name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-2K-A9WE-01A-11D-A382-10	64	62	2	47	3.125000e-02	1	exome+100bp flanks	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-2Z-A9J1-01A-11D-A382-10	110	109	1	85	9.090909e-03	0	coding only	34834024	22	79	6.315664e-07	2.267898e-06
TCGA-2Z-A9J2-01A-11D-A382-10	91	89	2	70	2.197802e-02	0	coding only	34834024	17	63	4.880286e-07	1.808577e-06
TCGA-2Z-A9J3-01A-12D-A382-10	148	144	4	116	2.702703e-02	0	coding only	34834024	25	109	7.176891e-07	3.129125e-06
TCGA-2Z-A9J5-01A-21D-A382-10	103	102	1	82	9.708738e-03	0	coding only	34834024	18	74	5.167362e-07	2.124360e-06
TCGA-2Z-A9J6-01A-11D-A382-10	55	54	1	44	1.818182e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-2Z-A9J7-01A-11D-A382-10	47	46	1	33	2.127660e-02	1	exome+100bp flanks	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-2Z-A9J8-01A-11D-A42J-10	32	30	2	26	6.250000e-02	1	exome+100bp flanks	34834024	4	24	1.148303e-07	6.889816e-07
TCGA-2Z-A9JD-01A-11D-A42J-10	116	108	8	81	6.896552e-02	1	exome+100bp flanks	34834024	25	74	7.176891e-07	2.124360e-06
TCGA-2Z-A9JE-01A-11D-A42J-10	92	91	1	74	1.086957e-02	0	coding only	34834024	15	70	4.306135e-07	2.009530e-06
TCGA-2Z-A9JG-01A-11D-A42J-10	83	83	0	66	0	0	coding only	34834024	16	60	4.593210e-07	1.722454e-06
TCGA-2Z-A9JI-01A-11D-A42J-10	13	12	1	10	7.692308e-02	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-2Z-A9JJ-01A-11D-A42J-10	24	24	0	21	0	1	exome+100bp flanks	34834024	3	21	8.612269e-08	6.028589e-07
TCGA-2Z-A9JK-01A-11D-A42J-10	87	87	0	74	0	0	coding only	34834024	13	70	3.731983e-07	2.009530e-06
TCGA-2Z-A9JL-01A-11D-A42J-10	97	94	3	76	3.092784e-02	1	exome+100bp flanks	34834024	17	69	4.880286e-07	1.980822e-06
TCGA-2Z-A9JM-01A-12D-A42J-10	69	66	3	50	4.347826e-02	1	exome+100bp flanks	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-2Z-A9JN-01A-21D-A42J-10	30	29	1	20	3.333333e-02	1	exome+100bp flanks	34834024	9	17	2.583681e-07	4.880286e-07
TCGA-2Z-A9JO-01A-11D-A42J-10	41	40	1	28	2.439024e-02	1	exome+100bp flanks	34834024	11	25	3.157832e-07	7.176891e-07
TCGA-2Z-A9JP-01A-11D-A42J-10	63	59	4	49	6.349206e-02	1	exome+100bp flanks	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-2Z-A9JQ-01A-11D-A42J-10	89	87	2	61	2.247191e-02	0	coding only	34834024	25	59	7.176891e-07	1.693746e-06
TCGA-2Z-A9JR-01A-12D-A42J-10	55	55	0	44	0	0	coding only	34834024	11	41	3.157832e-07	1.177010e-06
TCGA-2Z-A9JS-01A-21D-A42J-10	121	121	0	95	0	0	coding only	34834024	24	94	6.889816e-07	2.698511e-06
TCGA-2Z-A9JT-01A-11D-A42J-10	83	82	1	66	1.204819e-02	0	coding only	34834024	14	62	4.019059e-07	1.779869e-06
TCGA-4A-A93W-01A-11D-A36X-10	104	101	3	78	2.884615e-02	0	coding only	34834024	23	75	6.602740e-07	2.153067e-06
TCGA-4A-A93X-01A-11D-A36X-10	102	100	2	84	1.960784e-02	0	coding only	34834024	16	74	4.593210e-07	2.124360e-06
TCGA-4A-A93Y-01A-11D-A36X-10	26	25	1	20	3.846154e-02	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-5P-A9JU-01A-11D-A42J-10	87	84	3	69	3.448276e-02	1	exome+100bp flanks	34834024	14	66	4.019059e-07	1.894699e-06
TCGA-5P-A9JV-01A-12D-A42J-10	59	58	1	44	1.694915e-02	0	coding only	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-5P-A9JW-01A-11D-A42J-10	86	85	1	70	1.162791e-02	0	coding only	34834024	11	64	3.157832e-07	1.837284e-06
TCGA-5P-A9JY-01A-11D-A42J-10	127	125	2	104	1.574803e-02	0	coding only	34834024	20	97	5.741513e-07	2.784634e-06
TCGA-5P-A9JZ-01A-11D-A42J-10	53	53	0	43	0	0	coding only	34834024	10	40	2.870756e-07	1.148303e-06
TCGA-5P-A9K0-01A-11D-A42J-10	95	93	2	73	2.105263e-02	0	coding only	34834024	19	68	5.454437e-07	1.952114e-06
TCGA-5P-A9K2-01A-11D-A42J-10	81	81	0	64	0	0	coding only	34834024	16	62	4.593210e-07	1.779869e-06
TCGA-5P-A9K3-01A-11D-A42J-10	73	72	1	58	1.369863e-02	0	coding only	34834024	14	57	4.019059e-07	1.636331e-06
TCGA-5P-A9K6-01A-11D-A42J-10	56	53	3	40	5.357143e-02	1	exome+100bp flanks	34834024	10	31	2.870756e-07	8.899345e-07
TCGA-5P-A9K8-01A-11D-A42J-10	21	21	0	16	0	1	exome+100bp flanks	34834024	5	12	1.435378e-07	3.444908e-07
TCGA-5P-A9KA-01A-11D-A42J-10	102	100	2	82	1.960784e-02	0	coding only	34834024	17	76	4.880286e-07	2.181775e-06
TCGA-5P-A9KC-01A-11D-A42J-10	90	88	2	74	2.222222e-02	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-5P-A9KE-01A-11D-A42J-10	88	86	2	64	2.272727e-02	0	coding only	34834024	22	61	6.315664e-07	1.751161e-06
TCGA-5P-A9KH-01A-11D-A42J-10	25	24	1	17	4.000000e-02	1	exome+100bp flanks	34834024	7	16	2.009530e-07	4.593210e-07
TCGA-A3-3308-01A-01W-0886-08	366	345	21	291	5.737705e-02	1	exome+100bp flanks	34834024	52	272	1.492793e-06	7.808458e-06
TCGA-A3-3311-01A-01D-0966-08	68	62	6	52	8.823529e-02	1	exome+100bp flanks	34834024	9	50	2.583681e-07	1.435378e-06
TCGA-A3-3313-01A-01D-0966-08	141	125	16	103	1.134752e-01	1	exome+100bp flanks	34834024	19	97	5.454437e-07	2.784634e-06
TCGA-A3-3313-01A-01W-0886-08	464	433	31	374	6.681034e-02	1	exome+100bp flanks	34834024	52	345	1.492793e-06	9.904110e-06
TCGA-A3-3316-01A-01W-0886-08	457	438	19	383	4.157549e-02	1	exome+100bp flanks	34834024	52	360	1.492793e-06	1.033472e-05
TCGA-A3-3317-01A-01D-0966-08	79	75	4	54	5.063291e-02	1	exome+100bp flanks	34834024	19	51	5.454437e-07	1.464086e-06
TCGA-A3-3319-01A-01W-0886-08	345	319	26	273	7.536232e-02	1	exome+100bp flanks	34834024	44	259	1.263133e-06	7.435259e-06
TCGA-A3-3320-01A-01W-0886-08	344	319	25	268	7.267442e-02	1	exome+100bp flanks	34834024	50	249	1.435378e-06	7.148184e-06
