This pipeline computes the correlation between significant arm-level copy number variations (cnvs) and molecular subtypes.
Testing the association between copy number variation 82 arm-level events and 10 molecular subtypes across 408 patients, 280 significant findings detected with P value < 0.05 and Q value < 0.25.
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1p gain cnv correlated to 'CN_CNMF'.
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1q gain cnv correlated to 'CN_CNMF'.
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2p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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2q gain cnv correlated to 'CN_CNMF'.
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3p gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q gain cnv correlated to 'CN_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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4p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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4q gain cnv correlated to 'CN_CNMF'.
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5p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5q gain cnv correlated to 'CN_CNMF', 'RPPA_CNMF', and 'RPPA_CHIERARCHICAL'.
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6p gain cnv correlated to 'CN_CNMF'.
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6q gain cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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7p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7q gain cnv correlated to 'CN_CNMF'.
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8p gain cnv correlated to 'CN_CNMF', 'RPPA_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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8q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'RPPA_CNMF'.
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9p gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9q gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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10p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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10q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CNMF'.
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11p gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11q gain cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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12p gain cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12q gain cnv correlated to 'MIRSEQ_MATURE_CHIERARCHICAL'.
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13q gain cnv correlated to 'CN_CNMF'.
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14q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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15q gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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16p gain cnv correlated to 'CN_CNMF'.
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16q gain cnv correlated to 'CN_CNMF'.
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17p gain cnv correlated to 'CN_CNMF'.
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17q gain cnv correlated to 'CN_CNMF' and 'RPPA_CNMF'.
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18p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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18q gain cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19p gain cnv correlated to 'CN_CNMF'.
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19q gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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20p gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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20q gain cnv correlated to 'CN_CNMF'.
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21q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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22q gain cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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xp gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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xq gain cnv correlated to 'RPPA_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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1q loss cnv correlated to 'MIRSEQ_MATURE_CNMF'.
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2p loss cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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2q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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3p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q loss cnv correlated to 'MRNASEQ_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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4p loss cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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4q loss cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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5p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', and 'MRNASEQ_CHIERARCHICAL'.
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5q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
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6p loss cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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6q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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7q loss cnv correlated to 'CN_CNMF'.
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8p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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8q loss cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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9p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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10p loss cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
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10q loss cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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11p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11q loss cnv correlated to 'CN_CNMF' and 'RPPA_CHIERARCHICAL'.
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12p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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12q loss cnv correlated to 'CN_CNMF'.
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13q loss cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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14q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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15q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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16p loss cnv correlated to 'CN_CNMF' and 'RPPA_CNMF'.
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16q loss cnv correlated to 'CN_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
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17p loss cnv correlated to 'CN_CNMF'.
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18p loss cnv correlated to 'CN_CNMF'.
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18q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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19p loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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19q loss cnv correlated to 'CN_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
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20q loss cnv correlated to 'MRNASEQ_CNMF'.
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21q loss cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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22q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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xq loss cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
xp gain | 65 (16%) | 343 |
0.00617 (0.0308) |
0.0002 (0.00208) |
0.00021 (0.0021) |
0.00879 (0.0396) |
1e-05 (0.000155) |
0.0381 (0.121) |
0.0422 (0.13) |
0.0436 (0.132) |
0.0153 (0.0593) |
