Clinical Features Time to Death YEARS_TO_BIRTH TUMOR_TISSUE_SITE GENDER RADIATION_THERAPY KARNOFSKY_PERFORMANCE_SCORE HISTOLOGICAL_TYPE RACE ETHNICITY nCNV (%) nWild-Type logrank test_P logrank test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Wilcoxon-test_P Wilcoxon-test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q Fisher's exact test_P Fisher's exact test_Q 1p gain 95 (9%) 990 1.4175e-09 2.23e-08 1.6078e-06 1.88e-05 8.2635e-13 1.65e-11 0.51376 0.67 0.078335 0.177 0.0010154 0.00438 9.9999e-06 6.9e-05 0.77666 0.871 0.57133 0.719 1q gain 112 (10%) 973 4.6211e-05 0.000277 2.6343e-06 2.9e-05 9.4352e-10 1.55e-08 0.31213 0.496 0.28965 0.475 0.001614 0.00651 9.9999e-06 6.9e-05 0.40425 0.579 0.42546 0.599 2p gain 51 (5%) 1034 0.0056213 0.0196 0.026012 0.0727 0.003884 0.0142 0.19129 0.349 0.39364 0.572 0.089284 0.194 0.070149 0.164 0.50526 0.663 0.71646 0.836 2q gain 48 (4%) 1037 0.0078621 0.0258 0.015775 0.0483 0.0046539 0.0165 0.37418 0.56 0.15981 0.308 0.058659 0.142 0.072839 0.169 0.34618 0.531 1 1 3p gain 67 (6%) 1018 1.4217e-05 9.63e-05 3.4466e-06 3.53e-05 1.7879e-08 2.49e-07 0.30907 0.494 0.29534 0.481 0.24099 0.417 9.9999e-06 6.9e-05 1 1 0.50852 0.665 3q gain 71 (7%) 1014 1.1002e-07 1.45e-06 3.3804e-07 4.16e-06 4.7511e-11 8.35e-10 0.45544 0.629 0.042625 0.112 0.084187 0.188 9.9999e-06 6.9e-05 0.47553 0.636 0.51321 0.67 4p gain 48 (4%) 1037 0.037611 0.101 0.15886 0.308 0.0046539 0.0165 1 1 0.16216 0.308 0.29135 0.476 0.01107 0.0354 0.26912 0.449 0.71684 0.836 4q gain 43 (4%) 1042 0.0035241 0.0131 0.015663 0.0482 0.00046649 0.00213 0.53139 0.686 0.064313 0.154 0.7464 0.853 0.00358 0.0133 0.28722 0.473 0.25284 0.436 5p gain 60 (6%) 1025 4.6913e-05 0.000279 0.011469 0.0364 3.3501e-06 3.48e-05 0.34585 0.531 0.34785 0.531 0.95066 0.993 2e-05 0.000128 0.41288 0.586 1 1 5q gain 50 (5%) 1035 3.5096e-05 0.000214 0.0012444 0.00522 1.6066e-05 0.000107 0.14346 0.284 0.86471 0.926 0.41366 0.586 3e-04 0.00148 0.20146 0.364 0.2601 0.441 6p gain 35 (3%) 1050 0.30266 0.487 0.77235 0.869 0.025843 0.0725 0.86372 0.926 0.025829 0.0725 0.32814 0.515 0.097979 0.208 0.54853 0.703 0.63399 0.766 6q gain 28 (3%) 1057 0.27702 0.459 0.85152 0.919 0.0016986 0.00681 0.84814 0.918 0.11446 0.237 0.27659 0.459 0.03279 0.0896 0.48409 0.644 0.61916 0.756 7p gain 591 (54%) 494 0 0 3.2868e-55 1.52e-53 4.9123e-84 3.02e-82 0.66543 0.791 1.2423e-11 2.24e-10 2.4525e-13 5.17e-12 9.9999e-06 6.9e-05 0.00203 0.00801 0.029938 0.0821 7q gain 627 (58%) 458 0 0 1.2546e-52 5.45e-51 2.1003e-71 1.11e-69 0.35005 0.531 1.7814e-10 3.06e-09 1.5283e-12 2.89e-11 9.9999e-06 6.9e-05 0.00133 0.00555 0.0074925 0.0248 8p gain 101 (9%) 984 0.60161 