This pipeline computes the correlation between significant copy number variation (cnv focal) genes and molecular subtypes.
Testing the association between copy number variation 73 focal events and 10 molecular subtypes across 408 patients, 331 significant findings detected with P value < 0.05 and Q value < 0.25.
-
amp_1p34.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
amp_1q21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_1q23.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_2p25.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_3p25.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_3q26.33 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
-
amp_4p16.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_4q13.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_5p15.33 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_6p22.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
-
amp_6q21 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
-
amp_6q23.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
amp_7p21.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
amp_7p11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'RPPA_CNMF'.
-
amp_8p11.23 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
-
amp_8p11.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
amp_8q22.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
-
amp_8q24.21 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
amp_9p24.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_10p14 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
amp_11p13 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_11q13.3 cnv correlated to 'CN_CNMF'.
-
amp_11q22.2 cnv correlated to 'CN_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_12p12.1 cnv correlated to 'CN_CNMF' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_12q15 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_13q22.1 cnv correlated to 'CN_CNMF'.
-
amp_16p13.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
-
amp_16p11.2 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
-
amp_16q22.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
-
amp_17p11.2 cnv correlated to 'CN_CNMF'.
-
amp_17q11.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_17q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_17q23.3 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
-
amp_19q12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
amp_19q13.43 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MIRSEQ_MATURE_CNMF'.
-
amp_20q11.21 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
amp_22q12.2 cnv correlated to 'CN_CNMF'.
-
del_1p36.11 cnv correlated to 'METHLYATION_CNMF'.
-
del_1q32.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
del_2q22.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CNMF'.
-
del_2q34 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
-
del_2q37.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
-
del_3p14.2 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_4q22.1 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_4q34.2 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
-
del_5q12.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
-
del_6p25.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
del_6q21 cnv correlated to 'CN_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_6q27 cnv correlated to 'CN_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_7q36.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_8p23.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
-
del_8p21.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_9p23 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_9p21.3 cnv correlated to 'CN_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_9q22.33 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_10p11.21 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
-
del_10q23.31 cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
-
del_11p15.5 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_11q23.3 cnv correlated to 'CN_CNMF'.
-
del_11q25 cnv correlated to 'CN_CNMF'.
-
del_12p13.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
-
del_12q24.33 cnv correlated to 'CN_CNMF' and 'MRNASEQ_CNMF'.
-
del_13q14.2 cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_14q24.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_15q13.1 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
-
del_16p13.3 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', and 'MRNASEQ_CNMF'.
-
del_16q23.1 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CNMF'.
-
del_17p12 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
-
del_18q23 cnv correlated to 'CN_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_19p13.3 cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CNMF'.
-
del_22q13.32 cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
del_xq21.33 cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
amp 4p16 3 | 74 (18%) | 334 |
0.0283 (0.0714) |
0.03 (0.0738) |
0.00373 (0.015) |
0.0002 (0.00142) |
0.0179 (0.0501) |
6e-05 (0.000487) |
0.00026 (0.00177) |
0.00124 (0.00612) |
0.0217 (0.0582) |
0.00202 (0.00888) |
amp 3p25 2 | 190 (47%) | 218 |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.224 (0.334) |
0.0265 (0.0681) |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.00012 (0.000903) |
0.00012 (0.000903) |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
amp 9p24 1 | 88 (22%) | 320 |
1e-05 (9.73e-05) |
0.00406 (0.0162) |
0.0309 (0.0751) |
0.00909 (0.0299) |
0.0237 (0.062) |
0.00167 (0.00767) |
0.00792 (0.0275) |
0.495 (0.585) |
0.00015 (0.00109) |
0.00098 (0.005) |
amp 11p13 | 51 (12%) | 357 |
1e-05 (9.73e-05) |
0.00361 (0.0147) |
0.00147 (0.00697) |
0.0363 (0.0855) |
0.025 (0.0652) |
0.00084 (0.00451) |
0.00079 (0.00434) |
0.713 (0.775) |
0.0308 (0.0751) |
0.00031 (0.00199) |
del 3p14 2 | 117 (29%) | 291 |
9e-05 (0.000692) |
0.0278 (0.0708) |
0.00015 (0.00109) |
0.0104 (0.033) |
1e-05 (9.73e-05) |
4e-05 (0.000348) |
0.00094 (0.0049) |
0.217 (0.33) |
0.00028 (0.00186) |
0.0002 (0.00142) |
del 9p23 | 177 (43%) | 231 |
1e-05 (9.73e-05) |
0.00098 (0.005) |
0.0216 (0.0582) |
0.00463 (0.0177) |
0.00046 (0.00275) |
0.00024 (0.00167) |
0.00272 (0.0115) |
0.0905 (0.169) |
3e-05 (0.000264) |
0.00286 (0.012) |
del 9q22 33 | 178 (44%) | 230 |
2e-05 (0.000182) |
2e-05 (0.000182) |
0.00036 (0.00223) |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.329 (0.438) |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
del 11p15 5 | 211 (52%) | 197 |
1e-05 (9.73e-05) |
0.00067 (0.00382) |
0.609 (0.682) |
0.00023 (0.00161) |
0.00293 (0.0122) |
1e-05 (9.73e-05) |
0.00018 (0.0013) |
0.0182 (0.0506) |
0.00081 (0.00438) |
0.00188 (0.00837) |
del 22q13 32 | 188 (46%) | 220 |
1e-05 (9.73e-05) |
0.00199 (0.0088) |
0.0297 (0.0738) |
0.00109 (0.00549) |
0.00076 (0.0042) |
0.00126 (0.00613) |
0.0427 (0.0968) |
0.589 (0.664) |
0.0018 (0.00811) |
0.0166 (0.047) |
amp 1q23 3 | 216 (53%) | 192 |
1e-05 (9.73e-05) |
0.0409 (0.094) |
0.0605 (0.128) |
0.858 (0.893) |
0.0285 (0.0716) |
0.0252 (0.0654) |
0.00156 (0.00735) |
0.0008 (0.00436) |
0.0447 (0.101) |
0.0108 (0.0336) |
amp 2p25 1 | 152 (37%) | 256 |
1e-05 (9.73e-05) |
2e-05 (0.000182) |
0.219 (0.331) |
0.624 (0.697) |
0.00034 (0.00214) |
2e-05 (0.000182) |
0.00521 (0.0193) |
0.00802 (0.0276) |
0.0379 (0.0884) |
0.00054 (0.00313) |
amp 5p15 33 | 206 (50%) | 202 |
1e-05 (9.73e-05) |
0.0611 (0.128) |
0.00054 (0.00313) |
0.014 (0.0416) |
0.00815 (0.0279) |
0.0195 (0.0536) |
0.00472 (0.0178) |
0.0167 (0.0472) |
0.0841 (0.162) |
0.00463 (0.0177) |
del 8p21 3 | 252 (62%) | 156 |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.118 (0.206) |
0.0336 (0.0804) |
0.00091 (0.00478) |
0.00865 (0.0291) |
0.0694 (0.14) |
0.00448 (0.0175) |
0.0497 (0.11) |
0.0419 (0.0955) |
del 13q14 2 | 156 (38%) | 252 |
1e-05 (9.73e-05) |
0.279 (0.389) |
3e-05 (0.000264) |
0.0163 (0.0466) |
0.0161 (0.0462) |
0.00977 (0.0318) |
0.00104 (0.00527) |
0.354 (0.464) |
0.00721 (0.0257) |
0.00215 (0.0094) |
del 14q24 1 | 137 (34%) | 271 |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.947 (0.956) |
0.0814 (0.158) |
0.00145 (0.00692) |
1e-05 (9.73e-05) |
0.00369 (0.015) |
0.00416 (0.0164) |
0.00161 (0.00748) |
0.00029 (0.00189) |
amp 12q15 | 118 (29%) | 290 |
7e-05 (0.000562) |
0.378 (0.487) |
0.885 (0.915) |
0.578 (0.653) |
0.0255 (0.0658) |
0.0091 (0.0299) |
0.00397 (0.0159) |
0.0363 (0.0855) |
0.0026 (0.0111) |
8e-05 (0.000621) |
del 4q22 1 | 161 (39%) | 247 |
1e-05 (9.73e-05) |
0.0996 (0.18) |
0.00112 (0.0056) |
0.0105 (0.0331) |
0.0179 (0.0501) |
0.00122 (0.00606) |
0.0133 (0.0399) |
0.82 (0.867) |
0.077 (0.15) |
0.0284 (0.0714) |
amp 17q11 2 | 174 (43%) | 234 |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.106 (0.188) |
0.164 (0.267) |
0.00052 (0.00306) |
0.00031 (0.00199) |
0.063 (0.131) |
0.538 (0.619) |
0.00248 (0.0106) |
0.01 (0.0322) |
amp 17q12 | 165 (40%) | 243 |
1e-05 (9.73e-05) |
0.0325 (0.0783) |
0.206 (0.318) |
0.148 (0.251) |
0.0941 (0.173) |
0.0352 (0.0835) |
0.0371 (0.0868) |
0.106 (0.188) |
0.00909 (0.0299) |
0.00909 (0.0299) |
del 8p23 3 | 243 (60%) | 165 |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.123 (0.212) |
0.00841 (0.0285) |
6e-05 (0.000487) |
0.00013 (0.000968) |
0.213 (0.324) |
0.00979 (0.0318) |
0.155 (0.258) |
0.195 (0.306) |
del 9p21 3 | 239 (59%) | 169 |
1e-05 (9.73e-05) |
0.194 (0.305) |
0.0539 (0.116) |
0.00591 (0.0215) |
0.00037 (0.00225) |
0.0223 (0.0595) |
0.238 (0.347) |
0.0913 (0.17) |
0.00414 (0.0164) |