0.0382 (0.121) |
5p gain | 166 (41%) | 242 |
1e-05 (0.000155) |
0.0253 (0.0879) |
0.00035 (0.00334) |
0.00288 (0.0172) |
0.00408 (0.0226) |
0.00055 (0.00465) |
0.0399 (0.124) |
0.244 (0.404) |
0.0246 (0.0866) |
0.00454 (0.0247) |
3p loss | 51 (12%) | 357 |
0.043 (0.132) |
0.0083 (0.0376) |
0.0167 (0.063) |
0.00661 (0.0323) |
1e-05 (0.000155) |
1e-05 (0.000155) |
0.014 (0.0552) |
0.14 (0.284) |
6e-05 (0.000703) |
0.00968 (0.0416) |
9p loss | 174 (43%) | 234 |
1e-05 (0.000155) |
0.0002 (0.00208) |
0.00322 (0.0189) |
0.00017 (0.00183) |
6e-05 (0.000703) |
1e-05 (0.000155) |
0.00702 (0.0335) |
0.184 (0.338) |
4e-05 (0.000521) |
0.00043 (0.00392) |
9q loss | 169 (41%) | 239 |
1e-05 (0.000155) |
1e-05 (0.000155) |
0.0005 (0.00441) |
1e-05 (0.000155) |
1e-05 (0.000155) |
1e-05 (0.000155) |
5e-05 (0.000612) |
0.309 (0.47) |
1e-05 (0.000155) |
2e-05 (0.000278) |
11p loss | 178 (44%) | 230 |
1e-05 (0.000155) |
1e-05 (0.000155) |
0.12 (0.261) |
0.00012 (0.00137) |
0.00021 (0.0021) |
1e-05 (0.000155) |
2e-05 (0.000278) |
0.455 (0.588) |
2e-05 (0.000278) |
0.00195 (0.0125) |
2p gain | 111 (27%) | 297 |
1e-05 (0.000155) |
6e-05 (0.000703) |
0.133 (0.276) |
0.604 (0.701) |
0.0313 (0.105) |
0.0102 (0.043) |
0.00653 (0.0323) |
0.0179 (0.0665) |
0.206 (0.358) |
0.00236 (0.0144) |
9q gain | 56 (14%) | 352 |
2e-05 (0.000278) |
0.0805 (0.2) |
0.159 (0.306) |
0.00612 (0.0308) |
0.00203 (0.0128) |
0.00043 (0.00392) |
0.0399 (0.124) |
0.886 (0.921) |
2e-05 (0.000278) |
0.00121 (0.00848) |
21q gain | 116 (28%) | 292 |
1e-05 (0.000155) |
3e-05 (0.000397) |
0.527 (0.639) |
0.405 (0.552) |
0.0795 (0.199) |
0.00074 (0.00578) |
0.00167 (0.0112) |
0.00037 (0.00349) |
0.00424 (0.0233) |
0.0112 (0.0464) |
8p loss | 188 (46%) | 220 |
1e-05 (0.000155) |
0.00383 (0.0216) |
0.0137 (0.0544) |
0.00098 (0.00724) |
0.00279 (0.0169) |
0.00578 (0.0294) |
0.166 (0.316) |
0.037 (0.12) |
0.0655 (0.174) |
0.448 (0.587) |
13q loss | 85 (21%) | 323 |
1e-05 (0.000155) |
0.505 (0.624) |
0.00016 (0.00175) |
0.527 (0.639) |
0.00057 (0.00477) |
0.189 (0.341) |
5e-05 (0.000612) |
0.012 (0.0486) |
0.00939 (0.041) |
0.00119 (0.00841) |
14q loss | 121 (30%) | 287 |
1e-05 (0.000155) |
5e-05 (0.000612) |
0.808 (0.857) |
0.417 (0.563) |
0.055 (0.155) |
0.00019 (0.00202) |
0.00075 (0.0058) |
0.00119 (0.00841) |
0.0036 (0.0205) |
0.00115 (0.00827) |
15q loss | 144 (35%) | 264 |
1e-05 (0.000155) |
1e-05 (0.000155) |
0.11 (0.247) |
0.0677 (0.177) |
0.00543 (0.028) |
0.288 (0.453) |
0.023 (0.0825) |
0.00929 (0.0407) |
0.0102 (0.043) |
0.0233 (0.0829) |
21q loss | 79 (19%) | 329 |
0.0175 (0.0656) |
0.0656 (0.174) |
0.0136 (0.0544) |
0.0265 (0.0912) |
0.0584 (0.161) |
0.00657 (0.0323) |
0.003 (0.0177) |
0.0906 (0.216) |
0.0112 (0.0464) |
0.0083 (0.0376) |
3p gain | 143 (35%) | 265 |
1e-05 (0.000155) |
0.184 (0.338) |
0.887 (0.921) |
0.529 (0.64) |
0.0156 (0.06) |
0.0129 (0.052) |
0.0486 (0.142) |
0.00828 (0.0376) |
0.116 (0.255) |
0.0199 (0.0729) |
4p gain | 38 (9%) | 370 |
0.00053 (0.00457) |
0.00908 (0.0401) |
0.00488 (0.0258) |
0.0437 (0.132) |
0.27 (0.434) |
0.00974 (0.0416) |
0.0142 (0.0556) |
0.447 (0.587) |
0.158 (0.305) |
0.121 (0.261) |
11p gain | 29 (7%) | 379 |
0.00828 (0.0376) |
0.242 (0.402) |
0.06 (0.165) |
0.00898 (0.04) |
0.0018 (0.0118) |
0.0122 (0.0494) |
0.062 (0.167) |
0.625 (0.716) |
0.00139 (0.00942) |
0.00479 (0.0258) |
18p gain | 116 (28%) | 292 |
1e-05 (0.000155) |
0.00762 (0.0357) |
0.636 (0.723) |
0.431 (0.574) |
1e-05 (0.000155) |
0.0293 (0.0992) |
0.00031 (0.00303) |
0.614 (0.709) |
0.29 (0.453) |
0.0385 (0.122) |
4q loss | 136 (33%) | 272 |
1e-05 (0.000155) |
0.0519 (0.149) |
0.109 (0.245) |
0.0114 (0.0466) |
0.00514 (0.0268) |
0.00054 (0.00461) |
0.00555 (0.0284) |
0.926 (0.948) |
0.0101 (0.043) |
0.0717 (0.185) |
22q loss | 160 (39%) | 248 |
1e-05 (0.000155) |
0.0106 (0.0441) |
0.143 (0.287) |
0.00058 (0.0048) |
0.00437 (0.0239) |
0.00064 (0.00515) |
0.0548 (0.154) |
0.75 (0.813) |
0.0373 (0.12) |
0.0675 (0.177) |
9p gain | 69 (17%) | 339 |
1e-05 (0.000155) |
0.359 (0.515) |
0.175 (0.327) |
0.0166 (0.0628) |
0.122 (0.261) |
0.178 (0.331) |
0.00971 (0.0416) |
0.558 (0.66) |
0.00014 (0.00157) |
2e-05 (0.000278) |
2q loss | 92 (23%) | 316 |
0.00064 (0.00515) |
0.00585 (0.0296) |
0.404 (0.551) |
0.337 (0.494) |
0.0106 (0.0441) |
0.0266 (0.0912) |
0.429 (0.573) |
0.953 (0.964) |
0.0364 (0.118) |
0.553 (0.659) |
4p loss | 144 (35%) | 264 |
1e-05 (0.000155) |
0.12 (0.261) |
0.165 (0.316) |
0.00332 (0.019) |
0.00526 (0.0273) |
5e-05 (0.000612) |
0.00042 (0.00391) |
0.426 (0.57) |
0.058 (0.16) |
0.186 (0.339) |
3q gain | 179 (44%) | 229 |
1e-05 (0.000155) |
0.42 (0.565) |
0.124 (0.264) |
0.666 (0.748) |
0.216 (0.371) |
0.065 (0.173) |
0.00816 (0.0376) |
0.0079 (0.0368) |
0.0559 (0.157) |
0.00964 (0.0416) |
7p gain | 171 (42%) | 237 |
1e-05 (0.000155) |
0.0341 (0.113) |
0.00327 (0.019) |
0.198 (0.351) |
0.0976 (0.229) |
0.17 (0.32) |
0.0565 (0.158) |
0.608 (0.703) |
0.121 (0.261) |
0.0435 (0.132) |
10p gain | 117 (29%) | 291 |
1e-05 (0.000155) |
0.00051 (0.00445) |
0.278 (0.442) |
0.325 (0.484) |
0.0272 (0.0927) |
0.00483 (0.0258) |
0.0725 (0.186) |
0.973 (0.982) |
0.435 (0.577) |
0.745 (0.81) |
14q gain | 57 (14%) | 351 |
0.00669 (0.0325) |
0.0254 (0.0879) |
0.552 (0.659) |
0.458 (0.589) |
0.0114 (0.0466) |
0.0296 (0.1) |
0.374 (0.526) |
0.322 (0.483) |
0.306 (0.467) |
0.16 (0.308) |
18q gain | 61 (15%) | 347 |
0.0069 (0.0331) |
0.184 (0.338) |
0.32 (0.481) |
0.173 (0.323) |
0.0463 (0.139) |
0.451 (0.587) |
0.0423 (0.13) |
0.293 (0.457) |
0.559 (0.661) |
0.00284 (0.0171) |
5p loss | 54 (13%) | 354 |
0.00114 (0.00827) |
0.00015 (0.00166) |
0.0848 (0.205) |
0.00221 (0.0137) |
0.0536 (0.152) |
0.00049 (0.00437) |
0.713 (0.787) |
0.672 (0.751) |
0.0973 (0.229) |
0.208 (0.36) |
5q loss | 160 (39%) | 248 |
1e-05 (0.000155) |
0.00172 (0.0115) |
0.42 (0.565) |
0.22 (0.375) |
0.416 (0.562) |
0.0203 (0.0741) |
0.0468 (0.139) |
0.0944 (0.222) |
0.473 (0.599) |
0.101 (0.235) |
6q loss | 159 (39%) | 249 |
1e-05 (0.000155) |
0.00892 (0.04) |
0.018 (0.0666) |
0.4 (0.548) |
0.678 (0.754) |
0.0354 (0.116) |
0.0816 (0.201) |
0.154 (0.301) |
0.509 (0.626) |
0.432 (0.574) |
12p loss | 54 (13%) | 354 |
0.00028 (0.00277) |
0.0161 (0.0613) |
0.39 (0.541) |
0.122 (0.261) |
0.025 (0.0873) |
0.022 (0.0796) |
0.275 (0.44) |
0.362 (0.517) |
0.181 (0.336) |
0.941 (0.958) |
18q loss | 146 (36%) | 262 |
1e-05 (0.000155) |
0.938 (0.956) |
0.571 (0.669) |
0.423 (0.568) |
0.776 (0.836) |
0.0472 (0.139) |
0.0375 (0.12) |
0.00385 (0.0216) |
0.084 (0.204) |
0.127 (0.268) |
xq loss | 83 (20%) | 325 |
0.0849 (0.205) |
0.0091 (0.0401) |
0.521 (0.636) |
0.08 (0.199) |
0.0212 (0.0771) |
0.218 (0.373) |
0.109 (0.245) |
0.295 (0.458) |
0.0161 (0.0613) |
0.0339 (0.112) |
5q gain | 51 (12%) | 357 |
0.00077 (0.00585) |
0.054 (0.153) |
0.00215 (0.0135) |
0.0356 (0.116) |
0.805 (0.856) |
0.258 (0.42) |
0.0892 (0.213) |
0.521 (0.636) |
0.496 (0.616) |
0.0799 (0.199) |
8p gain | 90 (22%) | 318 |
1e-05 (0.000155) |
0.48 (0.605) |
0.00137 (0.00936) |
0.133 (0.276) |
0.299 (0.461) |
0.832 (0.88) |
0.247 (0.407) |
0.0153 (0.0593) |
0.622 (0.714) |
0.314 (0.475) |
8q gain | 200 (49%) | 208 |
1e-05 (0.000155) |
0.00388 (0.0216) |
0.00021 (0.0021) |
0.539 (0.647) |
0.536 (0.644) |
1 (1.00) |
0.222 (0.375) |
0.0514 (0.149) |
0.509 (0.626) |
0.454 (0.587) |
10q gain | 44 (11%) | 364 |
0.00189 (0.0123) |
0.00176 (0.0116) |
0.725 (0.793) |
0.464 (0.592) |
0.396 (0.546) |
0.0512 (0.149) |
0.00723 (0.0343) |
0.459 (0.589) |
0.0679 (0.177) |
0.453 (0.587) |
11q gain | 47 (12%) | 361 |
0.00331 (0.019) |
0.627 (0.717) |
0.367 (0.52) |
0.0179 (0.0665) |
0.0753 (0.192) |
0.0791 (0.199) |
0.297 (0.46) |
0.778 (0.837) |
0.00512 (0.0268) |
0.166 (0.316) |
15q gain | 35 (9%) | 373 |
0.168 (0.318) |
0.00134 (0.00923) |
0.00062 (0.00508) |
0.0691 (0.179) |
0.102 (0.237) |
0.0319 (0.106) |
0.446 (0.587) |
0.725 (0.793) |
0.122 (0.261) |
0.141 (0.285) |
xq gain | 45 (11%) | 363 |
0.137 (0.28) |
0.138 (0.28) |
0.0228 (0.082) |
0.204 (0.356) |
0.044 (0.133) |
0.567 (0.667) |
0.0631 (0.169) |
0.0309 (0.104) |
0.527 (0.639) |
0.168 (0.318) |
16q loss | 107 (26%) | 301 |
1e-05 (0.000155) |
0.403 (0.551) |
0.0148 (0.0578) |
0.34 (0.497) |
0.0417 (0.129) |
0.389 (0.541) |
0.199 (0.353) |
0.89 (0.921) |
0.564 (0.665) |
0.467 (0.593) |
19p loss | 95 (23%) | 313 |
3e-05 (0.000397) |
0.052 (0.149) |
0.084 (0.204) |
0.194 (0.348) |