TCGA-A3-3322-01A-01W-0886-08	134	126	8	95	5.970149e-02	1	exome+100bp flanks	34834024	30	92	8.612269e-07	2.641096e-06
TCGA-A3-3323-01A-01D-0966-08	52	51	1	41	1.923077e-02	0	coding only	34834024	10	38	2.870756e-07	1.090887e-06
TCGA-A3-3326-01A-01D-0966-08	58	56	2	38	3.448276e-02	1	exome+100bp flanks	34834024	18	33	5.167362e-07	9.473496e-07
TCGA-A3-3331-01A-01W-0886-08	164	151	13	113	7.926829e-02	1	exome+100bp flanks	34834024	36	108	1.033472e-06	3.100417e-06
TCGA-A3-3346-01A-01W-0886-08	589	554	35	449	5.942275e-02	1	exome+100bp flanks	34834024	98	421	2.813341e-06	1.208588e-05
TCGA-A3-3347-01A-02D-1386-10	38	36	2	24	5.263158e-02	1	exome+100bp flanks	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-A3-3349-01A-01D-1251-10	43	41	2	35	4.651163e-02	1	exome+100bp flanks	34834024	4	32	1.148303e-07	9.186421e-07
TCGA-A3-3357-01A-02D-1421-08	102	97	5	75	4.901961e-02	1	exome+100bp flanks	34834024	21	69	6.028589e-07	1.980822e-06
TCGA-A3-3358-01A-01D-1534-10	74	69	5	50	6.756757e-02	1	exome+100bp flanks	34834024	18	44	5.167362e-07	1.263133e-06
TCGA-A3-3362-01A-02D-1386-10	54	51	3	39	5.555556e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-A3-3363-01A-01W-0886-08	1197	1134	63	1029	5.263158e-02	1	exome+100bp flanks	34834024	102	967	2.928172e-06	2.776022e-05
TCGA-A3-3365-01A-01W-0886-08	358	333	25	288	6.983240e-02	1	exome+100bp flanks	34834024	37	273	1.062180e-06	7.837165e-06
TCGA-A3-3367-01A-02D-1421-08	75	70	5	56	6.666667e-02	1	exome+100bp flanks	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-A3-3370-01A-02D-1421-08	43	42	1	35	2.325581e-02	1	exome+100bp flanks	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-A3-3372-01A-01W-0886-08	184	168	16	143	8.695652e-02	1	exome+100bp flanks	34834024	24	135	6.889816e-07	3.875521e-06
TCGA-A3-3373-01A-02D-1421-08	63	59	4	48	6.349206e-02	1	exome+100bp flanks	34834024	10	44	2.870756e-07	1.263133e-06
TCGA-A3-3374-01A-01D-0966-08	57	43	14	30	2.456140e-01	1	exome+100bp flanks	34834024	11	26	3.157832e-07	7.463967e-07
TCGA-A3-3374-01A-01W-0886-08	848	790	58	688	6.839623e-02	1	exome+100bp flanks	34834024	96	643	2.755926e-06	1.845896e-05
TCGA-A3-3376-01A-02D-1421-08	53	52	1	42	1.886792e-02	0	coding only	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-A3-3378-01A-01W-0886-08	266	245	21	209	7.894737e-02	1	exome+100bp flanks	34834024	35	198	1.004765e-06	5.684098e-06
TCGA-A3-3380-01A-01W-0886-08	249	230	19	206	7.630522e-02	1	exome+100bp flanks	34834024	21	192	6.028589e-07	5.511852e-06
TCGA-A3-3382-01A-01W-0886-08	556	526	30	472	5.395683e-02	1	exome+100bp flanks	34834024	54	437	1.550208e-06	1.254521e-05
TCGA-A3-3383-01A-01W-0886-08	161	144	17	131	1.055901e-01	1	exome+100bp flanks	34834024	13	120	3.731983e-07	3.444908e-06
TCGA-A3-3385-01A-02D-1421-08	66	65	1	52	1.515152e-02	0	coding only	34834024	12	50	3.444908e-07	1.435378e-06
TCGA-A3-3385-01A-02W-1475-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-A3-3387-01A-01D-1534-10	87	83	4	68	4.597701e-02	1	exome+100bp flanks	34834024	12	60	3.444908e-07	1.722454e-06
TCGA-A4-7286-01A-11D-2136-08	40	39	1	30	2.500000e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-A4-7287-01A-11D-2136-08	40	40	0	30	0	1	exome+100bp flanks	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-A4-7288-01A-11D-2136-08	75	74	1	58	1.333333e-02	0	coding only	34834024	14	53	4.019059e-07	1.521501e-06
TCGA-A4-7583-01A-11D-2136-08	76	76	0	56	0	0	coding only	34834024	18	53	5.167362e-07	1.521501e-06
TCGA-A4-7584-01A-11D-2136-08	77	73	4	57	5.194805e-02	1	exome+100bp flanks	34834024	14	52	4.019059e-07	1.492793e-06
TCGA-A4-7585-01A-11D-2136-08	68	67	1	57	1.470588e-02	0	coding only	34834024	9	54	2.583681e-07	1.550208e-06
TCGA-A4-7732-01A-11D-2136-08	47	47	0	43	0	1	exome+100bp flanks	34834024	4	39	1.148303e-07	1.119595e-06
TCGA-A4-7734-01A-11D-2136-08	51	51	0	39	0	0	coding only	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-A4-7828-01A-11D-2136-08	31	30	1	27	3.225806e-02	1	exome+100bp flanks	34834024	3	25	8.612269e-08	7.176891e-07
TCGA-A4-7915-01A-11D-2201-08	29	29	0	26	0	1	exome+100bp flanks	34834024	3	23	8.612269e-08	6.602740e-07
TCGA-A4-7996-01A-11D-2201-08	87	86	1	69	1.149425e-02	0	coding only	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-A4-7997-01A-11D-2201-08	72	71	1	56	1.388889e-02	0	coding only	34834024	15	52	4.306135e-07	1.492793e-06
TCGA-A4-8098-01A-11D-2396-08	95	94	1	69	1.052632e-02	0	coding only	34834024	23	64	6.602740e-07	1.837284e-06
TCGA-A4-8310-01A-11D-2396-08	77	76	1	55	1.298701e-02	0	coding only	34834024	21	51	6.028589e-07	1.464086e-06
TCGA-A4-8311-01A-11D-2396-08	62	61	1	41	1.612903e-02	0	coding only	34834024	20	40	5.741513e-07	1.148303e-06
TCGA-A4-8312-01A-11D-2396-08	22	22	0	14	0	1	exome+100bp flanks	34834024	6	12	1.722454e-07	3.444908e-07
TCGA-A4-8515-01A-11D-2396-08	57	56	1	46	1.754386e-02	0	coding only	34834024	10	46	2.870756e-07	1.320548e-06
TCGA-A4-8517-01A-11D-2396-08	79	76	3	52	3.797468e-02	1	exome+100bp flanks	34834024	24	49	6.889816e-07	1.406671e-06
TCGA-A4-8518-01A-11D-2396-08	22	21	1	15	4.545455e-02	1	exome+100bp flanks	34834024	5	13	1.435378e-07	3.731983e-07
TCGA-A4-8630-01A-11D-2396-08	53	52	1	40	1.886792e-02	0	coding only	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-A4-A48D-01A-11D-A25F-10	97	95	2	73	2.061856e-02	0	coding only	34834024	20	68	5.741513e-07	1.952114e-06
TCGA-A4-A4ZT-01A-11D-A26P-10	60	59	1	51	1.666667e-02	0	coding only	34834024	8	44	2.296605e-07	1.263133e-06
