLUS_2               10                241
  CLUS_3                1                164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R12C MUTATED        0      6      4      0      1
  PPP1R12C WILD-TYPE    118    125    147     94     80
D1236V8, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                0                118
  CLUS_2                6                125
  CLUS_3                4                147
  CLUS_4                0                 94
  CLUS_5                1                 80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R12C MUTATED        0      7      1      1      1
  PPP1R12C WILD-TYPE    118    129    114     39     70
D1236V9, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                0                118
  CLUS_2                7                129
  CLUS_3                1                114
  CLUS_4                1                 39
  CLUS_5                1                 70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                    vv
clus                 CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PPP1R12C MUTATED        1      6      3      0      0
  PPP1R12C WILD-TYPE     47    103    127    101     92
D1236V10, multiclass
        clus
vv       PPP1R12C MUTATED PPP1R12C WILD-TYPE
  CLUS_1                1                 47
  CLUS_2                6                103
  CLUS_3                3                127
  CLUS_4                0                101
  CLUS_5                0                 92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1237) Variable = PELI2 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PELI2 MUTATED        0      3      2      6
  PELI2 WILD-TYPE    135     89    170    170
D1237V1, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             3              89
  CLUS_3             2             170
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PELI2 MUTATED        7      2      0
  PELI2 WILD-TYPE    208    153    162
D1237V2, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             7             208
  CLUS_2             2             153
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PELI2 MUTATED        2      4      3      1
  PELI2 WILD-TYPE    133    120    122     59
D1237V3, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             4             120
  CLUS_3             3             122
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PELI2 MUTATED        5      2      3
  PELI2 WILD-TYPE    248    100     86
D1237V4, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             2             100
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PELI2 MUTATED        2      6      2
  PELI2 WILD-TYPE    162    241    141
D1237V5, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             6             241
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PELI2 MUTATED        0      4      2      2      2
  PELI2 WILD-TYPE    121    100     89    119    115
D1237V6, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             4             100
  CLUS_3             2              89
  CLUS_4             2             119
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PELI2 MUTATED        1      6      4
  PELI2 WILD-TYPE    158    245    161
D1237V7, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             4             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PELI2 MUTATED        0      3      5      2      1
  PELI2 WILD-TYPE    118    128    146     92     80
D1237V8, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             5             146
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PELI2 MUTATED        1      3      1      1      3
  PELI2 WILD-TYPE    117    133    114     39     68
D1237V9, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             3              68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PELI2 MUTATED        0      3      3      1      2
  PELI2 WILD-TYPE     48    106    127    100     90
D1237V10, multiclass
        clus
vv       PELI2 MUTATED PELI2 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             3             106
  CLUS_3             3             127
  CLUS_4             1             100
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1238) Variable = UNC93B1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UNC93B1 MUTATED        2      3      2      2
  UNC93B1 WILD-TYPE    133     89    170    174
D1238V1, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               3                89
  CLUS_3               2               170
  CLUS_4               2               174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  UNC93B1 MUTATED        6      2      1
  UNC93B1 WILD-TYPE    209    153    161
D1238V2, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               6               209
  CLUS_2               2               153
  CLUS_3               1               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  UNC93B1 MUTATED        4      1      3      0
  UNC93B1 WILD-TYPE    131    123    122     60
D1238V3, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               4               131
  CLUS_2               1               123
  CLUS_3               3               122
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  UNC93B1 MUTATED        6      1      1
  UNC93B1 WILD-TYPE    247    101     88
D1238V4, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               6               247
  CLUS_2               1               101
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  UNC93B1 MUTATED        2      5      1
  UNC93B1 WILD-TYPE    162    242    142
D1238V5, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               5               242
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UNC93B1 MUTATED        0      3      2      2      1
  UNC93B1 WILD-TYPE    121    101     89    119    116
D1238V6, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               3               101
  CLUS_3               2                89
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  UNC93B1 MUTATED        1      7      1
  UNC93B1 WILD-TYPE    158    244    164
D1238V7, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               1               158
  CLUS_2               7               244
  CLUS_3               1               164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UNC93B1 MUTATED        1      1      5      2      0
  UNC93B1 WILD-TYPE    117    130    146     92     81
D1238V8, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               1               130
  CLUS_3               5               146
  CLUS_4               2                92
  CLUS_5               0                81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UNC93B1 MUTATED        2      2      1      1      3
  UNC93B1 WILD-TYPE    116    134    114     39     68
D1238V9, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               3                68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  UNC93B1 MUTATED        0      2      4      1      2
  UNC93B1 WILD-TYPE     48    107    126    100     90
D1238V10, multiclass
        clus
vv       UNC93B1 MUTATED UNC93B1 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               2               107
  CLUS_3               4               126
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1239) Variable = PRKCD MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        1      3      1      7
  PRKCD WILD-TYPE    134     89    171    169
D1239V1, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             1             134
  CLUS_2             3              89
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        9      0      0
  PRKCD WILD-TYPE    206    155    162
D1239V2, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             9             206
  CLUS_2             0             155
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PRKCD MUTATED        3      3      1      1
  PRKCD WILD-TYPE    132    121    124     59
D1239V3, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             3             132
  CLUS_2             3             121
  CLUS_3             1             124
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        6      1      1
  PRKCD WILD-TYPE    247    101     88
D1239V4, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             6             247
  CLUS_2             1             101
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        1      9      1
  PRKCD WILD-TYPE    163    238    142
D1239V5, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             1             163
  CLUS_2             9             238
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKCD MUTATED        1      3      6      0      1
  PRKCD WILD-TYPE    120    101     85    121    116
D1239V6, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             1             120
  CLUS_2             3             101
  CLUS_3             6              85
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  PRKCD MUTATED        1     10      1
  PRKCD WILD-TYPE    158    241    164
D1239V7, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             1             158
  CLUS_2            10             241
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKCD MUTATED        1      7      4      0      0
  PRKCD WILD-TYPE    117    124    147     94     81
D1239V8, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             1             117
  CLUS_2             7             124
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKCD MUTATED        0      8      0      1      0
  PRKCD WILD-TYPE    118    128    115     39     71
D1239V9, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             0             118
  CLUS_2             8             128
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PRKCD MUTATED        1      5      3      0      0
  PRKCD WILD-TYPE     47    104    127    101     92
D1239V10, multiclass
        clus
vv       PRKCD MUTATED PRKCD WILD-TYPE
  CLUS_1             1              47
  CLUS_2             5             104
  CLUS_3             3             127
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1240) Variable = TESK1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TESK1 MUTATED        1      0      1     11
  TESK1 WILD-TYPE    134     92    171    165
D1240V1, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4            11             165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TESK1 MUTATED       10      1      1
  TESK1 WILD-TYPE    205    154    161
D1240V2, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1            10             205
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TESK1 MUTATED        5      3      2      0
  TESK1 WILD-TYPE    130    121    123     60
D1240V3, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             3             121
  CLUS_3             2             123
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TESK1 MUTATED        5      3      2
  TESK1 WILD-TYPE    248     99     87
D1240V4, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             5             248
  CLUS_2             3              99
  CLUS_3             2              87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TESK1 MUTATED        2      8      2
  TESK1 WILD-TYPE    162    239    141
D1240V5, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             2             162
  CLUS_2             8             239
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TESK1 MUTATED        0      2      6      1      3
  TESK1 WILD-TYPE    121    102     85    120    114
D1240V6, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             2             102
  CLUS_3             6              85
  CLUS_4             1             120
  CLUS_5             3             114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  TESK1 MUTATED        1      9      3
  TESK1 WILD-TYPE    158    242    162
D1240V7, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             9             242
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TESK1 MUTATED        0      6      4      1      2
  TESK1 WILD-TYPE    118    125    147     93     79
D1240V8, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             6             125
  CLUS_3             4             147
  CLUS_4             1              93
  CLUS_5             2              79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TESK1 MUTATED        1      3      2      1      4
  TESK1 WILD-TYPE    117    133    113     39     67
D1240V9, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             3             133
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TESK1 MUTATED        0      4      5      1      1
  TESK1 WILD-TYPE     48    105    125    100     91
D1240V10, multiclass
        clus
vv       TESK1 MUTATED TESK1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             5             125
  CLUS_4             1             100
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1241) Variable = GLTPD1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLTPD1 MUTATED        0      0      0      4
  GLTPD1 WILD-TYPE    135     92    172    172
D1241V1, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              4              172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLTPD1 MUTATED        3      0      1
  GLTPD1 WILD-TYPE    212    155    161
D1241V2, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GLTPD1 MUTATED        1      2      0      1
  GLTPD1 WILD-TYPE    134    122    125     59
D1241V3, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              2              122
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLTPD1 MUTATED        3      1      0
  GLTPD1 WILD-TYPE    250    101     89
D1241V4, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              3              250
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLTPD1 MUTATED        1      0      2
  GLTPD1 WILD-TYPE    163    247    141
D1241V5, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              0              247
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLTPD1 MUTATED        0      0      1      0      2
  GLTPD1 WILD-TYPE    121    104     90    121    115
D1241V6, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              0              104
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GLTPD1 MUTATED        1      1      2
  GLTPD1 WILD-TYPE    158    250    163
D1241V7, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2              1              250
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLTPD1 MUTATED        0      1      2      0      1
  GLTPD1 WILD-TYPE    118    130    149     94     80
D1241V8, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              2              149
  CLUS_4              0               94
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLTPD1 MUTATED        0      1      1      0      2
  GLTPD1 WILD-TYPE    118    135    114     40     69
D1241V9, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GLTPD1 MUTATED        0      1      2      1      0
  GLTPD1 WILD-TYPE     48    108    128    100     92
D1241V10, multiclass
        clus
vv       GLTPD1 MUTATED GLTPD1 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              2              128
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1242) Variable = ST8SIA6 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST8SIA6 MUTATED        0      1      3      6
  ST8SIA6 WILD-TYPE    135     91    169    170
D1242V1, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               0               135
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4               6               170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST8SIA6 MUTATED        7      1      2
  ST8SIA6 WILD-TYPE    208    154    160
D1242V2, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               7               208
  CLUS_2               1               154
  CLUS_3               2               160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ST8SIA6 MUTATED        5      1      1      1
  ST8SIA6 WILD-TYPE    130    123    124     59
D1242V3, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               5               130
  CLUS_2               1               123
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST8SIA6 MUTATED        7      0      1
  ST8SIA6 WILD-TYPE    246    102     88
D1242V4, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               7               246
  CLUS_2               0               102
  CLUS_3               1                88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST8SIA6 MUTATED        0      8      2
  ST8SIA6 WILD-TYPE    164    239    141
D1242V5, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               0               164
  CLUS_2               8               239
  CLUS_3               2               141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ST8SIA6 MUTATED        0      1      7      0      2
  ST8SIA6 WILD-TYPE    121    103     84    121    115
D1242V6, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               0               121
  CLUS_2               1               103
  CLUS_3               7                84
  CLUS_4               0               121
  CLUS_5               2               115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  ST8SIA6 MUTATED        0      8      2
  ST8SIA6 WILD-TYPE    159    243    163
D1242V7, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               0               159
  CLUS_2               8               243
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ST8SIA6 MUTATED        1      5      3      0      1