0.00193 (0.0125) |
0.00486 (0.0258) |
0.146 (0.292) |
0.239 (0.398) |
0.671 (0.75) |
0.447 (0.587) |
19q loss | 59 (14%) | 349 |
0.00095 (0.00708) |
0.221 (0.375) |
0.0365 (0.118) |
0.31 (0.472) |
0.00687 (0.0331) |
0.204 (0.356) |
0.371 (0.523) |
0.496 (0.616) |
0.4 (0.548) |
0.519 (0.635) |
6q gain | 39 (10%) | 369 |
0.00296 (0.0176) |
0.948 (0.961) |
0.618 (0.711) |
0.26 (0.422) |
0.12 (0.261) |
0.3 (0.461) |
0.415 (0.562) |
0.153 (0.301) |
0.0467 (0.139) |
0.361 (0.516) |
12p gain | 116 (28%) | 292 |
0.00094 (0.00707) |
0.323 (0.483) |
0.204 (0.356) |
0.981 (0.99) |
0.143 (0.287) |
0.858 (0.902) |
0.519 (0.635) |
0.723 (0.792) |
0.463 (0.592) |
0.0389 (0.123) |
17q gain | 135 (33%) | 273 |
1e-05 (0.000155) |
0.072 (0.185) |
0.0444 (0.133) |
0.924 (0.948) |
0.555 (0.659) |
0.185 (0.339) |
0.247 (0.407) |
0.268 (0.431) |
0.166 (0.316) |
0.334 (0.493) |
19q gain | 132 (32%) | 276 |
1e-05 (0.000155) |
0.025 (0.0873) |
0.131 (0.272) |
0.957 (0.967) |
0.235 (0.395) |
0.492 (0.616) |
0.0979 (0.229) |
0.432 (0.574) |
0.201 (0.353) |
0.608 (0.703) |
20p gain | 201 (49%) | 207 |
1e-05 (0.000155) |
0.187 (0.341) |
0.329 (0.488) |
0.0648 (0.173) |
0.156 (0.303) |
0.0414 (0.128) |
0.125 (0.264) |
0.19 (0.344) |
0.0578 (0.16) |
0.345 (0.502) |
3q loss | 23 (6%) | 385 |
0.541 (0.649) |
0.351 (0.508) |
0.3 (0.461) |
0.0617 (0.167) |
0.00661 (0.0323) |
0.156 (0.303) |
0.0857 (0.207) |
0.454 (0.587) |
0.00124 (0.00862) |
0.105 (0.24) |
6p loss | 103 (25%) | 305 |
1e-05 (0.000155) |
0.0233 (0.0829) |
0.079 (0.199) |
0.723 (0.792) |
0.56 (0.661) |
0.0607 (0.165) |
0.234 (0.395) |
0.2 (0.353) |
0.147 (0.292) |
0.263 (0.425) |
8q loss | 38 (9%) | 370 |
0.00033 (0.00318) |
0.448 (0.587) |
0.508 (0.626) |
0.0607 (0.165) |
0.0189 (0.0695) |
0.387 (0.54) |
0.108 (0.244) |
0.0616 (0.167) |
0.533 (0.643) |
0.618 (0.711) |
10p loss | 73 (18%) | 335 |
0.0137 (0.0544) |
0.252 (0.411) |
0.34 (0.497) |
0.878 (0.915) |
0.0161 (0.0613) |
0.138 (0.28) |
0.714 (0.787) |
0.324 (0.484) |
0.199 (0.353) |
0.218 (0.373) |
10q loss | 129 (32%) | 279 |
1e-05 (0.000155) |
0.00203 (0.0128) |
0.345 (0.502) |
0.416 (0.562) |
0.45 (0.587) |
0.556 (0.659) |
0.661 (0.744) |
0.159 (0.306) |
0.122 (0.261) |
0.512 (0.629) |
11q loss | 129 (32%) | 279 |
1e-05 (0.000155) |
0.0525 (0.149) |
0.302 (0.462) |
0.0344 (0.113) |
0.36 (0.516) |
0.154 (0.302) |
0.305 (0.467) |
0.151 (0.297) |
0.291 (0.454) |
0.343 (0.501) |
16p loss | 110 (27%) | 298 |
1e-05 (0.000155) |
0.443 (0.586) |
0.00066 (0.00525) |
0.278 (0.442) |
0.0517 (0.149) |
0.235 (0.395) |
0.24 (0.399) |
0.667 (0.748) |
0.171 (0.321) |
0.127 (0.268) |
1p gain | 89 (22%) | 319 |
1e-05 (0.000155) |
0.103 (0.238) |
0.314 (0.475) |
0.529 (0.64) |
0.251 (0.411) |
0.495 (0.616) |
0.915 (0.944) |
0.636 (0.723) |
0.462 (0.592) |
0.554 (0.659) |
1q gain | 126 (31%) | 282 |
1e-05 (0.000155) |
0.929 (0.949) |
0.594 (0.693) |
0.486 (0.612) |
0.498 (0.618) |
0.841 (0.886) |
0.623 (0.715) |
0.253 (0.412) |
0.152 (0.298) |
0.451 (0.587) |
2q gain | 55 (13%) | 353 |
3e-05 (0.000397) |
0.113 (0.25) |
0.617 (0.711) |
0.556 (0.659) |
0.0926 (0.219) |
0.231 (0.39) |
0.103 (0.238) |
0.188 (0.341) |
0.29 (0.453) |
0.374 (0.526) |
4q gain | 26 (6%) | 382 |
0.024 (0.085) |
0.187 (0.341) |
0.676 (0.753) |
0.552 (0.659) |
0.607 (0.703) |
0.113 (0.25) |
0.069 (0.179) |
0.334 (0.493) |
0.334 (0.493) |
0.383 (0.537) |
6p gain | 73 (18%) | 335 |
1e-05 (0.000155) |
0.884 (0.92) |
0.346 (0.502) |
0.2 (0.353) |
0.297 (0.46) |
0.58 (0.68) |
0.365 (0.519) |
0.525 (0.639) |
0.592 (0.691) |
0.875 (0.912) |
7q gain | 148 (36%) | 260 |
1e-05 (0.000155) |
0.13 (0.271) |
0.0769 (0.196) |
0.755 (0.817) |
0.265 (0.427) |
0.644 (0.731) |
0.669 (0.749) |
0.319 (0.48) |
0.827 (0.876) |
0.716 (0.788) |
12q gain | 91 (22%) | 317 |
0.0619 (0.167) |
0.287 (0.452) |
0.275 (0.44) |
0.786 (0.843) |
0.151 (0.297) |
0.0991 (0.231) |
0.369 (0.522) |
0.364 (0.518) |
0.989 (0.994) |
0.00224 (0.0138) |
13q gain | 100 (25%) | 308 |
0.00072 (0.00568) |
0.808 (0.857) |
0.325 (0.484) |
0.889 (0.921) |
0.17 (0.32) |
0.47 (0.595) |
0.947 (0.961) |
0.794 (0.848) |
0.252 (0.411) |
0.348 (0.504) |
16p gain | 75 (18%) | 333 |
1e-05 (0.000155) |
0.262 (0.425) |
0.582 (0.68) |
0.475 (0.599) |
0.692 (0.765) |
0.128 (0.268) |
0.493 (0.616) |
0.193 (0.347) |
0.399 (0.548) |
0.747 (0.812) |
16q gain | 82 (20%) | 326 |
1e-05 (0.000155) |
0.137 (0.28) |
0.398 (0.547) |
0.283 (0.449) |
0.8 (0.851) |
0.107 (0.244) |
0.509 (0.626) |
0.282 (0.448) |
0.395 (0.545) |
0.474 (0.599) |
17p gain | 56 (14%) | 352 |
0.00106 (0.00776) |
0.206 (0.358) |
0.653 (0.738) |
0.648 (0.734) |
0.536 (0.644) |
0.207 (0.359) |
0.149 (0.296) |
0.125 (0.265) |
0.13 (0.271) |
0.295 (0.458) |
19p gain | 87 (21%) | 321 |
0.00077 (0.00585) |
0.176 (0.328) |
0.0781 (0.198) |
0.466 (0.593) |
0.229 (0.388) |
0.108 (0.244) |
0.367 (0.52) |
0.79 (0.846) |
0.352 (0.509) |
0.784 (0.842) |
20q gain | 230 (56%) | 178 |
1e-05 (0.000155) |
0.137 (0.28) |
0.467 (0.593) |
0.636 (0.723) |
0.39 (0.541) |
0.141 (0.285) |
0.192 (0.346) |
0.149 (0.296) |
0.0927 (0.219) |
0.113 (0.25) |
22q gain | 48 (12%) | 360 |
0.314 (0.475) |
0.0677 (0.177) |
0.745 (0.81) |
0.237 (0.397) |
0.109 (0.245) |
0.0395 (0.124) |
0.0835 (0.204) |
0.646 (0.733) |
0.125 (0.264) |
0.357 (0.514) |
1q loss | 31 (8%) | 377 |
0.0827 (0.203) |
0.247 (0.407) |
0.869 (0.91) |
0.719 (0.791) |
0.891 (0.921) |
0.427 (0.572) |
0.992 (0.996) |
0.923 (0.948) |
0.0465 (0.139) |
0.383 (0.537) |
2p loss | 45 (11%) | 363 |
0.337 (0.494) |
0.0812 (0.201) |
0.691 (0.765) |
0.925 (0.948) |
0.533 (0.643) |
0.0271 (0.0927) |
0.115 (0.253) |
0.943 (0.958) |
0.157 (0.304) |
0.763 (0.825) |
7q loss | 28 (7%) | 380 |
0.00747 (0.0352) |
0.414 (0.562) |
0.451 (0.587) |
0.211 (0.365) |
0.989 (0.994) |
0.726 (0.793) |
0.489 (0.614) |
0.191 (0.345) |
0.599 (0.698) |
0.833 (0.88) |
12q loss | 58 (14%) | 350 |
0.00044 (0.00396) |
0.772 (0.833) |
0.393 (0.543) |
0.214 (0.368) |
0.167 (0.317) |
0.465 (0.593) |
0.66 (0.743) |
0.794 (0.848) |
0.865 (0.907) |
0.683 (0.759) |
17p loss | 182 (45%) | 226 |
1e-05 (0.000155) |
0.454 (0.587) |
0.0872 (0.21) |
0.113 (0.251) |
0.872 (0.912) |
0.0914 (0.217) |
0.3 (0.461) |
0.391 (0.541) |
0.196 (0.348) |
0.353 (0.509) |
18p loss | 98 (24%) | 310 |
0.00012 (0.00137) |
0.117 (0.257) |
0.701 (0.774) |
0.433 (0.575) |
0.077 (0.196) |
0.051 (0.149) |
0.183 (0.338) |
0.336 (0.494) |
0.0695 (0.18) |
0.12 (0.261) |
20q loss | 15 (4%) | 393 |
0.181 (0.336) |
0.919 (0.945) |
0.0522 (0.149) |
0.136 (0.28) |
0.0478 (0.141) |
0.842 (0.887) |
0.753 (0.815) |
1 (1.00) |
0.874 (0.912) |
0.943 (0.958) |
1p loss | 31 (8%) | 377 |
0.103 (0.238) |
0.311 (0.472) |
0.569 (0.669) |
0.386 (0.539) |
0.863 (0.906) |
0.222 (0.375) |
0.789 (0.846) |
0.463 (0.592) |
0.728 (0.793) |
0.287 (0.452) |
7p loss | 20 (5%) | 388 |
0.453 (0.587) |
0.658 (0.742) |
0.657 (0.742) |
0.898 (0.928) |
0.276 (0.441) |
0.415 (0.562) |
0.545 (0.653) |
0.0579 (0.16) |
0.494 (0.616) |
0.501 (0.62) |
17q loss | 46 (11%) | 362 |
0.0887 (0.213) |
0.603 (0.701) |
0.928 (0.949) |
0.265 (0.427) |
0.141 (0.285) |
0.798 (0.851) |
0.685 (0.76) |
0.918 (0.945) |
1 (1.00) |
0.985 (0.993) |
20p loss | 32 (8%) | 376 |
0.105 (0.24) |
0.195 (0.348) |
0.131 (0.272) |
0.236 (0.395) |
0.674 (0.752) |
0.329 (0.488) |
0.38 (0.533) |
0.495 (0.616) |
0.249 (0.409) |
0.458 (0.589) |
xp loss | 73 (18%) | 335 |
0.196 (0.348) |
0.284 (0.449) |
0.361 (0.516) |
0.316 (0.476) |
0.0816 (0.201) |
0.635 (0.723) |
0.84 (0.886) |
0.215 (0.369) |
0.147 (0.292) |
0.12 (0.261) |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
1P GAIN MUTATED | 23 | 44 | 4 | 16 | 2 |
1P GAIN WILD-TYPE | 55 | 102 | 117 | 45 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
1Q GAIN MUTATED | 35 | 58 | 17 | 14 | 2 |
1Q GAIN WILD-TYPE | 43 | 88 | 104 | 47 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
2P GAIN MUTATED | 32 | 60 | 6 | 13 | 0 |
2P GAIN WILD-TYPE | 46 | 86 | 115 | 48 | 2 |
P value = 6e-05 (Fisher's exact test), Q value = 7e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
2P GAIN MUTATED | 31 | 54 | 10 | 16 |
2P GAIN WILD-TYPE | 107 | 73 | 53 | 64 |
P value = 0.0313 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
2P GAIN MUTATED | 17 | 43 | 5 | 24 | 22 |
2P GAIN WILD-TYPE | 55 | 92 | 33 | 79 | 34 |
P value = 0.0102 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
2P GAIN MUTATED | 45 | 25 | 41 |