0.741 0.66104 0.788 0.83439 0.913 0.9157 0.964 0.45311 0.629 0.58133 0.728 0.5185 0.674 0.21717 0.388 0.28994 0.475 8q gain 117 (11%) 968 0.25561 0.439 0.09741 0.207 0.62441 0.757 0.69201 0.813 0.16103 0.308 0.86337 0.926 0.29633 0.481 0.58265 0.729 0.12706 0.257 9p gain 64 (6%) 1021 0.025417 0.0721 0.013276 0.0413 0.00069424 0.00311 0.067078 0.159 0.12781 0.258 0.26885 0.449 0.00153 0.0062 0.38812 0.568 0.73443 0.849 9q gain 95 (9%) 990 0.0094281 0.0304 0.0073307 0.0244 7.6482e-06 6.88e-05 0.016318 0.0494 0.05643 0.138 0.11113 0.231 5.9999e-05 0.000341 0.61833 0.756 0.7836 0.876 10p gain 70 (6%) 1015 2.0453e-06 2.32e-05 4.9444e-12 9.12e-11 1.5791e-09 2.43e-08 0.90046 0.953 0.2967 0.481 0.0040639 0.0146 9.9999e-06 6.9e-05 0.56317 0.712 0.021841 0.0632 10q gain 12 (1%) 1073 0.84206 0.918 0.052705 0.132 0.078135 0.177 0.25496 0.439 0.3086 0.494 0.162 0.308 0.04338 0.113 0.17098 0.318 0.086055 0.19 11p gain 49 (5%) 1036 0.056144 0.138 0.7038 0.826 0.01215 0.0383 0.46193 0.632 0.12811 0.258 0.1198 0.244 0.01839 0.0543 0.37809 0.561 0.16118 0.308 11q gain 74 (7%) 1011 1.7945e-05 0.000118 0.012315 0.0387 4.4305e-09 6.67e-08 0.46547 0.633 0.16296 0.308 0.0072479 0.0242 9.9999e-06 6.9e-05 0.46978 0.636 0.22298 0.394 12p gain 93 (9%) 992 0.22607 0.395 0.77686 0.871 0.022147 0.0636 0.742 0.852 0.00044662 0.00206 0.45979 0.632 0.14029 0.278 0.90635 0.957 0.57207 0.719 12q gain 65 (6%) 1020 0.0012333 0.0052 0.069389 0.163 0.00016524 0.000835 1 1 0.009429 0.0304 0.07388 0.17 0.0052499 0.0184 0.11824 0.243 0.16791 0.313 13q gain 17 (2%) 1068 0.26278 0.442 0.074141 0.17 0.80749 0.899 0.45808 0.631 0.069004 0.162 0.021037 0.0611 0.83183 0.913 1 1 1 1 14q gain 26 (2%) 1059 0.0018301 0.0073 0.00035027 0.00168 0.0010481 0.0045 0.31566 0.5 0.47532 0.636 0.18497 0.339 0.0065999 0.0222 1 1 0.62386 0.757 15q gain 37 (3%) 1048 0.0059565 0.0204 0.064023 0.154 0.092622 0.199 0.86661 0.926 0.84686 0.918 0.0077056 0.0254 0.23669 0.412 1 1 0.39426 0.572 16p gain 54 (5%) 1031 0.58879 0.732 0.057232 0.139 0.0079271 0.0259 0.25724 0.439 0.048996 0.123 0.36336 0.546 0.04113 0.108 0.34437 0.531 0.16218 0.308 16q gain 57 (5%) 1028 0.33936 0.526 0.30092 0.486 0.040124 0.106 0.40895 0.584 0.15023 0.295 0.4748 0.636 0.01886 0.0552 0.43523 0.607 0.16327 0.308 17p gain 72 (7%) 1013 2.6504e-05 0.000166 7.0068e-06 6.39e-05 0.0014445 0.00592 0.026092 0.0727 1 1 0.73507 0.849 0.00382 0.0141 0.42729 0.599 0.76249 0.864 17q gain 86 (8%) 999 5.6325e-07 6.81e-06 6.2021e-06 5.87e-05 0.00044451 0.00206 0.086964 0.19 0.79183 0.884 0.64732 0.776 0.0057099 0.0198 0.71911 0.837 0.77177 0.869 18p gain 78 (7%) 1007 5.8913e-05 0.00034 0.014543 0.0449 8.2178e-05 