  ST8SIA6 WILD-TYPE    117    126    148     94     80
D1242V8, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               1               117
  CLUS_2               5               126
  CLUS_3               3               148
  CLUS_4               0                94
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ST8SIA6 MUTATED        0      4      1      1      2
  ST8SIA6 WILD-TYPE    118    132    114     39     69
D1242V9, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               0               118
  CLUS_2               4               132
  CLUS_3               1               114
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ST8SIA6 MUTATED        0      3      3      2      0
  ST8SIA6 WILD-TYPE     48    106    127     99     92
D1242V10, multiclass
        clus
vv       ST8SIA6 MUTATED ST8SIA6 WILD-TYPE
  CLUS_1               0                48
  CLUS_2               3               106
  CLUS_3               3               127
  CLUS_4               2                99
  CLUS_5               0                92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1243) Variable = ATP11B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP11B MUTATED        3      1      1      8
  ATP11B WILD-TYPE    132     91    171    168
D1243V1, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              3              132
  CLUS_2              1               91
  CLUS_3              1              171
  CLUS_4              8              168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP11B MUTATED        8      2      3
  ATP11B WILD-TYPE    207    153    159
D1243V2, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              8              207
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ATP11B MUTATED        5      4      0      1
  ATP11B WILD-TYPE    130    120    125     59
D1243V3, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              5              130
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP11B MUTATED        8      2      0
  ATP11B WILD-TYPE    245    100     89
D1243V4, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              8              245
  CLUS_2              2              100
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP11B MUTATED        5      6      2
  ATP11B WILD-TYPE    159    241    141
D1243V5, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              5              159
  CLUS_2              6              241
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP11B MUTATED        2      3      4      1      3
  ATP11B WILD-TYPE    119    101     87    120    114
D1243V6, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ATP11B MUTATED        4      6      3
  ATP11B WILD-TYPE    155    245    162
D1243V7, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              4              155
  CLUS_2              6              245
  CLUS_3              3              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP11B MUTATED        1      5      5      1      1
  ATP11B WILD-TYPE    117    126    146     93     80
D1243V8, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              1              117
  CLUS_2              5              126
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP11B MUTATED        2      4      1      2      3
  ATP11B WILD-TYPE    116    132    114     38     68
D1243V9, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              4              132
  CLUS_3              1              114
  CLUS_4              2               38
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ATP11B MUTATED        2      4      4      1      1
  ATP11B WILD-TYPE     46    105    126    100     91
D1243V10, multiclass
        clus
vv       ATP11B MUTATED ATP11B WILD-TYPE
  CLUS_1              2               46
  CLUS_2              4              105
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1244) Variable = SRP68 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRP68 MUTATED        1      0      2      5
  SRP68 WILD-TYPE    134     92    170    171
D1244V1, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             5             171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP68 MUTATED        5      1      2
  SRP68 WILD-TYPE    210    154    160
D1244V2, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             1             154
  CLUS_3             2             160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SRP68 MUTATED        2      2      0      1
  SRP68 WILD-TYPE    133    122    125     59
D1244V3, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             2             122
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP68 MUTATED        4      0      1
  SRP68 WILD-TYPE    249    102     88
D1244V4, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             4             249
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP68 MUTATED        1      5      2
  SRP68 WILD-TYPE    163    242    141
D1244V5, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP68 MUTATED        2      2      2      0      2
  SRP68 WILD-TYPE    119    102     89    121    115
D1244V6, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             2             102
  CLUS_3             2              89
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  SRP68 MUTATED        1      6      1
  SRP68 WILD-TYPE    158    245    164
D1244V7, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             1             158
  CLUS_2             6             245
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP68 MUTATED        1      4      2      0      1
  SRP68 WILD-TYPE    117    127    149     94     80
D1244V8, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             127
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP68 MUTATED        1      4      1      0      1
  SRP68 WILD-TYPE    117    132    114     40     70
D1244V9, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             4             132
  CLUS_3             1             114
  CLUS_4             0              40
  CLUS_5             1              70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SRP68 MUTATED        1      3      2      1      0
  SRP68 WILD-TYPE     47    106    128    100     92
D1244V10, multiclass
        clus
vv       SRP68 MUTATED SRP68 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             3             106
  CLUS_3             2             128
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1245) Variable = ABCD1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCD1 MUTATED        0      1      3      6
  ABCD1 WILD-TYPE    135     91    169    170
D1245V1, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             1              91
  CLUS_3             3             169
  CLUS_4             6             170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCD1 MUTATED        8      0      1
  ABCD1 WILD-TYPE    207    155    161
D1245V2, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             8             207
  CLUS_2             0             155
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ABCD1 MUTATED        5      4      0      0
  ABCD1 WILD-TYPE    130    120    125     60
D1245V3, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             5             130
  CLUS_2             4             120
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCD1 MUTATED        7      2      0
  ABCD1 WILD-TYPE    246    100     89
D1245V4, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             7             246
  CLUS_2             2             100
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCD1 MUTATED        1      7      2
  ABCD1 WILD-TYPE    163    240    141
D1245V5, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             7             240
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCD1 MUTATED        0      1      7      0      2
  ABCD1 WILD-TYPE    121    103     84    121    115
D1245V6, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             7              84
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  ABCD1 MUTATED        0      8      2
  ABCD1 WILD-TYPE    159    243    163
D1245V7, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             8             243
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCD1 MUTATED        2      4      4      0      0
  ABCD1 WILD-TYPE    116    127    147     94     81
D1245V8, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             2             116
  CLUS_2             4             127
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCD1 MUTATED        0      2      1      1      4
  ABCD1 WILD-TYPE    118    134    114     39     67
D1245V9, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             134
  CLUS_3             1             114
  CLUS_4             1              39
  CLUS_5             4              67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ABCD1 MUTATED        1      2      4      1      0
  ABCD1 WILD-TYPE     47    107    126    100     92
D1245V10, multiclass
        clus
vv       ABCD1 MUTATED ABCD1 WILD-TYPE
  CLUS_1             1              47
  CLUS_2             2             107
  CLUS_3             4             126
  CLUS_4             1             100
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1246) Variable = MCTP1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCTP1 MUTATED        0      0      2      8
  MCTP1 WILD-TYPE    135     92    170    168
D1246V1, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             2             170
  CLUS_4             8             168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCTP1 MUTATED        5      0      3
  MCTP1 WILD-TYPE    210    155    159
D1246V2, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             5             210
  CLUS_2             0             155
  CLUS_3             3             159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  MCTP1 MUTATED        3      5      0      1
  MCTP1 WILD-TYPE    132    119    125     59
D1246V3, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             3             132
  CLUS_2             5             119
  CLUS_3             0             125
  CLUS_4             1              59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCTP1 MUTATED        8      1      0
  MCTP1 WILD-TYPE    245    101     89
D1246V4, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             8             245
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCTP1 MUTATED        1      5      3
  MCTP1 WILD-TYPE    163    242    140
D1246V5, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             1             163
  CLUS_2             5             242
  CLUS_3             3             140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCTP1 MUTATED        2      0      5      0      2
  MCTP1 WILD-TYPE    119    104     86    121    115
D1246V6, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             2             119
  CLUS_2             0             104
  CLUS_3             5              86
  CLUS_4             0             121
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  MCTP1 MUTATED        0      8      2
  MCTP1 WILD-TYPE    159    243    163
D1246V7, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             8             243
  CLUS_3             2             163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCTP1 MUTATED        1      5      4      0      0
  MCTP1 WILD-TYPE    117    126    147     94     81
D1246V8, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             1             117
  CLUS_2             5             126
  CLUS_3             4             147
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCTP1 MUTATED        0      5      0      1      2
  MCTP1 WILD-TYPE    118    131    115     39     69
D1246V9, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             5             131
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  MCTP1 MUTATED        0      4      4      0      0
  MCTP1 WILD-TYPE     48    105    126    101     92
D1246V10, multiclass
        clus
vv       MCTP1 MUTATED MCTP1 WILD-TYPE
  CLUS_1             0              48
  CLUS_2             4             105
  CLUS_3             4             126
  CLUS_4             0             101
  CLUS_5             0              92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1247) Variable = TCERG1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCERG1 MUTATED        1      1      0     10
  TCERG1 WILD-TYPE    134     91    172    166
D1247V1, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1               91
  CLUS_3              0              172
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TCERG1 MUTATED        7      0      3
  TCERG1 WILD-TYPE    208    155    159
D1247V2, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              7              208
  CLUS_2              0              155
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  TCERG1 MUTATED        4      4      0      3
  TCERG1 WILD-TYPE    131    120    125     57
D1247V3, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              4              131
  CLUS_2              4              120
  CLUS_3              0              125
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TCERG1 MUTATED        8      1      2
  TCERG1 WILD-TYPE    245    101     87
D1247V4, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              8              245
  CLUS_2              1              101
  CLUS_3              2               87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TCERG1 MUTATED        3      6      3
  TCERG1 WILD-TYPE    161    241    140
D1247V5, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              3              161
  CLUS_2              6              241
  CLUS_3              3              140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCERG1 MUTATED        2      2      4      1      3
  TCERG1 WILD-TYPE    119    102     87    120    114
D1247V6, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              2              119
  CLUS_2              2              102
  CLUS_3              4               87
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  TCERG1 MUTATED        1     10      1
  TCERG1 WILD-TYPE    158    241    164
D1247V7, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              1              158
  CLUS_2             10              241
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCERG1 MUTATED        1      3      8      0      0
  TCERG1 WILD-TYPE    117    128    143     94     81
D1247V8, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              3              128
  CLUS_3              8              143
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCERG1 MUTATED        0      3      1      1      5
  TCERG1 WILD-TYPE    118    133    114     39     66
D1247V9, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              3              133
  CLUS_3              1              114
  CLUS_4              1               39
  CLUS_5              5               66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  TCERG1 MUTATED        1      3      6      0      0
  TCERG1 WILD-TYPE     47    106    124    101     92
D1247V10, multiclass
        clus
vv       TCERG1 MUTATED TCERG1 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              6              124
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1248) Variable = SETBP1 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETBP1 MUTATED        7      5     11     24
  SETBP1 WILD-TYPE    128     87    161    152
D1248V1, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              7              128
  CLUS_2              5               87
  CLUS_3             11              161
  CLUS_4             24              152
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETBP1 MUTATED       30      5      7
  SETBP1 WILD-TYPE    185    150    155
D1248V2, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1             30              185
  CLUS_2              5              150
  CLUS_3              7              155
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SETBP1 MUTATED       14     10      8      3
  SETBP1 WILD-TYPE    121    114    117     57
D1248V3, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1             14              121
  CLUS_2             10              114
  CLUS_3              8              117
  CLUS_4              3               57
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETBP1 MUTATED       21      8      6
  SETBP1 WILD-TYPE    232     94     83
D1248V4, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1             21              232
  CLUS_2              8               94
  CLUS_3              6               83
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETBP1 MUTATED        6     30      7
  SETBP1 WILD-TYPE    158    217    136
D1248V5, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              6              158
  CLUS_2             30              217
  CLUS_3              7              136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETBP1 MUTATED        6     11     14      5      7
  SETBP1 WILD-TYPE    115     93     77    116    110
D1248V6, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              6              115
  CLUS_2             11               93
  CLUS_3             14               77
  CLUS_4              5              116
  CLUS_5              7              110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  SETBP1 MUTATED        5     31     11
  SETBP1 WILD-TYPE    154    220    154
D1248V7, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              5              154