2P GAIN WILD-TYPE | 73 | 87 | 133 |
P value = 0.00653 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
2P GAIN MUTATED | 21 | 29 | 28 | 12 | 20 |
2P GAIN WILD-TYPE | 84 | 45 | 86 | 13 | 67 |
P value = 0.0179 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
2P GAIN MUTATED | 64 | 33 | 13 |
2P GAIN WILD-TYPE | 202 | 50 | 43 |
P value = 0.00236 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
2P GAIN MUTATED | 19 | 23 | 18 | 37 | 11 |
2P GAIN WILD-TYPE | 68 | 37 | 23 | 95 | 63 |
P value = 3e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
2Q GAIN MUTATED | 16 | 31 | 4 | 4 | 0 |
2Q GAIN WILD-TYPE | 62 | 115 | 117 | 57 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
3P GAIN MUTATED | 44 | 62 | 20 | 17 | 0 |
3P GAIN WILD-TYPE | 34 | 84 | 101 | 44 | 2 |
P value = 0.0156 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
3P GAIN MUTATED | 28 | 56 | 7 | 27 | 23 |
3P GAIN WILD-TYPE | 44 | 79 | 31 | 76 | 33 |
P value = 0.0129 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
3P GAIN MUTATED | 52 | 41 | 48 |
3P GAIN WILD-TYPE | 66 | 71 | 126 |
P value = 0.0486 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
3P GAIN MUTATED | 33 | 37 | 34 | 10 | 28 |
3P GAIN WILD-TYPE | 72 | 37 | 80 | 15 | 59 |
P value = 0.00828 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
3P GAIN MUTATED | 80 | 40 | 22 |
3P GAIN WILD-TYPE | 186 | 43 | 34 |
P value = 0.0199 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
3P GAIN MUTATED | 32 | 32 | 13 | 41 | 20 |
3P GAIN WILD-TYPE | 55 | 28 | 28 | 91 | 54 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
3Q GAIN MUTATED | 50 | 80 | 24 | 23 | 2 |
3Q GAIN WILD-TYPE | 28 | 66 | 97 | 38 | 0 |
P value = 0.00816 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
3Q GAIN MUTATED | 41 | 46 | 43 | 13 | 35 |
3Q GAIN WILD-TYPE | 64 | 28 | 71 | 12 | 52 |
P value = 0.0079 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
3Q GAIN MUTATED | 103 | 48 | 27 |
3Q GAIN WILD-TYPE | 163 | 35 | 29 |
P value = 0.00964 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
3Q GAIN MUTATED | 37 | 39 | 18 | 50 | 29 |
3Q GAIN WILD-TYPE | 50 | 21 | 23 | 82 | 45 |
P value = 0.00053 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
4P GAIN MUTATED | 9 | 24 | 3 | 2 | 0 |
4P GAIN WILD-TYPE | 69 | 122 | 118 | 59 | 2 |
P value = 0.00908 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
4P GAIN MUTATED | 7 | 21 | 3 | 7 |
4P GAIN WILD-TYPE | 131 | 106 | 60 | 73 |
P value = 0.00488 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
4P GAIN MUTATED | 4 | 12 | 16 |
4P GAIN WILD-TYPE | 118 | 102 | 88 |
P value = 0.0437 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
4P GAIN MUTATED | 5 | 19 | 6 | 2 |
4P GAIN WILD-TYPE | 85 | 102 | 92 | 29 |
P value = 0.00974 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
4P GAIN MUTATED | 11 | 18 | 9 |
4P GAIN WILD-TYPE | 107 | 94 | 165 |
P value = 0.0142 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
4P GAIN MUTATED | 7 | 8 | 19 | 0 | 4 |
4P GAIN WILD-TYPE | 98 | 66 | 95 | 25 | 83 |
P value = 0.024 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
4Q GAIN MUTATED | 6 | 16 | 3 | 1 | 0 |
4Q GAIN WILD-TYPE | 72 | 130 | 118 | 60 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
5P GAIN MUTATED | 43 | 70 | 19 | 32 | 2 |
5P GAIN WILD-TYPE | 35 | 76 | 102 | 29 | 0 |
P value = 0.0253 (Fisher's exact test), Q value = 0.088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
5P GAIN MUTATED | 66 | 45 | 18 | 37 |
5P GAIN WILD-TYPE | 72 | 82 | 45 | 43 |
P value = 0.00035 (Fisher's exact test), Q value = 0.0033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
5P GAIN MUTATED | 43 | 32 | 56 |
5P GAIN WILD-TYPE | 79 | 82 | 48 |
P value = 0.00288 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
5P GAIN MUTATED | 27 | 38 | 51 | 15 |
5P GAIN WILD-TYPE | 63 | 83 | 47 | 16 |
P value = 0.00408 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
5P GAIN MUTATED | 27 | 48 | 9 | 57 | 23 |
5P GAIN WILD-TYPE | 45 | 87 | 29 | 46 | 33 |
P value = 0.00055 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
5P GAIN MUTATED | 34 | 41 | 89 |
5P GAIN WILD-TYPE | 84 | 71 | 85 |
P value = 0.0399 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
5P GAIN MUTATED | 46 | 36 | 33 | 12 | 38 |
5P GAIN WILD-TYPE | 59 | 38 | 81 | 13 | 49 |
P value = 0.0246 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
5P GAIN MUTATED | 44 | 21 | 46 | 50 |
5P GAIN WILD-TYPE | 80 | 30 | 81 | 42 |
P value = 0.00454 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
5P GAIN MUTATED | 26 | 27 | 23 | 46 | 39 |
5P GAIN WILD-TYPE | 61 | 33 | 18 | 86 | 35 |
P value = 0.00077 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
5Q GAIN MUTATED | 20 | 17 | 8 | 5 | 1 |
5Q GAIN WILD-TYPE | 58 | 129 | 113 | 56 | 1 |
P value = 0.00215 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
5Q GAIN MUTATED | 8 | 12 | 23 |
5Q GAIN WILD-TYPE | 114 | 102 | 81 |
P value = 0.0356 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
5Q GAIN MUTATED | 5 | 15 | 19 | 4 |
5Q GAIN WILD-TYPE | 85 | 106 | 79 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
6P GAIN MUTATED | 15 | 35 | 6 | 16 | 1 |
6P GAIN WILD-TYPE | 63 | 111 | 115 | 45 | 1 |
P value = 0.00296 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
6Q GAIN MUTATED | 8 | 16 | 5 | 8 | 2 |
6Q GAIN WILD-TYPE | 70 | 130 | 116 | 53 | 0 |
P value = 0.0467 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
6Q GAIN MUTATED | 5 | 7 | 14 | 12 |
6Q GAIN WILD-TYPE | 119 | 44 | 113 | 80 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
7P GAIN MUTATED | 51 | 71 | 17 | 30 | 2 |
7P GAIN WILD-TYPE | 27 | 75 | 104 | 31 | 0 |
P value = 0.0341 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
7P GAIN MUTATED | 62 | 62 | 18 | 29 |
7P GAIN WILD-TYPE | 76 | 65 | 45 | 51 |
P value = 0.00327 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
7P GAIN MUTATED | 41 | 40 | 56 |
7P GAIN WILD-TYPE | 81 | 74 | 48 |
P value = 0.0435 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
7P GAIN MUTATED | 29 | 25 | 15 | 53 | 42 |
7P GAIN WILD-TYPE | 58 | 35 | 26 | 79 | 32 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
7Q GAIN MUTATED | 50 | 60 | 17 | 19 | 2 |
7Q GAIN WILD-TYPE | 28 | 86 | 104 | 42 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
8P GAIN MUTATED | 44 | 26 | 16 | 3 | 1 |
8P GAIN WILD-TYPE | 34 | 120 | 105 | 58 | 1 |
P value = 0.00137 (Fisher's exact test), Q value = 0.0094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
8P GAIN MUTATED | 19 | 22 | 37 |
8P GAIN WILD-TYPE | 103 | 92 | 67 |
P value = 0.0153 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
8P GAIN MUTATED | 68 | 16 | 5 |
8P GAIN WILD-TYPE | 198 | 67 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
8Q GAIN MUTATED | 64 | 72 | 35 | 28 | 1 |
8Q GAIN WILD-TYPE | 14 | 74 | 86 | 33 | 1 |
P value = 0.00388 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
8Q GAIN MUTATED | 61 | 75 | 21 | 43 |
8Q GAIN WILD-TYPE | 77 | 52 | 42 | 37 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
8Q GAIN MUTATED | 52 | 48 | 69 |
8Q GAIN WILD-TYPE | 70 | 66 | 35 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
9P GAIN MUTATED | 19 | 18 | 5 | 26 | 1 |
9P GAIN WILD-TYPE | 59 | 128 | 116 | 35 | 1 |
P value = 0.0166 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
9P GAIN MUTATED | 18 | 11 | 19 | 9 |
9P GAIN WILD-TYPE | 72 | 110 | 79 | 22 |
P value = 0.00971 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
9P GAIN MUTATED | 30 | 9 | 17 | 4 | 9 |
9P GAIN WILD-TYPE | 75 | 65 | 97 | 21 | 78 |
P value = 0.00014 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
9P GAIN MUTATED | 14 | 8 | 14 | 30 |
9P GAIN WILD-TYPE | 110 | 43 | 113 | 62 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
9P GAIN MUTATED | 13 | 8 | 2 | 16 | 27 |
9P GAIN WILD-TYPE | 74 | 52 | 39 | 116 | 47 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
9Q GAIN MUTATED | 11 | 18 | 6 | 20 | 1 |
9Q GAIN WILD-TYPE | 67 | 128 | 115 | 41 | 1 |
P value = 0.00612 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
9Q GAIN MUTATED | 12 | 9 | 19 | 9 |
9Q GAIN WILD-TYPE | 78 | 112 | 79 | 22 |
P value = 0.00203 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
9Q GAIN MUTATED | 7 | 14 | 1 | 26 | 6 |
9Q GAIN WILD-TYPE | 65 | 121 | 37 | 77 | 50 |
P value = 0.00043 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
9Q GAIN MUTATED | 7 | 11 | 36 |