TCGA-A4-A57E-01A-11D-A26P-10	89	88	1	68	1.123596e-02	0	coding only	34834024	17	60	4.880286e-07	1.722454e-06
TCGA-A4-A5DU-01A-11D-A28G-10	32	31	1	26	3.125000e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-A4-A5XZ-01A-11D-A31X-10	40	38	2	29	5.000000e-02	1	exome+100bp flanks	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-A4-A5Y0-01A-11D-A31X-10	57	55	2	50	3.508772e-02	1	exome+100bp flanks	34834024	5	48	1.435378e-07	1.377963e-06
TCGA-A4-A5Y1-01A-11D-A28G-10	78	77	1	59	1.282051e-02	0	coding only	34834024	16	51	4.593210e-07	1.464086e-06
TCGA-A4-A6HP-01A-11D-A31X-10	91	90	1	69	1.098901e-02	0	coding only	34834024	21	63	6.028589e-07	1.808577e-06
TCGA-A4-A772-01A-11D-A33Q-10	47	46	1	33	2.127660e-02	1	exome+100bp flanks	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-A4-A7UZ-01A-12D-A34Z-10	59	59	0	49	0	0	coding only	34834024	9	46	2.583681e-07	1.320548e-06
TCGA-AK-3425-01A-02D-1361-10	76	75	1	58	1.315789e-02	0	coding only	34834024	15	55	4.306135e-07	1.578916e-06
TCGA-AK-3427-01A-01D-0966-08	35	29	6	23	1.714286e-01	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-AK-3427-01A-01W-0886-08	317	292	25	261	7.886435e-02	1	exome+100bp flanks	34834024	31	246	8.899345e-07	7.062061e-06
TCGA-AK-3428-01A-02D-1361-10	78	75	3	56	3.846154e-02	1	exome+100bp flanks	34834024	18	53	5.167362e-07	1.521501e-06
TCGA-AK-3429-01A-02D-1386-10	36	31	5	22	1.388889e-01	1	exome+100bp flanks	34834024	9	18	2.583681e-07	5.167362e-07
TCGA-AK-3430-01A-01D-1251-10	78	75	3	63	3.846154e-02	1	exome+100bp flanks	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-AK-3430-01A-01W-1244-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-AK-3431-01A-02D-1361-10	74	73	1	59	1.351351e-02	0	coding only	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-AK-3434-01A-02D-1361-10	73	69	4	51	5.479452e-02	1	exome+100bp flanks	34834024	17	44	4.880286e-07	1.263133e-06
TCGA-AK-3436-01A-02D-1386-10	61	56	5	44	8.196721e-02	1	exome+100bp flanks	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-AK-3440-01A-01D-0966-08	42	33	9	28	2.142857e-01	1	exome+100bp flanks	34834024	5	28	1.435378e-07	8.038118e-07
TCGA-AK-3440-01A-01W-0886-08	217	199	18	181	8.294931e-02	1	exome+100bp flanks	34834024	17	171	4.880286e-07	4.908994e-06
TCGA-AK-3443-01A-01D-0966-08	25	15	10	13	4.000000e-01	2	all capture (no interval list)	65505363	2	11	3.053185e-08	1.679252e-07
TCGA-AK-3443-01A-01W-0886-08	124	110	14	100	1.129032e-01	1	exome+100bp flanks	34834024	9	90	2.583681e-07	2.583681e-06
TCGA-AK-3444-01A-01W-0886-08	416	394	22	349	5.288462e-02	1	exome+100bp flanks	34834024	44	326	1.263133e-06	9.358666e-06
TCGA-AK-3445-01A-02W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-AK-3447-01A-01W-0886-08	279	253	26	220	9.318996e-02	1	exome+100bp flanks	34834024	31	204	8.899345e-07	5.856343e-06
TCGA-AK-3450-01A-02W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-AK-3451-01A-02D-1251-10	92	86	6	75	6.521739e-02	1	exome+100bp flanks	34834024	11	72	3.157832e-07	2.066945e-06
TCGA-AK-3451-01A-02W-1244-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-AK-3453-01A-01D-0966-08	40	37	3	24	7.500000e-02	1	exome+100bp flanks	34834024	12	23	3.444908e-07	6.602740e-07
TCGA-AK-3453-01A-01W-0886-08	185	169	16	134	8.648649e-02	1	exome+100bp flanks	34834024	31	122	8.899345e-07	3.502323e-06
TCGA-AK-3454-01A-02D-1361-10	60	59	1	42	1.666667e-02	0	coding only	34834024	17	40	4.880286e-07	1.148303e-06
TCGA-AK-3455-01A-01D-0966-08	67	64	3	54	4.477612e-02	1	exome+100bp flanks	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-AK-3456-01A-02D-1386-10	46	43	3	28	6.521739e-02	1	exome+100bp flanks	34834024	15	24	4.306135e-07	6.889816e-07
TCGA-AK-3458-01A-01D-1501-10	34	31	3	26	8.823529e-02	1	exome+100bp flanks	34834024	5	25	1.435378e-07	7.176891e-07
TCGA-AK-3460-01A-02D-1361-10	74	71	3	55	4.054054e-02	1	exome+100bp flanks	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-AK-3461-01A-02D-1361-10	54	53	1	40	1.851852e-02	0	coding only	34834024	13	40	3.731983e-07	1.148303e-06
TCGA-AK-3465-01A-01D-0966-08	38	33	5	26	1.315789e-01	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-AK-3465-01A-01W-0886-08	249	225	24	200	9.638554e-02	1	exome+100bp flanks	34834024	24	190	6.889816e-07	5.454437e-06
TCGA-AL-3466-01A-01D-1252-08	30	30	0	23	0	1	exome+100bp flanks	34834024	4	22	1.148303e-07	6.315664e-07
TCGA-AL-3467-01A-01D-1252-08	14	14	0	13	0	1	exome+100bp flanks	34834024	0	12	0	3.444908e-07
TCGA-AL-3468-01A-01D-1252-08	87	84	3	67	3.448276e-02	1	exome+100bp flanks	34834024	16	61	4.593210e-07	1.751161e-06
TCGA-AL-3472-01A-01D-1252-08	54	53	1	44	1.851852e-02	0	coding only	34834024	9	44	2.583681e-07	1.263133e-06
TCGA-AL-3473-01A-01D-1252-08	43	42	1	35	2.325581e-02	1	exome+100bp flanks	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-AL-7173-01A-11D-2136-08	65	63	2	53	3.076923e-02	1	exome+100bp flanks	34834024	7	53	2.009530e-07	1.521501e-06
TCGA-AL-A5DJ-01A-11D-A26P-10	38	38	0	26	0	1	exome+100bp flanks	34834024	11	22	3.157832e-07	6.315664e-07
TCGA-AS-3777-01A-01D-0966-08	46	41	5	34	1.086957e-01	1	exome+100bp flanks	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-AS-3777-01A-01W-0886-08	251	228	23	196	9.163347e-02	1	exome+100bp flanks	34834024	28	188	8.038118e-07	5.397022e-06
TCGA-AS-3778-01A-01W-0886-08	435	396	39	370	8.965517e-02	1	exome+100bp flanks	34834024	25	353	7.176891e-07	1.013377e-05
TCGA-AT-A5NU-01A-11D-A28G-10	77	76	1	61	1.298701e-02	0	coding only	34834024	11	54	3.157832e-07	1.550208e-06