  CLUS_2             31              220
  CLUS_3             11              154
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETBP1 MUTATED        6     21     13      4      3
  SETBP1 WILD-TYPE    112    110    138     90     78
D1248V8, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              6              112
  CLUS_2             21              110
  CLUS_3             13              138
  CLUS_4              4               90
  CLUS_5              3               78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETBP1 MUTATED        4     22      6      3      6
  SETBP1 WILD-TYPE    114    114    109     37     65
D1248V9, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              4              114
  CLUS_2             22              114
  CLUS_3              6              109
  CLUS_4              3               37
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SETBP1 MUTATED        5     17     10      5      4
  SETBP1 WILD-TYPE     43     92    120     96     88
D1248V10, multiclass
        clus
vv       SETBP1 MUTATED SETBP1 WILD-TYPE
  CLUS_1              5               43
  CLUS_2             17               92
  CLUS_3             10              120
  CLUS_4              5               96
  CLUS_5              4               88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1249) Variable = WEE1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WEE1 MUTATED        0      1      2      4
  WEE1 WILD-TYPE    135     91    170    172
D1249V1, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            1             91
  CLUS_3            2            170
  CLUS_4            4            172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WEE1 MUTATED        5      2      0
  WEE1 WILD-TYPE    210    153    162
D1249V2, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            5            210
  CLUS_2            2            153
  CLUS_3            0            162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  WEE1 MUTATED        3      3      1      0
  WEE1 WILD-TYPE    132    121    124     60
D1249V3, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            3            132
  CLUS_2            3            121
  CLUS_3            1            124
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WEE1 MUTATED        4      2      1
  WEE1 WILD-TYPE    249    100     88
D1249V4, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            2            100
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WEE1 MUTATED        1      3      1
  WEE1 WILD-TYPE    163    244    142
D1249V5, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            3            244
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WEE1 MUTATED        0      1      2      1      1
  WEE1 WILD-TYPE    121    103     89    120    116
D1249V6, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            1            103
  CLUS_3            2             89
  CLUS_4            1            120
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  WEE1 MUTATED        2      3      2
  WEE1 WILD-TYPE    157    248    163
D1249V7, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            2            157
  CLUS_2            3            248
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WEE1 MUTATED        1      3      1      1      1
  WEE1 WILD-TYPE    117    128    150     93     80
D1249V8, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            3            128
  CLUS_3            1            150
  CLUS_4            1             93
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WEE1 MUTATED        2      1      2      0      1
  WEE1 WILD-TYPE    116    135    113     40     70
D1249V9, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            1            135
  CLUS_3            2            113
  CLUS_4            0             40
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  WEE1 MUTATED        0      2      1      2      1
  WEE1 WILD-TYPE     48    107    129     99     91
D1249V10, multiclass
        clus
vv       WEE1 MUTATED WEE1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            2            107
  CLUS_3            1            129
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1250) Variable = IGSF21 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGSF21 MUTATED        1      0      1      3
  IGSF21 WILD-TYPE    134     92    171    173
D1250V1, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              0               92
  CLUS_3              1              171
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGSF21 MUTATED        3      1      1
  IGSF21 WILD-TYPE    212    154    161
D1250V2, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              1              154
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IGSF21 MUTATED        1      1      1      1
  IGSF21 WILD-TYPE    134    123    124     59
D1250V3, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              1              123
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGSF21 MUTATED        2      1      1
  IGSF21 WILD-TYPE    251    101     88
D1250V4, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              2              251
  CLUS_2              1              101
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGSF21 MUTATED        1      3      1
  IGSF21 WILD-TYPE    163    244    142
D1250V5, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              3              244
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGSF21 MUTATED        1      2      1      0      1
  IGSF21 WILD-TYPE    120    102     90    121    116
D1250V6, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              1              120
  CLUS_2              2              102
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              1              116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  IGSF21 MUTATED        0      3      2
  IGSF21 WILD-TYPE    159    248    163
D1250V7, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              3              248
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGSF21 MUTATED        0      1      4      0      0
  IGSF21 WILD-TYPE    118    130    147     94     81
D1250V8, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              130
  CLUS_3              4              147
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGSF21 MUTATED        0      2      1      0      2
  IGSF21 WILD-TYPE    118    134    114     40     69
D1250V9, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              1              114
  CLUS_4              0               40
  CLUS_5              2               69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IGSF21 MUTATED        0      1      4      0      0
  IGSF21 WILD-TYPE     48    108    126    101     92
D1250V10, multiclass
        clus
vv       IGSF21 MUTATED IGSF21 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              4              126
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1251) Variable = IBTK MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IBTK MUTATED        1      0      5     16
  IBTK WILD-TYPE    134     92    167    160
D1251V1, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            1            134
  CLUS_2            0             92
  CLUS_3            5            167
  CLUS_4           16            160
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IBTK MUTATED       10      3      5
  IBTK WILD-TYPE    205    152    157
D1251V2, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1           10            205
  CLUS_2            3            152
  CLUS_3            5            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  IBTK MUTATED        7     11      3      0
  IBTK WILD-TYPE    128    113    122     60
D1251V3, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            7            128
  CLUS_2           11            113
  CLUS_3            3            122
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IBTK MUTATED       11      7      3
  IBTK WILD-TYPE    242     95     86
D1251V4, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1           11            242
  CLUS_2            7             95
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IBTK MUTATED        7      4      9
  IBTK WILD-TYPE    157    243    134
D1251V5, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            7            157
  CLUS_2            4            243
  CLUS_3            9            134
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IBTK MUTATED        0      3      6      4      7
  IBTK WILD-TYPE    121    101     85    117    110
D1251V6, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            6             85
  CLUS_4            4            117
  CLUS_5            7            110
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  IBTK MUTATED        4     11      8
  IBTK WILD-TYPE    155    240    157
D1251V7, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            4            155
  CLUS_2           11            240
  CLUS_3            8            157
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IBTK MUTATED        1      6      9      4      3
  IBTK WILD-TYPE    117    125    142     90     78
D1251V8, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            125
  CLUS_3            9            142
  CLUS_4            4             90
  CLUS_5            3             78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IBTK MUTATED        3      3      4      1      7
  IBTK WILD-TYPE    115    133    111     39     64
D1251V9, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            3            115
  CLUS_2            3            133
  CLUS_3            4            111
  CLUS_4            1             39
  CLUS_5            7             64
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  IBTK MUTATED        1      4      7      2      4
  IBTK WILD-TYPE     47    105    123     99     88
D1251V10, multiclass
        clus
vv       IBTK MUTATED IBTK WILD-TYPE
  CLUS_1            1             47
  CLUS_2            4            105
  CLUS_3            7            123
  CLUS_4            2             99
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1252) Variable = EEA1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEA1 MUTATED        1      1      3     11
  EEA1 WILD-TYPE    134     91    169    165
D1252V1, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            3            169
  CLUS_4           11            165
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EEA1 MUTATED       10      1      4
  EEA1 WILD-TYPE    205    154    158
D1252V2, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1           10            205
  CLUS_2            1            154
  CLUS_3            4            158
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EEA1 MUTATED        4      6      2      0
  EEA1 WILD-TYPE    131    118    123     60
D1252V3, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            6            118
  CLUS_3            2            123
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EEA1 MUTATED        8      1      3
  EEA1 WILD-TYPE    245    101     86
D1252V4, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            8            245
  CLUS_2            1            101
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EEA1 MUTATED        2      8      4
  EEA1 WILD-TYPE    162    239    139
D1252V5, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            4            139
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEA1 MUTATED        0      3      7      1      3
  EEA1 WILD-TYPE    121    101     84    120    114
D1252V6, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            3            101
  CLUS_3            7             84
  CLUS_4            1            120
  CLUS_5            3            114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EEA1 MUTATED        1     13      2
  EEA1 WILD-TYPE    158    238    163
D1252V7, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2           13            238
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEA1 MUTATED        0      6      7      1      2
  EEA1 WILD-TYPE    118    125    144     93     79
D1252V8, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            0            118
  CLUS_2            6            125
  CLUS_3            7            144
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEA1 MUTATED        1      6      1      1      4
  EEA1 WILD-TYPE    117    130    114     39     67
D1252V9, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            6            130
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EEA1 MUTATED        1      3      6      2      1
  EEA1 WILD-TYPE     47    106    124     99     91
D1252V10, multiclass
        clus
vv       EEA1 MUTATED EEA1 WILD-TYPE
  CLUS_1            1             47
  CLUS_2            3            106
  CLUS_3            6            124
  CLUS_4            2             99
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1253) Variable = PBX2 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PBX2 MUTATED        2      2      0      7
  PBX2 WILD-TYPE    133     90    172    169
D1253V1, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            2             90
  CLUS_3            0            172
  CLUS_4            7            169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PBX2 MUTATED        6      0      3
  PBX2 WILD-TYPE    209    155    159
D1253V2, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            6            209
  CLUS_2            0            155
  CLUS_3            3            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PBX2 MUTATED        5      3      2      1
  PBX2 WILD-TYPE    130    121    123     59
D1253V3, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            5            130
  CLUS_2            3            121
  CLUS_3            2            123
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PBX2 MUTATED        7      2      2
  PBX2 WILD-TYPE    246    100     87
D1253V4, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            7            246
  CLUS_2            2            100
  CLUS_3            2             87
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PBX2 MUTATED        1      5      5
  PBX2 WILD-TYPE    163    242    138
D1253V5, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            5            242
  CLUS_3            5            138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBX2 MUTATED        1      2      3      1      4
  PBX2 WILD-TYPE    120    102     88    120    113
D1253V6, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            2            102
  CLUS_3            3             88
  CLUS_4            1            120
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PBX2 MUTATED        1      8      2
  PBX2 WILD-TYPE    158    243    163
D1253V7, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            8            243
  CLUS_3            2            163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBX2 MUTATED        1      4      5      0      1
  PBX2 WILD-TYPE    117    127    146     94     80
D1253V8, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            0             94
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBX2 MUTATED        1      1      1      2      3
  PBX2 WILD-TYPE    117    135    114     38     68
D1253V9, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            1            135
  CLUS_3            1            114
  CLUS_4            2             38
  CLUS_5            3             68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PBX2 MUTATED        0      3      2      3      0
  PBX2 WILD-TYPE     48    106    128     98     92
D1253V10, multiclass
        clus
vv       PBX2 MUTATED PBX2 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            3            106
  CLUS_3            2            128
  CLUS_4            3             98
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1254) Variable = C2ORF67 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2ORF67 MUTATED        2      0      4     12
  C2ORF67 WILD-TYPE    133     92    168    164
D1254V1, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               2               133
  CLUS_2               0                92
  CLUS_3               4               168
  CLUS_4              12               164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF67 MUTATED       10      2      3
  C2ORF67 WILD-TYPE    205    153    159
D1254V2, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1              10               205
  CLUS_2               2               153
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  C2ORF67 MUTATED        8      8      0      0
  C2ORF67 WILD-TYPE    127    116    125     60
D1254V3, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               8               127
  CLUS_2               8               116
  CLUS_3               0               125
  CLUS_4               0                60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF67 MUTATED        9      7      0
  C2ORF67 WILD-TYPE    244     95     89
D1254V4, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               9               244
  CLUS_2               7                95
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF67 MUTATED        2      9      7
  C2ORF67 WILD-TYPE    162    238    136
D1254V5, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               2               162
  CLUS_2               9               238
  CLUS_3               7               136