0.000446 0.63382 0.766 0.33434 0.519 0.016411 0.0494 0.00073999 0.00325 0.66209 0.788 0.76308 0.864 18q gain 75 (7%) 1010 2.5982e-06 2.9e-05 0.0014158 0.00584 2.0274e-06 2.32e-05 0.39667 0.573 0.048509 0.123 0.022029 0.0635 2e-05 0.000128 0.5054 0.663 0.35652 0.539 19p gain 322 (30%) 763 5.0991e-06 4.97e-05 3.1203e-07 3.9e-06 4.7325e-13 9.7e-12 0.50052 0.66 0.058463 0.142 0.022926 0.0656 9.9999e-06 6.9e-05 0.13886 0.276 0.31323 0.497 19q gain 222 (20%) 863 0 0 5.3345e-16 1.31e-14 7.0434e-35 2.6e-33 0.59388 0.735 2.7421e-06 2.98e-05 5.3489e-05 0.000316 9.9999e-06 6.9e-05 0.01344 0.0417 0.84925 0.918 20p gain 265 (24%) 820 0 0 4.8902e-28 1.57e-26 1.8188e-32 6.39e-31 0.66738 0.792 2.5056e-05 0.000158 2.0772e-05 0.000132 9.9999e-06 6.9e-05 0.085859 0.19 0.10563 0.222 20q gain 262 (24%) 823 0 0 1.0143e-26 3.12e-25 2.2608e-32 7.58e-31 0.42949 0.601 1.6056e-05 0.000107 6.72e-06 6.28e-05 9.9999e-06 6.9e-05 0.077749 0.177 0.10573 0.222 21q gain 88 (8%) 997 0.0031564 0.0119 9.7683e-07 1.16e-05 8.4506e-05 0.000455 0.82184 0.908 0.01767 0.0527 0.10931 0.228 0.00081999 0.00358 0.095999 0.205 0.044554 0.115 22q gain 57 (5%) 1028 0.27478 0.458 0.17587 0.324 0.49614 0.655 0.89071 0.944 0.52249 0.675 0.075992 0.173 0.0090299 0.0294 0.92254 0.97 0.06653 0.158 xp gain 35 (3%) 1050 0.086556 0.19 0.17252 0.32 0.30175 0.486 0.16259 0.308 0.22564 0.395 0.23273 0.406 0.16429 0.309 0.54993 0.703 0.31714 0.501 xq gain 57 (5%) 1028 0.0023601 0.00912 0.00033527 0.00162 0.00035802 0.0017 0.05341 0.133 0.6227 0.757 0.028043 0.0772 0.00019 0.000954 0.71607 0.836 0.0039939 0.0145 1p loss 200 (18%) 885 0 0 3.4599e-05 0.000213 4.7449e-51 1.95e-49 0.38386 0.565 1.1562e-18 3.16e-17 2.8767e-06 3.08e-05 9.9999e-06 6.9e-05 0.084439 0.188 0.24088 0.417 1q loss 46 (4%) 1039 0.057144 0.139 0.46348 0.632 0.0061638 0.021 0.64741 0.776 0.071938 0.167 0.52211 0.675 0.00024 0.0012 0.81624 0.906 0.71676 0.836 2p loss 54 (5%) 1031 0.16525 0.31 0.066131 0.158 0.40174 0.577 0.32646 0.514 0.41048 0.585 0.35056 0.531 0.47235 0.636 0.60129 0.741 0.26671 0.447 2q loss 52 (5%) 1033 0.18298 0.336 0.19753 0.358 0.11986 0.244 0.38784 0.568 0.73807 0.851 0.35903 0.542 0.072989 0.169 0.64208 0.773 0.26317 0.442 3p loss 70 (6%) 1015 0.36043 0.543 0.35065 0.531 0.46118 0.632 0.61777 0.756 0.027203 0.0755 0.033867 0.0919 0.88186 0.94 0.81962 0.907 0.20076 0.363 3q loss 62 (6%) 1023 0.39058 0.571 0.994 1 1 1 1 1 0.11543 0.239 0.39988 0.575 0.99665 1 0.47865 0.639 0.73443 0.849 4p loss 127 (12%) 958 0.054797 0.136 0.88378 0.941 0.03778 0.101 0.035492 0.0957 0.26126 0.441 0.76649 0.865 0.00037 0.00175 0.25614 0.439 0.47284 0.636 4q loss 149 (14%) 936 9.0688e-05 