TCGA-B0-4690-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4691-01A-01D-1361-10	109	107	2	79	1.834862e-02	0	coding only	34834024	25	77	7.176891e-07	2.210482e-06
TCGA-B0-4693-01A-01D-1361-10	101	100	1	75	9.900990e-03	0	coding only	34834024	25	71	7.176891e-07	2.038237e-06
TCGA-B0-4694-01A-01D-1361-10	77	76	1	50	1.298701e-02	0	coding only	34834024	24	46	6.889816e-07	1.320548e-06
TCGA-B0-4697-01A-01D-1361-10	42	41	1	21	2.380952e-02	1	exome+100bp flanks	34834024	20	20	5.741513e-07	5.741513e-07
TCGA-B0-4700-01A-02D-1534-10	30	25	5	20	1.666667e-01	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-B0-4703-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4706-01A-01D-1501-10	55	49	6	39	1.090909e-01	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-B0-4707-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4710-01A-01D-1501-10	88	85	3	71	3.409091e-02	1	exome+100bp flanks	34834024	14	69	4.019059e-07	1.980822e-06
TCGA-B0-4710-01A-01W-1528-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-B0-4712-01A-01D-1501-10	107	103	4	82	3.738318e-02	1	exome+100bp flanks	34834024	17	78	4.880286e-07	2.239190e-06
TCGA-B0-4713-01A-01D-1361-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4714-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4718-01A-01D-1361-10	74	70	4	53	5.405405e-02	1	exome+100bp flanks	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-B0-4810-01A-01D-1501-10	64	63	1	56	1.562500e-02	0	coding only	34834024	5	51	1.435378e-07	1.464086e-06
TCGA-B0-4811-01A-01D-1501-10	122	120	2	90	1.639344e-02	0	coding only	34834024	27	81	7.751042e-07	2.325313e-06
TCGA-B0-4813-01A-01D-1361-10	58	58	0	42	0	0	coding only	34834024	15	40	4.306135e-07	1.148303e-06
TCGA-B0-4814-01A-01D-1361-10	68	65	3	47	4.411765e-02	1	exome+100bp flanks	34834024	17	45	4.880286e-07	1.291840e-06
TCGA-B0-4815-01A-01D-1501-10	76	72	4	53	5.263158e-02	1	exome+100bp flanks	34834024	18	49	5.167362e-07	1.406671e-06
TCGA-B0-4816-01A-01D-1501-10	59	57	2	50	3.389831e-02	1	exome+100bp flanks	34834024	7	49	2.009530e-07	1.406671e-06
TCGA-B0-4816-01A-01W-1528-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4817-01A-01D-1361-10	59	57	2	39	3.389831e-02	1	exome+100bp flanks	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-B0-4818-01A-01D-1501-10	79	73	6	58	7.594937e-02	1	exome+100bp flanks	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-B0-4819-01A-01D-1361-10	45	45	0	33	0	1	exome+100bp flanks	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-B0-4822-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4823-01A-02D-1421-08	121	116	5	89	4.132231e-02	1	exome+100bp flanks	34834024	24	86	6.889816e-07	2.468851e-06
TCGA-B0-4824-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4827-01A-02D-1421-08	93	89	4	71	4.301075e-02	1	exome+100bp flanks	34834024	18	65	5.167362e-07	1.865992e-06
TCGA-B0-4828-01A-01D-1361-10	104	100	4	77	3.846154e-02	1	exome+100bp flanks	34834024	21	71	6.028589e-07	2.038237e-06
TCGA-B0-4833-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4836-01A-01D-1373-10	27	27	0	18	0	1	exome+100bp flanks	34834024	8	16	2.296605e-07	4.593210e-07
TCGA-B0-4837-01A-01D-1373-10	47	46	1	36	2.127660e-02	1	exome+100bp flanks	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-B0-4838-01A-01D-1373-10	47	47	0	39	0	1	exome+100bp flanks	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-B0-4839-01A-01D-1373-10	67	63	4	45	5.970149e-02	1	exome+100bp flanks	34834024	17	41	4.880286e-07	1.177010e-06
TCGA-B0-4841-01A-01D-1361-10	104	99	5	66	4.807692e-02	1	exome+100bp flanks	34834024	30	65	8.612269e-07	1.865992e-06
TCGA-B0-4842-01A-02D-1421-08	58	58	0	49	0	0	coding only	34834024	8	48	2.296605e-07	1.377963e-06
TCGA-B0-4843-01A-01D-1361-10	76	75	1	55	1.315789e-02	0	coding only	34834024	18	52	5.167362e-07	1.492793e-06
TCGA-B0-4844-01A-01D-1361-10	51	48	3	35	5.882353e-02	1	exome+100bp flanks	34834024	12	33	3.444908e-07	9.473496e-07
TCGA-B0-4845-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-4846-01A-01D-1361-10	46	46	0	29	0	1	exome+100bp flanks	34834024	14	27	4.019059e-07	7.751042e-07
TCGA-B0-4847-01A-01D-1361-10	46	45	1	38	2.173913e-02	1	exome+100bp flanks	34834024	7	38	2.009530e-07	1.090887e-06
TCGA-B0-4848-01A-01W-1359-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	0	0	0
TCGA-B0-4849-01A-01D-1361-10	25	25	0	18	0	1	exome+100bp flanks	34834024	6	17	1.722454e-07	4.880286e-07
TCGA-B0-4852-01A-01D-1501-10	85	77	8	61	9.411765e-02	1	exome+100bp flanks	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-B0-4945-01A-01D-1421-08	42	42	0	39	0	1	exome+100bp flanks	34834024	2	36	5.741513e-08	1.033472e-06
TCGA-B0-5075-01A-01D-1392-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5075-01A-01D-1462-08	101	96	5	77	4.950495e-02	1	exome+100bp flanks	34834024	19	72	5.454437e-07	2.066945e-06
TCGA-B0-5077-01A-01D-1462-08	60	59	1	47	1.666667e-02	0	coding only	34834024	12	47	3.444908e-07	1.349256e-06
TCGA-B0-5080-01A-01D-1501-10	66	61	5	48	7.575758e-02	1	exome+100bp flanks	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-B0-5081-01A-01D-1462-08	47	46	1	34	2.127660e-02	1	exome+100bp flanks	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-B0-5083-01A-02D-1421-08	68	61	7	48	1.029412e-01	1	exome+100bp flanks	34834024	13	46	3.731983e-07	1.320548e-06
TCGA-B0-5084-01A-01D-1462-08	63	58	5	47	7.936508e-02	1	exome+100bp flanks	34834024	11	46	3.157832e-07	1.320548e-06