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF67 MUTATED        1      2      9      1      5
  C2ORF67 WILD-TYPE    120    102     82    120    112
D1254V6, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               1               120
  CLUS_2               2               102
  CLUS_3               9                82
  CLUS_4               1               120
  CLUS_5               5               112
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  C2ORF67 MUTATED        1     13      4
  C2ORF67 WILD-TYPE    158    238    161
D1254V7, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               1               158
  CLUS_2              13               238
  CLUS_3               4               161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF67 MUTATED        2      5      9      1      1
  C2ORF67 WILD-TYPE    116    126    142     93     80
D1254V8, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               5               126
  CLUS_3               9               142
  CLUS_4               1                93
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF67 MUTATED        2      2      2      3      6
  C2ORF67 WILD-TYPE    116    134    113     37     65
D1254V9, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               2               116
  CLUS_2               2               134
  CLUS_3               2               113
  CLUS_4               3                37
  CLUS_5               6                65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  C2ORF67 MUTATED        2      3      7      2      1
  C2ORF67 WILD-TYPE     46    106    123     99     91
D1254V10, multiclass
        clus
vv       C2ORF67 MUTATED C2ORF67 WILD-TYPE
  CLUS_1               2                46
  CLUS_2               3               106
  CLUS_3               7               123
  CLUS_4               2                99
  CLUS_5               1                91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1255) Variable = ZNF740 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF740 MUTATED        0      0      0      3
  ZNF740 WILD-TYPE    135     92    172    173
D1255V1, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              3              173
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF740 MUTATED        3      0      0
  ZNF740 WILD-TYPE    212    155    162
D1255V2, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              3              212
  CLUS_2              0              155
  CLUS_3              0              162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ZNF740 MUTATED        0      1      0      0
  ZNF740 WILD-TYPE    135    123    125     60
D1255V3, multiclass
[1] "Remove cluster labels:" "ZNF740 MUTATED"        
clus
  ZNF740 MUTATED ZNF740 WILD-TYPE 
               1              443 
      TCGA-2H-A9GF       TCGA-2H-A9GI       TCGA-2H-A9GL       TCGA-2H-A9GQ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-2H-A9GR       TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-B7-A5TJ       TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-4183 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4184       TCGA-BR-4187       TCGA-BR-4188       TCGA-BR-4191 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4201       TCGA-BR-4253       TCGA-BR-4255       TCGA-BR-4256 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4257       TCGA-BR-4267       TCGA-BR-4279       TCGA-BR-4280 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4292       TCGA-BR-4294       TCGA-BR-4357       TCGA-BR-4361 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4362       TCGA-BR-4363       TCGA-BR-4366       TCGA-BR-4368 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4369       TCGA-BR-4370       TCGA-BR-4371       TCGA-BR-6452 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6453       TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6457       TCGA-BR-6458       TCGA-BR-6564       TCGA-BR-6565 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7715       TCGA-BR-7716 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7722       TCGA-BR-7723       TCGA-BR-7851 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-7901       TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8058       TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8080 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8081       TCGA-BR-8284       TCGA-BR-8285       TCGA-BR-8286 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8289       TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8360       TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8365       TCGA-BR-8366       TCGA-BR-8367       TCGA-BR-8368 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371       TCGA-BR-8372 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8380       TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8483       TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8588       TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8592 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678       TCGA-BR-8679 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683       TCGA-BR-8686 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A44U 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2       TCGA-BR-A4J4 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7       TCGA-BR-A4J8 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF       TCGA-BR-A4QI 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8528       TCGA-CD-8529 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-8530       TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-8534       TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-A487       TCGA-CD-A489       TCGA-CD-A48A       TCGA-CD-A48C 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI       TCGA-CD-A4MJ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4300       TCGA-CG-4301       TCGA-CG-4304       TCGA-CG-4305 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4306       TCGA-CG-4436       TCGA-CG-4437       TCGA-CG-4438 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4442       TCGA-CG-4443       TCGA-CG-4444       TCGA-CG-4449 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4455       TCGA-CG-4460       TCGA-CG-4465       TCGA-CG-4466 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4469       TCGA-CG-4474       TCGA-CG-4475       TCGA-CG-4476 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4477       TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5719       TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5723 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6527 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8578 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV       TCGA-D7-A4YX 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6EV       TCGA-D7-A6EX 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A748 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-EQ-8122       TCGA-EQ-A4SO       TCGA-F1-6177       TCGA-F1-6874 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-F1-6875       TCGA-F1-A448       TCGA-F1-A72C       TCGA-FP-7916 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-FP-7998       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7133 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HF-A5NB       TCGA-HJ-7597 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8608       TCGA-HU-8610       TCGA-HU-A4GF 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-A4GQ       TCGA-HU-A4GT       TCGA-HU-A4GU       TCGA-HU-A4GX 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H3       TCGA-HU-A4H4 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4HD       TCGA-IC-A6RE       TCGA-IC-A6RF 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A3I8       TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A3YB       TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A4QT       TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A5S3       TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A8O2 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RL 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RO       TCGA-IN-A6RR       TCGA-IN-A6RS 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-A7NR       TCGA-IN-A7NT       TCGA-IN-A7NU       TCGA-IN-AB1V 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-AB1X       TCGA-IP-7968       TCGA-JY-A6F8       TCGA-JY-A6FA 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-JY-A6FB       TCGA-JY-A6FD       TCGA-JY-A6FE       TCGA-JY-A6FG 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93E       TCGA-JY-A93F       TCGA-KB-A6F5 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-KB-A93G       TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OJ       TCGA-L5-A4ON       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88W       TCGA-L5-A891 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NQ       TCGA-L5-A8NS 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A8NT       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A49X       TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A4A3       TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HW 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-RD-A7BS       TCGA-RD-A7BT 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-RD-A7BW       TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-RD-A8N0       TCGA-RD-A8N1       TCGA-RE-A7BO       TCGA-S8-A6BV 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-S8-A6BW       TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-VQ-A8DL 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8E2       TCGA-VQ-A8E7 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A8P2       TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A8PM       TCGA-VQ-A8PQ       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-AA64       TCGA-VQ-AA69       TCGA-VQ-AA6A 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-AA6B       TCGA-VQ-AA6F       TCGA-VQ-AA6G       TCGA-VQ-AA6I 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-AA6K       TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VR-A8Q7       TCGA-VR-AA4D       TCGA-VR-AA7B       TCGA-X8-AAAR 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-Z6-A8JD       TCGA-Z6-A8JE 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-Z6-A9VB       TCGA-Z6-AAPN       TCGA-ZA-A8F6 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF740 MUTATED        0      1      0
  ZNF740 WILD-TYPE    253    101     89
D1255V4, multiclass
[1] "Remove cluster labels:" "ZNF740 MUTATED"        
clus
  ZNF740 MUTATED ZNF740 WILD-TYPE 
               1              443 
      TCGA-2H-A9GF       TCGA-2H-A9GI       TCGA-2H-A9GL       TCGA-2H-A9GQ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-2H-A9GR       TCGA-B7-5816       TCGA-B7-5818       TCGA-B7-A5TI 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-B7-A5TJ       TCGA-B7-A5TK       TCGA-B7-A5TN       TCGA-BR-4183 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4184       TCGA-BR-4187       TCGA-BR-4188       TCGA-BR-4191 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4201       TCGA-BR-4253       TCGA-BR-4255       TCGA-BR-4256 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4257       TCGA-BR-4267       TCGA-BR-4279       TCGA-BR-4280 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4292       TCGA-BR-4294       TCGA-BR-4357       TCGA-BR-4361 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4362       TCGA-BR-4363       TCGA-BR-4366       TCGA-BR-4368 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-4369       TCGA-BR-4370       TCGA-BR-4371       TCGA-BR-6452 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6453       TCGA-BR-6454       TCGA-BR-6455       TCGA-BR-6456 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6457       TCGA-BR-6458       TCGA-BR-6564       TCGA-BR-6565 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6566       TCGA-BR-6705       TCGA-BR-6706       TCGA-BR-6707 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6709       TCGA-BR-6710       TCGA-BR-6801       TCGA-BR-6802 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-6803       TCGA-BR-6852       TCGA-BR-7196       TCGA-BR-7197 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-7703       TCGA-BR-7704       TCGA-BR-7715       TCGA-BR-7716 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-7717       TCGA-BR-7722       TCGA-BR-7723       TCGA-BR-7851 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-7901       TCGA-BR-7957       TCGA-BR-7958       TCGA-BR-7959 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8058       TCGA-BR-8059       TCGA-BR-8060       TCGA-BR-8080 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8081       TCGA-BR-8284       TCGA-BR-8285       TCGA-BR-8286 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8289       TCGA-BR-8291       TCGA-BR-8295       TCGA-BR-8297 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8360       TCGA-BR-8361       TCGA-BR-8363       TCGA-BR-8364 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8365       TCGA-BR-8366       TCGA-BR-8367       TCGA-BR-8368 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8369       TCGA-BR-8370       TCGA-BR-8371       TCGA-BR-8372 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8380       TCGA-BR-8381       TCGA-BR-8382       TCGA-BR-8384 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8483       TCGA-BR-8484       TCGA-BR-8485       TCGA-BR-8486 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8588       TCGA-BR-8589       TCGA-BR-8590       TCGA-BR-8592 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8676       TCGA-BR-8677       TCGA-BR-8678       TCGA-BR-8679 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8680       TCGA-BR-8682       TCGA-BR-8683       TCGA-BR-8686 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-8687       TCGA-BR-8690       TCGA-BR-A44T       TCGA-BR-A44U 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A452       TCGA-BR-A453       TCGA-BR-A4CQ       TCGA-BR-A4CR 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4CS       TCGA-BR-A4IU       TCGA-BR-A4IV       TCGA-BR-A4IY 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4IZ       TCGA-BR-A4J1       TCGA-BR-A4J2       TCGA-BR-A4J4 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4J5       TCGA-BR-A4J6       TCGA-BR-A4J7       TCGA-BR-A4J8 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4PD       TCGA-BR-A4PE       TCGA-BR-A4PF       TCGA-BR-A4QI 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-BR-A4QL       TCGA-BR-A4QM       TCGA-CD-5798       TCGA-CD-5799 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-5800       TCGA-CD-5801       TCGA-CD-5802       TCGA-CD-5803 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-5804       TCGA-CD-5813       TCGA-CD-8524       TCGA-CD-8525 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-8526       TCGA-CD-8527       TCGA-CD-8528       TCGA-CD-8529 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-8530       TCGA-CD-8531       TCGA-CD-8532       TCGA-CD-8533 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-8534       TCGA-CD-8535       TCGA-CD-8536       TCGA-CD-A486 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-A487       TCGA-CD-A489       TCGA-CD-A48A       TCGA-CD-A48C 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CD-A4MG       TCGA-CD-A4MH       TCGA-CD-A4MI       TCGA-CD-A4MJ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4300       TCGA-CG-4301       TCGA-CG-4304       TCGA-CG-4305 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4306       TCGA-CG-4436       TCGA-CG-4437       TCGA-CG-4438 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4442       TCGA-CG-4443       TCGA-CG-4444       TCGA-CG-4449 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4455       TCGA-CG-4460       TCGA-CG-4465       TCGA-CG-4466 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4469       TCGA-CG-4474       TCGA-CG-4475       TCGA-CG-4476 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-4477       TCGA-CG-5716       TCGA-CG-5717       TCGA-CG-5718 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5719       TCGA-CG-5720       TCGA-CG-5721       TCGA-CG-5723 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5724       TCGA-CG-5725       TCGA-CG-5726       TCGA-CG-5727 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5728       TCGA-CG-5730       TCGA-CG-5732       TCGA-CG-5733 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-CG-5734       TCGA-D7-5577       TCGA-D7-5578       TCGA-D7-5579 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6518       TCGA-D7-6519       TCGA-D7-6520       TCGA-D7-6521 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6522       TCGA-D7-6524       TCGA-D7-6525       TCGA-D7-6527 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6528       TCGA-D7-6815       TCGA-D7-6817       TCGA-D7-6818 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-6820       TCGA-D7-6822       TCGA-D7-8570       TCGA-D7-8572 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-8573       TCGA-D7-8574       TCGA-D7-8575       TCGA-D7-8578 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-A4YT       TCGA-D7-A4YU       TCGA-D7-A4YV       TCGA-D7-A4YX 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-A4YY       TCGA-D7-A4Z0       TCGA-D7-A6EV       TCGA-D7-A6EX 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-D7-A6EY       TCGA-D7-A6EZ       TCGA-D7-A6F0       TCGA-D7-A748 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-EQ-8122       TCGA-EQ-A4SO       TCGA-F1-6177       TCGA-F1-6874 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-F1-6875       TCGA-F1-A448       TCGA-F1-A72C       TCGA-FP-7916 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-FP-7998       TCGA-HF-7131       TCGA-HF-7132       TCGA-HF-7133 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HF-7134       TCGA-HF-7136       