0.0119 (0.0365) |
del 12p13 1 | 68 (17%) | 340 |
0.0154 (0.0445) |
0.00514 (0.0192) |
0.838 (0.879) |
0.221 (0.333) |
1e-05 (9.73e-05) |
5e-05 (0.00042) |
0.00994 (0.0321) |
0.485 (0.579) |
0.0118 (0.0365) |
0.208 (0.32) |
del 15q13 1 | 160 (39%) | 248 |
1e-05 (9.73e-05) |
0.00226 (0.00982) |
0.0934 (0.172) |
0.541 (0.621) |
0.00899 (0.0299) |
0.357 (0.466) |
0.0397 (0.0916) |
0.0104 (0.033) |
0.019 (0.0524) |
0.0584 (0.124) |
amp 1q21 3 | 202 (50%) | 206 |
1e-05 (9.73e-05) |
0.00589 (0.0215) |
0.337 (0.445) |
0.635 (0.705) |
0.0093 (0.0304) |
0.116 (0.204) |
0.0133 (0.0399) |
0.0909 (0.169) |
0.692 (0.759) |
0.0351 (0.0835) |
amp 7p21 1 | 201 (49%) | 207 |
1e-05 (9.73e-05) |
0.00359 (0.0147) |
0.0218 (0.0582) |
0.0932 (0.172) |
0.0133 (0.0399) |
0.0231 (0.061) |
0.0601 (0.127) |
0.312 (0.422) |
0.151 (0.255) |
0.154 (0.258) |
amp 8q22 3 | 264 (65%) | 144 |
1e-05 (9.73e-05) |
8e-05 (0.000621) |
0.0124 (0.0375) |
0.834 (0.876) |
0.447 (0.546) |
0.254 (0.363) |
0.0992 (0.179) |
0.0337 (0.0804) |
0.0327 (0.0784) |
0.186 (0.294) |
amp 8q24 21 | 254 (62%) | 154 |
1e-05 (9.73e-05) |
0.00125 (0.00612) |
0.00034 (0.00214) |
0.172 (0.277) |
0.386 (0.493) |
0.719 (0.78) |
0.0492 (0.109) |
0.0142 (0.0419) |
0.201 (0.312) |
0.24 (0.348) |
amp 11q22 2 | 71 (17%) | 337 |
2e-05 (0.000182) |
0.391 (0.495) |
0.888 (0.915) |
0.413 (0.515) |
0.212 (0.324) |
0.164 (0.267) |
0.00091 (0.00478) |
0.0199 (0.0543) |
0.00026 (0.00177) |
0.0141 (0.0416) |
del 5q12 1 | 202 (50%) | 206 |
1e-05 (9.73e-05) |
0.00141 (0.00677) |
0.0747 (0.148) |
0.269 (0.38) |
0.488 (0.581) |
0.00456 (0.0176) |
0.00182 (0.00815) |
0.0121 (0.0368) |
0.157 (0.259) |
0.0533 (0.116) |
del 6q27 | 190 (47%) | 218 |
1e-05 (9.73e-05) |
0.0541 (0.116) |
0.213 (0.324) |
0.0816 (0.158) |
0.735 (0.792) |
0.0107 (0.0336) |
0.0137 (0.0409) |
0.0108 (0.0336) |
0.254 (0.363) |
0.00281 (0.0119) |
del 18q23 | 179 (44%) | 229 |
1e-05 (9.73e-05) |
0.46 (0.559) |
0.829 (0.873) |
0.792 (0.845) |
0.929 (0.947) |
0.153 (0.257) |
0.00027 (0.00182) |
1e-05 (9.73e-05) |
0.00307 (0.0127) |
0.00439 (0.0172) |
amp 3q26 33 | 218 (53%) | 190 |
1e-05 (9.73e-05) |
0.894 (0.92) |
0.0018 (0.00811) |
0.187 (0.294) |
0.159 (0.261) |
0.0226 (0.0599) |
0.0103 (0.0329) |
0.178 (0.284) |
0.282 (0.391) |
0.0769 (0.15) |
amp 6p22 3 | 171 (42%) | 237 |
1e-05 (9.73e-05) |
5e-05 (0.00042) |
0.0459 (0.103) |
0.913 (0.936) |
0.00158 (0.00739) |
0.549 (0.626) |
0.274 (0.384) |
0.395 (0.498) |
0.332 (0.44) |
0.275 (0.385) |
amp 10p14 | 182 (45%) | 226 |
1e-05 (9.73e-05) |
1e-05 (9.73e-05) |
0.252 (0.362) |
0.164 (0.267) |
0.00451 (0.0175) |
5e-05 (0.00042) |
0.154 (0.258) |
0.0679 (0.138) |
0.38 (0.489) |
0.168 (0.272) |
amp 16q22 1 | 108 (26%) | 300 |
1e-05 (9.73e-05) |
0.563 (0.639) |
0.326 (0.436) |
0.27 (0.381) |
0.475 (0.573) |
0.00466 (0.0177) |
0.0517 (0.113) |
0.0147 (0.0429) |
0.0292 (0.0729) |
0.17 (0.275) |
del 2q34 | 174 (43%) | 234 |
1e-05 (9.73e-05) |
0.00098 (0.005) |
0.00662 (0.0237) |
0.485 (0.579) |
0.00767 (0.0269) |
0.108 (0.193) |
0.503 (0.589) |
0.348 (0.457) |
0.525 (0.606) |
0.927 (0.946) |
del 2q37 1 | 207 (51%) | 201 |
1e-05 (9.73e-05) |
0.00029 (0.00189) |
0.0434 (0.0981) |
0.602 (0.676) |
0.0255 (0.0658) |
0.0659 (0.135) |
0.236 (0.344) |
0.0725 (0.145) |
0.289 (0.397) |
0.335 (0.444) |
del 6p25 3 | 106 (26%) | 302 |
1e-05 (9.73e-05) |
0.00037 (0.00225) |
0.0391 (0.0907) |
0.898 (0.922) |
0.0507 (0.111) |
0.0148 (0.0429) |
0.475 (0.573) |
0.405 (0.509) |
0.358 (0.466) |
0.845 (0.885) |
del 6q21 | 190 (47%) | 218 |
1e-05 (9.73e-05) |
0.238 (0.347) |
0.145 (0.246) |
0.465 (0.564) |
0.886 (0.915) |
0.235 (0.344) |
0.00299 (0.0124) |
0.0147 (0.0429) |
0.256 (0.365) |
0.00625 (0.0226) |
del 7q36 3 | 60 (15%) | 348 |
0.00051 (0.00303) |
0.521 (0.603) |
0.119 (0.208) |
0.0976 (0.178) |
0.0325 (0.0783) |
0.482 (0.577) |
0.537 (0.619) |
0.0539 (0.116) |
0.0208 (0.0566) |
0.0297 (0.0738) |
del 16p13 3 | 174 (43%) | 234 |
1e-05 (9.73e-05) |
0.0186 (0.0518) |
0.00575 (0.0211) |
0.441 (0.543) |
0.00794 (0.0275) |
0.262 (0.373) |
0.946 (0.956) |
0.977 (0.98) |
0.411 (0.515) |
0.512 (0.595) |
del 19p13 3 | 145 (36%) | 263 |
1e-05 (9.73e-05) |
0.488 (0.581) |
0.265 (0.375) |
0.155 (0.258) |
0.0203 (0.0552) |
0.00089 (0.00474) |
0.0385 (0.0896) |
0.11 (0.194) |
0.352 (0.461) |
0.102 (0.183) |
amp 1p34 2 | 101 (25%) | 307 |
1e-05 (9.73e-05) |
0.00741 (0.0261) |
0.287 (0.396) |
0.652 (0.719) |
0.184 (0.291) |
0.0981 (0.178) |
0.065 (0.134) |
0.0237 (0.062) |
0.283 (0.393) |
0.0958 (0.176) |
amp 4q13 3 | 62 (15%) | 346 |
1e-05 (9.73e-05) |
0.0299 (0.0738) |
0.281 (0.391) |
0.66 (0.725) |
0.393 (0.496) |
0.447 (0.546) |
0.085 (0.162) |
0.0918 (0.17) |
0.118 (0.206) |
0.00162 (0.00748) |
amp 6q23 3 | 46 (11%) | 362 |
0.00518 (0.0193) |
0.624 (0.697) |
0.467 (0.565) |
0.224 (0.334) |
0.011 (0.0342) |
0.829 (0.873) |
0.205 (0.318) |
0.0299 (0.0738) |
0.178 (0.284) |
0.161 (0.263) |
amp 7p11 2 | 190 (47%) | 218 |
1e-05 (9.73e-05) |
0.00844 (0.0285) |
0.00173 (0.00789) |
0.218 (0.33) |
0.0613 (0.128) |
0.256 (0.365) |
0.0881 (0.166) |
0.645 (0.713) |
0.0737 (0.147) |
0.0895 (0.168) |
amp 8p11 21 | 140 (34%) | 268 |
1e-05 (9.73e-05) |
0.00071 (0.00396) |
0.0873 (0.165) |
0.611 (0.684) |
0.285 (0.394) |
0.313 (0.423) |
0.773 (0.829) |
0.0367 (0.0861) |
0.555 (0.632) |
0.482 (0.577) |
amp 16p13 2 | 87 (21%) | 321 |
1e-05 (9.73e-05) |
0.00044 (0.00265) |
0.986 (0.987) |
0.782 (0.837) |
0.00818 (0.0279) |
0.0849 (0.162) |
0.206 (0.318) |
0.284 (0.394) |
0.507 (0.593) |
0.408 (0.512) |
amp 19q12 | 164 (40%) | 244 |
1e-05 (9.73e-05) |
0.00235 (0.0102) |
0.236 (0.344) |
0.796 (0.847) |
0.23 (0.34) |
0.115 (0.203) |
0.156 (0.258) |
0.0427 (0.0968) |
0.247 (0.355) |
0.176 (0.281) |
amp 19q13 43 | 155 (38%) | 253 |
1e-05 (9.73e-05) |
0.00636 (0.0229) |
0.0897 (0.168) |
0.652 (0.719) |
0.344 (0.453) |
0.547 (0.625) |
0.103 (0.185) |
0.296 (0.407) |
0.0472 (0.105) |
0.083 (0.16) |
amp 20q11 21 | 263 (64%) | 145 |
1e-05 (9.73e-05) |
0.0692 (0.139) |
0.141 (0.241) |
0.508 (0.594) |
0.23 (0.34) |
0.0267 (0.0685) |
0.211 (0.324) |
0.156 (0.258) |
0.0661 (0.135) |
0.0469 (0.105) |
del 1q32 1 | 72 (18%) | 336 |
0.00028 (0.00186) |
0.0279 (0.0708) |
0.597 (0.671) |
0.195 (0.306) |
0.459 (0.559) |
0.0447 (0.101) |
0.431 (0.533) |
0.734 (0.792) |
0.559 (0.635) |
0.641 (0.71) |
del 2q22 1 | 134 (33%) | 274 |
0.00127 (0.00614) |
0.0077 (0.0269) |
0.492 (0.583) |
0.976 (0.98) |
0.00036 (0.00223) |
0.16 (0.262) |
0.173 (0.278) |
0.382 (0.49) |
0.072 (0.144) |
0.698 (0.764) |
del 16q23 1 | 119 (29%) | 289 |
1e-05 (9.73e-05) |
0.079 (0.153) |
0.077 (0.15) |
0.101 (0.182) |
0.00735 (0.026) |
0.0654 (0.134) |
0.00534 (0.0197) |
0.201 (0.312) |
0.0645 (0.133) |
0.0616 (0.128) |
del 17p12 | 208 (51%) | 200 |
1e-05 (9.73e-05) |
0.00056 (0.00322) |
0.33 (0.439) |
0.39 (0.495) |
0.224 (0.334) |
0.016 (0.0461) |
0.759 (0.815) |
0.806 (0.856) |
0.234 (0.344) |
0.715 (0.777) |
del xq21 33 | 84 (21%) | 324 |
0.234 (0.344) |
0.0416 (0.0952) |
0.328 (0.438) |
0.252 (0.362) |
0.0118 (0.0364) |
0.0966 (0.177) |
0.156 (0.258) |
0.0495 (0.109) |
0.0508 (0.111) |
0.181 (0.287) |
amp 6q21 | 35 (9%) | 373 |
0.00069 (0.0039) |
0.0617 (0.128) |
0.221 (0.333) |
0.389 (0.495) |
0.00071 (0.00396) |
0.0585 (0.124) |
0.581 (0.655) |
0.898 (0.922) |
0.271 (0.381) |
0.711 (0.775) |
amp 8p11 23 | 124 (30%) | 284 |
1e-05 (9.73e-05) |
0.0179 (0.0501) |
0.534 (0.615) |
0.344 (0.453) |
0.279 (0.389) |
0.213 (0.324) |
0.264 (0.375) |
0.476 (0.573) |
0.866 (0.898) |
0.849 (0.887) |
amp 12p12 1 | 132 (32%) | 276 |
6e-05 (0.000487) |
0.0652 (0.134) |
0.0888 (0.167) |
0.869 (0.9) |
0.218 (0.33) |
0.63 (0.7) |
0.304 (0.414) |
0.421 (0.525) |
0.232 (0.343) |
0.0235 (0.062) |
amp 16p11 2 | 98 (24%) | 310 |
1e-05 (9.73e-05) |
0.019 (0.0524) |
0.724 (0.784) |
0.512 (0.595) |
0.429 (0.532) |
0.39 (0.495) |
0.545 (0.624) |
0.378 (0.487) |
0.938 (0.951) |
0.83 (0.873) |
amp 17q23 3 | 194 (48%) | 214 |
1e-05 (9.73e-05) |
0.0321 (0.0778) |
0.117 (0.205) |
0.856 (0.892) |
0.429 (0.532) |
0.362 (0.47) |
0.435 (0.536) |
0.286 (0.395) |
0.131 (0.226) |
0.356 (0.465) |
del 4q34 2 | 177 (43%) | 231 |
1e-05 (9.73e-05) |
0.0582 (0.124) |
0.0668 (0.136) |
0.076 (0.15) |
0.143 (0.244) |
0.041 (0.094) |
0.169 (0.274) |
0.63 (0.7) |
0.499 (0.588) |
0.12 (0.208) |
del 10p11 21 | 74 (18%) | 334 |
0.012 (0.0366) |
0.916 (0.937) |
0.152 (0.256) |
0.512 (0.595) |
0.0308 (0.0751) |
0.0685 (0.139) |
0.499 (0.588) |
0.502 (0.589) |
0.218 (0.33) |
0.0847 (0.162) |
del 10q23 31 | 168 (41%) | 240 |
1e-05 (9.73e-05) |
0.0275 (0.0701) |
0.132 (0.228) |
0.0744 (0.148) |
0.179 (0.284) |
0.567 (0.643) |
0.806 (0.856) |
0.492 (0.583) |
0.244 (0.353) |
0.727 (0.785) |
del 12q24 33 | 88 (22%) | 320 |
1e-05 (9.73e-05) |
0.495 (0.585) |
0.299 (0.408) |
0.334 (0.443) |
0.0218 (0.0582) |
0.385 (0.493) |
0.788 (0.841) |
0.517 (0.599) |
0.94 (0.952) |
0.964 (0.971) |
amp 11q13 3 | 135 (33%) | 273 |
3e-05 (0.000264) |
0.133 (0.229) |
0.816 (0.864) |
0.0854 (0.162) |
0.0573 (0.123) |
0.325 (0.436) |
0.109 (0.193) |
0.434 (0.536) |
0.197 (0.309) |
0.118 (0.206) |
amp 13q22 1 | 128 (31%) | 280 |
1e-05 (9.73e-05) |
0.933 (0.949) |
0.319 (0.43) |
0.821 (0.867) |
0.97 (0.975) |
0.371 (0.48) |
0.377 (0.487) |
0.727 (0.785) |
0.863 (0.897) |
0.994 (0.994) |
amp 17p11 2 | 88 (22%) | 320 |
0.00468 (0.0177) |
0.152 (0.256) |
0.654 (0.721) |
0.937 (0.951) |
0.233 (0.343) |
0.626 (0.698) |
0.388 (0.495) |
0.224 (0.334) |
0.31 (0.42) |
0.478 (0.574) |
amp 22q12 2 | 87 (21%) | 321 |
8e-05 (0.000621) |
0.0533 (0.116) |
0.784 (0.838) |
0.752 (0.808) |
0.173 (0.278) |
0.0616 (0.128) |