TCGA-B0-5085-01A-01D-1462-08	78	75	3	61	3.846154e-02	1	exome+100bp flanks	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-B0-5088-01A-01D-1462-08	70	66	4	48	5.714286e-02	1	exome+100bp flanks	34834024	17	44	4.880286e-07	1.263133e-06
TCGA-B0-5092-01A-01D-1421-08	71	70	1	55	1.408451e-02	0	coding only	34834024	13	54	3.731983e-07	1.550208e-06
TCGA-B0-5094-01A-01D-1421-08	86	82	4	69	4.651163e-02	1	exome+100bp flanks	34834024	12	66	3.444908e-07	1.894699e-06
TCGA-B0-5095-01A-01D-1421-08	84	81	3	66	3.571429e-02	1	exome+100bp flanks	34834024	15	60	4.306135e-07	1.722454e-06
TCGA-B0-5096-01A-01D-1421-08	102	97	5	67	4.901961e-02	1	exome+100bp flanks	34834024	29	66	8.325194e-07	1.894699e-06
TCGA-B0-5097-01A-01D-1421-08	66	60	6	49	9.090909e-02	1	exome+100bp flanks	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-B0-5098-01A-01D-1421-08	841	801	40	620	4.756243e-02	1	exome+100bp flanks	34834024	174	593	4.995116e-06	1.702359e-05
TCGA-B0-5099-01A-01D-1421-08	77	69	8	62	1.038961e-01	1	exome+100bp flanks	34834024	7	58	2.009530e-07	1.665039e-06
TCGA-B0-5100-01A-01D-1421-08	36	35	1	27	2.777778e-02	1	exome+100bp flanks	34834024	8	25	2.296605e-07	7.176891e-07
TCGA-B0-5102-01A-01D-1421-08	52	52	0	44	0	0	coding only	34834024	8	43	2.296605e-07	1.234425e-06
TCGA-B0-5104-01A-01D-1421-08	68	65	3	47	4.411765e-02	1	exome+100bp flanks	34834024	18	47	5.167362e-07	1.349256e-06
TCGA-B0-5104-01A-01W-1475-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5106-01A-01D-1421-08	92	90	2	71	2.173913e-02	0	coding only	34834024	16	67	4.593210e-07	1.923407e-06
TCGA-B0-5107-01A-01D-1421-08	62	61	1	52	1.612903e-02	0	coding only	34834024	8	50	2.296605e-07	1.435378e-06
TCGA-B0-5107-01A-01W-1475-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5108-01A-01D-1421-08	57	53	4	41	7.017544e-02	1	exome+100bp flanks	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-B0-5109-01A-02D-1421-08	56	50	6	41	1.071429e-01	1	exome+100bp flanks	34834024	9	41	2.583681e-07	1.177010e-06
TCGA-B0-5110-01A-01D-1421-08	74	71	3	56	4.054054e-02	1	exome+100bp flanks	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-B0-5110-01A-01W-1475-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5113-01A-01D-1421-08	41	36	5	28	1.219512e-01	1	exome+100bp flanks	34834024	6	27	1.722454e-07	7.751042e-07
TCGA-B0-5115-01A-01D-1421-08	61	59	2	52	3.278689e-02	1	exome+100bp flanks	34834024	7	49	2.009530e-07	1.406671e-06
TCGA-B0-5116-01A-02D-1421-08	64	63	1	49	1.562500e-02	0	coding only	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-B0-5116-01A-02W-1475-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5117-01A-01D-1421-08	49	42	7	28	1.428571e-01	1	exome+100bp flanks	34834024	13	27	3.731983e-07	7.751042e-07
TCGA-B0-5119-01A-02D-1421-08	94	90	4	75	4.255319e-02	1	exome+100bp flanks	34834024	14	66	4.019059e-07	1.894699e-06
TCGA-B0-5120-01A-01D-1421-08	64	60	4	42	6.250000e-02	1	exome+100bp flanks	34834024	18	40	5.167362e-07	1.148303e-06
TCGA-B0-5121-01A-02D-1421-08	55	51	4	35	7.272727e-02	1	exome+100bp flanks	34834024	16	32	4.593210e-07	9.186421e-07
TCGA-B0-5399-01A-01D-1501-10	51	44	7	35	1.372549e-01	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-B0-5399-01A-01W-1528-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5400-01A-01D-1501-10	45	41	4	29	8.888889e-02	1	exome+100bp flanks	34834024	11	28	3.157832e-07	8.038118e-07
TCGA-B0-5402-01A-01D-1501-10	59	54	5	52	8.474576e-02	1	exome+100bp flanks	34834024	2	44	5.741513e-08	1.263133e-06
TCGA-B0-5691-01A-11D-1534-10	66	64	2	52	3.030303e-02	1	exome+100bp flanks	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-B0-5692-01A-11D-1534-10	80	74	6	55	7.500000e-02	1	exome+100bp flanks	34834024	19	48	5.454437e-07	1.377963e-06
TCGA-B0-5693-01A-11D-1534-10	45	42	3	35	6.666667e-02	1	exome+100bp flanks	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-B0-5694-01A-11D-1534-10	67	66	1	56	1.492537e-02	0	coding only	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-B0-5695-01A-11D-1534-10	71	65	6	54	8.450704e-02	1	exome+100bp flanks	34834024	11	52	3.157832e-07	1.492793e-06
TCGA-B0-5695-01A-11W-1584-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B0-5696-01A-11D-1534-10	68	65	3	51	4.411765e-02	1	exome+100bp flanks	34834024	13	47	3.731983e-07	1.349256e-06
TCGA-B0-5697-01A-11D-1534-10	76	67	9	51	1.184211e-01	1	exome+100bp flanks	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-B0-5698-01A-11D-1669-08	80	72	8	62	1.000000e-01	1	exome+100bp flanks	34834024	10	58	2.870756e-07	1.665039e-06
TCGA-B0-5699-01A-11D-1534-10	51	50	1	38	1.960784e-02	0	coding only	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-B0-5699-01A-11W-1584-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-B0-5701-01A-11D-1534-10	119	115	4	92	3.361345e-02	1	exome+100bp flanks	34834024	23	87	6.602740e-07	2.497558e-06
TCGA-B0-5702-01A-11D-1534-10	68	64	4	52	5.882353e-02	1	exome+100bp flanks	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-B0-5703-01A-11D-1534-10	89	80	9	66	1.011236e-01	1	exome+100bp flanks	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-B0-5705-01A-11D-1534-10	87	84	3	64	3.448276e-02	1	exome+100bp flanks	34834024	17	62	4.880286e-07	1.779869e-06
TCGA-B0-5706-01A-11D-1534-10	61	60	1	46	1.639344e-02	0	coding only	34834024	13	43	3.731983e-07	1.234425e-06
TCGA-B0-5707-01A-11D-1534-10	47	45	2	31	4.255319e-02	1	exome+100bp flanks	34834024	12	30	3.444908e-07	8.612269e-07
TCGA-B0-5709-01A-11D-1534-10	74	73	1	54	1.351351e-02	0	coding only	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-B0-5710-01A-11D-1669-08	41	40	1	31	2.439024e-02	1	exome+100bp flanks	34834024	9	29	2.583681e-07	8.325194e-07
