GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_LYSOSOME 119 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_LYSOSOME 0.46713 1.7231 0.07472 0.45477 0.674 0.58 0.332 0.39 0.15 0.102 KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY 90 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY 0.54877 1.742 0.006302 0.53806 0.631 0.578 0.306 0.403 0.175 0.119 KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 61 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 0.57578 1.7368 0.00823 0.51304 0.641 0.361 0.174 0.299 0.17033 0.114 KEGG_THYROID_CANCER 29 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_THYROID_CANCER 0.61397 1.7625 0.01538 0.56705 0.588 0.31 0.161 0.261 0.15877 0.124 ST_TUMOR_NECROSIS_FACTOR_PATHWAY 28 http://www.broadinstitute.org/gsea/msigdb/cards/ST_TUMOR_NECROSIS_FACTOR_PATHWAY 0.54625 1.858 0.007678 0.49907 0.361 0.464 0.282 0.334 0 0.091 ST_G_ALPHA_I_PATHWAY 34 http://www.broadinstitute.org/gsea/msigdb/cards/ST_G_ALPHA_I_PATHWAY 0.58326 1.7277 0.002203 0.50955 0.667 0.382 0.209 0.303 0.16792 0.12 ST_GAQ_PATHWAY 27 http://www.broadinstitute.org/gsea/msigdb/cards/ST_GAQ_PATHWAY 0.53978 1.825 0.006122 0.53311 0.442 0.444 0.236 0.34 0 0.098 PID_ERBB2ERBB3PATHWAY 44 http://www.broadinstitute.org/gsea/msigdb/cards/PID_ERBB2ERBB3PATHWAY 0.45971 1.6987 0.01362 0.42995 0.733 0.273 0.233 0.21 0.15914 0.106 REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES 65 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES 0.45981 1.7969 0.032 0.56259 0.504 0.138 0.0868 0.127 0.13134 0.117 REACTOME_TRIGLYCERIDE_BIOSYNTHESIS 38 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRIGLYCERIDE_BIOSYNTHESIS 0.51879 1.7234 0.01706 0.48604 0.674 0.237 0.129 0.207 0.16036 0.112 REACTOME_SIGNALING_BY_ILS 103 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SIGNALING_BY_ILS 0.52218 1.7689 0.004 0.60775 0.57 0.456 0.303 0.32 0.16442 0.132 REACTOME_IL1_SIGNALING 38 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_IL1_SIGNALING 0.58101 1.7584 0.007937 0.52544 0.598 0.316 0.189 0.257 0.14871 0.116 REACTOME_IL_RECEPTOR_SHC_SIGNALING 25 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_IL_RECEPTOR_SHC_SIGNALING 0.61869 1.7159 0.01033 0.42281 0.695 0.52 0.264 0.383 0.1437 0.102 REACTOME_INTERFERON_ALPHA_BETA_SIGNALING 51 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_INTERFERON_ALPHA_BETA_SIGNALING 0.64249 1.7205 0.03463 0.43592 0.68 0.608 0.233 0.468 0.14541 0.102 REACTOME_INTERFERON_SIGNALING 142 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_INTERFERON_SIGNALING 0.54065 1.9782 0.01253 0.98773 0.152 0.387 0.233 0.3 0 0.145 REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING 30 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_NEGATIVE_REGULATORS_OF_RIG_I_MDA5_SIGNALING 0.5644 1.9432 0.01856 0.65271 0.195 0.467 0.289 0.332 0 0.101 REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS 61 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS 0.51479 1.9307 0.01978 0.47813 0.214 0.492 0.309 0.341 0 0.081 REACTOME_INNATE_IMMUNE_SYSTEM 212 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_INNATE_IMMUNE_SYSTEM 0.45125 1.6958 0.01505 0.41519 0.741 0.467 0.303 0.33 0.15696 0.099 REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM 247 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM 0.50715 1.8891 0.006494 0.48469 0.289 0.356 0.233 0.277 0 0.078 REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS 44 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_NUCLEOTIDE_BINDING_DOMAIN_LEUCINE_RICH_REPEAT_CONTAINING_RECEPTOR_NLR_SIGNALING_PATHWAYS 0.53987 1.7069 0.007937 0.42998 0.722 0.432 0.259 0.321 0.15343 0.106