9Q GAIN WILD-TYPE | 111 | 101 | 138 |
P value = 0.0399 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
9Q GAIN MUTATED | 22 | 9 | 10 | 6 | 9 |
9Q GAIN WILD-TYPE | 83 | 65 | 104 | 19 | 78 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
9Q GAIN MUTATED | 11 | 6 | 9 | 27 |
9Q GAIN WILD-TYPE | 113 | 45 | 118 | 65 |
P value = 0.00121 (Fisher's exact test), Q value = 0.0085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
9Q GAIN MUTATED | 10 | 6 | 3 | 12 | 22 |
9Q GAIN WILD-TYPE | 77 | 54 | 38 | 120 | 52 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
10P GAIN MUTATED | 30 | 58 | 8 | 21 | 0 |
10P GAIN WILD-TYPE | 48 | 88 | 113 | 40 | 2 |
P value = 0.00051 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
10P GAIN MUTATED | 34 | 54 | 11 | 18 |
10P GAIN WILD-TYPE | 104 | 73 | 52 | 62 |
P value = 0.0272 (Fisher's exact test), Q value = 0.093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
10P GAIN MUTATED | 22 | 39 | 4 | 29 | 23 |
10P GAIN WILD-TYPE | 50 | 96 | 34 | 74 | 33 |
P value = 0.00483 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
10P GAIN MUTATED | 48 | 26 | 43 |
10P GAIN WILD-TYPE | 70 | 86 | 131 |
P value = 0.00189 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
10Q GAIN MUTATED | 12 | 23 | 3 | 6 | 0 |
10Q GAIN WILD-TYPE | 66 | 123 | 118 | 55 | 2 |
P value = 0.00176 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
10Q GAIN MUTATED | 11 | 25 | 2 | 6 |
10Q GAIN WILD-TYPE | 127 | 102 | 61 | 74 |
P value = 0.00723 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
10Q GAIN MUTATED | 6 | 11 | 11 | 8 | 8 |
10Q GAIN WILD-TYPE | 99 | 63 | 103 | 17 | 79 |
P value = 0.00828 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
11P GAIN MUTATED | 7 | 7 | 4 | 11 | 0 |
11P GAIN WILD-TYPE | 71 | 139 | 117 | 50 | 2 |
P value = 0.00898 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
11P GAIN MUTATED | 4 | 4 | 10 | 6 |
11P GAIN WILD-TYPE | 86 | 117 | 88 | 25 |
P value = 0.0018 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
11P GAIN MUTATED | 1 | 6 | 2 | 17 | 3 |
11P GAIN WILD-TYPE | 71 | 129 | 36 | 86 | 53 |
P value = 0.0122 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
11P GAIN MUTATED | 6 | 3 | 20 |
11P GAIN WILD-TYPE | 112 | 109 | 154 |
P value = 0.00139 (Fisher's exact test), Q value = 0.0094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
11P GAIN MUTATED | 5 | 3 | 5 | 16 |
11P GAIN WILD-TYPE | 119 | 48 | 122 | 76 |
P value = 0.00479 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
11P GAIN MUTATED | 3 | 3 | 2 | 7 | 14 |
11P GAIN WILD-TYPE | 84 | 57 | 39 | 125 | 60 |
P value = 0.00331 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
11Q GAIN MUTATED | 12 | 19 | 4 | 12 | 0 |
11Q GAIN WILD-TYPE | 66 | 127 | 117 | 49 | 2 |
P value = 0.0179 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
11Q GAIN MUTATED | 6 | 13 | 10 | 9 |
11Q GAIN WILD-TYPE | 84 | 108 | 88 | 22 |
P value = 0.00512 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
11Q GAIN MUTATED | 13 | 8 | 7 | 19 |
11Q GAIN WILD-TYPE | 111 | 43 | 120 | 73 |
P value = 0.00094 (Fisher's exact test), Q value = 0.0071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
12P GAIN MUTATED | 32 | 47 | 19 | 18 | 0 |
12P GAIN WILD-TYPE | 46 | 99 | 102 | 43 | 2 |
P value = 0.0389 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
12P GAIN MUTATED | 16 | 22 | 17 | 36 | 23 |
12P GAIN WILD-TYPE | 71 | 38 | 24 | 96 | 51 |
P value = 0.00224 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
12Q GAIN MUTATED | 11 | 20 | 16 | 31 | 12 |
12Q GAIN WILD-TYPE | 76 | 40 | 25 | 101 | 62 |
P value = 0.00072 (Fisher's exact test), Q value = 0.0057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
13Q GAIN MUTATED | 25 | 45 | 14 | 16 | 0 |
13Q GAIN WILD-TYPE | 53 | 101 | 107 | 45 | 2 |
P value = 0.00669 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
14Q GAIN MUTATED | 15 | 21 | 7 | 14 | 0 |
14Q GAIN WILD-TYPE | 63 | 125 | 114 | 47 | 2 |
P value = 0.0254 (Fisher's exact test), Q value = 0.088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
14Q GAIN MUTATED | 23 | 18 | 2 | 14 |
14Q GAIN WILD-TYPE | 115 | 109 | 61 | 66 |
P value = 0.0114 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
14Q GAIN MUTATED | 8 | 9 | 6 | 22 | 10 |
14Q GAIN WILD-TYPE | 64 | 126 | 32 | 81 | 46 |
P value = 0.0296 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
14Q GAIN MUTATED | 11 | 11 | 33 |
14Q GAIN WILD-TYPE | 107 | 101 | 141 |
P value = 0.00134 (Fisher's exact test), Q value = 0.0092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
15Q GAIN MUTATED | 4 | 9 | 11 | 11 |
15Q GAIN WILD-TYPE | 134 | 118 | 52 | 69 |
P value = 0.00062 (Fisher's exact test), Q value = 0.0051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
15Q GAIN MUTATED | 2 | 16 | 11 |
15Q GAIN WILD-TYPE | 120 | 98 | 93 |
P value = 0.0319 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
15Q GAIN MUTATED | 14 | 13 | 8 |
15Q GAIN WILD-TYPE | 104 | 99 | 166 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
16P GAIN MUTATED | 12 | 45 | 10 | 6 | 2 |
16P GAIN WILD-TYPE | 66 | 101 | 111 | 55 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
16Q GAIN MUTATED | 12 | 51 | 10 | 8 | 1 |
16Q GAIN WILD-TYPE | 66 | 95 | 111 | 53 | 1 |
P value = 0.00106 (Fisher's exact test), Q value = 0.0078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
17P GAIN MUTATED | 11 | 26 | 5 | 14 | 0 |
17P GAIN WILD-TYPE | 67 | 120 | 116 | 47 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
17Q GAIN MUTATED | 44 | 53 | 21 | 17 | 0 |
17Q GAIN WILD-TYPE | 34 | 93 | 100 | 44 | 2 |
P value = 0.0444 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
17Q GAIN MUTATED | 35 | 34 | 45 |
17Q GAIN WILD-TYPE | 87 | 80 | 59 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
18P GAIN MUTATED | 26 | 58 | 6 | 26 | 0 |
18P GAIN WILD-TYPE | 52 | 88 | 115 | 35 | 2 |
P value = 0.00762 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
18P GAIN MUTATED | 42 | 45 | 8 | 21 |
18P GAIN WILD-TYPE | 96 | 82 | 55 | 59 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
18P GAIN MUTATED | 21 | 28 | 3 | 37 | 27 |
18P GAIN WILD-TYPE | 51 | 107 | 35 | 66 | 29 |
P value = 0.0293 (Fisher's exact test), Q value = 0.099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
18P GAIN MUTATED | 29 | 25 | 62 |
18P GAIN WILD-TYPE | 89 | 87 | 112 |
P value = 0.00031 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
18P GAIN MUTATED | 37 | 17 | 24 | 16 | 21 |
18P GAIN WILD-TYPE | 68 | 57 | 90 | 9 | 66 |
P value = 0.0385 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
18P GAIN MUTATED | 16 | 16 | 16 | 36 | 28 |
18P GAIN WILD-TYPE | 71 | 44 | 25 | 96 | 46 |
P value = 0.0069 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
18Q GAIN MUTATED | 13 | 29 | 7 | 12 | 0 |
18Q GAIN WILD-TYPE | 65 | 117 | 114 | 49 | 2 |
P value = 0.0463 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
18Q GAIN MUTATED | 11 | 18 | 3 | 12 | 16 |
18Q GAIN WILD-TYPE | 61 | 117 | 35 | 91 | 40 |
P value = 0.0423 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
18Q GAIN MUTATED | 20 | 8 | 16 | 8 | 8 |
18Q GAIN WILD-TYPE | 85 | 66 | 98 | 17 | 79 |
P value = 0.00284 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
18Q GAIN MUTATED | 5 | 9 | 12 | 16 | 16 |
18Q GAIN WILD-TYPE | 82 | 51 | 29 | 116 | 58 |
P value = 0.00077 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
19P GAIN MUTATED | 19 | 44 | 13 | 10 | 1 |
19P GAIN WILD-TYPE | 59 | 102 | 108 | 51 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
19Q GAIN MUTATED | 30 | 71 | 16 | 14 | 1 |
19Q GAIN WILD-TYPE | 48 | 75 | 105 | 47 | 1 |
P value = 0.025 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
19Q GAIN MUTATED | 32 | 50 | 20 | 30 |
19Q GAIN WILD-TYPE | 106 | 77 | 43 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
20P GAIN MUTATED | 53 | 83 | 31 | 33 | 1 |
20P GAIN WILD-TYPE | 25 | 63 | 90 | 28 | 1 |
P value = 0.0414 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
20P GAIN MUTATED | 69 | 47 | 84 |
20P GAIN WILD-TYPE | 49 | 65 | 90 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
20Q GAIN MUTATED | 59 | 98 | 36 | 36 | 1 |
20Q GAIN WILD-TYPE | 19 | 48 | 85 | 25 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
21Q GAIN MUTATED | 29 | 64 | 9 | 13 | 1 |
21Q GAIN WILD-TYPE | 49 | 82 | 112 | 48 | 1 |
P value = 3e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
21Q GAIN MUTATED | 25 | 56 | 14 | 21 |