0.098 (0.178) |
0.857 (0.892) |
0.442 (0.543) |
0.923 (0.944) |
del 1p36 11 | 91 (22%) | 317 |
0.141 (0.241) |
0.016 (0.0461) |
0.0969 (0.177) |
0.326 (0.436) |
0.0759 (0.15) |
0.952 (0.96) |
0.363 (0.47) |
0.056 (0.12) |
0.456 (0.556) |
0.7 (0.765) |
del 11q23 3 | 153 (38%) | 255 |
1e-05 (9.73e-05) |
0.297 (0.407) |
0.39 (0.495) |
0.71 (0.774) |
0.517 (0.599) |
0.2 (0.312) |
0.399 (0.502) |
0.0862 (0.163) |
0.412 (0.515) |
0.228 (0.339) |
del 11q25 | 144 (35%) | 264 |
1e-05 (9.73e-05) |
0.243 (0.352) |
0.482 (0.577) |
0.424 (0.528) |
0.545 (0.624) |
0.246 (0.355) |
0.501 (0.589) |
0.0789 (0.153) |
0.299 (0.408) |
0.307 (0.418) |
del xp11 3 | 91 (22%) | 317 |
0.437 (0.538) |
0.0763 (0.15) |
0.933 (0.949) |
0.85 (0.887) |
0.321 (0.431) |
0.572 (0.647) |
0.693 (0.759) |
0.148 (0.251) |
0.449 (0.548) |
0.318 (0.429) |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 1(1P34.2) MUTATED | 23 | 58 | 5 | 14 | 1 |
AMP PEAK 1(1P34.2) WILD-TYPE | 55 | 88 | 116 | 47 | 1 |
P value = 0.00741 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 1(1P34.2) MUTATED | 31 | 45 | 10 | 15 |
AMP PEAK 1(1P34.2) WILD-TYPE | 107 | 82 | 53 | 65 |
P value = 0.0237 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 1(1P34.2) MUTATED | 55 | 28 | 18 |
AMP PEAK 1(1P34.2) WILD-TYPE | 211 | 55 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 2(1Q21.3) MUTATED | 50 | 95 | 21 | 34 | 2 |
AMP PEAK 2(1Q21.3) WILD-TYPE | 28 | 51 | 100 | 27 | 0 |
P value = 0.00589 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 2(1Q21.3) MUTATED | 60 | 79 | 26 | 37 |
AMP PEAK 2(1Q21.3) WILD-TYPE | 78 | 48 | 37 | 43 |
P value = 0.0093 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 2(1Q21.3) MUTATED | 34 | 65 | 15 | 47 | 40 |
AMP PEAK 2(1Q21.3) WILD-TYPE | 38 | 70 | 23 | 56 | 16 |
P value = 0.0133 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 2(1Q21.3) MUTATED | 48 | 44 | 52 | 19 | 38 |
AMP PEAK 2(1Q21.3) WILD-TYPE | 57 | 30 | 62 | 6 | 49 |
P value = 0.0351 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 2(1Q21.3) MUTATED | 36 | 32 | 27 | 71 | 30 |
AMP PEAK 2(1Q21.3) WILD-TYPE | 51 | 28 | 14 | 61 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 3(1Q23.3) MUTATED | 52 | 105 | 26 | 31 | 2 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 26 | 41 | 95 | 30 | 0 |
P value = 0.0409 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 3(1Q23.3) MUTATED | 70 | 80 | 28 | 38 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 68 | 47 | 35 | 42 |
P value = 0.0285 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 3(1Q23.3) MUTATED | 36 | 73 | 16 | 50 | 40 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 36 | 62 | 22 | 53 | 16 |
P value = 0.0252 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 3(1Q23.3) MUTATED | 75 | 53 | 87 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 43 | 59 | 87 |
P value = 0.00156 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 3(1Q23.3) MUTATED | 49 | 54 | 55 | 16 | 41 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 56 | 20 | 59 | 9 | 46 |
P value = 8e-04 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 3(1Q23.3) MUTATED | 127 | 59 | 29 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 139 | 24 | 27 |
P value = 0.0447 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 3(1Q23.3) MUTATED | 66 | 36 | 65 | 43 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 58 | 15 | 62 | 49 |
P value = 0.0108 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 3(1Q23.3) MUTATED | 40 | 41 | 26 | 72 | 31 |
AMP PEAK 3(1Q23.3) WILD-TYPE | 47 | 19 | 15 | 60 | 43 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 4(2P25.1) MUTATED | 36 | 80 | 16 | 19 | 1 |
AMP PEAK 4(2P25.1) WILD-TYPE | 42 | 66 | 105 | 42 | 1 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 4(2P25.1) MUTATED | 41 | 73 | 15 | 23 |
AMP PEAK 4(2P25.1) WILD-TYPE | 97 | 54 | 48 | 57 |
P value = 0.00034 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 4(2P25.1) MUTATED | 25 | 62 | 5 | 31 | 28 |
AMP PEAK 4(2P25.1) WILD-TYPE | 47 | 73 | 33 | 72 | 28 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 4(2P25.1) MUTATED | 64 | 38 | 49 |
AMP PEAK 4(2P25.1) WILD-TYPE | 54 | 74 | 125 |
P value = 0.00521 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 4(2P25.1) MUTATED | 29 | 39 | 40 | 13 | 29 |
AMP PEAK 4(2P25.1) WILD-TYPE | 76 | 35 | 74 | 12 | 58 |
P value = 0.00802 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 4(2P25.1) MUTATED | 88 | 43 | 19 |
AMP PEAK 4(2P25.1) WILD-TYPE | 178 | 40 | 37 |
P value = 0.0379 (Fisher's exact test), Q value = 0.088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 4(2P25.1) MUTATED | 47 | 27 | 48 | 26 |
AMP PEAK 4(2P25.1) WILD-TYPE | 77 | 24 | 79 | 66 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 4(2P25.1) MUTATED | 28 | 32 | 20 | 53 | 15 |
AMP PEAK 4(2P25.1) WILD-TYPE | 59 | 28 | 21 | 79 | 59 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 5(3P25.2) MUTATED | 52 | 92 | 19 | 26 | 1 |
AMP PEAK 5(3P25.2) WILD-TYPE | 26 | 54 | 102 | 35 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 5(3P25.2) MUTATED | 48 | 87 | 27 | 28 |
AMP PEAK 5(3P25.2) WILD-TYPE | 90 | 40 | 36 | 52 |
P value = 0.0265 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
AMP PEAK 5(3P25.2) MUTATED | 42 | 65 | 35 | 10 |
AMP PEAK 5(3P25.2) WILD-TYPE | 48 | 56 | 63 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 5(3P25.2) MUTATED | 35 | 84 | 4 | 32 | 33 |
AMP PEAK 5(3P25.2) WILD-TYPE | 37 | 51 | 34 | 71 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 5(3P25.2) MUTATED | 78 | 60 | 50 |
AMP PEAK 5(3P25.2) WILD-TYPE | 40 | 52 | 124 |
P value = 0.00012 (Fisher's exact test), Q value = 9e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 5(3P25.2) MUTATED | 36 | 51 | 53 | 13 | 36 |
AMP PEAK 5(3P25.2) WILD-TYPE | 69 | 23 | 61 | 12 | 51 |
P value = 0.00012 (Fisher's exact test), Q value = 9e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 5(3P25.2) MUTATED | 105 | 55 | 29 |
AMP PEAK 5(3P25.2) WILD-TYPE | 161 | 28 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 5(3P25.2) MUTATED | 55 | 40 | 62 | 28 |
AMP PEAK 5(3P25.2) WILD-TYPE | 69 | 11 | 65 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 5(3P25.2) MUTATED | 39 | 43 | 15 | 68 | 20 |
AMP PEAK 5(3P25.2) WILD-TYPE | 48 | 17 | 26 | 64 | 54 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 6(3Q26.33) MUTATED | 54 | 99 | 33 | 30 | 2 |
AMP PEAK 6(3Q26.33) WILD-TYPE | 24 | 47 | 88 | 31 | 0 |
P value = 0.0018 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 6(3Q26.33) MUTATED | 59 | 48 | 68 |
AMP PEAK 6(3Q26.33) WILD-TYPE | 63 | 66 | 36 |
P value = 0.0226 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 6(3Q26.33) MUTATED | 74 | 50 | 93 |
AMP PEAK 6(3Q26.33) WILD-TYPE | 44 | 62 | 81 |
P value = 0.0103 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 6(3Q26.33) MUTATED | 58 | 49 | 48 | 17 | 44 |
AMP PEAK 6(3Q26.33) WILD-TYPE | 47 | 25 | 66 | 8 | 43 |
P value = 0.0283 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 7(4P16.3) MUTATED | 18 | 35 | 15 | 6 | 0 |
AMP PEAK 7(4P16.3) WILD-TYPE | 60 | 111 | 106 | 55 | 2 |
P value = 0.03 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 7(4P16.3) MUTATED | 15 | 30 | 11 | 18 |
AMP PEAK 7(4P16.3) WILD-TYPE | 123 | 97 | 52 | 62 |
P value = 0.00373 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 7(4P16.3) MUTATED | 12 | 29 | 23 |
AMP PEAK 7(4P16.3) WILD-TYPE | 110 | 85 | 81 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
AMP PEAK 7(4P16.3) MUTATED | 13 | 38 | 10 | 3 |
AMP PEAK 7(4P16.3) WILD-TYPE | 77 | 83 | 88 | 28 |
P value = 0.0179 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 7(4P16.3) MUTATED | 7 | 33 | 11 | 14 | 8 |
AMP PEAK 7(4P16.3) WILD-TYPE | 65 | 102 | 27 | 89 | 48 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 7(4P16.3) MUTATED | 20 | 35 | 18 |
AMP PEAK 7(4P16.3) WILD-TYPE | 98 | 77 | 156 |
P value = 0.00026 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 7(4P16.3) MUTATED | 15 | 21 | 30 | 2 | 6 |
AMP PEAK 7(4P16.3) WILD-TYPE | 90 | 53 | 84 | 23 | 81 |
P value = 0.00124 (Fisher's exact test), Q value = 0.0061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 7(4P16.3) MUTATED | 47 | 24 | 3 |
AMP PEAK 7(4P16.3) WILD-TYPE | 219 | 59 | 53 |
P value = 0.0217 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 7(4P16.3) MUTATED | 15 | 11 | 33 | 13 |
AMP PEAK 7(4P16.3) WILD-TYPE | 109 | 40 | 94 | 79 |
P value = 0.00202 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 7(4P16.3) MUTATED | 7 | 15 | 4 | 35 | 11 |
AMP PEAK 7(4P16.3) WILD-TYPE | 80 | 45 | 37 | 97 | 63 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 8(4Q13.3) MUTATED | 12 | 41 | 5 | 4 | 0 |
AMP PEAK 8(4Q13.3) WILD-TYPE | 66 | 105 | 116 | 57 | 2 |
P value = 0.0299 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 8(4Q13.3) MUTATED | 18 | 28 | 4 | 12 |
AMP PEAK 8(4Q13.3) WILD-TYPE | 120 | 99 | 59 | 68 |
P value = 0.00162 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 8(4Q13.3) MUTATED | 5 | 14 | 8 | 28 | 6 |
AMP PEAK 8(4Q13.3) WILD-TYPE | 82 | 46 | 33 | 104 | 68 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 9(5P15.33) MUTATED | 50 | 94 | 20 | 40 | 2 |
AMP PEAK 9(5P15.33) WILD-TYPE | 28 | 52 | 101 | 21 | 0 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 9(5P15.33) MUTATED | 63 | 40 | 63 |
AMP PEAK 9(5P15.33) WILD-TYPE | 59 | 74 | 41 |
P value = 0.014 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
AMP PEAK 9(5P15.33) MUTATED | 41 | 48 | 58 | 19 |
AMP PEAK 9(5P15.33) WILD-TYPE | 49 | 73 | 40 | 12 |