TCGA-HF-A5NB       TCGA-HJ-7597 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-8602       TCGA-HU-8608       TCGA-HU-8610       TCGA-HU-A4GF 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-A4GQ       TCGA-HU-A4GT       TCGA-HU-A4GU       TCGA-HU-A4GX 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-A4GY       TCGA-HU-A4H2       TCGA-HU-A4H3       TCGA-HU-A4H4 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-HU-A4H5       TCGA-HU-A4HD       TCGA-IC-A6RE       TCGA-IC-A6RF 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A3I8       TCGA-IG-A3QL       TCGA-IG-A3Y9       TCGA-IG-A3YA 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A3YB       TCGA-IG-A3YC       TCGA-IG-A4P3       TCGA-IG-A4QS 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A4QT       TCGA-IG-A50L       TCGA-IG-A51D       TCGA-IG-A5B8 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A5S3       TCGA-IG-A625       TCGA-IG-A6QS       TCGA-IG-A8O2 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IG-A97H       TCGA-IG-A97I       TCGA-IN-7806       TCGA-IN-7808 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-8462       TCGA-IN-8663       TCGA-IN-A6RI       TCGA-IN-A6RL 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-A6RN       TCGA-IN-A6RO       TCGA-IN-A6RR       TCGA-IN-A6RS 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-A7NR       TCGA-IN-A7NT       TCGA-IN-A7NU       TCGA-IN-AB1V 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-IN-AB1X       TCGA-IP-7968       TCGA-JY-A6F8       TCGA-JY-A6FA 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-JY-A6FB       TCGA-JY-A6FD       TCGA-JY-A6FE       TCGA-JY-A6FG 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-JY-A939       TCGA-JY-A93E       TCGA-JY-A93F       TCGA-KB-A6F5 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-KB-A93G       TCGA-L5-A43C       TCGA-L5-A43E       TCGA-L5-A43H 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A43I       TCGA-L5-A43J       TCGA-L5-A43M       TCGA-L5-A4OE 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OF       TCGA-L5-A4OG       TCGA-L5-A4OH       TCGA-L5-A4OI 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OJ       TCGA-L5-A4ON       TCGA-L5-A4OP       TCGA-L5-A4OQ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OR       TCGA-L5-A4OS       TCGA-L5-A4OT       TCGA-L5-A4OU 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A4OW       TCGA-L5-A4OX       TCGA-L5-A88W       TCGA-L5-A891 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A8NE       TCGA-L5-A8NF       TCGA-L5-A8NI       TCGA-L5-A8NJ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A8NK       TCGA-L5-A8NL       TCGA-L5-A8NQ       TCGA-L5-A8NS 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L5-A8NT       TCGA-L5-A8NV       TCGA-L5-A8NW       TCGA-L7-A56G 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-L7-A6VZ       TCGA-LN-A49K       TCGA-LN-A49L       TCGA-LN-A49M 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A49N       TCGA-LN-A49O       TCGA-LN-A49P       TCGA-LN-A49R 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A49S       TCGA-LN-A49U       TCGA-LN-A49V       TCGA-LN-A49W 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A49X       TCGA-LN-A49Y       TCGA-LN-A4A1       TCGA-LN-A4A2 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A4A3       TCGA-LN-A4A4       TCGA-LN-A4A5       TCGA-LN-A4A6 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A4A8       TCGA-LN-A4A9       TCGA-LN-A4MQ       TCGA-LN-A4MR 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A5U5       TCGA-LN-A5U6       TCGA-LN-A5U7       TCGA-LN-A7HW 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A7HX       TCGA-LN-A7HY       TCGA-LN-A7HZ       TCGA-LN-A8HZ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A8I0       TCGA-LN-A8I1       TCGA-LN-A9FO       TCGA-LN-A9FP 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-LN-A9FQ       TCGA-LN-A9FR       TCGA-M9-A5M8       TCGA-MX-A5UG 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-Q9-A6FU       TCGA-Q9-A6FW       TCGA-RD-A7BS       TCGA-RD-A7BT 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-RD-A7BW       TCGA-RD-A7C1       TCGA-RD-A8MV       TCGA-RD-A8MW 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-RD-A8N0       TCGA-RD-A8N1       TCGA-RE-A7BO       TCGA-S8-A6BV 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-S8-A6BW       TCGA-SW-A7EA       TCGA-SW-A7EB       TCGA-VQ-A8DL 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A8DT       TCGA-VQ-A8DU       TCGA-VQ-A8E2       TCGA-VQ-A8E7 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A8P2       TCGA-VQ-A8P3       TCGA-VQ-A8PE       TCGA-VQ-A8PK 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A8PM       TCGA-VQ-A8PQ       TCGA-VQ-A91U       TCGA-VQ-A91V 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-A92D       TCGA-VQ-AA64       TCGA-VQ-AA69       TCGA-VQ-AA6A 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-AA6B       TCGA-VQ-AA6F       TCGA-VQ-AA6G       TCGA-VQ-AA6I 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VQ-AA6K       TCGA-VR-A8EO       TCGA-VR-A8EP       TCGA-VR-A8EQ 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-VR-A8Q7       TCGA-VR-AA4D       TCGA-VR-AA7B       TCGA-X8-AAAR 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-XP-A8T6       TCGA-XP-A8T7       TCGA-Z6-A8JD       TCGA-Z6-A8JE 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
      TCGA-Z6-A9VB       TCGA-Z6-AAPN       TCGA-ZA-A8F6 
"ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" "ZNF740 WILD-TYPE" 
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF740 MUTATED        0      3      0
  ZNF740 WILD-TYPE    164    244    143
D1255V5, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              0              164
  CLUS_2              3              244
  CLUS_3              0              143
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF740 MUTATED        0      2      1      0      0
  ZNF740 WILD-TYPE    121    102     90    121    117
D1255V6, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              1               90
  CLUS_4              0              121
  CLUS_5              0              117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ZNF740 MUTATED        0      1      2
  ZNF740 WILD-TYPE    159    250    163
D1255V7, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              1              250
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF740 MUTATED        1      1      1      0      0
  ZNF740 WILD-TYPE    117    130    150     94     81
D1255V8, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              1              117
  CLUS_2              1              130
  CLUS_3              1              150
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF740 MUTATED        0      1      2      0      0
  ZNF740 WILD-TYPE    118    135    113     40     71
D1255V9, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              1              135
  CLUS_3              2              113
  CLUS_4              0               40
  CLUS_5              0               71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ZNF740 MUTATED        0      1      1      1      0
  ZNF740 WILD-TYPE     48    108    129    100     92
D1255V10, multiclass
        clus
vv       ZNF740 MUTATED ZNF740 WILD-TYPE
  CLUS_1              0               48
  CLUS_2              1              108
  CLUS_3              1              129
  CLUS_4              1              100
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1256) Variable = SLA MUTATION ANALYSIS
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLA MUTATED        1      1      1      6
  SLA WILD-TYPE    134     91    171    170
D1256V1, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           1           134
  CLUS_2           1            91
  CLUS_3           1           171
  CLUS_4           6           170
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SLA MUTATED        8      0      1
  SLA WILD-TYPE    207    155    161
D1256V2, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           8           207
  CLUS_2           0           155
  CLUS_3           1           161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4
  SLA MUTATED        2      2      1      1
  SLA WILD-TYPE    133    122    124     59
D1256V3, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           2           133
  CLUS_2           2           122
  CLUS_3           1           124
  CLUS_4           1            59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SLA MUTATED        5      0      1
  SLA WILD-TYPE    248    102     88
D1256V4, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           5           248
  CLUS_2           0           102
  CLUS_3           1            88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SLA MUTATED        1      6      1
  SLA WILD-TYPE    163    241    142
D1256V5, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           1           163
  CLUS_2           6           241
  CLUS_3           1           142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLA MUTATED        0      2      4      1      1
  SLA WILD-TYPE    121    102     87    120    116
D1256V6, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           0           121
  CLUS_2           2           102
  CLUS_3           4            87
  CLUS_4           1           120
  CLUS_5           1           116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3
  SLA MUTATED        1      6      2
  SLA WILD-TYPE    158    245    163
D1256V7, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           1           158
  CLUS_2           6           245
  CLUS_3           2           163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLA MUTATED        0      6      1      0      2
  SLA WILD-TYPE    118    125    150     94     79
D1256V8, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           0           118
  CLUS_2           6           125
  CLUS_3           1           150
  CLUS_4           0            94
  CLUS_5           2            79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLA MUTATED        0      6      1      0      2
  SLA WILD-TYPE    118    130    114     40     69
D1256V9, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           0           118
  CLUS_2           6           130
  CLUS_3           1           114
  CLUS_4           0            40
  CLUS_5           2            69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
               vv
clus            CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  SLA MUTATED        0      5      3      1      0
  SLA WILD-TYPE     48    104    127    100     92
D1256V10, multiclass
        clus
vv       SLA MUTATED SLA WILD-TYPE
  CLUS_1           0            48
  CLUS_2           5           104
  CLUS_3           3           127
  CLUS_4           1           100
  CLUS_5           0            92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1257) Variable = CC2D2A MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CC2D2A MUTATED        0      3      2     12
  CC2D2A WILD-TYPE    135     89    170    164
D1257V1, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              0              135
  CLUS_2              3               89
  CLUS_3              2              170
  CLUS_4             12              164
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CC2D2A MUTATED       10      2      3
  CC2D2A WILD-TYPE    205    153    159
D1257V2, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1             10              205
  CLUS_2              2              153
  CLUS_3              3              159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CC2D2A MUTATED        5      7      1      1
  CC2D2A WILD-TYPE    130    117    124     59
D1257V3, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              5              130
  CLUS_2              7              117
  CLUS_3              1              124
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CC2D2A MUTATED        9      4      1
  CC2D2A WILD-TYPE    244     98     88
D1257V4, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              9              244
  CLUS_2              4               98
  CLUS_3              1               88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CC2D2A MUTATED        3     11      2
  CC2D2A WILD-TYPE    161    236    141
D1257V5, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              3              161
  CLUS_2             11              236
  CLUS_3              2              141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CC2D2A MUTATED        2      3      7      1      3
  CC2D2A WILD-TYPE    119    101     84    120    114
D1257V6, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              2              119
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              1              120
  CLUS_5              3              114
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  CC2D2A MUTATED        2     11      4
  CC2D2A WILD-TYPE    157    240    161
D1257V7, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              2              157
  CLUS_2             11              240
  CLUS_3              4              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CC2D2A MUTATED        2      8      5      1      1
  CC2D2A WILD-TYPE    116    123    146     93     80
D1257V8, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              2              116
  CLUS_2              8              123
  CLUS_3              5              146
  CLUS_4              1               93
  CLUS_5              1               80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CC2D2A MUTATED        2      6      2      1      3
  CC2D2A WILD-TYPE    116    130    113     39     68
D1257V9, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              130
  CLUS_3              2              113
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CC2D2A MUTATED        2      6      4      1      1
  CC2D2A WILD-TYPE     46    103    126    100     91
D1257V10, multiclass
        clus
vv       CC2D2A MUTATED CC2D2A WILD-TYPE
  CLUS_1              2               46
  CLUS_2              6              103
  CLUS_3              4              126
  CLUS_4              1              100
  CLUS_5              1               91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1258) Variable = GZF1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GZF1 MUTATED        0      2      5     14
  GZF1 WILD-TYPE    135     90    167    162
D1258V1, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            0            135
  CLUS_2            2             90
  CLUS_3            5            167
  CLUS_4           14            162
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GZF1 MUTATED       11      6      2
  GZF1 WILD-TYPE    204    149    160
D1258V2, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1           11            204
  CLUS_2            6            149
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GZF1 MUTATED        9      7      1      1
  GZF1 WILD-TYPE    126    117    124     59
D1258V3, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            9            126
  CLUS_2            7            117
  CLUS_3            1            124
  CLUS_4            1             59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GZF1 MUTATED       14      4      0
  GZF1 WILD-TYPE    239     98     89
D1258V4, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1           14            239
  CLUS_2            4             98
  CLUS_3            0             89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GZF1 MUTATED        6     10      2
  GZF1 WILD-TYPE    158    237    141
D1258V5, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            6            158
  CLUS_2           10            237
  CLUS_3            2            141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GZF1 MUTATED        0      4      8      5      1
  GZF1 WILD-TYPE    121    100     83    116    116
D1258V6, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            0            121
  CLUS_2            4            100
  CLUS_3            8             83
  CLUS_4            5            116
  CLUS_5            1            116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  GZF1 MUTATED        5     15      1
  GZF1 WILD-TYPE    154    236    164
D1258V7, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           15            236
  CLUS_3            1            164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GZF1 MUTATED        1      8      7      4      1
  GZF1 WILD-TYPE    117    123    144     90     80
D1258V8, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            8            123
  CLUS_3            7            144
  CLUS_4            4             90
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GZF1 MUTATED        4      9      1      1      2
  GZF1 WILD-TYPE    114    127    114     39     69
D1258V9, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            4            114
  CLUS_2            9            127
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            2             69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GZF1 MUTATED        0      9      3      1      4
  GZF1 WILD-TYPE     48    100    127    100     88
D1258V10, multiclass
        clus
vv       GZF1 MUTATED GZF1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            9            100
  CLUS_3            3            127
  CLUS_4            1            100
  CLUS_5            4             88
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1259) Variable = AGXT2L1 MUTATION ANALYSIS
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        1      1      3      5