21Q GAIN WILD-TYPE | 113 | 71 | 49 | 59 |
P value = 0.00074 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
21Q GAIN MUTATED | 49 | 31 | 36 |
21Q GAIN WILD-TYPE | 69 | 81 | 138 |
P value = 0.00167 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
21Q GAIN MUTATED | 18 | 34 | 31 | 6 | 25 |
21Q GAIN WILD-TYPE | 87 | 40 | 83 | 19 | 62 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
21Q GAIN MUTATED | 59 | 37 | 18 |
21Q GAIN WILD-TYPE | 207 | 46 | 38 |
P value = 0.00424 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
21Q GAIN MUTATED | 40 | 22 | 35 | 15 |
21Q GAIN WILD-TYPE | 84 | 29 | 92 | 77 |
P value = 0.0112 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
21Q GAIN MUTATED | 22 | 26 | 14 | 38 | 12 |
21Q GAIN WILD-TYPE | 65 | 34 | 27 | 94 | 62 |
P value = 0.0395 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
22Q GAIN MUTATED | 16 | 19 | 13 |
22Q GAIN WILD-TYPE | 102 | 93 | 161 |
P value = 0.00617 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
XP GAIN MUTATED | 19 | 25 | 9 | 11 | 1 |
XP GAIN WILD-TYPE | 59 | 121 | 112 | 50 | 1 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
XP GAIN MUTATED | 8 | 31 | 10 | 16 |
XP GAIN WILD-TYPE | 130 | 96 | 53 | 64 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
XP GAIN MUTATED | 7 | 23 | 24 |
XP GAIN WILD-TYPE | 115 | 91 | 80 |
P value = 0.00879 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
XP GAIN MUTATED | 7 | 28 | 17 | 2 |
XP GAIN WILD-TYPE | 83 | 93 | 81 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
XP GAIN MUTATED | 2 | 27 | 4 | 12 | 20 |
XP GAIN WILD-TYPE | 70 | 108 | 34 | 91 | 36 |
P value = 0.0381 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
XP GAIN MUTATED | 25 | 21 | 19 |
XP GAIN WILD-TYPE | 93 | 91 | 155 |
P value = 0.0422 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
XP GAIN MUTATED | 16 | 17 | 18 | 7 | 7 |
XP GAIN WILD-TYPE | 89 | 57 | 96 | 18 | 80 |
P value = 0.0436 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
XP GAIN MUTATED | 42 | 19 | 4 |
XP GAIN WILD-TYPE | 224 | 64 | 52 |
P value = 0.0153 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
XP GAIN MUTATED | 13 | 13 | 28 | 11 |
XP GAIN WILD-TYPE | 111 | 38 | 99 | 81 |
P value = 0.0382 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
XP GAIN MUTATED | 7 | 14 | 7 | 28 | 9 |
XP GAIN WILD-TYPE | 80 | 46 | 34 | 104 | 65 |
P value = 0.0228 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
XQ GAIN MUTATED | 8 | 15 | 19 |
XQ GAIN WILD-TYPE | 114 | 99 | 85 |
P value = 0.044 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
XQ GAIN MUTATED | 2 | 16 | 3 | 14 | 10 |
XQ GAIN WILD-TYPE | 70 | 119 | 35 | 89 | 46 |
P value = 0.0309 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
XQ GAIN MUTATED | 33 | 11 | 1 |
XQ GAIN WILD-TYPE | 233 | 72 | 55 |
P value = 0.0465 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
1Q LOSS MUTATED | 12 | 0 | 13 | 5 |
1Q LOSS WILD-TYPE | 112 | 51 | 114 | 87 |
P value = 0.0271 (Fisher's exact test), Q value = 0.093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
2P LOSS MUTATED | 14 | 18 | 11 |
2P LOSS WILD-TYPE | 104 | 94 | 163 |
P value = 0.00064 (Fisher's exact test), Q value = 0.0051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
2Q LOSS MUTATED | 24 | 38 | 12 | 17 | 1 |
2Q LOSS WILD-TYPE | 54 | 108 | 109 | 44 | 1 |
P value = 0.00585 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
2Q LOSS MUTATED | 22 | 42 | 10 | 18 |
2Q LOSS WILD-TYPE | 116 | 85 | 53 | 62 |
P value = 0.0106 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
2Q LOSS MUTATED | 17 | 41 | 4 | 14 | 14 |
2Q LOSS WILD-TYPE | 55 | 94 | 34 | 89 | 42 |
P value = 0.0266 (Fisher's exact test), Q value = 0.091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
2Q LOSS MUTATED | 30 | 32 | 28 |
2Q LOSS WILD-TYPE | 88 | 80 | 146 |
P value = 0.0364 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
2Q LOSS MUTATED | 24 | 12 | 38 | 13 |
2Q LOSS WILD-TYPE | 100 | 39 | 89 | 79 |
P value = 0.043 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
3P LOSS MUTATED | 9 | 25 | 8 | 8 | 1 |
3P LOSS WILD-TYPE | 69 | 121 | 113 | 53 | 1 |
P value = 0.0083 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
3P LOSS MUTATED | 27 | 9 | 4 | 11 |
3P LOSS WILD-TYPE | 111 | 118 | 59 | 69 |
P value = 0.0167 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
3P LOSS MUTATED | 17 | 8 | 21 |
3P LOSS WILD-TYPE | 105 | 106 | 83 |
P value = 0.00661 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
3P LOSS MUTATED | 13 | 7 | 20 | 6 |
3P LOSS WILD-TYPE | 77 | 114 | 78 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
3P LOSS MUTATED | 1 | 7 | 8 | 26 | 8 |
3P LOSS WILD-TYPE | 71 | 128 | 30 | 77 | 48 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
3P LOSS MUTATED | 4 | 7 | 39 |
3P LOSS WILD-TYPE | 114 | 105 | 135 |
P value = 0.014 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
3P LOSS MUTATED | 24 | 7 | 10 | 3 | 7 |
3P LOSS WILD-TYPE | 81 | 67 | 104 | 22 | 80 |
P value = 6e-05 (Fisher's exact test), Q value = 7e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
3P LOSS MUTATED | 7 | 4 | 13 | 25 |
3P LOSS WILD-TYPE | 117 | 47 | 114 | 67 |
P value = 0.00968 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
3P LOSS MUTATED | 5 | 4 | 7 | 16 | 17 |
3P LOSS WILD-TYPE | 82 | 56 | 34 | 116 | 57 |
P value = 0.00661 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
3Q LOSS MUTATED | 1 | 5 | 0 | 13 | 3 |
3Q LOSS WILD-TYPE | 71 | 130 | 38 | 90 | 53 |
P value = 0.00124 (Fisher's exact test), Q value = 0.0086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
3Q LOSS MUTATED | 1 | 3 | 6 | 12 |
3Q LOSS WILD-TYPE | 123 | 48 | 121 | 80 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
4P LOSS MUTATED | 35 | 64 | 11 | 33 | 1 |
4P LOSS WILD-TYPE | 43 | 82 | 110 | 28 | 1 |
P value = 0.00332 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
4P LOSS MUTATED | 42 | 32 | 39 | 6 |
4P LOSS WILD-TYPE | 48 | 89 | 59 | 25 |
P value = 0.00526 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
4P LOSS MUTATED | 24 | 38 | 8 | 50 | 22 |
4P LOSS WILD-TYPE | 48 | 97 | 30 | 53 | 34 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
4P LOSS MUTATED | 49 | 20 | 73 |
4P LOSS WILD-TYPE | 69 | 92 | 101 |
P value = 0.00042 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
4P LOSS MUTATED | 42 | 31 | 23 | 15 | 32 |
4P LOSS WILD-TYPE | 63 | 43 | 91 | 10 | 55 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
4Q LOSS MUTATED | 33 | 61 | 8 | 33 | 1 |
4Q LOSS WILD-TYPE | 45 | 85 | 113 | 28 | 1 |
P value = 0.0114 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
4Q LOSS MUTATED | 39 | 32 | 35 | 5 |
4Q LOSS WILD-TYPE | 51 | 89 | 63 | 26 |
P value = 0.00514 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
4Q LOSS MUTATED | 21 | 40 | 6 | 48 | 19 |
4Q LOSS WILD-TYPE | 51 | 95 | 32 | 55 | 37 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
4Q LOSS MUTATED | 46 | 21 | 67 |
4Q LOSS WILD-TYPE | 72 | 91 | 107 |
P value = 0.00555 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
4Q LOSS MUTATED | 42 | 25 | 24 | 13 | 32 |
4Q LOSS WILD-TYPE | 63 | 49 | 90 | 12 | 55 |
P value = 0.0101 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
4Q LOSS MUTATED | 47 | 15 | 29 | 39 |
4Q LOSS WILD-TYPE | 77 | 36 | 98 | 53 |
P value = 0.00114 (Fisher's exact test), Q value = 0.0083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
5P LOSS MUTATED | 12 | 31 | 6 | 5 | 0 |
5P LOSS WILD-TYPE | 66 | 115 | 115 | 56 | 2 |
P value = 0.00015 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
5P LOSS MUTATED | 16 | 29 | 7 | 2 |
5P LOSS WILD-TYPE | 122 | 98 | 56 | 78 |
P value = 0.00221 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
5P LOSS MUTATED | 23 | 16 | 6 | 4 |
5P LOSS WILD-TYPE | 67 | 105 | 92 | 27 |
P value = 0.00049 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
5P LOSS MUTATED | 28 | 13 | 13 |
5P LOSS WILD-TYPE | 90 | 99 | 161 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
5Q LOSS MUTATED | 38 | 80 | 15 | 27 | 0 |
5Q LOSS WILD-TYPE | 40 | 66 | 106 | 34 | 2 |
P value = 0.00172 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
5Q LOSS MUTATED | 54 | 64 | 14 | 28 |
5Q LOSS WILD-TYPE | 84 | 63 | 49 | 52 |
P value = 0.0203 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
5Q LOSS MUTATED | 59 | 39 | 61 |
5Q LOSS WILD-TYPE | 59 | 73 | 113 |