P value = 0.00815 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 9(5P15.33) MUTATED | 32 | 61 | 13 | 63 | 34 |
AMP PEAK 9(5P15.33) WILD-TYPE | 40 | 74 | 25 | 40 | 22 |
P value = 0.0195 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 9(5P15.33) MUTATED | 50 | 52 | 101 |
AMP PEAK 9(5P15.33) WILD-TYPE | 68 | 60 | 73 |
P value = 0.00472 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 9(5P15.33) MUTATED | 54 | 47 | 42 | 15 | 47 |
AMP PEAK 9(5P15.33) WILD-TYPE | 51 | 27 | 72 | 10 | 40 |
P value = 0.0167 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 9(5P15.33) MUTATED | 121 | 51 | 33 |
AMP PEAK 9(5P15.33) WILD-TYPE | 145 | 32 | 23 |
P value = 0.00463 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 9(5P15.33) MUTATED | 35 | 35 | 28 | 59 | 45 |
AMP PEAK 9(5P15.33) WILD-TYPE | 52 | 25 | 13 | 73 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 10(6P22.3) MUTATED | 37 | 82 | 10 | 41 | 1 |
AMP PEAK 10(6P22.3) WILD-TYPE | 41 | 64 | 111 | 20 | 1 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 10(6P22.3) MUTATED | 56 | 73 | 18 | 24 |
AMP PEAK 10(6P22.3) WILD-TYPE | 82 | 54 | 45 | 56 |
P value = 0.0459 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 10(6P22.3) MUTATED | 41 | 41 | 51 |
AMP PEAK 10(6P22.3) WILD-TYPE | 81 | 73 | 53 |
P value = 0.00158 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 10(6P22.3) MUTATED | 21 | 60 | 8 | 48 | 31 |
AMP PEAK 10(6P22.3) WILD-TYPE | 51 | 75 | 30 | 55 | 25 |
P value = 0.00069 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 11(6Q21) MUTATED | 5 | 15 | 4 | 9 | 2 |
AMP PEAK 11(6Q21) WILD-TYPE | 73 | 131 | 117 | 52 | 0 |
P value = 0.00071 (Fisher's exact test), Q value = 0.004
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 11(6Q21) MUTATED | 4 | 10 | 2 | 4 | 14 |
AMP PEAK 11(6Q21) WILD-TYPE | 68 | 125 | 36 | 99 | 42 |
P value = 0.00518 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 12(6Q23.3) MUTATED | 6 | 21 | 8 | 9 | 2 |
AMP PEAK 12(6Q23.3) WILD-TYPE | 72 | 125 | 113 | 52 | 0 |
P value = 0.011 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 12(6Q23.3) MUTATED | 4 | 16 | 3 | 8 | 14 |
AMP PEAK 12(6Q23.3) WILD-TYPE | 68 | 119 | 35 | 95 | 42 |
P value = 0.0299 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 12(6Q23.3) MUTATED | 34 | 11 | 1 |
AMP PEAK 12(6Q23.3) WILD-TYPE | 232 | 72 | 55 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 13(7P21.1) MUTATED | 51 | 91 | 17 | 40 | 2 |
AMP PEAK 13(7P21.1) WILD-TYPE | 27 | 55 | 104 | 21 | 0 |
P value = 0.00359 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 13(7P21.1) MUTATED | 69 | 77 | 23 | 32 |
AMP PEAK 13(7P21.1) WILD-TYPE | 69 | 50 | 40 | 48 |
P value = 0.0218 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 13(7P21.1) MUTATED | 55 | 48 | 62 |
AMP PEAK 13(7P21.1) WILD-TYPE | 67 | 66 | 42 |
P value = 0.0133 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 13(7P21.1) MUTATED | 29 | 65 | 12 | 60 | 33 |
AMP PEAK 13(7P21.1) WILD-TYPE | 43 | 70 | 26 | 43 | 23 |
P value = 0.0231 (Fisher's exact test), Q value = 0.061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 13(7P21.1) MUTATED | 65 | 43 | 91 |
AMP PEAK 13(7P21.1) WILD-TYPE | 53 | 69 | 83 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 14(7P11.2) MUTATED | 56 | 80 | 16 | 36 | 2 |
AMP PEAK 14(7P11.2) WILD-TYPE | 22 | 66 | 105 | 25 | 0 |
P value = 0.00844 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 14(7P11.2) MUTATED | 67 | 71 | 20 | 32 |
AMP PEAK 14(7P11.2) WILD-TYPE | 71 | 56 | 43 | 48 |
P value = 0.00173 (Fisher's exact test), Q value = 0.0079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 14(7P11.2) MUTATED | 51 | 43 | 63 |
AMP PEAK 14(7P11.2) WILD-TYPE | 71 | 71 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 15(8P11.23) MUTATED | 62 | 30 | 20 | 10 | 2 |
AMP PEAK 15(8P11.23) WILD-TYPE | 16 | 116 | 101 | 51 | 0 |
P value = 0.0179 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 15(8P11.23) MUTATED | 36 | 43 | 12 | 33 |
AMP PEAK 15(8P11.23) WILD-TYPE | 102 | 84 | 51 | 47 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 16(8P11.21) MUTATED | 64 | 41 | 18 | 16 | 1 |
AMP PEAK 16(8P11.21) WILD-TYPE | 14 | 105 | 103 | 45 | 1 |
P value = 0.00071 (Fisher's exact test), Q value = 0.004
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 16(8P11.21) MUTATED | 40 | 56 | 11 | 33 |
AMP PEAK 16(8P11.21) WILD-TYPE | 98 | 71 | 52 | 47 |
P value = 0.0367 (Fisher's exact test), Q value = 0.086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 16(8P11.21) MUTATED | 99 | 29 | 11 |
AMP PEAK 16(8P11.21) WILD-TYPE | 167 | 54 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 17(8Q22.3) MUTATED | 68 | 111 | 45 | 39 | 1 |
AMP PEAK 17(8Q22.3) WILD-TYPE | 10 | 35 | 76 | 22 | 1 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 17(8Q22.3) MUTATED | 82 | 101 | 30 | 51 |
AMP PEAK 17(8Q22.3) WILD-TYPE | 56 | 26 | 33 | 29 |
P value = 0.0124 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 17(8Q22.3) MUTATED | 75 | 66 | 79 |
AMP PEAK 17(8Q22.3) WILD-TYPE | 47 | 48 | 25 |
P value = 0.0337 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 17(8Q22.3) MUTATED | 170 | 62 | 30 |
AMP PEAK 17(8Q22.3) WILD-TYPE | 96 | 21 | 26 |
P value = 0.0327 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 17(8Q22.3) MUTATED | 75 | 42 | 83 | 57 |
AMP PEAK 17(8Q22.3) WILD-TYPE | 49 | 9 | 44 | 35 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 18(8Q24.21) MUTATED | 65 | 107 | 43 | 37 | 2 |
AMP PEAK 18(8Q24.21) WILD-TYPE | 13 | 39 | 78 | 24 | 0 |
P value = 0.00125 (Fisher's exact test), Q value = 0.0061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 18(8Q24.21) MUTATED | 82 | 93 | 28 | 51 |
AMP PEAK 18(8Q24.21) WILD-TYPE | 56 | 34 | 35 | 29 |
P value = 0.00034 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 18(8Q24.21) MUTATED | 71 | 59 | 80 |
AMP PEAK 18(8Q24.21) WILD-TYPE | 51 | 55 | 24 |
P value = 0.0492 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 18(8Q24.21) MUTATED | 70 | 53 | 66 | 18 | 45 |
AMP PEAK 18(8Q24.21) WILD-TYPE | 35 | 21 | 48 | 7 | 42 |
P value = 0.0142 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 18(8Q24.21) MUTATED | 167 | 59 | 26 |
AMP PEAK 18(8Q24.21) WILD-TYPE | 99 | 24 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 19(9P24.1) MUTATED | 23 | 20 | 10 | 34 | 1 |
AMP PEAK 19(9P24.1) WILD-TYPE | 55 | 126 | 111 | 27 | 1 |
P value = 0.00406 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 19(9P24.1) MUTATED | 44 | 21 | 8 | 15 |
AMP PEAK 19(9P24.1) WILD-TYPE | 94 | 106 | 55 | 65 |
P value = 0.0309 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 19(9P24.1) MUTATED | 34 | 16 | 24 |
AMP PEAK 19(9P24.1) WILD-TYPE | 88 | 98 | 80 |
P value = 0.00909 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
AMP PEAK 19(9P24.1) MUTATED | 19 | 16 | 28 | 11 |
AMP PEAK 19(9P24.1) WILD-TYPE | 71 | 105 | 70 | 20 |
P value = 0.0237 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 19(9P24.1) MUTATED | 14 | 24 | 3 | 32 | 13 |
AMP PEAK 19(9P24.1) WILD-TYPE | 58 | 111 | 35 | 71 | 43 |
P value = 0.00167 (Fisher's exact test), Q value = 0.0077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 19(9P24.1) MUTATED | 21 | 14 | 51 |
AMP PEAK 19(9P24.1) WILD-TYPE | 97 | 98 | 123 |
P value = 0.00792 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 19(9P24.1) MUTATED | 36 | 12 | 17 | 6 | 17 |
AMP PEAK 19(9P24.1) WILD-TYPE | 69 | 62 | 97 | 19 | 70 |
P value = 0.00015 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 19(9P24.1) MUTATED | 22 | 9 | 18 | 36 |
AMP PEAK 19(9P24.1) WILD-TYPE | 102 | 42 | 109 | 56 |
P value = 0.00098 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 19(9P24.1) MUTATED | 18 | 10 | 6 | 21 | 30 |
AMP PEAK 19(9P24.1) WILD-TYPE | 69 | 50 | 35 | 111 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 20(10P14) MUTATED | 45 | 89 | 12 | 36 | 0 |
AMP PEAK 20(10P14) WILD-TYPE | 33 | 57 | 109 | 25 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 20(10P14) MUTATED | 55 | 81 | 22 | 24 |
AMP PEAK 20(10P14) WILD-TYPE | 83 | 46 | 41 | 56 |
P value = 0.00451 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 20(10P14) MUTATED | 33 | 63 | 7 | 45 | 32 |
AMP PEAK 20(10P14) WILD-TYPE | 39 | 72 | 31 | 58 | 24 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 20(10P14) MUTATED | 73 | 39 | 68 |
AMP PEAK 20(10P14) WILD-TYPE | 45 | 73 | 106 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 21(11P13) MUTATED | 12 | 15 | 3 | 20 | 1 |
AMP PEAK 21(11P13) WILD-TYPE | 66 | 131 | 118 | 41 | 1 |
P value = 0.00361 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 21(11P13) MUTATED | 25 | 19 | 4 | 3 |
AMP PEAK 21(11P13) WILD-TYPE | 113 | 108 | 59 | 77 |
P value = 0.00147 (Fisher's exact test), Q value = 0.007
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
AMP PEAK 21(11P13) MUTATED | 22 | 5 | 18 |
AMP PEAK 21(11P13) WILD-TYPE | 100 | 109 | 86 |
P value = 0.0363 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
AMP PEAK 21(11P13) MUTATED | 14 | 8 | 17 | 6 |
AMP PEAK 21(11P13) WILD-TYPE | 76 | 113 | 81 | 25 |
P value = 0.025 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 21(11P13) MUTATED | 9 | 9 | 3 | 20 | 10 |
AMP PEAK 21(11P13) WILD-TYPE | 63 | 126 | 35 | 83 | 46 |
P value = 0.00084 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 21(11P13) MUTATED | 16 | 4 | 31 |
AMP PEAK 21(11P13) WILD-TYPE | 102 | 108 | 143 |
P value = 0.00079 (Fisher's exact test), Q value = 0.0043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 21(11P13) MUTATED | 19 | 7 | 5 | 8 | 12 |
AMP PEAK 21(11P13) WILD-TYPE | 86 | 67 | 109 | 17 | 75 |
