Clinical Features CN_CNMF METHLYATION_CNMF RPPA_CNMF RPPA_CHIERARCHICAL MRNASEQ_CNMF MRNASEQ_CHIERARCHICAL MIRSEQ_CNMF MIRSEQ_CHIERARCHICAL MIRSEQ_MATURE_CNMF MIRSEQ_MATURE_CHIERARCHICAL nMutated (%) nWild-Type Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q PBRM1 8 (23%) 27 0.55298 1 0.11716 0.88 0.85223 1 0.2296 0.886 0.13842 0.88 0.31784 0.908 0.80657 1 0.22405 0.886 0.563 1 0.43372 0.996 HLA-B 5 (14%) 30 0.36138 0.968 0.01276 0.418 0.58778 1 0.43553 0.996 0.11569 0.88 0.18444 0.886 0.0070999 0.355 0.01778 0.418 0.72746 1 0.056349 0.768 MLL3 7 (20%) 28 0.11988 0.88 0.31388 0.908 0.31923 0.908 1 1 0.91643 1 0.97924 1 0.16386 0.88 0.73989 1 0.81928 1 0.22325 0.886 FTH1 3 (9%) 32 0.12375 0.88 0.04665 0.7 0.092359 0.88 0.58515 1 0.32673 0.908 0.23047 0.886 1 1 0.66098 1 1 1 0.93286 1 TP53 5 (14%) 30 0.68582 1 1 1 0.52057 1 0.75613 1 0.8669 1 0.9838 1 1 1 0.85394 1 1 1 0.73256 1 ARID1A 5 (14%) 30 1 1 0.59235 1 0.52156 1 0.20896 0.886 0.10936 0.88 0.64875 1 1 1 0.15108 0.88 0.34912 0.952 0.2901 0.908 DDHD1 4 (11%) 31 0.44923 0.996 0.65609 1 0.4722 0.996 0.46815 0.996 0.87086 1 0.91278 1 0.64556 1 0.2062 0.886 0.4686 0.996 0.21396 0.886 MUC2 7 (20%) 28 0.10524 0.88 0.65362 1 0.27919 0.908 0.39831 0.996 0.43712 0.996 0.15067 0.88 0.93241 1 0.2006 0.886 0.56784 1 0.8531 1 IDH1 4 (11%) 31 0.28183 0.908 0.00223 0.334 1 1 0.58474 1 0.29625 0.908 0.44793 0.996 0.0056899 0.355 0.0386 0.7 0.1838 0.886 0.01953 0.418 MUC21 3 (9%) 32 0.66561 1 0.76731 1 NA NA NA NA 0.26169 0.908 0.04434 0.7 1 1 0.73696 1 1 1 0.93306 1 CLIP4 4 (11%) 31 0.81455 1 0.53759 1 0.64659 1 0.88695 1 0.79755 1 0.91409 1 0.90528 1 0.15301 0.88 1 1 0.74676 1 BAP1 6 (17%) 29 0.60047 1 0.73155 1 0.75929 1 0.58899 1 0.50705 1 0.41217 0.996 0.64655 1 0.44426 0.996 0.24237 0.908 0.28227 0.908 CDC27 5 (14%) 30 0.9052 1 0.83449 1 0.32202 0.908 0.067729 0.847 0.70492 1 0.42701 0.996 0.3712 0.977 0.14816 0.88 0.2511 0.908 0.10151 0.88 FAM35A 3 (9%) 32 0.27855 0.908 1 1 NA NA NA NA 1 1 0.7925 1 0.6179 1 0.69298 1 0.19669 0.886 0.01633 0.418 PAXIP1 4 (11%) 31 0.16432 0.88 0.81385 1 1 1 0.77153 1 0.47821 0.996 0.30028 0.908 0.64459 1 0.47477 0.996 0.077919 0.88 0.39752 0.996