TCGA-B0-5711-01A-11D-1669-08	34	32	2	29	5.882353e-02	1	exome+100bp flanks	34834024	2	25	5.741513e-08	7.176891e-07
TCGA-B0-5712-01A-11D-1669-08	124	114	10	91	8.064516e-02	1	exome+100bp flanks	34834024	22	86	6.315664e-07	2.468851e-06
TCGA-B0-5713-01A-11D-1669-08	110	104	6	85	5.454545e-02	1	exome+100bp flanks	34834024	18	78	5.167362e-07	2.239190e-06
TCGA-B0-5812-01A-11D-1669-08	44	42	2	33	4.545455e-02	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-B1-5398-01A-02D-1589-08	99	96	3	72	3.030303e-02	1	exome+100bp flanks	34834024	23	71	6.602740e-07	2.038237e-06
TCGA-B1-7332-01A-11D-2136-08	45	45	0	34	0	1	exome+100bp flanks	34834024	10	30	2.870756e-07	8.612269e-07
TCGA-B1-A47M-01A-11D-A25F-10	104	102	2	81	1.923077e-02	0	coding only	34834024	21	75	6.028589e-07	2.153067e-06
TCGA-B1-A47N-01A-11D-A25F-10	39	38	1	25	2.564103e-02	1	exome+100bp flanks	34834024	12	24	3.444908e-07	6.889816e-07
TCGA-B1-A47O-01A-11D-A25F-10	29	28	1	20	3.448276e-02	1	exome+100bp flanks	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-B1-A654-01A-11D-A31X-10	48	45	3	39	6.250000e-02	1	exome+100bp flanks	34834024	6	39	1.722454e-07	1.119595e-06
TCGA-B1-A655-01A-11D-A31Z-10	95	91	4	65	4.210526e-02	1	exome+100bp flanks	34834024	24	60	6.889816e-07	1.722454e-06
TCGA-B1-A656-01A-11D-A31X-10	100	99	1	80	1.000000e-02	0	coding only	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-B1-A657-01A-11D-A31X-10	85	83	2	66	2.352941e-02	0	coding only	34834024	15	59	4.306135e-07	1.693746e-06
TCGA-B2-3923-01A-01D-1458-08	25	22	3	18	1.200000e-01	1	exome+100bp flanks	34834024	4	18	1.148303e-07	5.167362e-07
TCGA-B2-3924-01A-01D-1458-08	22	21	1	16	4.545455e-02	1	exome+100bp flanks	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-B2-3924-01A-02D-1386-10	75	71	4	53	5.333333e-02	1	exome+100bp flanks	34834024	17	48	4.880286e-07	1.377963e-06
TCGA-B2-4098-01A-01D-1458-08	33	31	2	22	6.060606e-02	1	exome+100bp flanks	34834024	9	21	2.583681e-07	6.028589e-07
TCGA-B2-4098-01A-02D-1386-10	54	52	2	37	3.703704e-02	1	exome+100bp flanks	34834024	14	34	4.019059e-07	9.760572e-07
TCGA-B2-4099-01A-02D-1251-10	74	65	9	48	1.216216e-01	1	exome+100bp flanks	34834024	16	45	4.593210e-07	1.291840e-06
TCGA-B2-4099-01A-02D-1458-08	13	13	0	11	0	1	exome+100bp flanks	34834024	2	8	5.741513e-08	2.296605e-07
TCGA-B2-4101-01A-02D-1458-08	37	36	1	31	2.702703e-02	1	exome+100bp flanks	34834024	5	29	1.435378e-07	8.325194e-07
TCGA-B2-5633-01A-01D-1534-10	55	45	10	36	1.818182e-01	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-B2-5635-01A-01D-1534-10	66	61	5	45	7.575758e-02	1	exome+100bp flanks	34834024	13	42	3.731983e-07	1.205718e-06
TCGA-B2-5641-01A-01D-1534-10	76	73	3	54	3.947368e-02	1	exome+100bp flanks	34834024	17	51	4.880286e-07	1.464086e-06
TCGA-B3-3925-01A-01D-1458-08	56	54	2	42	3.571429e-02	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-B3-3926-01A-01D-1252-08	8	8	0	8	0	1	exome+100bp flanks	34834024	0	8	0	2.296605e-07
TCGA-B3-4103-01A-01D-1458-08	48	47	1	36	2.083333e-02	1	exome+100bp flanks	34834024	10	35	2.870756e-07	1.004765e-06
TCGA-B3-4104-01A-01D-1458-08	77	77	0	59	0	0	coding only	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-B3-8121-01A-21D-2396-08	28	28	0	24	0	1	exome+100bp flanks	34834024	4	24	1.148303e-07	6.889816e-07
TCGA-B3-A6W5-01A-12D-A33Q-10	37	36	1	28	2.702703e-02	1	exome+100bp flanks	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-B4-5377-01A-01D-1501-10	54	50	4	38	7.407407e-02	1	exome+100bp flanks	34834024	11	34	3.157832e-07	9.760572e-07
TCGA-B4-5832-01A-11D-1669-08	95	90	5	69	5.263158e-02	1	exome+100bp flanks	34834024	19	68	5.454437e-07	1.952114e-06
TCGA-B4-5834-01A-11D-1669-08	39	36	3	23	7.692308e-02	1	exome+100bp flanks	34834024	11	22	3.157832e-07	6.315664e-07
TCGA-B4-5835-01A-11D-1669-08	90	87	3	76	3.333333e-02	1	exome+100bp flanks	34834024	9	74	2.583681e-07	2.124360e-06
TCGA-B4-5836-01A-11D-1669-08	110	107	3	78	2.727273e-02	0	coding only	34834024	28	75	8.038118e-07	2.153067e-06
TCGA-B4-5838-01A-11D-1669-08	85	83	2	66	2.352941e-02	0	coding only	34834024	17	62	4.880286e-07	1.779869e-06
TCGA-B4-5843-01A-11D-1669-08	63	57	6	50	9.523810e-02	1	exome+100bp flanks	34834024	7	45	2.009530e-07	1.291840e-06
TCGA-B4-5844-01A-11D-1669-08	84	82	2	69	2.380952e-02	0	coding only	34834024	13	67	3.731983e-07	1.923407e-06
TCGA-B8-4143-01A-01D-1806-10	94	89	5	65	5.319149e-02	1	exome+100bp flanks	34834024	23	56	6.602740e-07	1.607624e-06
TCGA-B8-4146-01B-11D-1669-08	42	41	1	32	2.380952e-02	1	exome+100bp flanks	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-B8-4148-01A-02D-1386-10	43	38	5	34	1.162791e-01	1	exome+100bp flanks	34834024	4	33	1.148303e-07	9.473496e-07
TCGA-B8-4151-01A-01D-1806-10	63	59	4	50	6.349206e-02	1	exome+100bp flanks	34834024	8	46	2.296605e-07	1.320548e-06
TCGA-B8-4153-01B-11D-1669-08	71	66	5	53	7.042254e-02	1	exome+100bp flanks	34834024	13	52	3.731983e-07	1.492793e-06
TCGA-B8-4154-01A-01D-1251-10	62	54	8	43	1.290323e-01	1	exome+100bp flanks	34834024	8	40	2.296605e-07	1.148303e-06
TCGA-B8-4619-01A-02D-1553-08	26	23	3	22	1.153846e-01	1	exome+100bp flanks	34834024	1	20	2.870756e-08	5.741513e-07
TCGA-B8-4620-01A-01D-1553-08	23	21	2	18	8.695652e-02	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-B8-4620-01A-02D-1386-10	49	47	2	43	4.081633e-02	1	exome+100bp flanks	34834024	4	41	1.148303e-07	1.177010e-06