  AGXT2L1 WILD-TYPE    134     91    169    171
D1259V1, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               1               134
  CLUS_2               1                91
  CLUS_3               3               169
  CLUS_4               5               171
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        4      2      3
  AGXT2L1 WILD-TYPE    211    153    159
D1259V2, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               4               211
  CLUS_2               2               153
  CLUS_3               3               159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4
  AGXT2L1 MUTATED        3      4      1      1
  AGXT2L1 WILD-TYPE    132    120    124     59
D1259V3, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               3               132
  CLUS_2               4               120
  CLUS_3               1               124
  CLUS_4               1                59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        8      1      0
  AGXT2L1 WILD-TYPE    245    101     89
D1259V4, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               8               245
  CLUS_2               1               101
  CLUS_3               0                89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        4      3      1
  AGXT2L1 WILD-TYPE    160    244    142
D1259V5, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               4               160
  CLUS_2               3               244
  CLUS_3               1               142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGXT2L1 MUTATED        2      2      1      2      1
  AGXT2L1 WILD-TYPE    119    102     90    119    116
D1259V6, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               2               119
  CLUS_2               2               102
  CLUS_3               1                90
  CLUS_4               2               119
  CLUS_5               1               116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3
  AGXT2L1 MUTATED        4      4      2
  AGXT2L1 WILD-TYPE    155    247    163
D1259V7, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               4               155
  CLUS_2               4               247
  CLUS_3               2               163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGXT2L1 MUTATED        3      2      2      2      1
  AGXT2L1 WILD-TYPE    115    129    149     92     80
D1259V8, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               3               115
  CLUS_2               2               129
  CLUS_3               2               149
  CLUS_4               2                92
  CLUS_5               1                80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGXT2L1 MUTATED        4      2      0      1      2
  AGXT2L1 WILD-TYPE    114    134    115     39     69
D1259V9, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               4               114
  CLUS_2               2               134
  CLUS_3               0               115
  CLUS_4               1                39
  CLUS_5               2                69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                   vv
clus                CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  AGXT2L1 MUTATED        3      1      2      1      2
  AGXT2L1 WILD-TYPE     45    108    128    100     90
D1259V10, multiclass
        clus
vv       AGXT2L1 MUTATED AGXT2L1 WILD-TYPE
  CLUS_1               3                45
  CLUS_2               1               108
  CLUS_3               2               128
  CLUS_4               1               100
  CLUS_5               2                90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1260) Variable = EPN1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPN1 MUTATED        1      1      1      9
  EPN1 WILD-TYPE    134     91    171    167
D1260V1, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            1            134
  CLUS_2            1             91
  CLUS_3            1            171
  CLUS_4            9            167
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EPN1 MUTATED        8      2      1
  EPN1 WILD-TYPE    207    153    161
D1260V2, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            8            207
  CLUS_2            2            153
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  EPN1 MUTATED        2      4      0      2
  EPN1 WILD-TYPE    133    120    125     58
D1260V3, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            4            120
  CLUS_3            0            125
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EPN1 MUTATED        4      3      1
  EPN1 WILD-TYPE    249     99     88
D1260V4, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            4            249
  CLUS_2            3             99
  CLUS_3            1             88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EPN1 MUTATED        2      8      1
  EPN1 WILD-TYPE    162    239    142
D1260V5, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            2            162
  CLUS_2            8            239
  CLUS_3            1            142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPN1 MUTATED        1      3      5      2      0
  EPN1 WILD-TYPE    120    101     86    119    117
D1260V6, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            1            120
  CLUS_2            3            101
  CLUS_3            5             86
  CLUS_4            2            119
  CLUS_5            0            117
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  EPN1 MUTATED        3      9      0
  EPN1 WILD-TYPE    156    242    165
D1260V7, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            3            156
  CLUS_2            9            242
  CLUS_3            0            165
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPN1 MUTATED        1      4      4      2      1
  EPN1 WILD-TYPE    117    127    147     92     80
D1260V8, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            4            147
  CLUS_4            2             92
  CLUS_5            1             80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPN1 MUTATED        2      5      0      0      4
  EPN1 WILD-TYPE    116    131    115     40     67
D1260V9, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            2            116
  CLUS_2            5            131
  CLUS_3            0            115
  CLUS_4            0             40
  CLUS_5            4             67
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  EPN1 MUTATED        0      4      5      0      2
  EPN1 WILD-TYPE     48    105    125    101     90
D1260V10, multiclass
        clus
vv       EPN1 MUTATED EPN1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            5            125
  CLUS_4            0            101
  CLUS_5            2             90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1261) Variable = CCT6A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCT6A MUTATED        1      0      1      7
  CCT6A WILD-TYPE    134     92    171    169
D1261V1, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             7             169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCT6A MUTATED        6      1      1
  CCT6A WILD-TYPE    209    154    161
D1261V2, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             6             209
  CLUS_2             1             154
  CLUS_3             1             161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  CCT6A MUTATED        4      2      1      0
  CCT6A WILD-TYPE    131    122    124     60
D1261V3, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             4             131
  CLUS_2             2             122
  CLUS_3             1             124
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCT6A MUTATED        6      0      1
  CCT6A WILD-TYPE    247    102     88
D1261V4, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             6             247
  CLUS_2             0             102
  CLUS_3             1              88
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCT6A MUTATED        1      4      2
  CCT6A WILD-TYPE    163    243    141
D1261V5, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             1             163
  CLUS_2             4             243
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCT6A MUTATED        0      1      3      1      2
  CCT6A WILD-TYPE    121    103     88    120    115
D1261V6, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             0             121
  CLUS_2             1             103
  CLUS_3             3              88
  CLUS_4             1             120
  CLUS_5             2             115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  CCT6A MUTATED        1      5      3
  CCT6A WILD-TYPE    158    246    162
D1261V7, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             1             158
  CLUS_2             5             246
  CLUS_3             3             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCT6A MUTATED        0      3      2      1      3
  CCT6A WILD-TYPE    118    128    149     93     78
D1261V8, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             0             118
  CLUS_2             3             128
  CLUS_3             2             149
  CLUS_4             1              93
  CLUS_5             3              78
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCT6A MUTATED        1      2      2      1      2
  CCT6A WILD-TYPE    117    134    113     39     69
D1261V9, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             2             113
  CLUS_4             1              39
  CLUS_5             2              69
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  CCT6A MUTATED        0      2      3      2      1
  CCT6A WILD-TYPE     48    107    127     99     91
D1261V10, multiclass
        clus
vv       CCT6A MUTATED CCT6A WILD-TYPE
  CLUS_1             0              48
  CLUS_2             2             107
  CLUS_3             3             127
  CLUS_4             2              99
  CLUS_5             1              91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1262) Variable = PJA1 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PJA1 MUTATED        4      1      0      8
  PJA1 WILD-TYPE    131     91    172    168
D1262V1, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            4            131
  CLUS_2            1             91
  CLUS_3            0            172
  CLUS_4            8            168
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PJA1 MUTATED        9      1      1
  PJA1 WILD-TYPE    206    154    161
D1262V2, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            9            206
  CLUS_2            1            154
  CLUS_3            1            161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PJA1 MUTATED        2      3      4      0
  PJA1 WILD-TYPE    133    121    121     60
D1262V3, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            2            133
  CLUS_2            3            121
  CLUS_3            4            121
  CLUS_4            0             60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PJA1 MUTATED        3      3      3
  PJA1 WILD-TYPE    250     99     86
D1262V4, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            3            250
  CLUS_2            3             99
  CLUS_3            3             86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PJA1 MUTATED        1      9      3
  PJA1 WILD-TYPE    163    238    140
D1262V5, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            1            163
  CLUS_2            9            238
  CLUS_3            3            140
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PJA1 MUTATED        3      3      4      1      2
  PJA1 WILD-TYPE    118    101     87    120    115
D1262V6, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            3            118
  CLUS_2            3            101
  CLUS_3            4             87
  CLUS_4            1            120
  CLUS_5            2            115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PJA1 MUTATED        1      6      6
  PJA1 WILD-TYPE    158    245    159
D1262V7, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            1            158
  CLUS_2            6            245
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PJA1 MUTATED        1      4      5      1      2
  PJA1 WILD-TYPE    117    127    146     93     79
D1262V8, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            4            127
  CLUS_3            5            146
  CLUS_4            1             93
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PJA1 MUTATED        1      5      1      1      1
  PJA1 WILD-TYPE    117    131    114     39     70
D1262V9, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            1            117
  CLUS_2            5            131
  CLUS_3            1            114
  CLUS_4            1             39
  CLUS_5            1             70
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PJA1 MUTATED        0      4      1      3      1
  PJA1 WILD-TYPE     48    105    129     98     91
D1262V10, multiclass
        clus
vv       PJA1 MUTATED PJA1 WILD-TYPE
  CLUS_1            0             48
  CLUS_2            4            105
  CLUS_3            1            129
  CLUS_4            3             98
  CLUS_5            1             91
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1263) Variable = GALK1 MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GALK1 MUTATED        1      0      0      2
  GALK1 WILD-TYPE    134     92    172    174
D1263V1, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             1             134
  CLUS_2             0              92
  CLUS_3             0             172
  CLUS_4             2             174
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GALK1 MUTATED        2      0      0
  GALK1 WILD-TYPE    213    155    162
D1263V2, multiclass
[1] "Remove cluster labels:" "GALK1 MUTATED"         
clus
  GALK1 MUTATED GALK1 WILD-TYPE 
              2             530 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7716      TCGA-BR-7717      TCGA-BR-7722      TCGA-BR-7723 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7851      TCGA-BR-7901      TCGA-BR-7957      TCGA-BR-7958 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7959      TCGA-BR-8058      TCGA-BR-8059      TCGA-BR-8060 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8077      TCGA-BR-8078      TCGA-BR-8080      TCGA-BR-8081 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8284      TCGA-BR-8285      TCGA-BR-8286      TCGA-BR-8289 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8366      TCGA-BR-8367      TCGA-BR-8368      TCGA-BR-8369 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8370      TCGA-BR-8371      TCGA-BR-8372      TCGA-BR-8373 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8380      TCGA-BR-8381      TCGA-BR-8382      TCGA-BR-8384 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8483      TCGA-BR-8484      TCGA-BR-8485      TCGA-BR-8486 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8589      TCGA-BR-8590 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8683      TCGA-BR-8686      TCGA-BR-8687      TCGA-BR-8690 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A44T      TCGA-BR-A44U      TCGA-BR-A452      TCGA-BR-A453 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4CQ      TCGA-BR-A4CR      TCGA-BR-A4CS      TCGA-BR-A4IU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4IV      TCGA-BR-A4IY      TCGA-BR-A4IZ      TCGA-BR-A4J1 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4J2      TCGA-BR-A4J4      TCGA-BR-A4J5      TCGA-BR-A4J6 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4PE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4PF      TCGA-BR-A4QI      TCGA-BR-A4QL      TCGA-BR-A4QM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-5798      TCGA-CD-5799      TCGA-CD-5800      TCGA-CD-5801 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-5802      TCGA-CD-5803      TCGA-CD-5804      TCGA-CD-5813 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8524      TCGA-CD-8525      TCGA-CD-8526      TCGA-CD-8527 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8528      TCGA-CD-8529      TCGA-CD-8530      TCGA-CD-8531 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534      TCGA-CD-8535 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487      TCGA-CD-A489 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-A48A      TCGA-CD-A48C      TCGA-CD-A4MH      TCGA-CD-A4MI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-A4MJ      TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-5716 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-8573      TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-8578      TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A4YV      TCGA-D7-A4YX      TCGA-D7-A4YY      TCGA-D7-A4Z0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A6ET      TCGA-D7-A6EV      TCGA-D7-A6EX      TCGA-D7-A6EY 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A6EZ      TCGA-D7-A6F0      TCGA-D7-A6F2      TCGA-D7-A747 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A748      TCGA-D7-A74A      TCGA-D7-A74B      TCGA-EQ-5647 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-EQ-8122      TCGA-EQ-A4SO      TCGA-F1-6177      TCGA-F1-6874 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-F1-6875      TCGA-F1-A448      TCGA-F1-A72C      TCGA-FP-7735 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7916      TCGA-FP-7998      TCGA-FP-8099 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-8209      TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-A4BF      TCGA-FP-A8CX      TCGA-FP-A9TM      TCGA-HF-7131 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HF-7132      TCGA-HF-7133      TCGA-HF-7134      TCGA-HF-7136 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HF-A5NB      TCGA-HJ-7597      TCGA-HU-8238      TCGA-HU-8243 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-8244      TCGA-HU-8249      TCGA-HU-8602      TCGA-HU-8604 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-8610      TCGA-HU-A4G2      TCGA-HU-A4G3 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4G6      TCGA-HU-A4G8      TCGA-HU-A4G9      TCGA-HU-A4GC 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GP      TCGA-HU-A4GQ      TCGA-HU-A4GT 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GU      TCGA-HU-A4GX      TCGA-HU-A4GY      TCGA-HU-A4H0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4H2      TCGA-HU-A4H3      TCGA-HU-A4H4      TCGA-HU-A4H5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-HU-A4HD 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IC-A6RE      TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A3Y9      TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A4P3      TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A51D      TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A6QS      TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A97I      TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-8663      TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-A6RN      TCGA-IN-A6RO      TCGA-IN-A6RP      TCGA-IN-A6RR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-A6RS      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-JY-A93F 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-KB-A6F5      TCGA-KB-A6F7      TCGA-KB-A93G      TCGA-KB-A93J 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-KH-A6WC      TCGA-L5-A43C      TCGA-L5-A43E      TCGA-L5-A43H 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A43I      TCGA-L5-A43J      TCGA-L5-A43M      TCGA-L5-A4OE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OF      TCGA-L5-A4OG      TCGA-L5-A4OH      TCGA-L5-A4OI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OJ      TCGA-L5-A4OM      TCGA-L5-A4ON      TCGA-L5-A4OO 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR      TCGA-L5-A4OS 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW      TCGA-L5-A4OX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V      TCGA-L5-A88W 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891      TCGA-L5-A893 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG      TCGA-L5-A8NH 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK      TCGA-L5-A8NL 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ      TCGA-L5-A8NR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU      TCGA-L5-A8NV 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ      TCGA-LN-A49K 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N      TCGA-LN-A49O 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S      TCGA-LN-A49U 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49V      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A3      TCGA-LN-A4A4 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4A5      TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4MQ      TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A5U7      TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A7HY      TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A8I1      TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A9FR      TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-MX-A663      TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R5-A7O7      TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R5-A7ZR      TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A6DQ      TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A6XG      TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A8W5      TCGA-R6-A8W8      TCGA-R6-A8WC      TCGA-R6-A8WG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A7BS      TCGA-RD-A7BT      TCGA-RD-A7BW      TCGA-RD-A7C1 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0      TCGA-RD-A8N1 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A8N2      TCGA-RD-A8N4      TCGA-RD-A8N5      TCGA-RD-A8N6 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A8N9      TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-SW-A7EA      TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-V5-A7RE      TCGA-V5-AASV      TCGA-V5-AASW      TCGA-V5-AASX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8DL      TCGA-VQ-A8DT      TCGA-VQ-A8DU      TCGA-VQ-A8DV 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8DZ      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GALK1 MUTATED        2      1      0      0
  GALK1 WILD-TYPE    133    123    125     60
D1263V3, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             2             133
  CLUS_2             1             123
  CLUS_3             0             125
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GALK1 MUTATED        2      1      0
  GALK1 WILD-TYPE    251    101     89
D1263V4, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             2             251
  CLUS_2             1             101
  CLUS_3             0              89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GALK1 MUTATED        0      2      2
  GALK1 WILD-TYPE    164    245    141
D1263V5, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             0             164
  CLUS_2             2             245
  CLUS_3             2             141
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALK1 MUTATED        0      0      3      0      1
  GALK1 WILD-TYPE    121    104     88    121    116
D1263V6, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             0             121
  CLUS_2             0             104
  CLUS_3             3              88
  CLUS_4             0             121
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  GALK1 MUTATED        0      3      1
  GALK1 WILD-TYPE    159    248    164
D1263V7, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             0             159
  CLUS_2             3             248
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALK1 MUTATED        0      2      2      0      0
  GALK1 WILD-TYPE    118    129    149     94     81
D1263V8, multiclass
        clus
vv       GALK1 MUTATED GALK1 WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             2             149
  CLUS_4             0              94
  CLUS_5             0              81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALK1 MUTATED        0      1      0      1      0
  GALK1 WILD-TYPE    118    135    115     39     71
D1263V9, multiclass
[1] "Remove cluster labels:" "GALK1 MUTATED"         
clus
  GALK1 MUTATED GALK1 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8284      TCGA-BR-8286      TCGA-BR-8289 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8368      TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8372      TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8486      TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8683      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-A489      TCGA-CD-A48C      TCGA-CD-A4MH      TCGA-CD-A4MI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A9TM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GALK1 MUTATED        0      2      0      0      0
  GALK1 WILD-TYPE     48    107    130    101     92
D1263V10, multiclass
[1] "Remove cluster labels:" "GALK1 MUTATED"         
clus
  GALK1 MUTATED GALK1 WILD-TYPE 
              2             478 
     TCGA-2H-A9GF      TCGA-2H-A9GG      TCGA-2H-A9GH      TCGA-2H-A9GI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-2H-A9GJ      TCGA-2H-A9GK      TCGA-2H-A9GL      TCGA-2H-A9GM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-2H-A9GN      TCGA-2H-A9GO      TCGA-2H-A9GQ      TCGA-2H-A9GR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-B7-5816      TCGA-B7-5818      TCGA-B7-A5TI      TCGA-B7-A5TJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-B7-A5TK      TCGA-B7-A5TN      TCGA-BR-6452      TCGA-BR-6453 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6454      TCGA-BR-6455      TCGA-BR-6456      TCGA-BR-6457 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6458      TCGA-BR-6563      TCGA-BR-6564      TCGA-BR-6565 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6566      TCGA-BR-6705      TCGA-BR-6706      TCGA-BR-6707 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6709      TCGA-BR-6710      TCGA-BR-6801      TCGA-BR-6802 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-6803      TCGA-BR-6852      TCGA-BR-7196      TCGA-BR-7197 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7703      TCGA-BR-7704      TCGA-BR-7707      TCGA-BR-7715 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7717      TCGA-BR-7723      TCGA-BR-7851      TCGA-BR-7901 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-7957      TCGA-BR-7958      TCGA-BR-7959      TCGA-BR-8058 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8059      TCGA-BR-8060      TCGA-BR-8077      TCGA-BR-8078 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8080      TCGA-BR-8284      TCGA-BR-8286      TCGA-BR-8289 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8291      TCGA-BR-8295      TCGA-BR-8297      TCGA-BR-8360 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8361      TCGA-BR-8363      TCGA-BR-8364      TCGA-BR-8365 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8368      TCGA-BR-8369      TCGA-BR-8370      TCGA-BR-8371 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8372      TCGA-BR-8373      TCGA-BR-8380      TCGA-BR-8381 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8382      TCGA-BR-8384      TCGA-BR-8483      TCGA-BR-8485 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8486      TCGA-BR-8487      TCGA-BR-8588      TCGA-BR-8590 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8591      TCGA-BR-8592      TCGA-BR-8676      TCGA-BR-8677 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8678      TCGA-BR-8679      TCGA-BR-8680      TCGA-BR-8682 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-8683      TCGA-BR-8687      TCGA-BR-8690      TCGA-BR-A44T 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A452      TCGA-BR-A453      TCGA-BR-A4CQ      TCGA-BR-A4CR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4CS      TCGA-BR-A4IU      TCGA-BR-A4IV      TCGA-BR-A4IY 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4IZ      TCGA-BR-A4J1      TCGA-BR-A4J5      TCGA-BR-A4J6 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4J7      TCGA-BR-A4J8      TCGA-BR-A4PD      TCGA-BR-A4QI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-BR-A4QL      TCGA-BR-A4QM      TCGA-CD-5798      TCGA-CD-5799 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-5800      TCGA-CD-5801      TCGA-CD-5802      TCGA-CD-5803 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-5804      TCGA-CD-5813      TCGA-CD-8524      TCGA-CD-8525 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8526      TCGA-CD-8527      TCGA-CD-8529      TCGA-CD-8530 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8531      TCGA-CD-8532      TCGA-CD-8533      TCGA-CD-8534 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-8535      TCGA-CD-8536      TCGA-CD-A486      TCGA-CD-A487 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CD-A489      TCGA-CD-A48C      TCGA-CD-A4MH      TCGA-CD-A4MI 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-4437      TCGA-CG-4441      TCGA-CG-4449      TCGA-CG-5716 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5717      TCGA-CG-5718      TCGA-CG-5719      TCGA-CG-5720 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5721      TCGA-CG-5722      TCGA-CG-5723      TCGA-CG-5724 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5725      TCGA-CG-5726      TCGA-CG-5727      TCGA-CG-5728 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-CG-5730      TCGA-CG-5732      TCGA-CG-5733      TCGA-CG-5734 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-5577      TCGA-D7-5578      TCGA-D7-5579      TCGA-D7-6518 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6519      TCGA-D7-6520      TCGA-D7-6521      TCGA-D7-6522 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6524      TCGA-D7-6525      TCGA-D7-6526      TCGA-D7-6527 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6528      TCGA-D7-6815      TCGA-D7-6817      TCGA-D7-6818 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-6820      TCGA-D7-6822      TCGA-D7-8570      TCGA-D7-8572 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-8574      TCGA-D7-8575      TCGA-D7-8576      TCGA-D7-8578 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-8579      TCGA-D7-A4YT      TCGA-D7-A4YU      TCGA-D7-A4YV 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A4YY      TCGA-D7-A4Z0      TCGA-D7-A6ET      TCGA-D7-A6EV 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A6EX      TCGA-D7-A6EY      TCGA-D7-A6EZ      TCGA-D7-A6F0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A6F2      TCGA-D7-A747      TCGA-D7-A748      TCGA-D7-A74A 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-D7-A74B      TCGA-EQ-5647      TCGA-EQ-8122      TCGA-F1-6177 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-F1-6874      TCGA-F1-6875      TCGA-F1-A448      TCGA-FP-7735 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-7829      TCGA-FP-7998      TCGA-FP-8099      TCGA-FP-8209 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-FP-8210      TCGA-FP-8211      TCGA-FP-8631      TCGA-FP-A9TM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HF-7131      TCGA-HF-7132      TCGA-HF-7134      TCGA-HF-7136 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-8238      TCGA-HU-8243      TCGA-HU-8602      TCGA-HU-8604 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-8608      TCGA-HU-A4G3      TCGA-HU-A4G8      TCGA-HU-A4GC 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GD      TCGA-HU-A4GF      TCGA-HU-A4GH      TCGA-HU-A4GJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GN      TCGA-HU-A4GQ      TCGA-HU-A4GT      TCGA-HU-A4GX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4GY      TCGA-HU-A4H2      TCGA-HU-A4H4      TCGA-HU-A4H5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-HU-A4H6      TCGA-HU-A4H8      TCGA-HU-A4HB      TCGA-IC-A6RE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IC-A6RF      TCGA-IG-A3I8      TCGA-IG-A3QL      TCGA-IG-A3Y9 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A3YA      TCGA-IG-A3YB      TCGA-IG-A3YC      TCGA-IG-A4P3 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A4QS      TCGA-IG-A4QT      TCGA-IG-A50L      TCGA-IG-A51D 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A5B8      TCGA-IG-A5S3      TCGA-IG-A625      TCGA-IG-A6QS 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IG-A7DP      TCGA-IG-A8O2      TCGA-IG-A97H      TCGA-IG-A97I 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-7806      TCGA-IN-7808      TCGA-IN-8462      TCGA-IN-8663 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-A6RI      TCGA-IN-A6RJ      TCGA-IN-A6RL      TCGA-IN-A6RN 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-A6RP      TCGA-IN-A7NR      TCGA-IN-A7NT      TCGA-IN-A7NU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-IN-AB1V      TCGA-IN-AB1X      TCGA-IP-7968      TCGA-JY-A6F8 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A6FA      TCGA-JY-A6FB      TCGA-JY-A6FD      TCGA-JY-A6FE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A6FG      TCGA-JY-A6FH      TCGA-JY-A938      TCGA-JY-A939 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-JY-A93C      TCGA-JY-A93D      TCGA-JY-A93E      TCGA-KB-A6F5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-KB-A6F7      TCGA-KB-A93J      TCGA-KH-A6WC      TCGA-L5-A43C 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A43E      TCGA-L5-A43H      TCGA-L5-A43I      TCGA-L5-A43J 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A43M      TCGA-L5-A4OE      TCGA-L5-A4OF      TCGA-L5-A4OG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OH      TCGA-L5-A4OI      TCGA-L5-A4OM      TCGA-L5-A4ON 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OO      TCGA-L5-A4OP      TCGA-L5-A4OQ      TCGA-L5-A4OR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OS      TCGA-L5-A4OT      TCGA-L5-A4OU      TCGA-L5-A4OW 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A4OX      TCGA-L5-A88S      TCGA-L5-A88T      TCGA-L5-A88V 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A88W      TCGA-L5-A88Y      TCGA-L5-A88Z      TCGA-L5-A891 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A893      TCGA-L5-A8NE      TCGA-L5-A8NF      TCGA-L5-A8NG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NH      TCGA-L5-A8NI      TCGA-L5-A8NJ      TCGA-L5-A8NK 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NL      TCGA-L5-A8NM      TCGA-L5-A8NN      TCGA-L5-A8NQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NR      TCGA-L5-A8NS      TCGA-L5-A8NT      TCGA-L5-A8NU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-L5-A8NV      TCGA-L5-A8NW      TCGA-L7-A56G      TCGA-L7-A6VZ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49K      TCGA-LN-A49L      TCGA-LN-A49M      TCGA-LN-A49N 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49O      TCGA-LN-A49P      TCGA-LN-A49R      TCGA-LN-A49S 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A49U      TCGA-LN-A49W      TCGA-LN-A49X      TCGA-LN-A49Y 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4A1      TCGA-LN-A4A2      TCGA-LN-A4A4      TCGA-LN-A4A5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4A6      TCGA-LN-A4A8      TCGA-LN-A4A9      TCGA-LN-A4MQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A4MR      TCGA-LN-A5U5      TCGA-LN-A5U6      TCGA-LN-A5U7 