P value = 0.0468 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
5Q LOSS MUTATED | 34 | 36 | 41 | 15 | 34 |
5Q LOSS WILD-TYPE | 71 | 38 | 73 | 10 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
6P LOSS MUTATED | 35 | 50 | 6 | 12 | 0 |
6P LOSS WILD-TYPE | 43 | 96 | 115 | 49 | 2 |
P value = 0.0233 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
6P LOSS MUTATED | 24 | 43 | 16 | 20 |
6P LOSS WILD-TYPE | 114 | 84 | 47 | 60 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
6Q LOSS MUTATED | 48 | 83 | 10 | 18 | 0 |
6Q LOSS WILD-TYPE | 30 | 63 | 111 | 43 | 2 |
P value = 0.00892 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
6Q LOSS MUTATED | 42 | 64 | 22 | 31 |
6Q LOSS WILD-TYPE | 96 | 63 | 41 | 49 |
P value = 0.018 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
6Q LOSS MUTATED | 40 | 37 | 51 |
6Q LOSS WILD-TYPE | 82 | 77 | 53 |
P value = 0.0354 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
6Q LOSS MUTATED | 57 | 43 | 58 |
6Q LOSS WILD-TYPE | 61 | 69 | 116 |
P value = 0.00747 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
7Q LOSS MUTATED | 3 | 15 | 2 | 8 | 0 |
7Q LOSS WILD-TYPE | 75 | 131 | 119 | 53 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
8P LOSS MUTATED | 16 | 102 | 25 | 44 | 1 |
8P LOSS WILD-TYPE | 62 | 44 | 96 | 17 | 1 |
P value = 0.00383 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
8P LOSS MUTATED | 69 | 69 | 18 | 32 |
8P LOSS WILD-TYPE | 69 | 58 | 45 | 48 |
P value = 0.0137 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
8P LOSS MUTATED | 68 | 42 | 46 |
8P LOSS WILD-TYPE | 54 | 72 | 58 |
P value = 0.00098 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
8P LOSS MUTATED | 49 | 38 | 52 | 17 |
8P LOSS WILD-TYPE | 41 | 83 | 46 | 14 |
P value = 0.00279 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
8P LOSS MUTATED | 37 | 54 | 10 | 61 | 26 |
8P LOSS WILD-TYPE | 35 | 81 | 28 | 42 | 30 |
P value = 0.00578 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
8P LOSS MUTATED | 63 | 38 | 87 |
8P LOSS WILD-TYPE | 55 | 74 | 87 |
P value = 0.037 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
8P LOSS MUTATED | 110 | 46 | 30 |
8P LOSS WILD-TYPE | 156 | 37 | 26 |
P value = 0.00033 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
8Q LOSS MUTATED | 1 | 25 | 6 | 6 | 0 |
8Q LOSS WILD-TYPE | 77 | 121 | 115 | 55 | 2 |
P value = 0.0189 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
8Q LOSS MUTATED | 11 | 5 | 2 | 13 | 7 |
8Q LOSS WILD-TYPE | 61 | 130 | 36 | 90 | 49 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
9P LOSS MUTATED | 34 | 85 | 51 | 4 | 0 |
9P LOSS WILD-TYPE | 44 | 61 | 70 | 57 | 2 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
9P LOSS MUTATED | 38 | 65 | 30 | 41 |
9P LOSS WILD-TYPE | 100 | 62 | 33 | 39 |
P value = 0.00322 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
9P LOSS MUTATED | 40 | 62 | 42 |
9P LOSS WILD-TYPE | 82 | 52 | 62 |
P value = 0.00017 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
9P LOSS MUTATED | 37 | 69 | 29 | 9 |
9P LOSS WILD-TYPE | 53 | 52 | 69 | 22 |
P value = 6e-05 (Fisher's exact test), Q value = 7e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
9P LOSS MUTATED | 31 | 66 | 27 | 27 | 23 |
9P LOSS WILD-TYPE | 41 | 69 | 11 | 76 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
9P LOSS MUTATED | 63 | 59 | 52 |
9P LOSS WILD-TYPE | 55 | 53 | 122 |
P value = 0.00702 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
9P LOSS MUTATED | 30 | 38 | 58 | 11 | 37 |
9P LOSS WILD-TYPE | 75 | 36 | 56 | 14 | 50 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
9P LOSS MUTATED | 55 | 25 | 69 | 21 |
9P LOSS WILD-TYPE | 69 | 26 | 58 | 71 |
P value = 0.00043 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
9P LOSS MUTATED | 31 | 31 | 23 | 67 | 18 |
9P LOSS WILD-TYPE | 56 | 29 | 18 | 65 | 56 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
9Q LOSS MUTATED | 38 | 76 | 51 | 4 | 0 |
9Q LOSS WILD-TYPE | 40 | 70 | 70 | 57 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
9Q LOSS MUTATED | 34 | 61 | 32 | 42 |
9Q LOSS WILD-TYPE | 104 | 66 | 31 | 38 |
P value = 5e-04 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
9Q LOSS MUTATED | 42 | 64 | 34 |
9Q LOSS WILD-TYPE | 80 | 50 | 70 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
9Q LOSS MUTATED | 40 | 71 | 22 | 7 |
9Q LOSS WILD-TYPE | 50 | 50 | 76 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
9Q LOSS MUTATED | 32 | 69 | 27 | 19 | 22 |
9Q LOSS WILD-TYPE | 40 | 66 | 11 | 84 | 34 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
9Q LOSS MUTATED | 62 | 64 | 43 |
9Q LOSS WILD-TYPE | 56 | 48 | 131 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
9Q LOSS MUTATED | 24 | 33 | 64 | 11 | 37 |
9Q LOSS WILD-TYPE | 81 | 41 | 50 | 14 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
9Q LOSS MUTATED | 52 | 27 | 73 | 14 |
9Q LOSS WILD-TYPE | 72 | 24 | 54 | 78 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
9Q LOSS MUTATED | 33 | 32 | 21 | 69 | 11 |
9Q LOSS WILD-TYPE | 54 | 28 | 20 | 63 | 63 |
P value = 0.0137 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
10P LOSS MUTATED | 18 | 32 | 11 | 11 | 1 |
10P LOSS WILD-TYPE | 60 | 114 | 110 | 50 | 1 |
P value = 0.0161 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
10P LOSS MUTATED | 5 | 20 | 10 | 24 | 12 |
10P LOSS WILD-TYPE | 67 | 115 | 28 | 79 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
10Q LOSS MUTATED | 37 | 57 | 11 | 23 | 1 |
10Q LOSS WILD-TYPE | 41 | 89 | 110 | 38 | 1 |
P value = 0.00203 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
10Q LOSS MUTATED | 30 | 53 | 16 | 30 |
10Q LOSS WILD-TYPE | 108 | 74 | 47 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
11P LOSS MUTATED | 42 | 91 | 31 | 12 | 2 |
11P LOSS WILD-TYPE | 36 | 55 | 90 | 49 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
11P LOSS MUTATED | 33 | 71 | 34 | 40 |
11P LOSS WILD-TYPE | 105 | 56 | 29 | 40 |
P value = 0.00012 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
11P LOSS MUTATED | 43 | 68 | 29 | 8 |
11P LOSS WILD-TYPE | 47 | 53 | 69 | 23 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
11P LOSS MUTATED | 29 | 74 | 21 | 27 | 25 |
11P LOSS WILD-TYPE | 43 | 61 | 17 | 76 | 31 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
11P LOSS MUTATED | 62 | 62 | 52 |
11P LOSS WILD-TYPE | 56 | 50 | 122 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
11P LOSS MUTATED | 25 | 39 | 65 | 11 | 37 |
11P LOSS WILD-TYPE | 80 | 35 | 49 | 14 | 50 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
11P LOSS MUTATED | 58 | 26 | 68 | 20 |
11P LOSS WILD-TYPE | 66 | 25 | 59 | 72 |
P value = 0.00195 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
11P LOSS MUTATED | 34 | 33 | 22 | 64 | 19 |
11P LOSS WILD-TYPE | 53 | 27 | 19 | 68 | 55 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
11Q LOSS MUTATED | 36 | 60 | 17 | 14 | 2 |
11Q LOSS WILD-TYPE | 42 | 86 | 104 | 47 | 0 |
P value = 0.0344 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
11Q LOSS MUTATED | 34 | 42 | 26 | 4 |
11Q LOSS WILD-TYPE | 56 | 79 | 72 | 27 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
12P LOSS MUTATED | 8 | 29 | 5 | 11 | 1 |
12P LOSS WILD-TYPE | 70 | 117 | 116 | 50 | 1 |
P value = 0.0161 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
12P LOSS MUTATED | 11 | 25 | 11 | 7 |
12P LOSS WILD-TYPE | 127 | 102 | 52 | 73 |
P value = 0.025 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
12P LOSS MUTATED | 14 | 24 | 2 | 7 | 6 |
12P LOSS WILD-TYPE | 58 | 111 | 36 | 96 | 50 |
P value = 0.022 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
12P LOSS MUTATED | 24 | 13 | 16 |
12P LOSS WILD-TYPE | 94 | 99 | 158 |
P value = 0.00044 (Fisher's exact test), Q value = 0.004
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
12Q LOSS MUTATED | 12 | 26 | 5 | 15 | 0 |
12Q LOSS WILD-TYPE | 66 | 120 | 116 | 46 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
13Q LOSS MUTATED | 25 | 32 | 7 | 19 | 2 |
13Q LOSS WILD-TYPE | 53 | 114 | 114 | 42 | 0 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
13Q LOSS MUTATED | 20 | 16 | 37 |
13Q LOSS WILD-TYPE | 102 | 98 | 67 |
P value = 0.00057 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
13Q LOSS MUTATED | 9 | 18 | 6 | 30 | 20 |
13Q LOSS WILD-TYPE | 63 | 117 | 32 | 73 | 36 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
13Q LOSS MUTATED | 32 | 20 | 14 | 10 | 9 |
13Q LOSS WILD-TYPE | 73 | 54 | 100 | 15 | 78 |