P value = 0.0308 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 21(11P13) MUTATED | 16 | 4 | 11 | 20 |
AMP PEAK 21(11P13) WILD-TYPE | 108 | 47 | 116 | 72 |
P value = 0.00031 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 21(11P13) MUTATED | 10 | 4 | 7 | 9 | 21 |
AMP PEAK 21(11P13) WILD-TYPE | 77 | 56 | 34 | 123 | 53 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 22(11Q13.3) MUTATED | 33 | 62 | 21 | 18 | 1 |
AMP PEAK 22(11Q13.3) WILD-TYPE | 45 | 84 | 100 | 43 | 1 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 23(11Q22.2) MUTATED | 20 | 33 | 4 | 14 | 0 |
AMP PEAK 23(11Q22.2) WILD-TYPE | 58 | 113 | 117 | 47 | 2 |
P value = 0.00091 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 23(11Q22.2) MUTATED | 25 | 22 | 11 | 4 | 9 |
AMP PEAK 23(11Q22.2) WILD-TYPE | 80 | 52 | 103 | 21 | 78 |
P value = 0.0199 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 23(11Q22.2) MUTATED | 42 | 23 | 6 |
AMP PEAK 23(11Q22.2) WILD-TYPE | 224 | 60 | 50 |
P value = 0.00026 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 23(11Q22.2) MUTATED | 18 | 17 | 12 | 24 |
AMP PEAK 23(11Q22.2) WILD-TYPE | 106 | 34 | 115 | 68 |
P value = 0.0141 (Fisher's exact test), Q value = 0.042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 23(11Q22.2) MUTATED | 10 | 17 | 5 | 19 | 20 |
AMP PEAK 23(11Q22.2) WILD-TYPE | 77 | 43 | 36 | 113 | 54 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 24(12P12.1) MUTATED | 38 | 52 | 21 | 21 | 0 |
AMP PEAK 24(12P12.1) WILD-TYPE | 40 | 94 | 100 | 40 | 2 |
P value = 0.0235 (Fisher's exact test), Q value = 0.062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 24(12P12.1) MUTATED | 17 | 22 | 17 | 43 | 30 |
AMP PEAK 24(12P12.1) WILD-TYPE | 70 | 38 | 24 | 89 | 44 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 25(12Q15) MUTATED | 27 | 58 | 25 | 8 | 0 |
AMP PEAK 25(12Q15) WILD-TYPE | 51 | 88 | 96 | 53 | 2 |
P value = 0.0255 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 25(12Q15) MUTATED | 22 | 44 | 12 | 18 | 22 |
AMP PEAK 25(12Q15) WILD-TYPE | 50 | 91 | 26 | 85 | 34 |
P value = 0.0091 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 25(12Q15) MUTATED | 41 | 40 | 37 |
AMP PEAK 25(12Q15) WILD-TYPE | 77 | 72 | 137 |
P value = 0.00397 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 25(12Q15) MUTATED | 16 | 28 | 36 | 9 | 29 |
AMP PEAK 25(12Q15) WILD-TYPE | 89 | 46 | 78 | 16 | 58 |
P value = 0.0363 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 25(12Q15) MUTATED | 67 | 33 | 18 |
AMP PEAK 25(12Q15) WILD-TYPE | 199 | 50 | 38 |
P value = 0.0026 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 25(12Q15) MUTATED | 43 | 20 | 40 | 14 |
AMP PEAK 25(12Q15) WILD-TYPE | 81 | 31 | 87 | 78 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 25(12Q15) MUTATED | 23 | 28 | 19 | 37 | 10 |
AMP PEAK 25(12Q15) WILD-TYPE | 64 | 32 | 22 | 95 | 64 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 26(13Q22.1) MUTATED | 32 | 56 | 16 | 24 | 0 |
AMP PEAK 26(13Q22.1) WILD-TYPE | 46 | 90 | 105 | 37 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 27(16P13.2) MUTATED | 17 | 49 | 10 | 9 | 2 |
AMP PEAK 27(16P13.2) WILD-TYPE | 61 | 97 | 111 | 52 | 0 |
P value = 0.00044 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 27(16P13.2) MUTATED | 26 | 43 | 9 | 9 |
AMP PEAK 27(16P13.2) WILD-TYPE | 112 | 84 | 54 | 71 |
P value = 0.00818 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 27(16P13.2) MUTATED | 12 | 28 | 6 | 18 | 23 |
AMP PEAK 27(16P13.2) WILD-TYPE | 60 | 107 | 32 | 85 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 28(16P11.2) MUTATED | 15 | 57 | 10 | 14 | 2 |
AMP PEAK 28(16P11.2) WILD-TYPE | 63 | 89 | 111 | 47 | 0 |
P value = 0.019 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 28(16P11.2) MUTATED | 32 | 42 | 12 | 12 |
AMP PEAK 28(16P11.2) WILD-TYPE | 106 | 85 | 51 | 68 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 29(16Q22.1) MUTATED | 13 | 72 | 11 | 11 | 1 |
AMP PEAK 29(16Q22.1) WILD-TYPE | 65 | 74 | 110 | 50 | 1 |
P value = 0.00466 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 29(16Q22.1) MUTATED | 41 | 18 | 48 |
AMP PEAK 29(16Q22.1) WILD-TYPE | 77 | 94 | 126 |
P value = 0.0147 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 29(16Q22.1) MUTATED | 59 | 31 | 18 |
AMP PEAK 29(16Q22.1) WILD-TYPE | 207 | 52 | 38 |
P value = 0.0292 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 29(16Q22.1) MUTATED | 40 | 18 | 23 | 26 |
AMP PEAK 29(16Q22.1) WILD-TYPE | 84 | 33 | 104 | 66 |
P value = 0.00468 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 30(17P11.2) MUTATED | 19 | 39 | 13 | 16 | 1 |
AMP PEAK 30(17P11.2) WILD-TYPE | 59 | 107 | 108 | 45 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 31(17Q11.2) MUTATED | 54 | 79 | 22 | 19 | 0 |
AMP PEAK 31(17Q11.2) WILD-TYPE | 24 | 67 | 99 | 42 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 31(17Q11.2) MUTATED | 37 | 74 | 26 | 37 |
AMP PEAK 31(17Q11.2) WILD-TYPE | 101 | 53 | 37 | 43 |
P value = 0.00052 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
AMP PEAK 31(17Q11.2) MUTATED | 27 | 69 | 15 | 29 | 33 |
AMP PEAK 31(17Q11.2) WILD-TYPE | 45 | 66 | 23 | 74 | 23 |
P value = 0.00031 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 31(17Q11.2) MUTATED | 62 | 56 | 55 |
AMP PEAK 31(17Q11.2) WILD-TYPE | 56 | 56 | 119 |
P value = 0.00248 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 31(17Q11.2) MUTATED | 53 | 29 | 62 | 26 |
AMP PEAK 31(17Q11.2) WILD-TYPE | 71 | 22 | 65 | 66 |
P value = 0.01 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 31(17Q11.2) MUTATED | 35 | 30 | 17 | 68 | 20 |
AMP PEAK 31(17Q11.2) WILD-TYPE | 52 | 30 | 24 | 64 | 54 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 32(17Q12) MUTATED | 53 | 67 | 25 | 20 | 0 |
AMP PEAK 32(17Q12) WILD-TYPE | 25 | 79 | 96 | 41 | 2 |
P value = 0.0325 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 32(17Q12) MUTATED | 43 | 61 | 25 | 36 |
AMP PEAK 32(17Q12) WILD-TYPE | 95 | 66 | 38 | 44 |
P value = 0.0352 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 32(17Q12) MUTATED | 50 | 55 | 59 |
AMP PEAK 32(17Q12) WILD-TYPE | 68 | 57 | 115 |
P value = 0.0371 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
AMP PEAK 32(17Q12) MUTATED | 33 | 38 | 53 | 10 | 30 |
AMP PEAK 32(17Q12) WILD-TYPE | 72 | 36 | 61 | 15 | 57 |
P value = 0.00909 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 32(17Q12) MUTATED | 45 | 28 | 60 | 28 |
AMP PEAK 32(17Q12) WILD-TYPE | 79 | 23 | 67 | 64 |
P value = 0.00909 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 32(17Q12) MUTATED | 31 | 33 | 14 | 62 | 21 |
AMP PEAK 32(17Q12) WILD-TYPE | 56 | 27 | 27 | 70 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 33(17Q23.3) MUTATED | 59 | 80 | 31 | 23 | 1 |
AMP PEAK 33(17Q23.3) WILD-TYPE | 19 | 66 | 90 | 38 | 1 |
P value = 0.0321 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 33(17Q23.3) MUTATED | 57 | 73 | 25 | 39 |
AMP PEAK 33(17Q23.3) WILD-TYPE | 81 | 54 | 38 | 41 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 34(19Q12) MUTATED | 37 | 87 | 17 | 22 | 1 |
AMP PEAK 34(19Q12) WILD-TYPE | 41 | 59 | 104 | 39 | 1 |
P value = 0.00235 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 34(19Q12) MUTATED | 43 | 68 | 24 | 29 |
AMP PEAK 34(19Q12) WILD-TYPE | 95 | 59 | 39 | 51 |
P value = 0.0427 (Fisher's exact test), Q value = 0.097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
AMP PEAK 34(19Q12) MUTATED | 96 | 40 | 28 |
AMP PEAK 34(19Q12) WILD-TYPE | 170 | 43 | 28 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 35(19Q13.43) MUTATED | 35 | 80 | 18 | 22 | 0 |
AMP PEAK 35(19Q13.43) WILD-TYPE | 43 | 66 | 103 | 39 | 2 |
P value = 0.00636 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
AMP PEAK 35(19Q13.43) MUTATED | 39 | 61 | 21 | 34 |
AMP PEAK 35(19Q13.43) WILD-TYPE | 99 | 66 | 42 | 46 |
P value = 0.0472 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
AMP PEAK 35(19Q13.43) MUTATED | 42 | 27 | 53 | 29 |
AMP PEAK 35(19Q13.43) WILD-TYPE | 82 | 24 | 74 | 63 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 36(20Q11.21) MUTATED | 68 | 112 | 38 | 44 | 1 |
AMP PEAK 36(20Q11.21) WILD-TYPE | 10 | 34 | 83 | 17 | 1 |
P value = 0.0267 (Fisher's exact test), Q value = 0.068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
AMP PEAK 36(20Q11.21) MUTATED | 87 | 64 | 110 |
AMP PEAK 36(20Q11.21) WILD-TYPE | 31 | 48 | 64 |
P value = 0.0469 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
AMP PEAK 36(20Q11.21) MUTATED | 57 | 48 | 30 | 81 | 43 |
AMP PEAK 36(20Q11.21) WILD-TYPE | 30 | 12 | 11 | 51 | 31 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
AMP PEAK 37(22Q12.2) MUTATED | 17 | 45 | 10 | 15 | 0 |
AMP PEAK 37(22Q12.2) WILD-TYPE | 61 | 101 | 111 | 46 | 2 |
P value = 0.016 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 1(1P36.11) MUTATED | 35 | 36 | 11 | 9 |
DEL PEAK 1(1P36.11) WILD-TYPE | 103 | 91 | 52 | 71 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 2(1Q32.1) MUTATED | 16 | 33 | 7 | 16 | 0 |
DEL PEAK 2(1Q32.1) WILD-TYPE | 62 | 113 | 114 | 45 | 2 |
P value = 0.0279 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 2(1Q32.1) MUTATED | 18 | 33 | 11 | 10 |
DEL PEAK 2(1Q32.1) WILD-TYPE | 120 | 94 | 52 | 70 |
P value = 0.0447 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 2(1Q32.1) MUTATED | 28 | 21 | 22 |
DEL PEAK 2(1Q32.1) WILD-TYPE | 90 | 91 | 152 |
P value = 0.00127 (Fisher's exact test), Q value = 0.0061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 3(2Q22.1) MUTATED | 29 | 55 | 24 | 24 | 2 |
DEL PEAK 3(2Q22.1) WILD-TYPE | 49 | 91 | 97 | 37 | 0 |
P value = 0.0077 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 3(2Q22.1) MUTATED | 36 | 57 | 18 | 23 |