TCGA-B8-4621-01A-01D-1501-10	101	96	5	79	4.950495e-02	1	exome+100bp flanks	34834024	16	71	4.593210e-07	2.038237e-06
TCGA-B8-4621-01A-01D-2102-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B8-4622-01A-02D-1553-08	35	34	1	28	2.857143e-02	1	exome+100bp flanks	34834024	6	26	1.722454e-07	7.463967e-07
TCGA-B8-5158-01A-01D-1421-08	66	65	1	51	1.515152e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-B8-5159-01A-01D-1421-08	61	60	1	51	1.639344e-02	0	coding only	34834024	9	48	2.583681e-07	1.377963e-06
TCGA-B8-5162-01A-01D-1421-08	116	110	6	88	5.172414e-02	1	exome+100bp flanks	34834024	20	82	5.741513e-07	2.354020e-06
TCGA-B8-5163-01A-01D-1421-08	76	75	1	57	1.315789e-02	0	coding only	34834024	16	54	4.593210e-07	1.550208e-06
TCGA-B8-5164-01A-01D-1421-08	88	86	2	68	2.272727e-02	0	coding only	34834024	17	65	4.880286e-07	1.865992e-06
TCGA-B8-5164-01A-01D-2099-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B8-5165-01A-01D-1421-08	21	20	1	14	4.761905e-02	1	exome+100bp flanks	34834024	6	14	1.722454e-07	4.019059e-07
TCGA-B8-5545-01A-01D-1669-08	28	25	3	18	1.071429e-01	1	exome+100bp flanks	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-B8-5546-01A-01D-1534-10	17	15	2	13	1.176471e-01	1	exome+100bp flanks	34834024	2	13	5.741513e-08	3.731983e-07
TCGA-B8-5549-01A-01D-1534-10	77	71	6	53	7.792208e-02	1	exome+100bp flanks	34834024	18	48	5.167362e-07	1.377963e-06
TCGA-B8-5550-01A-01D-1534-10	93	90	3	69	3.225806e-02	1	exome+100bp flanks	34834024	19	62	5.454437e-07	1.779869e-06
TCGA-B8-5550-01A-01W-1584-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-B8-5551-01A-01D-1534-10	54	49	5	37	9.259259e-02	1	exome+100bp flanks	34834024	12	35	3.444908e-07	1.004765e-06
TCGA-B8-5552-01B-11D-1669-08	35	32	3	29	8.571429e-02	1	exome+100bp flanks	34834024	3	27	8.612269e-08	7.751042e-07
TCGA-B8-5553-01A-01D-1534-10	47	46	1	39	2.127660e-02	1	exome+100bp flanks	34834024	7	39	2.009530e-07	1.119595e-06
TCGA-B9-4113-01A-01D-1252-08	67	65	2	51	2.985075e-02	0	coding only	34834024	14	50	4.019059e-07	1.435378e-06
TCGA-B9-4114-01A-01D-1252-08	79	76	3	58	3.797468e-02	1	exome+100bp flanks	34834024	18	53	5.167362e-07	1.521501e-06
TCGA-B9-4115-01A-01D-1252-08	47	47	0	35	0	1	exome+100bp flanks	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-B9-4116-01A-01D-1252-08	76	74	2	58	2.631579e-02	0	coding only	34834024	15	55	4.306135e-07	1.578916e-06
TCGA-B9-4117-01A-01D-1252-08	63	62	1	50	1.587302e-02	0	coding only	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-B9-4617-01A-01D-1252-08	50	49	1	39	2.000000e-02	0	coding only	34834024	8	37	2.296605e-07	1.062180e-06
TCGA-B9-5155-01A-01D-1589-08	104	103	1	82	9.615385e-03	0	coding only	34834024	19	74	5.454437e-07	2.124360e-06
TCGA-B9-5156-01A-01D-1589-08	76	74	2	57	2.631579e-02	0	coding only	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-B9-7268-01A-11D-2136-08	56	55	1	37	1.785714e-02	0	coding only	34834024	16	37	4.593210e-07	1.062180e-06
TCGA-B9-A44B-01A-11D-A25F-10	130	129	1	106	7.692308e-03	0	coding only	34834024	22	98	6.315664e-07	2.813341e-06
TCGA-B9-A5W7-01A-11D-A31X-10	9	9	0	8	0	1	exome+100bp flanks	34834024	1	8	2.870756e-08	2.296605e-07
TCGA-B9-A5W8-01A-11D-A28G-10	48	46	2	29	4.166667e-02	1	exome+100bp flanks	34834024	17	28	4.880286e-07	8.038118e-07
TCGA-B9-A5W9-01A-11D-A28G-10	52	50	2	36	3.846154e-02	1	exome+100bp flanks	34834024	9	30	2.583681e-07	8.612269e-07
TCGA-B9-A69E-01A-11D-A31X-10	78	77	1	66	1.282051e-02	0	coding only	34834024	11	58	3.157832e-07	1.665039e-06
TCGA-B9-A8YH-01A-11D-A36X-10	105	105	0	80	0	0	coding only	34834024	22	77	6.315664e-07	2.210482e-06
TCGA-B9-A8YI-01A-21D-A36X-10	119	118	1	95	8.403361e-03	0	coding only	34834024	21	88	6.028589e-07	2.526266e-06
TCGA-BP-4158-01A-02D-1366-10	60	58	2	35	3.333333e-02	1	exome+100bp flanks	34834024	23	34	6.602740e-07	9.760572e-07
TCGA-BP-4159-01A-02D-1366-10	71	70	1	54	1.408451e-02	0	coding only	34834024	15	48	4.306135e-07	1.377963e-06
TCGA-BP-4160-01A-02D-1366-10	65	65	0	47	0	0	coding only	34834024	18	46	5.167362e-07	1.320548e-06
TCGA-BP-4161-01A-02D-1386-10	76	72	4	58	5.263158e-02	1	exome+100bp flanks	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-BP-4161-01A-02W-1382-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4162-01A-02D-1386-10	49	43	6	37	1.224490e-01	1	exome+100bp flanks	34834024	5	34	1.435378e-07	9.760572e-07
TCGA-BP-4162-01A-02W-1382-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-BP-4163-01A-02D-1386-10	58	55	3	42	5.172414e-02	1	exome+100bp flanks	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-BP-4163-01A-02W-1382-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4164-01A-02D-1386-10	63	57	6	43	9.523810e-02	1	exome+100bp flanks	34834024	14	40	4.019059e-07	1.148303e-06
TCGA-BP-4164-01A-02W-1382-10	4	4	0	4	0	1	exome+100bp flanks	34834024	0	4	0	1.148303e-07
TCGA-BP-4165-01A-02W-1362-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-BP-4166-01A-02W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4167-01A-02D-1386-10	66	61	5	42	7.575758e-02	1	exome+100bp flanks	34834024	16	39	4.593210e-07	1.119595e-06
TCGA-BP-4169-01A-02D-1366-10	49	49	0	38	0	1	exome+100bp flanks	34834024	11	33	3.157832e-07	9.473496e-07
TCGA-BP-4170-01A-02D-1366-10	53	53	0	40	0	0	coding only	34834024	12	36	3.444908e-07	1.033472e-06
TCGA-BP-4173-01A-02D-1366-10	16	15	1	7	6.250000e-02	1	exome+100bp flanks	34834024	8	7	2.296605e-07	2.009530e-07
TCGA-BP-4174-01A-02D-1366-10	42	41	1	30	2.380952e-02	1	exome+100bp flanks	34834024	11	28	3.157832e-07	8.038118e-07