P value = 0.012 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
13Q LOSS MUTATED | 60 | 21 | 4 |
13Q LOSS WILD-TYPE | 206 | 62 | 52 |
P value = 0.00939 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
13Q LOSS MUTATED | 18 | 13 | 23 | 30 |
13Q LOSS WILD-TYPE | 106 | 38 | 104 | 62 |
P value = 0.00119 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
13Q LOSS MUTATED | 10 | 17 | 7 | 23 | 27 |
13Q LOSS WILD-TYPE | 77 | 43 | 34 | 109 | 47 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
14Q LOSS MUTATED | 25 | 73 | 9 | 14 | 0 |
14Q LOSS WILD-TYPE | 53 | 73 | 112 | 47 | 2 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
14Q LOSS MUTATED | 36 | 55 | 20 | 10 |
14Q LOSS WILD-TYPE | 102 | 72 | 43 | 70 |
P value = 0.00019 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
14Q LOSS MUTATED | 52 | 30 | 38 |
14Q LOSS WILD-TYPE | 66 | 82 | 136 |
P value = 0.00075 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
14Q LOSS MUTATED | 21 | 36 | 28 | 9 | 26 |
14Q LOSS WILD-TYPE | 84 | 38 | 86 | 16 | 61 |
P value = 0.00119 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
14Q LOSS MUTATED | 65 | 38 | 17 |
14Q LOSS WILD-TYPE | 201 | 45 | 39 |
P value = 0.0036 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
14Q LOSS MUTATED | 45 | 23 | 31 | 19 |
14Q LOSS WILD-TYPE | 79 | 28 | 96 | 73 |
P value = 0.00115 (Fisher's exact test), Q value = 0.0083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
14Q LOSS MUTATED | 24 | 30 | 16 | 34 | 14 |
14Q LOSS WILD-TYPE | 63 | 30 | 25 | 98 | 60 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
15Q LOSS MUTATED | 31 | 74 | 7 | 31 | 1 |
15Q LOSS WILD-TYPE | 47 | 72 | 114 | 30 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
15Q LOSS MUTATED | 59 | 57 | 7 | 21 |
15Q LOSS WILD-TYPE | 79 | 70 | 56 | 59 |
P value = 0.00543 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
15Q LOSS MUTATED | 25 | 42 | 5 | 45 | 24 |
15Q LOSS WILD-TYPE | 47 | 93 | 33 | 58 | 32 |
P value = 0.023 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
15Q LOSS MUTATED | 38 | 37 | 30 | 10 | 29 |
15Q LOSS WILD-TYPE | 67 | 37 | 84 | 15 | 58 |
P value = 0.00929 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
15Q LOSS MUTATED | 88 | 41 | 15 |
15Q LOSS WILD-TYPE | 178 | 42 | 41 |
P value = 0.0102 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
15Q LOSS MUTATED | 37 | 27 | 38 | 38 |
15Q LOSS WILD-TYPE | 87 | 24 | 89 | 54 |
P value = 0.0233 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
15Q LOSS MUTATED | 24 | 30 | 14 | 40 | 32 |
15Q LOSS WILD-TYPE | 63 | 30 | 27 | 92 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
16P LOSS MUTATED | 35 | 36 | 2 | 37 | 0 |
16P LOSS WILD-TYPE | 43 | 110 | 119 | 24 | 2 |
P value = 0.00066 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
16P LOSS MUTATED | 35 | 18 | 40 |
16P LOSS WILD-TYPE | 87 | 96 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
16Q LOSS MUTATED | 38 | 34 | 2 | 33 | 0 |
16Q LOSS WILD-TYPE | 40 | 112 | 119 | 28 | 2 |
P value = 0.0148 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
16Q LOSS MUTATED | 34 | 20 | 36 |
16Q LOSS WILD-TYPE | 88 | 94 | 68 |
P value = 0.0417 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
16Q LOSS MUTATED | 20 | 33 | 5 | 26 | 23 |
16Q LOSS WILD-TYPE | 52 | 102 | 33 | 77 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
17P LOSS MUTATED | 52 | 84 | 29 | 16 | 1 |
17P LOSS WILD-TYPE | 26 | 62 | 92 | 45 | 1 |
P value = 0.00012 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
18P LOSS MUTATED | 25 | 45 | 18 | 8 | 2 |
18P LOSS WILD-TYPE | 53 | 101 | 103 | 53 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
18Q LOSS MUTATED | 35 | 67 | 20 | 22 | 2 |
18Q LOSS WILD-TYPE | 43 | 79 | 101 | 39 | 0 |
P value = 0.0472 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
18Q LOSS MUTATED | 53 | 35 | 56 |
18Q LOSS WILD-TYPE | 65 | 77 | 118 |
P value = 0.0375 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
18Q LOSS MUTATED | 32 | 38 | 35 | 9 | 32 |
18Q LOSS WILD-TYPE | 73 | 36 | 79 | 16 | 55 |
P value = 0.00385 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
18Q LOSS MUTATED | 86 | 43 | 17 |
18Q LOSS WILD-TYPE | 180 | 40 | 39 |
P value = 3e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
19P LOSS MUTATED | 25 | 43 | 11 | 15 | 1 |
19P LOSS WILD-TYPE | 53 | 103 | 110 | 46 | 1 |
P value = 0.00193 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
19P LOSS MUTATED | 17 | 19 | 6 | 29 | 22 |
19P LOSS WILD-TYPE | 55 | 116 | 32 | 74 | 34 |
P value = 0.00486 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
19P LOSS MUTATED | 33 | 14 | 46 |
19P LOSS WILD-TYPE | 85 | 98 | 128 |
P value = 0.00095 (Fisher's exact test), Q value = 0.0071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
19Q LOSS MUTATED | 16 | 20 | 7 | 15 | 1 |
19Q LOSS WILD-TYPE | 62 | 126 | 114 | 46 | 1 |
P value = 0.0365 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
19Q LOSS MUTATED | 20 | 8 | 18 |
19Q LOSS WILD-TYPE | 102 | 106 | 86 |
P value = 0.00687 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
19Q LOSS MUTATED | 9 | 13 | 1 | 21 | 13 |
19Q LOSS WILD-TYPE | 63 | 122 | 37 | 82 | 43 |
P value = 0.0478 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
20Q LOSS MUTATED | 3 | 1 | 2 | 4 | 5 |
20Q LOSS WILD-TYPE | 69 | 134 | 36 | 99 | 51 |
P value = 0.0175 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
21Q LOSS MUTATED | 16 | 32 | 13 | 17 | 1 |
21Q LOSS WILD-TYPE | 62 | 114 | 108 | 44 | 1 |
P value = 0.0136 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
21Q LOSS MUTATED | 23 | 13 | 28 |
21Q LOSS WILD-TYPE | 99 | 101 | 76 |
P value = 0.0265 (Fisher's exact test), Q value = 0.091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
21Q LOSS MUTATED | 17 | 14 | 27 | 6 |
21Q LOSS WILD-TYPE | 73 | 107 | 71 | 25 |
P value = 0.00657 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
21Q LOSS MUTATED | 14 | 19 | 46 |
21Q LOSS WILD-TYPE | 104 | 93 | 128 |
P value = 0.003 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
21Q LOSS MUTATED | 33 | 8 | 18 | 7 | 13 |
21Q LOSS WILD-TYPE | 72 | 66 | 96 | 18 | 74 |
P value = 0.0112 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
21Q LOSS MUTATED | 20 | 6 | 21 | 29 |
21Q LOSS WILD-TYPE | 104 | 45 | 106 | 63 |
P value = 0.0083 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
21Q LOSS MUTATED | 16 | 8 | 6 | 20 | 26 |
21Q LOSS WILD-TYPE | 71 | 52 | 35 | 112 | 48 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
22Q LOSS MUTATED | 36 | 75 | 9 | 40 | 0 |
22Q LOSS WILD-TYPE | 42 | 71 | 112 | 21 | 2 |
P value = 0.0106 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
22Q LOSS MUTATED | 64 | 49 | 14 | 33 |
22Q LOSS WILD-TYPE | 74 | 78 | 49 | 47 |
P value = 0.00058 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
22Q LOSS MUTATED | 47 | 32 | 44 | 9 |
22Q LOSS WILD-TYPE | 43 | 89 | 54 | 22 |
P value = 0.00437 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
22Q LOSS MUTATED | 27 | 42 | 10 | 55 | 23 |
22Q LOSS WILD-TYPE | 45 | 93 | 28 | 48 | 33 |
P value = 0.00064 (Fisher's exact test), Q value = 0.0051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
22Q LOSS MUTATED | 44 | 29 | 84 |
22Q LOSS WILD-TYPE | 74 | 83 | 90 |
P value = 0.0373 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
22Q LOSS MUTATED | 49 | 15 | 44 | 47 |
22Q LOSS WILD-TYPE | 75 | 36 | 83 | 45 |
P value = 0.0091 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
XQ LOSS MUTATED | 16 | 32 | 13 | 22 |
XQ LOSS WILD-TYPE | 122 | 95 | 50 | 58 |
P value = 0.0212 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
XQ LOSS MUTATED | 11 | 26 | 14 | 15 | 16 |
XQ LOSS WILD-TYPE | 61 | 109 | 24 | 88 | 40 |
P value = 0.0161 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
XQ LOSS MUTATED | 20 | 11 | 37 | 12 |
XQ LOSS WILD-TYPE | 104 | 40 | 90 | 80 |
P value = 0.0339 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
XQ LOSS MUTATED | 11 | 13 | 7 | 38 | 11 |
XQ LOSS WILD-TYPE | 76 | 47 | 34 | 94 | 63 |
-
Copy number data file = broad_values_by_arm.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/BLCA-TP/22507732/transformed.cor.cli.txt
-
Molecular subtypes file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/BLCA-TP/22541056/BLCA-TP.transferedmergedcluster.txt
-
Number of patients = 408
-
Number of significantly arm-level cnvs = 82
-
Number of molecular subtypes = 10
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.