GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val PID_INTEGRIN3_PATHWAY 43 http://www.broadinstitute.org/gsea/msigdb/cards/PID_INTEGRIN3_PATHWAY 0.63784 1.6134 0.04192 0.71151 0.919 0.698 0.17 0.58 0.35995 0.206 PID_ILK_PATHWAY 45 http://www.broadinstitute.org/gsea/msigdb/cards/PID_ILK_PATHWAY 0.50864 1.9301 0.01606 0.53191 0.313 0.489 0.303 0.342 0 0.107 PID_SYNDECAN_2_PATHWAY 33 http://www.broadinstitute.org/gsea/msigdb/cards/PID_SYNDECAN_2_PATHWAY 0.55291 1.7224 0.02464 0.71438 0.767 0.364 0.145 0.311 0.24543 0.177 REACTOME_ER_PHAGOSOME_PATHWAY 58 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ER_PHAGOSOME_PATHWAY 0.51563 1.5718 0.1071 0.67091 0.949 0.759 0.399 0.457 0.38181 0.205 REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION 83 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_EXTRACELLULAR_MATRIX_ORGANIZATION 0.63937 1.5801 0.04102 0.75826 0.944 0.675 0.123 0.594 0.42344 0.231 REACTOME_COLLAGEN_FORMATION 58 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_COLLAGEN_FORMATION 0.67256 1.5778 0.03607 0.72405 0.945 0.707 0.123 0.622 0.40335 0.22 REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CHONDROITIN_SULFATE_DERMATAN_SULFATE_METABOLISM 0.58338 1.6335 0.01193 0.79855 0.899 0.617 0.197 0.496 0.36931 0.222 REACTOME_MRNA_CAPPING 29 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MRNA_CAPPING 0.5195 1.7255 0.02905 0.81967 0.763 0.517 0.278 0.374 0.27724 0.198 REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS 26 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS 0.40346 1.647 0.04225 0.9014 0.884 0.577 0.358 0.371 0.40691 0.248 REACTOME_PROTEIN_FOLDING 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_PROTEIN_FOLDING 0.44235 1.8819 0.01235 0.39395 0.404 0.551 0.34 0.364 0 0.091 REACTOME_ACTIVATION_OF_CHAPERONE_GENES_BY_XBP1S 44 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ACTIVATION_OF_CHAPERONE_GENES_BY_XBP1S 0.4012 1.7425 0.03055 0.87607 0.729 0.409 0.327 0.276 0.28465 0.197 REACTOME_PERK_REGULATED_GENE_EXPRESSION 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_PERK_REGULATED_GENE_EXPRESSION 0.49912 1.627 0.05501 0.70361 0.904 0.444 0.235 0.34 0.33089 0.198 REACTOME_UNFOLDED_PROTEIN_RESPONSE 76 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_UNFOLDED_PROTEIN_RESPONSE 0.39217 1.9794 0.00998 0.70837 0.221 0.5 0.357 0.323 0 0.143 REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX 29 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX 0.48079 1.6461 0.05451 0.81582 0.887 0.483 0.286 0.345 0.36956 0.225 REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE 77 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE 0.43725 1.5651 0.1163 0.66497 0.958 0.662 0.399 0.4 0.38408 0.206 REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN 28 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN 0.51918 1.883 0.008097 0.52042 0.401 0.75 0.377 0.468 0 0.114 REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER 26 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER 0.43782 1.7056 0.0233 0.69469 0.79 0.538 0.341 0.356 0.25462 0.18 REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX 33 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX 0.47775 1.6277 0.05943 0.75821 0.902 0.485 0.278 0.351 0.35604 0.214 REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1 64 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1 0.4776 1.5764 0.104 0.68981 0.947 0.656 0.399 0.396 0.38853 0.209 REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS 65 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS 0.48516 1.5984 0.1002 0.72609 0.929 0.677 0.399 0.408 0.37704 0.217