0.000485 0.017706 0.0527 6.5871e-05 0.000371 0.47524 0.636 0.045967 0.118 0.58751 0.732 7.9999e-05 0.000441 0.74345 0.852 0.65124 0.778 5p loss 80 (7%) 1005 0.49147 0.651 0.99704 1 0.72778 0.845 1 1 0.0021018 0.00825 0.24213 0.418 0.04721 0.12 0.46593 0.633 0.76435 0.864 5q loss 80 (7%) 1005 0.84744 0.918 0.97883 1 0.41642 0.589 0.55737 0.709 0.00072966 0.00322 0.43568 0.607 0.084719 0.188 0.84063 0.918 0.55792 0.709 6p loss 117 (11%) 968 1.1448e-12 2.22e-11 0.00012462 0.000639 5.1138e-06 4.97e-05 0.69201 0.813 0.41137 0.585 0.086463 0.19 7.9999e-05 0.000441 0.04371 0.114 0.21842 0.389 6q loss 188 (17%) 897 1.4056e-08 2.03e-07 0.00070948 0.00315 3.8619e-05 0.000234 0.22374 0.394 0.068614 0.162 0.00389 0.0142 2e-05 0.000128 0.01759 0.0527 0.095362 0.205 7p loss 10 (1%) 1075 0.62316 0.757 0.13543 0.271 0.34928 0.531 0.74963 0.855 0.46347 0.632 0.84387 0.918 0.7811 0.875 0.60702 0.747 1 1 7q loss 9 (1%) 1076 0.93049 0.975 0.091925 0.199 1 1 0.74221 0.852 0.68733 0.81 0.20297 0.365 0.74654 0.853 0.56256 0.712 1 1 8p loss 75 (7%) 1010 0.00011502 0.000598 0.00027928 0.00138 7.0093e-06 6.39e-05 0.39667 0.573 0.0061312 0.0209 0.4575 0.631 0.00031 0.00152 0.0058099 0.02 0.76247 0.864 8q loss 52 (5%) 1033 4.28e-06 4.33e-05 0.00032438 0.00157 9.3317e-05 0.000492 0.38784 0.568 0.016027 0.0489 0.79865 0.89 0.00489 0.0173 0.15136 0.296 1 1 9p loss 316 (29%) 769 5.3383e-06 5.12e-05 9.2327e-05 0.00049 9.6463e-06 6.9e-05 1 1 0.00044929 0.00206 0.035547 0.0957 5.9999e-05 0.000341 0.11948 0.244 0.060297 0.145 9q loss 141 (13%) 944 0.001879 0.00746 0.0022836 0.00887 0.0050541 0.0178 0.85502 0.92 0.00094863 0.00412 0.0012294 0.0052 0.050609 0.127 0.092679 0.199 0.25746 0.439 10p loss 559 (52%) 526 0 0 2.0169e-74 1.14e-72 1.938e-116 1.43e-114 0.084592 0.188 1.2307e-15 2.93e-14 2.696e-19 7.65e-18 9.9999e-06 6.9e-05 0.00228 0.00887 0.0029811 0.0113 10q loss 587 (54%) 498 0 0 2.1487e-68 1.06e-66 9.588e-116 6.43e-114 0.17471 0.323 1.3986e-18 3.69e-17 6.8831e-21 2.03e-19 9.9999e-06 6.9e-05 0.004 0.0145 0.00061683 0.00278 11p loss 162 (15%) 923 0.15061 0.295 0.84741 0.918 0.040358 0.106 0.024567 0.07 0.011489 0.0364 0.65117 0.778 0.00042 0.00196 0.58804 0.732 0.3838 0.565 11q loss 112 (10%) 973 1.4001e-09 2.23e-08 8.9353e-06 6.9e-05 2.3535e-10 3.95e-09 0.6861 0.81 0.018674 0.0549 0.03304 0.09 9.9999e-06 6.9e-05 1 1 0.11615 0.239 12p loss 84 (8%) 1001 0.0066163 0.0222 0.046084 0.118 0.0043138 0.0155 0.64734 0.776 0.34687 0.531 0.27885 0.461 0.0178 0.0528 0.22169 0.393 0.57067 0.719 12q loss 108 (10%) 977 0.95081 0.993 0.99612 1 0.68591 0.81 0.53932 0.693 0.8099 0.9 0.96204 1 0.02566 0.0725 0.04862 0.123 0.61267 0.752 13q loss 298 (27%) 787 0.0015167 0.00618 0.05337 0.133 0.0001011 0.000529 0.33436 0.519 0.016185 0.0492 0.09587 0.205 0.00337 0.0126 0.536 0.69 0.22446 0.394 14q loss 226 (21%) 859 5.4436e-05 0.000319 7.3191e-05 0.000409 0.00012938 0.000658 0.49567 0.655 0.29034 0.475 0.040342 0.106 0.00109 0.00465 0.056399 0.138 0.080487 0.181 15q loss 154 (14%) 931 0.0028755 0.0109 5.8008e-05 0.000337 8.1283e-05 0.000444 0.9298 0.975 0.7568 0.862 0.18714 0.342 0.00275 0.0105 0.91569 0.964 0.82478 0.908 16p loss 78 (7%) 1007 1.8214e-07 2.32e-06 4.4028e-06 4.39e-05 1.2718e-07 1.65e-06 0.40746 0.583 0.16137 0.308 0.42705 0.599 9.9999e-06 6.9e-05 0.88472 0.941 1 1 16q loss 104 (10%) 981 5.8616e-08 7.87e-07 2.9418e-05 0.000182 1.227e-08 1.81e-07 0.83453 0.913 0.019643 0.0573 0.12376 0.251 9.9999e-06 6.9e-05 0.26085 0.441 1 1 17p loss 78 (7%) 1007 7.818e-06 6.9e-05 0.0001184 0.000611 2.9782e-08 4.07e-07 0.34043 0.526 0.16137 0.308 0.0026977 0.0104 9.9999e-06 6.9e-05 1 1 0.54819 0.703 17q loss 51 (5%) 1034 1.1136e-05 7.61e-05 0.00038261 0.0018 9.7412e-06 6.9e-05 0.46838 0.635 0.39242 0.572 0.027694 0.0765 0.00060999 0.00276 0.63501 0.766 0.45403 0.629 18p loss 137 (13%) 948 0.33315 0.519 0.10109 0.214 0.85483 0.92 0.13858 0.276 0.51539 0.671 0.48807 0.648 0.43586 0.607 0.21887 0.389 1 1 18q loss 123 (11%) 962 0.13028 0.261 0.47339 0.636 0.50212 0.661 0.56064 0.711 0.30589 0.491 0.60101 0.741 0.14608 0.287 0.16627 0.311 0.33358 0.519 19p loss 57 (5%) 1028 0.14467 0.285 0.15909 0.308 0.17483 0.323 0.89071 0.944 1 1 0.10206 0.215 0.58927 0.732 0.39429 0.572 0.27988 0.462 19q loss 244 (22%) 841 0 0 1.6477e-08 2.34e-07 2.5522e-46 9.91e-45 0.37693 0.561 1.1622e-13 2.6e-12 3.0076e-06 3.17e-05 9.9999e-06 6.9e-05 0.48158 0.642 0.0095209 0.0305 20p loss 26 (2%) 1059 0.22275 0.394 0.76492 0.864 0.045622 0.118 0.10888 0.228 0.16605 0.311 0.57285 0.719 0.26012 0.441 0.066429 0.158 0.29985 0.485 20q loss 21 (2%) 1064 0.21354 0.383 0.38134 0.564 0.013243 0.0413 0.073398 0.169 0.61967 0.756 0.83174 0.913 0.076039 0.173 0.3696 0.554 0.5915 0.734 21q loss 78 (7%) 1007 0.72832 0.845 0.33397 0.519 0.9065 0.957 0.34043 0.526 0.32215 0.508 0.83501 0.913 0.03583 0.0962 0.74327 0.852 0.55792 0.709 22q loss 240 (22%) 845 2.1538e-14 4.97e-13 2.041e-13 4.43e-12 4.5649e-17 1.16e-15 0.94091 0.985 0.0013471 0.00559 0.0064728 0.0219 9.9999e-06 6.9e-05 0.42372 0.598 0.19507 0.355 xp loss 211 (19%) 874 0.82341 0.908 0.39803 0.574 0.81819 0.907 0.31202 0.496 0.52099 0.675 0.37577 0.561 0.96865 1 0.55823 0.709 0.11892 0.244 xq loss 174 (16%) 911 0.089488 0.194 0.21249 0.382 0.046955 0.12 0.86682 0.926 0.37619 0.561 0.088145 0.192 0.38115 0.564 0.45062 0.626 0.67504 0.8