DEL PEAK 3(2Q22.1) WILD-TYPE | 102 | 70 | 45 | 57 |
P value = 0.00036 (Fisher's exact test), Q value = 0.0022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 3(2Q22.1) MUTATED | 21 | 51 | 8 | 22 | 30 |
DEL PEAK 3(2Q22.1) WILD-TYPE | 51 | 84 | 30 | 81 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 4(2Q34) MUTATED | 33 | 85 | 19 | 36 | 1 |
DEL PEAK 4(2Q34) WILD-TYPE | 45 | 61 | 102 | 25 | 1 |
P value = 0.00098 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 4(2Q34) MUTATED | 47 | 72 | 21 | 34 |
DEL PEAK 4(2Q34) WILD-TYPE | 91 | 55 | 42 | 46 |
P value = 0.00662 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 4(2Q34) MUTATED | 45 | 39 | 56 |
DEL PEAK 4(2Q34) WILD-TYPE | 77 | 75 | 48 |
P value = 0.00767 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 4(2Q34) MUTATED | 29 | 64 | 7 | 42 | 30 |
DEL PEAK 4(2Q34) WILD-TYPE | 43 | 71 | 31 | 61 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 5(2Q37.1) MUTATED | 40 | 100 | 28 | 38 | 1 |
DEL PEAK 5(2Q37.1) WILD-TYPE | 38 | 46 | 93 | 23 | 1 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 5(2Q37.1) MUTATED | 54 | 80 | 27 | 46 |
DEL PEAK 5(2Q37.1) WILD-TYPE | 84 | 47 | 36 | 34 |
P value = 0.0434 (Fisher's exact test), Q value = 0.098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 5(2Q37.1) MUTATED | 55 | 49 | 61 |
DEL PEAK 5(2Q37.1) WILD-TYPE | 67 | 65 | 43 |
P value = 0.0255 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 5(2Q37.1) MUTATED | 32 | 79 | 13 | 47 | 33 |
DEL PEAK 5(2Q37.1) WILD-TYPE | 40 | 56 | 25 | 56 | 23 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 6(3P14.2) MUTATED | 23 | 60 | 18 | 15 | 1 |
DEL PEAK 6(3P14.2) WILD-TYPE | 55 | 86 | 103 | 46 | 1 |
P value = 0.0278 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 6(3P14.2) MUTATED | 50 | 28 | 13 | 26 |
DEL PEAK 6(3P14.2) WILD-TYPE | 88 | 99 | 50 | 54 |
P value = 0.00015 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 6(3P14.2) MUTATED | 37 | 18 | 42 |
DEL PEAK 6(3P14.2) WILD-TYPE | 85 | 96 | 62 |
P value = 0.0104 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 6(3P14.2) MUTATED | 28 | 22 | 35 | 12 |
DEL PEAK 6(3P14.2) WILD-TYPE | 62 | 99 | 63 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 6(3P14.2) MUTATED | 12 | 24 | 15 | 48 | 16 |
DEL PEAK 6(3P14.2) WILD-TYPE | 60 | 111 | 23 | 55 | 40 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 6(3P14.2) MUTATED | 27 | 19 | 69 |
DEL PEAK 6(3P14.2) WILD-TYPE | 91 | 93 | 105 |
P value = 0.00094 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 6(3P14.2) MUTATED | 46 | 22 | 21 | 8 | 20 |
DEL PEAK 6(3P14.2) WILD-TYPE | 59 | 52 | 93 | 17 | 67 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 6(3P14.2) MUTATED | 29 | 13 | 29 | 44 |
DEL PEAK 6(3P14.2) WILD-TYPE | 95 | 38 | 98 | 48 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 6(3P14.2) MUTATED | 16 | 16 | 16 | 31 | 36 |
DEL PEAK 6(3P14.2) WILD-TYPE | 71 | 44 | 25 | 101 | 38 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 7(4Q22.1) MUTATED | 36 | 74 | 16 | 34 | 1 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 42 | 72 | 105 | 27 | 1 |
P value = 0.00112 (Fisher's exact test), Q value = 0.0056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 7(4Q22.1) MUTATED | 51 | 27 | 48 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 71 | 87 | 56 |
P value = 0.0105 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 7(4Q22.1) MUTATED | 43 | 34 | 41 | 8 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 47 | 87 | 57 | 23 |
P value = 0.0179 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 7(4Q22.1) MUTATED | 26 | 44 | 10 | 50 | 28 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 46 | 91 | 28 | 53 | 28 |
P value = 0.00122 (Fisher's exact test), Q value = 0.0061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 7(4Q22.1) MUTATED | 52 | 28 | 78 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 66 | 84 | 96 |
P value = 0.0133 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 7(4Q22.1) MUTATED | 53 | 27 | 33 | 13 | 35 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 52 | 47 | 81 | 12 | 52 |
P value = 0.0284 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 7(4Q22.1) MUTATED | 32 | 22 | 17 | 43 | 41 |
DEL PEAK 7(4Q22.1) WILD-TYPE | 55 | 38 | 24 | 89 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 8(4Q34.2) MUTATED | 36 | 85 | 16 | 39 | 1 |
DEL PEAK 8(4Q34.2) WILD-TYPE | 42 | 61 | 105 | 22 | 1 |
P value = 0.041 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 8(4Q34.2) MUTATED | 55 | 37 | 82 |
DEL PEAK 8(4Q34.2) WILD-TYPE | 63 | 75 | 92 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 9(5Q12.1) MUTATED | 46 | 102 | 21 | 32 | 1 |
DEL PEAK 9(5Q12.1) WILD-TYPE | 32 | 44 | 100 | 29 | 1 |
P value = 0.00141 (Fisher's exact test), Q value = 0.0068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 9(5Q12.1) MUTATED | 66 | 79 | 21 | 36 |
DEL PEAK 9(5Q12.1) WILD-TYPE | 72 | 48 | 42 | 44 |
P value = 0.00456 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 9(5Q12.1) MUTATED | 73 | 46 | 82 |
DEL PEAK 9(5Q12.1) WILD-TYPE | 45 | 66 | 92 |
P value = 0.00182 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 9(5Q12.1) MUTATED | 45 | 49 | 46 | 17 | 45 |
DEL PEAK 9(5Q12.1) WILD-TYPE | 60 | 25 | 68 | 8 | 42 |
P value = 0.0121 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 9(5Q12.1) MUTATED | 119 | 52 | 31 |
DEL PEAK 9(5Q12.1) WILD-TYPE | 147 | 31 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 10(6P25.3) MUTATED | 36 | 47 | 7 | 15 | 1 |
DEL PEAK 10(6P25.3) WILD-TYPE | 42 | 99 | 114 | 46 | 1 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 10(6P25.3) MUTATED | 25 | 51 | 14 | 16 |
DEL PEAK 10(6P25.3) WILD-TYPE | 113 | 76 | 49 | 64 |
P value = 0.0391 (Fisher's exact test), Q value = 0.091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 10(6P25.3) MUTATED | 34 | 24 | 38 |
DEL PEAK 10(6P25.3) WILD-TYPE | 88 | 90 | 66 |
P value = 0.0148 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 10(6P25.3) MUTATED | 42 | 26 | 36 |
DEL PEAK 10(6P25.3) WILD-TYPE | 76 | 86 | 138 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 11(6Q21) MUTATED | 54 | 99 | 16 | 21 | 0 |
DEL PEAK 11(6Q21) WILD-TYPE | 24 | 47 | 105 | 40 | 2 |
P value = 0.00299 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 11(6Q21) MUTATED | 42 | 48 | 44 | 10 | 45 |
DEL PEAK 11(6Q21) WILD-TYPE | 63 | 26 | 70 | 15 | 42 |
P value = 0.0147 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 11(6Q21) MUTATED | 112 | 50 | 27 |
DEL PEAK 11(6Q21) WILD-TYPE | 154 | 33 | 29 |
P value = 0.00625 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 11(6Q21) MUTATED | 36 | 37 | 27 | 58 | 29 |
DEL PEAK 11(6Q21) WILD-TYPE | 51 | 23 | 14 | 74 | 45 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 12(6Q27) MUTATED | 55 | 100 | 14 | 21 | 0 |
DEL PEAK 12(6Q27) WILD-TYPE | 23 | 46 | 107 | 40 | 2 |
P value = 0.0107 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 12(6Q27) MUTATED | 69 | 47 | 73 |
DEL PEAK 12(6Q27) WILD-TYPE | 49 | 65 | 101 |
P value = 0.0137 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 12(6Q27) MUTATED | 39 | 46 | 48 | 12 | 44 |
DEL PEAK 12(6Q27) WILD-TYPE | 66 | 28 | 66 | 13 | 43 |
P value = 0.0108 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 12(6Q27) MUTATED | 111 | 50 | 28 |
DEL PEAK 12(6Q27) WILD-TYPE | 155 | 33 | 28 |
P value = 0.00281 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 12(6Q27) MUTATED | 37 | 37 | 28 | 56 | 29 |
DEL PEAK 12(6Q27) WILD-TYPE | 50 | 23 | 13 | 76 | 45 |
P value = 0.00051 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 13(7Q36.3) MUTATED | 10 | 28 | 6 | 16 | 0 |
DEL PEAK 13(7Q36.3) WILD-TYPE | 68 | 118 | 115 | 45 | 2 |
P value = 0.0325 (Fisher's exact test), Q value = 0.078
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 13(7Q36.3) MUTATED | 7 | 15 | 3 | 23 | 12 |
DEL PEAK 13(7Q36.3) WILD-TYPE | 65 | 120 | 35 | 80 | 44 |
P value = 0.0208 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 13(7Q36.3) MUTATED | 11 | 6 | 21 | 22 |
DEL PEAK 13(7Q36.3) WILD-TYPE | 113 | 45 | 106 | 70 |
P value = 0.0297 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 13(7Q36.3) MUTATED | 5 | 10 | 5 | 24 | 16 |
DEL PEAK 13(7Q36.3) WILD-TYPE | 82 | 50 | 36 | 108 | 58 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 14(8P23.3) MUTATED | 30 | 130 | 34 | 48 | 1 |
DEL PEAK 14(8P23.3) WILD-TYPE | 48 | 16 | 87 | 13 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 14(8P23.3) MUTATED | 89 | 93 | 22 | 39 |
DEL PEAK 14(8P23.3) WILD-TYPE | 49 | 34 | 41 | 41 |
P value = 0.00841 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 14(8P23.3) MUTATED | 57 | 56 | 66 | 20 |
DEL PEAK 14(8P23.3) WILD-TYPE | 33 | 65 | 32 | 11 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 14(8P23.3) MUTATED | 46 | 74 | 11 | 70 | 41 |
DEL PEAK 14(8P23.3) WILD-TYPE | 26 | 61 | 27 | 33 | 15 |
P value = 0.00013 (Fisher's exact test), Q value = 0.00097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 14(8P23.3) MUTATED | 85 | 51 | 106 |
DEL PEAK 14(8P23.3) WILD-TYPE | 33 | 61 | 68 |
P value = 0.00979 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 14(8P23.3) MUTATED | 144 | 58 | 39 |
DEL PEAK 14(8P23.3) WILD-TYPE | 122 | 25 | 17 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 15(8P21.3) MUTATED | 33 | 135 | 34 | 49 | 1 |
DEL PEAK 15(8P21.3) WILD-TYPE | 45 | 11 | 87 | 12 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 15(8P21.3) MUTATED | 90 | 95 | 25 | 42 |
DEL PEAK 15(8P21.3) WILD-TYPE | 48 | 32 | 38 | 38 |