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A7HV      TCGA-LN-A7HW      TCGA-LN-A7HX      TCGA-LN-A7HY 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A7HZ      TCGA-LN-A8HZ      TCGA-LN-A8I0      TCGA-LN-A8I1 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-LN-A9FO      TCGA-LN-A9FP      TCGA-LN-A9FQ      TCGA-LN-A9FR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-M9-A5M8      TCGA-MX-A5UG      TCGA-MX-A5UJ      TCGA-MX-A663 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-MX-A666      TCGA-Q9-A6FU      TCGA-Q9-A6FW      TCGA-R5-A7O7 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R5-A7ZE      TCGA-R5-A7ZF      TCGA-R5-A7ZI      TCGA-R5-A7ZR 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R5-A804      TCGA-R5-A805      TCGA-R6-A6DN      TCGA-R6-A6DQ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A6KZ      TCGA-R6-A6L4      TCGA-R6-A6L6      TCGA-R6-A6XG 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A6XQ      TCGA-R6-A6Y0      TCGA-R6-A6Y2      TCGA-R6-A8W5 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-R6-A8W8      TCGA-R6-A8WG      TCGA-RD-A7BS      TCGA-RD-A7BW 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A7C1      TCGA-RD-A8MV      TCGA-RD-A8MW      TCGA-RD-A8N0 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RD-A8N1      TCGA-RD-A8N5      TCGA-RD-A8N6      TCGA-RD-A8N9 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-RE-A7BO      TCGA-S8-A6BV      TCGA-S8-A6BW      TCGA-SW-A7EA 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-SW-A7EB      TCGA-V5-A7RB      TCGA-V5-A7RC      TCGA-V5-A7RE 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-V5-AASW      TCGA-V5-AASX      TCGA-VQ-A8DL      TCGA-VQ-A8DU 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8DV      TCGA-VQ-A8E2      TCGA-VQ-A8E7      TCGA-VQ-A8P2 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8P3      TCGA-VQ-A8PE      TCGA-VQ-A8PK      TCGA-VQ-A8PM 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A8PQ      TCGA-VQ-A91Q      TCGA-VQ-A91U      TCGA-VQ-A91V 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-A92D      TCGA-VQ-A94T      TCGA-VQ-AA64      TCGA-VQ-AA68 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-AA69      TCGA-VQ-AA6A      TCGA-VQ-AA6B      TCGA-VQ-AA6F 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VQ-AA6G      TCGA-VQ-AA6I      TCGA-VQ-AA6J      TCGA-VQ-AA6K 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8EO      TCGA-VR-A8EP      TCGA-VR-A8EQ      TCGA-VR-A8ER 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8ET      TCGA-VR-A8EU      TCGA-VR-A8EW      TCGA-VR-A8EX 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-A8EY      TCGA-VR-A8EZ      TCGA-VR-A8Q7      TCGA-VR-AA4D 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-VR-AA4G      TCGA-VR-AA7B      TCGA-VR-AA7D      TCGA-VR-AA7I 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-X8-AAAR      TCGA-XP-A8T6      TCGA-XP-A8T7      TCGA-XP-A8T8 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-Z6-A8JD      TCGA-Z6-A8JE      TCGA-Z6-A9VB      TCGA-Z6-AAPN 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 
     TCGA-ZA-A8F6      TCGA-ZR-A9CJ 
"GALK1 WILD-TYPE" "GALK1 WILD-TYPE" 

Clustering(1264) Variable = PEG3 MUTATION ANALYSIS
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PEG3 MUTATED       15      6      5     17
  PEG3 WILD-TYPE    120     86    167    159
D1264V1, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1           15            120
  CLUS_2            6             86
  CLUS_3            5            167
  CLUS_4           17            159
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PEG3 MUTATED       32      5      2
  PEG3 WILD-TYPE    183    150    160
D1264V2, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1           32            183
  CLUS_2            5            150
  CLUS_3            2            160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4
  PEG3 MUTATED       10     13      6      2
  PEG3 WILD-TYPE    125    111    119     58
D1264V3, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1           10            125
  CLUS_2           13            111
  CLUS_3            6            119
  CLUS_4            2             58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PEG3 MUTATED       19      7      5
  PEG3 WILD-TYPE    234     95     84
D1264V4, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1           19            234
  CLUS_2            7             95
  CLUS_3            5             84
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PEG3 MUTATED        8     28      6
  PEG3 WILD-TYPE    156    219    137
D1264V5, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1            8            156
  CLUS_2           28            219
  CLUS_3            6            137
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PEG3 MUTATED        5     13     16      4      4
  PEG3 WILD-TYPE    116     91     75    117    113
D1264V6, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1            5            116
  CLUS_2           13             91
  CLUS_3           16             75
  CLUS_4            4            117
  CLUS_5            4            113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3
  PEG3 MUTATED        5     32      6
  PEG3 WILD-TYPE    154    219    159
D1264V7, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1            5            154
  CLUS_2           32            219
  CLUS_3            6            159
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PEG3 MUTATED       10     22      9      0      2
  PEG3 WILD-TYPE    108    109    142     94     79
D1264V8, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1           10            108
  CLUS_2           22            109
  CLUS_3            9            142
  CLUS_4            0             94
  CLUS_5            2             79
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PEG3 MUTATED        3     23      2      4      5
  PEG3 WILD-TYPE    115    113    113     36     66
D1264V9, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1            3            115
  CLUS_2           23            113
  CLUS_3            2            113
  CLUS_4            4             36
  CLUS_5            5             66
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                vv
clus             CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  PEG3 MUTATED        4     18     11      4      0
  PEG3 WILD-TYPE     44     91    119     97     92
D1264V10, multiclass
        clus
vv       PEG3 MUTATED PEG3 WILD-TYPE
  CLUS_1            4             44
  CLUS_2           18             91
  CLUS_3           11            119
  CLUS_4            4             97
  CLUS_5            0             92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1265) Variable = GPR120 MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR120 MUTATED        0      0      0      7
  GPR120 WILD-TYPE    135     92    172    169
D1265V1, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              0              135
  CLUS_2              0               92
  CLUS_3              0              172
  CLUS_4              7              169
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR120 MUTATED        6      0      1
  GPR120 WILD-TYPE    209    155    161
D1265V2, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              6              209
  CLUS_2              0              155
  CLUS_3              1              161
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  GPR120 MUTATED        1      3      0      2
  GPR120 WILD-TYPE    134    121    125     58
D1265V3, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              1              134
  CLUS_2              3              121
  CLUS_3              0              125
  CLUS_4              2               58
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR120 MUTATED        5      1      0
  GPR120 WILD-TYPE    248    101     89
D1265V4, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              5              248
  CLUS_2              1              101
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR120 MUTATED        1      5      1
  GPR120 WILD-TYPE    163    242    142
D1265V5, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              1              163
  CLUS_2              5              242
  CLUS_3              1              142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR120 MUTATED        0      2      3      0      2
  GPR120 WILD-TYPE    121    102     88    121    115
D1265V6, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              0              121
  CLUS_2              2              102
  CLUS_3              3               88
  CLUS_4              0              121
  CLUS_5              2              115
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  GPR120 MUTATED        0      6      1
  GPR120 WILD-TYPE    159    245    164
D1265V7, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              0              159
  CLUS_2              6              245
  CLUS_3              1              164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR120 MUTATED        0      4      3      0      0
  GPR120 WILD-TYPE    118    127    148     94     81
D1265V8, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              4              127
  CLUS_3              3              148
  CLUS_4              0               94
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR120 MUTATED        0      2      0      1      3
  GPR120 WILD-TYPE    118    134    115     39     68
D1265V9, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              0              118
  CLUS_2              2              134
  CLUS_3              0              115
  CLUS_4              1               39
  CLUS_5              3               68
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  GPR120 MUTATED        1      3      2      0      0
  GPR120 WILD-TYPE     47    106    128    101     92
D1265V10, multiclass
        clus
vv       GPR120 MUTATED GPR120 WILD-TYPE
  CLUS_1              1               47
  CLUS_2              3              106
  CLUS_3              2              128
  CLUS_4              0              101
  CLUS_5              0               92
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1266) Variable = RRP7A MUTATION ANALYSIS
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRP7A MUTATED        0      0      1      4
  RRP7A WILD-TYPE    135     92    171    172
D1266V1, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             0             135
  CLUS_2             0              92
  CLUS_3             1             171
  CLUS_4             4             172
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRP7A MUTATED        3      1      0
  RRP7A WILD-TYPE    212    154    162
D1266V2, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             3             212
  CLUS_2             1             154
  CLUS_3             0             162
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4
  RRP7A MUTATED        0      2      3      0
  RRP7A WILD-TYPE    135    122    122     60
D1266V3, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             0             135
  CLUS_2             2             122
  CLUS_3             3             122
  CLUS_4             0              60
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRP7A MUTATED        2      0      3
  RRP7A WILD-TYPE    251    102     86
D1266V4, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             2             251
  CLUS_2             0             102
  CLUS_3             3              86
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRP7A MUTATED        3      1      1
  RRP7A WILD-TYPE    161    246    142
D1266V5, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             3             161
  CLUS_2             1             246
  CLUS_3             1             142
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRP7A MUTATED        1      1      1      1      1
  RRP7A WILD-TYPE    120    103     90    120    116
D1266V6, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             1             120
  CLUS_2             1             103
  CLUS_3             1              90
  CLUS_4             1             120
  CLUS_5             1             116
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3
  RRP7A MUTATED        3      1      1
  RRP7A WILD-TYPE    156    250    164
D1266V7, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             3             156
  CLUS_2             1             250
  CLUS_3             1             164
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRP7A MUTATED        0      2      0      2      1
  RRP7A WILD-TYPE    118    129    151     92     80
D1266V8, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             0             118
  CLUS_2             2             129
  CLUS_3             0             151
  CLUS_4             2              92
  CLUS_5             1              80
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRP7A MUTATED        1      2      0      1      0
  RRP7A WILD-TYPE    117    134    115     39     71
D1266V9, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             1             117
  CLUS_2             2             134
  CLUS_3             0             115
  CLUS_4             1              39
  CLUS_5             0              71
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                 vv
clus              CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  RRP7A MUTATED        0      1      1      0      2
  RRP7A WILD-TYPE     48    108    129    101     90
D1266V10, multiclass
        clus
vv       RRP7A MUTATED RRP7A WILD-TYPE
  CLUS_1             0              48
  CLUS_2             1             108
  CLUS_3             1             129
  CLUS_4             0             101
  CLUS_5             2              90
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"

Clustering(1267) Variable = ARID5B MUTATION ANALYSIS
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID5B MUTATED        2      1      5     10
  ARID5B WILD-TYPE    133     91    167    166
D1267V1, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              2              133
  CLUS_2              1               91
  CLUS_3              5              167
  CLUS_4             10              166
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID5B MUTATED        9      3      2
  ARID5B WILD-TYPE    206    152    160
D1267V2, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              9              206
  CLUS_2              3              152
  CLUS_3              2              160
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4
  ARID5B MUTATED        8      8      0      1
  ARID5B WILD-TYPE    127    116    125     59
D1267V3, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              8              127
  CLUS_2              8              116
  CLUS_3              0              125
  CLUS_4              1               59
[1] 4 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID5B MUTATED       12      5      0
  ARID5B WILD-TYPE    241     97     89
D1267V4, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1             12              241
  CLUS_2              5               97
  CLUS_3              0               89
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID5B MUTATED        4      9      5
  ARID5B WILD-TYPE    160    238    138
D1267V5, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              4              160
  CLUS_2              9              238
  CLUS_3              5              138
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID5B MUTATED        1      3      7      3      4
  ARID5B WILD-TYPE    120    101     84    118    113
D1267V6, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              1              120
  CLUS_2              3              101
  CLUS_3              7               84
  CLUS_4              3              118
  CLUS_5              4              113
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3
  ARID5B MUTATED        5     11      2
  ARID5B WILD-TYPE    154    240    163
D1267V7, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              5              154
  CLUS_2             11              240
  CLUS_3              2              163
[1] 3 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID5B MUTATED        2      6      7      3      0
  ARID5B WILD-TYPE    116    125    144     91     81
D1267V8, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              2              116
  CLUS_2              6              125
  CLUS_3              7              144
  CLUS_4              3               91
  CLUS_5              0               81
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID5B MUTATED        3      4      0      0      6
  ARID5B WILD-TYPE    115    132    115     40     65
D1267V9, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              3              115
  CLUS_2              4              132
  CLUS_3              0              115
  CLUS_4              0               40
  CLUS_5              6               65
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
                  vv
clus               CLUS_1 CLUS_2 CLUS_3 CLUS_4 CLUS_5
  ARID5B MUTATED        0      5      5      0      3
  ARID5B WILD-TYPE     48    104    125    101     89
D1267V10, multiclass
        clus
vv       ARID5B MUTATED ARID5B WILD-TYPE
  CLUS_1              0               48
  CLUS_2              5              104
  CLUS_3              5              125
  CLUS_4              0              101
  CLUS_5              3               89
[1] 5 2
[1] TRUE
[1] "dimension of contingency table is larger than 2 by 2 --- so will do fisher test with simulate.p.value=TRUE"