P value = 0.0336 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 15(8P21.3) MUTATED | 60 | 62 | 67 | 21 |
DEL PEAK 15(8P21.3) WILD-TYPE | 30 | 59 | 31 | 10 |
P value = 0.00091 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 15(8P21.3) MUTATED | 46 | 80 | 13 | 76 | 36 |
DEL PEAK 15(8P21.3) WILD-TYPE | 26 | 55 | 25 | 27 | 20 |
P value = 0.00865 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 15(8P21.3) MUTATED | 83 | 57 | 111 |
DEL PEAK 15(8P21.3) WILD-TYPE | 35 | 55 | 63 |
P value = 0.00448 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 15(8P21.3) MUTATED | 150 | 63 | 37 |
DEL PEAK 15(8P21.3) WILD-TYPE | 116 | 20 | 19 |
P value = 0.0497 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 15(8P21.3) MUTATED | 75 | 36 | 69 | 65 |
DEL PEAK 15(8P21.3) WILD-TYPE | 49 | 15 | 58 | 27 |
P value = 0.0419 (Fisher's exact test), Q value = 0.096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 15(8P21.3) MUTATED | 47 | 46 | 27 | 76 | 49 |
DEL PEAK 15(8P21.3) WILD-TYPE | 40 | 14 | 14 | 56 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 16(9P23) MUTATED | 32 | 89 | 52 | 3 | 1 |
DEL PEAK 16(9P23) WILD-TYPE | 46 | 57 | 69 | 58 | 1 |
P value = 0.00098 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 16(9P23) MUTATED | 41 | 65 | 31 | 40 |
DEL PEAK 16(9P23) WILD-TYPE | 97 | 62 | 32 | 40 |
P value = 0.0216 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 16(9P23) MUTATED | 44 | 61 | 42 |
DEL PEAK 16(9P23) WILD-TYPE | 78 | 53 | 62 |
P value = 0.00463 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 16(9P23) MUTATED | 39 | 66 | 30 | 12 |
DEL PEAK 16(9P23) WILD-TYPE | 51 | 55 | 68 | 19 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 16(9P23) MUTATED | 31 | 66 | 26 | 30 | 24 |
DEL PEAK 16(9P23) WILD-TYPE | 41 | 69 | 12 | 73 | 32 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 16(9P23) MUTATED | 61 | 60 | 56 |
DEL PEAK 16(9P23) WILD-TYPE | 57 | 52 | 118 |
P value = 0.00272 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 16(9P23) MUTATED | 29 | 39 | 57 | 12 | 39 |
DEL PEAK 16(9P23) WILD-TYPE | 76 | 35 | 57 | 13 | 48 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 16(9P23) MUTATED | 57 | 28 | 66 | 21 |
DEL PEAK 16(9P23) WILD-TYPE | 67 | 23 | 61 | 71 |
P value = 0.00286 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 16(9P23) MUTATED | 35 | 33 | 22 | 63 | 19 |
DEL PEAK 16(9P23) WILD-TYPE | 52 | 27 | 19 | 69 | 55 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 17(9P21.3) MUTATED | 47 | 105 | 77 | 9 | 1 |
DEL PEAK 17(9P21.3) WILD-TYPE | 31 | 41 | 44 | 52 | 1 |
P value = 0.00591 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 17(9P21.3) MUTATED | 48 | 83 | 47 | 22 |
DEL PEAK 17(9P21.3) WILD-TYPE | 42 | 38 | 51 | 9 |
P value = 0.00037 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 17(9P21.3) MUTATED | 36 | 85 | 33 | 51 | 33 |
DEL PEAK 17(9P21.3) WILD-TYPE | 36 | 50 | 5 | 52 | 23 |
P value = 0.0223 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 17(9P21.3) MUTATED | 75 | 74 | 89 |
DEL PEAK 17(9P21.3) WILD-TYPE | 43 | 38 | 85 |
P value = 0.00414 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 17(9P21.3) MUTATED | 74 | 35 | 83 | 40 |
DEL PEAK 17(9P21.3) WILD-TYPE | 50 | 16 | 44 | 52 |
P value = 0.0119 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 17(9P21.3) MUTATED | 44 | 41 | 31 | 80 | 36 |
DEL PEAK 17(9P21.3) WILD-TYPE | 43 | 19 | 10 | 52 | 38 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 18(9Q22.33) MUTATED | 39 | 77 | 53 | 9 | 0 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 39 | 69 | 68 | 52 | 2 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 18(9Q22.33) MUTATED | 36 | 67 | 33 | 42 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 102 | 60 | 30 | 38 |
P value = 0.00036 (Fisher's exact test), Q value = 0.0022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 18(9Q22.33) MUTATED | 44 | 66 | 35 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 78 | 48 | 69 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 18(9Q22.33) MUTATED | 40 | 76 | 21 | 8 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 50 | 45 | 77 | 23 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 18(9Q22.33) MUTATED | 30 | 75 | 26 | 21 | 26 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 42 | 60 | 12 | 82 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 18(9Q22.33) MUTATED | 64 | 68 | 46 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 54 | 44 | 128 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 18(9Q22.33) MUTATED | 25 | 35 | 70 | 11 | 36 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 80 | 39 | 44 | 14 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 18(9Q22.33) MUTATED | 52 | 29 | 77 | 15 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 72 | 22 | 50 | 77 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 18(9Q22.33) MUTATED | 34 | 34 | 20 | 73 | 12 |
DEL PEAK 18(9Q22.33) WILD-TYPE | 53 | 26 | 21 | 59 | 62 |
P value = 0.012 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 19(10P11.21) MUTATED | 15 | 33 | 11 | 14 | 1 |
DEL PEAK 19(10P11.21) WILD-TYPE | 63 | 113 | 110 | 47 | 1 |
P value = 0.0308 (Fisher's exact test), Q value = 0.075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 19(10P11.21) MUTATED | 7 | 18 | 10 | 25 | 12 |
DEL PEAK 19(10P11.21) WILD-TYPE | 65 | 117 | 28 | 78 | 44 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 20(10Q23.31) MUTATED | 46 | 71 | 18 | 33 | 0 |
DEL PEAK 20(10Q23.31) WILD-TYPE | 32 | 75 | 103 | 28 | 2 |
P value = 0.0275 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 20(10Q23.31) MUTATED | 48 | 66 | 23 | 31 |
DEL PEAK 20(10Q23.31) WILD-TYPE | 90 | 61 | 40 | 49 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 21(11P15.5) MUTATED | 46 | 113 | 35 | 16 | 1 |
DEL PEAK 21(11P15.5) WILD-TYPE | 32 | 33 | 86 | 45 | 1 |
P value = 0.00067 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 21(11P15.5) MUTATED | 52 | 77 | 38 | 44 |
DEL PEAK 21(11P15.5) WILD-TYPE | 86 | 50 | 25 | 36 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 21(11P15.5) MUTATED | 56 | 72 | 37 | 10 |
DEL PEAK 21(11P15.5) WILD-TYPE | 34 | 49 | 61 | 21 |
P value = 0.00293 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 21(11P15.5) MUTATED | 36 | 86 | 21 | 40 | 25 |
DEL PEAK 21(11P15.5) WILD-TYPE | 36 | 49 | 17 | 63 | 31 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 21(11P15.5) MUTATED | 76 | 66 | 66 |
DEL PEAK 21(11P15.5) WILD-TYPE | 42 | 46 | 108 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 21(11P15.5) MUTATED | 35 | 48 | 69 | 13 | 45 |
DEL PEAK 21(11P15.5) WILD-TYPE | 70 | 26 | 45 | 12 | 42 |
P value = 0.0182 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 21(11P15.5) MUTATED | 126 | 54 | 30 |
DEL PEAK 21(11P15.5) WILD-TYPE | 140 | 29 | 26 |
P value = 0.00081 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 21(11P15.5) MUTATED | 72 | 31 | 71 | 31 |
DEL PEAK 21(11P15.5) WILD-TYPE | 52 | 20 | 56 | 61 |
P value = 0.00188 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 21(11P15.5) MUTATED | 45 | 41 | 24 | 70 | 25 |
DEL PEAK 21(11P15.5) WILD-TYPE | 42 | 19 | 17 | 62 | 49 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 22(11Q23.3) MUTATED | 39 | 70 | 24 | 19 | 1 |
DEL PEAK 22(11Q23.3) WILD-TYPE | 39 | 76 | 97 | 42 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 23(11Q25) MUTATED | 34 | 71 | 20 | 17 | 2 |
DEL PEAK 23(11Q25) WILD-TYPE | 44 | 75 | 101 | 44 | 0 |
P value = 0.0154 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 24(12P13.1) MUTATED | 12 | 34 | 11 | 10 | 1 |
DEL PEAK 24(12P13.1) WILD-TYPE | 66 | 112 | 110 | 51 | 1 |
P value = 0.00514 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 24(12P13.1) MUTATED | 14 | 33 | 11 | 10 |
DEL PEAK 24(12P13.1) WILD-TYPE | 124 | 94 | 52 | 70 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 24(12P13.1) MUTATED | 16 | 36 | 4 | 5 | 6 |
DEL PEAK 24(12P13.1) WILD-TYPE | 56 | 99 | 34 | 98 | 50 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 24(12P13.1) MUTATED | 34 | 18 | 15 |
DEL PEAK 24(12P13.1) WILD-TYPE | 84 | 94 | 159 |
P value = 0.00994 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 24(12P13.1) MUTATED | 7 | 15 | 24 | 3 | 19 |
DEL PEAK 24(12P13.1) WILD-TYPE | 98 | 59 | 90 | 22 | 68 |
P value = 0.0118 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 24(12P13.1) MUTATED | 26 | 11 | 24 | 6 |
DEL PEAK 24(12P13.1) WILD-TYPE | 98 | 40 | 103 | 86 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 25(12Q24.33) MUTATED | 14 | 42 | 9 | 22 | 1 |
DEL PEAK 25(12Q24.33) WILD-TYPE | 64 | 104 | 112 | 39 | 1 |
P value = 0.0218 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 25(12Q24.33) MUTATED | 19 | 35 | 3 | 24 | 6 |
DEL PEAK 25(12Q24.33) WILD-TYPE | 53 | 100 | 35 | 79 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 26(13Q14.2) MUTATED | 45 | 53 | 13 | 43 | 2 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 33 | 93 | 108 | 18 | 0 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 26(13Q14.2) MUTATED | 43 | 30 | 59 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 79 | 84 | 45 |
P value = 0.0163 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 26(13Q14.2) MUTATED | 36 | 40 | 49 | 7 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 54 | 81 | 49 | 24 |
P value = 0.0161 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 26(13Q14.2) MUTATED | 26 | 41 | 10 | 50 | 26 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 46 | 94 | 28 | 53 | 30 |
P value = 0.00977 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 26(13Q14.2) MUTATED | 43 | 31 | 79 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 75 | 81 | 95 |
P value = 0.00104 (Fisher's exact test), Q value = 0.0053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 26(13Q14.2) MUTATED | 53 | 29 | 33 | 15 | 26 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 52 | 45 | 81 | 10 | 61 |
P value = 0.00721 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 26(13Q14.2) MUTATED | 38 | 17 | 50 | 49 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 86 | 34 | 77 | 43 |
P value = 0.00215 (Fisher's exact test), Q value = 0.0094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 26(13Q14.2) MUTATED | 26 | 23 | 15 | 46 | 44 |
DEL PEAK 26(13Q14.2) WILD-TYPE | 61 | 37 | 26 | 86 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 27(14Q24.1) MUTATED | 31 | 83 | 10 | 13 | 0 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 47 | 63 | 111 | 48 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 27(14Q24.1) MUTATED | 36 | 66 | 23 | 12 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 102 | 61 | 40 | 68 |
P value = 0.00145 (Fisher's exact test), Q value = 0.0069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 27(14Q24.1) MUTATED | 27 | 56 | 8 | 21 | 24 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 45 | 79 | 30 | 82 | 32 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 27(14Q24.1) MUTATED | 64 | 35 | 37 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 54 | 77 | 137 |
P value = 0.00369 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 27(14Q24.1) MUTATED | 23 | 37 | 38 | 9 | 29 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 82 | 37 | 76 | 16 | 58 |
P value = 0.00416 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 27(14Q24.1) MUTATED | 76 | 40 | 20 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 190 | 43 | 36 |
P value = 0.00161 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 27(14Q24.1) MUTATED | 50 | 25 | 40 | 19 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 74 | 26 | 87 | 73 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 27(14Q24.1) MUTATED | 27 | 31 | 20 | 43 | 13 |
DEL PEAK 27(14Q24.1) WILD-TYPE | 60 | 29 | 21 | 89 | 61 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 28(15Q13.1) MUTATED | 38 | 79 | 9 | 33 | 1 |
DEL PEAK 28(15Q13.1) WILD-TYPE | 40 | 67 | 112 | 28 | 1 |
P value = 0.00226 (Fisher's exact test), Q value = 0.0098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 28(15Q13.1) MUTATED | 56 | 63 | 14 | 27 |
DEL PEAK 28(15Q13.1) WILD-TYPE | 82 | 64 | 49 | 53 |
P value = 0.00899 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 28(15Q13.1) MUTATED | 26 | 51 | 6 | 47 | 27 |
DEL PEAK 28(15Q13.1) WILD-TYPE | 46 | 84 | 32 | 56 | 29 |
P value = 0.0397 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 28(15Q13.1) MUTATED | 41 | 41 | 39 | 8 | 31 |
DEL PEAK 28(15Q13.1) WILD-TYPE | 64 | 33 | 75 | 17 | 56 |
P value = 0.0104 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 28(15Q13.1) MUTATED | 95 | 45 | 20 |
DEL PEAK 28(15Q13.1) WILD-TYPE | 171 | 38 | 36 |
P value = 0.019 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 28(15Q13.1) MUTATED | 41 | 29 | 46 | 41 |
DEL PEAK 28(15Q13.1) WILD-TYPE | 83 | 22 | 81 | 51 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 29(16P13.3) MUTATED | 41 | 80 | 9 | 43 | 1 |
DEL PEAK 29(16P13.3) WILD-TYPE | 37 | 66 | 112 | 18 | 1 |
P value = 0.0186 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 29(16P13.3) MUTATED | 56 | 66 | 18 | 34 |
DEL PEAK 29(16P13.3) WILD-TYPE | 82 | 61 | 45 | 46 |
P value = 0.00575 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 29(16P13.3) MUTATED | 54 | 36 | 55 |
DEL PEAK 29(16P13.3) WILD-TYPE | 68 | 78 | 49 |
P value = 0.00794 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 29(16P13.3) MUTATED | 32 | 55 | 7 | 51 | 29 |
DEL PEAK 29(16P13.3) WILD-TYPE | 40 | 80 | 31 | 52 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 30(16Q23.1) MUTATED | 45 | 33 | 8 | 33 | 0 |
DEL PEAK 30(16Q23.1) WILD-TYPE | 33 | 113 | 113 | 28 | 2 |
P value = 0.00735 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 30(16Q23.1) MUTATED | 14 | 37 | 7 | 34 | 26 |
DEL PEAK 30(16Q23.1) WILD-TYPE | 58 | 98 | 31 | 69 | 30 |
P value = 0.00534 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 30(16Q23.1) MUTATED | 36 | 24 | 27 | 14 | 18 |
DEL PEAK 30(16Q23.1) WILD-TYPE | 69 | 50 | 87 | 11 | 69 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 31(17P12) MUTATED | 56 | 100 | 29 | 22 | 1 |
DEL PEAK 31(17P12) WILD-TYPE | 22 | 46 | 92 | 39 | 1 |
P value = 0.00056 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 31(17P12) MUTATED | 61 | 84 | 30 | 33 |
DEL PEAK 31(17P12) WILD-TYPE | 77 | 43 | 33 | 47 |
P value = 0.016 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 31(17P12) MUTATED | 73 | 53 | 79 |
DEL PEAK 31(17P12) WILD-TYPE | 45 | 59 | 95 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 32(18Q23) MUTATED | 38 | 86 | 23 | 30 | 2 |
DEL PEAK 32(18Q23) WILD-TYPE | 40 | 60 | 98 | 31 | 0 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 32(18Q23) MUTATED | 42 | 50 | 41 | 8 | 37 |
DEL PEAK 32(18Q23) WILD-TYPE | 63 | 24 | 73 | 17 | 50 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 32(18Q23) MUTATED | 100 | 57 | 21 |
DEL PEAK 32(18Q23) WILD-TYPE | 166 | 26 | 35 |
P value = 0.00307 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 32(18Q23) MUTATED | 54 | 35 | 49 | 39 |
DEL PEAK 32(18Q23) WILD-TYPE | 70 | 16 | 78 | 53 |
P value = 0.00439 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 32(18Q23) MUTATED | 40 | 40 | 15 | 50 | 32 |
DEL PEAK 32(18Q23) WILD-TYPE | 47 | 20 | 26 | 82 | 42 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 33(19P13.3) MUTATED | 32 | 72 | 21 | 19 | 1 |
DEL PEAK 33(19P13.3) WILD-TYPE | 46 | 74 | 100 | 42 | 1 |
P value = 0.0203 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 33(19P13.3) MUTATED | 24 | 35 | 13 | 45 | 26 |
DEL PEAK 33(19P13.3) WILD-TYPE | 48 | 100 | 25 | 58 | 30 |
P value = 0.00089 (Fisher's exact test), Q value = 0.0047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 33(19P13.3) MUTATED | 49 | 24 | 70 |
DEL PEAK 33(19P13.3) WILD-TYPE | 69 | 88 | 104 |
P value = 0.0385 (Fisher's exact test), Q value = 0.09
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 33(19P13.3) MUTATED | 39 | 36 | 31 | 10 | 27 |
DEL PEAK 33(19P13.3) WILD-TYPE | 66 | 38 | 83 | 15 | 60 |
P value = 1e-05 (Fisher's exact test), Q value = 9.7e-05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 78 | 146 | 121 | 61 | 2 |
DEL PEAK 34(22Q13.32) MUTATED | 40 | 89 | 10 | 49 | 0 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 38 | 57 | 111 | 12 | 2 |
P value = 0.00199 (Fisher's exact test), Q value = 0.0088
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 34(22Q13.32) MUTATED | 72 | 65 | 16 | 35 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 66 | 62 | 47 | 45 |
P value = 0.0297 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 122 | 114 | 104 |
DEL PEAK 34(22Q13.32) MUTATED | 66 | 42 | 47 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 56 | 72 | 57 |
P value = 0.00109 (Fisher's exact test), Q value = 0.0055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 90 | 121 | 98 | 31 |
DEL PEAK 34(22Q13.32) MUTATED | 55 | 41 | 47 | 12 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 35 | 80 | 51 | 19 |
P value = 0.00076 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 34(22Q13.32) MUTATED | 32 | 53 | 9 | 62 | 28 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 40 | 82 | 29 | 41 | 28 |
P value = 0.00126 (Fisher's exact test), Q value = 0.0061
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 118 | 112 | 174 |
DEL PEAK 34(22Q13.32) MUTATED | 58 | 35 | 91 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 60 | 77 | 83 |
P value = 0.0427 (Fisher's exact test), Q value = 0.097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 105 | 74 | 114 | 25 | 87 |
DEL PEAK 34(22Q13.32) MUTATED | 56 | 38 | 39 | 12 | 42 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 49 | 36 | 75 | 13 | 45 |
P value = 0.0018 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 124 | 51 | 127 | 92 |
DEL PEAK 34(22Q13.32) MUTATED | 58 | 20 | 48 | 58 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 66 | 31 | 79 | 34 |
P value = 0.0166 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 87 | 60 | 41 | 132 | 74 |
DEL PEAK 34(22Q13.32) MUTATED | 36 | 27 | 21 | 53 | 47 |
DEL PEAK 34(22Q13.32) WILD-TYPE | 51 | 33 | 20 | 79 | 27 |
P value = 0.0416 (Fisher's exact test), Q value = 0.095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 138 | 127 | 63 | 80 |
DEL PEAK 36(XQ21.33) MUTATED | 19 | 33 | 11 | 21 |
DEL PEAK 36(XQ21.33) WILD-TYPE | 119 | 94 | 52 | 59 |
P value = 0.0118 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 72 | 135 | 38 | 103 | 56 |
DEL PEAK 36(XQ21.33) MUTATED | 7 | 30 | 12 | 17 | 17 |
DEL PEAK 36(XQ21.33) WILD-TYPE | 65 | 105 | 26 | 86 | 39 |
P value = 0.0495 (Fisher's exact test), Q value = 0.11
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 266 | 83 | 56 |
DEL PEAK 36(XQ21.33) MUTATED | 60 | 19 | 5 |
DEL PEAK 36(XQ21.33) WILD-TYPE | 206 | 64 | 51 |
-
Copy number data file = all_lesions.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/BLCA-TP/22507728/transformed.cor.cli.txt
-
Molecular subtype file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/BLCA-TP/22541056/BLCA-TP.transferedmergedcluster.txt
-
Number of patients = 408
-
Number of significantly focal cnvs = 73
-
Number of molecular subtypes = 10
-
Exclude genes that fewer than K tumors have alterations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.