TCGA-BP-4176-01A-02D-1366-10	97	97	0	77	0	0	coding only	34834024	16	68	4.593210e-07	1.952114e-06
TCGA-BP-4177-01A-02D-1421-08	25	22	3	15	1.200000e-01	1	exome+100bp flanks	34834024	7	13	2.009530e-07	3.731983e-07
TCGA-BP-4326-01A-01D-1366-10	63	60	3	49	4.761905e-02	1	exome+100bp flanks	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-BP-4329-01A-02D-1366-10	50	49	1	44	2.000000e-02	0	coding only	34834024	5	43	1.435378e-07	1.234425e-06
TCGA-BP-4330-01A-01D-1366-10	49	48	1	34	2.040816e-02	1	exome+100bp flanks	34834024	14	34	4.019059e-07	9.760572e-07
TCGA-BP-4331-01A-01D-1366-10	49	49	0	35	0	1	exome+100bp flanks	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-BP-4337-01A-01D-1366-10	40	39	1	29	2.500000e-02	1	exome+100bp flanks	34834024	10	27	2.870756e-07	7.751042e-07
TCGA-BP-4338-01A-01D-1806-10	64	61	3	48	4.687500e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-BP-4340-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4341-01A-01D-1366-10	52	51	1	40	1.923077e-02	0	coding only	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-BP-4342-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4343-01A-02D-1366-10	35	33	2	19	5.714286e-02	1	exome+100bp flanks	34834024	12	18	3.444908e-07	5.167362e-07
TCGA-BP-4345-01A-01D-1366-10	20	18	2	16	1.000000e-01	1	exome+100bp flanks	34834024	2	15	5.741513e-08	4.306135e-07
TCGA-BP-4346-01A-01D-1366-10	47	45	2	33	4.255319e-02	1	exome+100bp flanks	34834024	12	29	3.444908e-07	8.325194e-07
TCGA-BP-4347-01A-01D-1366-10	41	41	0	33	0	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-BP-4349-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4351-01A-01D-1366-10	66	66	0	49	0	0	coding only	34834024	17	46	4.880286e-07	1.320548e-06
TCGA-BP-4352-01A-01D-1366-10	95	94	1	81	1.052632e-02	0	coding only	34834024	12	77	3.444908e-07	2.210482e-06
TCGA-BP-4354-01A-02D-1366-10	31	31	0	21	0	1	exome+100bp flanks	34834024	10	21	2.870756e-07	6.028589e-07
TCGA-BP-4355-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4756-01A-01D-1366-10	49	49	0	36	0	1	exome+100bp flanks	34834024	11	31	3.157832e-07	8.899345e-07
TCGA-BP-4758-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4759-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4760-01A-02D-1421-08	44	40	4	25	9.090909e-02	1	exome+100bp flanks	34834024	14	25	4.019059e-07	7.176891e-07
TCGA-BP-4761-01A-01D-1366-10	86	86	0	63	0	0	coding only	34834024	22	60	6.315664e-07	1.722454e-06
TCGA-BP-4762-01A-02W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4763-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4765-01A-01W-1362-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4766-01A-01D-1366-10	44	44	0	34	0	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-BP-4768-01A-01D-1366-10	62	61	1	43	1.612903e-02	0	coding only	34834024	17	43	4.880286e-07	1.234425e-06
TCGA-BP-4770-01A-01D-1501-10	72	67	5	51	6.944444e-02	1	exome+100bp flanks	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-BP-4771-01A-01D-1366-10	28	28	0	19	0	1	exome+100bp flanks	34834024	8	17	2.296605e-07	4.880286e-07
TCGA-BP-4774-01A-01D-1366-10	50	50	0	34	0	0	coding only	34834024	15	32	4.306135e-07	9.186421e-07
TCGA-BP-4775-01A-01D-1366-10	50	49	1	36	2.000000e-02	0	coding only	34834024	11	33	3.157832e-07	9.473496e-07
TCGA-BP-4777-01A-01D-1366-10	14	14	0	12	0	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-BP-4781-01A-01D-1373-10	44	43	1	30	2.272727e-02	1	exome+100bp flanks	34834024	11	25	3.157832e-07	7.176891e-07
TCGA-BP-4782-01A-02D-1421-08	89	88	1	73	1.123596e-02	0	coding only	34834024	15	68	4.306135e-07	1.952114e-06
TCGA-BP-4782-01A-02D-2099-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4787-01A-01D-1373-10	53	52	1	38	1.886792e-02	0	coding only	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-BP-4789-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4790-01A-01D-1373-10	29	29	0	21	0	1	exome+100bp flanks	34834024	8	19	2.296605e-07	5.454437e-07
TCGA-BP-4795-01A-02D-1421-08	46	40	6	26	1.304348e-01	1	exome+100bp flanks	34834024	14	24	4.019059e-07	6.889816e-07
TCGA-BP-4797-01A-01D-1373-10	20	20	0	17	0	1	exome+100bp flanks	34834024	2	14	5.741513e-08	4.019059e-07
TCGA-BP-4798-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4799-01A-01D-1373-10	23	23	0	16	0	1	exome+100bp flanks	34834024	7	14	2.009530e-07	4.019059e-07
TCGA-BP-4801-01A-02D-1421-08	68	64	4	52	5.882353e-02	1	exome+100bp flanks	34834024	11	51	3.157832e-07	1.464086e-06
TCGA-BP-4803-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4804-01A-02D-1373-10	22	21	1	18	4.545455e-02	1	exome+100bp flanks	34834024	3	18	8.612269e-08	5.167362e-07
TCGA-BP-4807-01A-01D-1373-10	58	55	3	42	5.172414e-02	1	exome+100bp flanks	34834024	11	42	3.157832e-07	1.205718e-06
TCGA-BP-4960-01A-01D-1462-08	77	72	5	58	6.493506e-02	1	exome+100bp flanks	34834024	14	55	4.019059e-07	1.578916e-06
TCGA-BP-4961-01A-01D-1392-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4961-01A-01D-1462-08	38	38	0	28	0	1	exome+100bp flanks	34834024	10	24	2.870756e-07	6.889816e-07
TCGA-BP-4962-01A-01D-1462-08	35	33	2	31	5.714286e-02	1	exome+100bp flanks	34834024	2	28	5.741513e-08	8.038118e-07
TCGA-BP-4963-01A-01D-1462-08	89	89	0	66	0	0	coding only	34834024	23	61	6.602740e-07	1.751161e-06
TCGA-BP-4964-01A-01D-1462-08	95	93	2	74	2.105263e-02	0	coding only	34834024	14	71	4.019059e-07	2.038237e-06
TCGA-BP-4965-01A-01D-1462-08	73	64	9	49	1.232877e-01	1	exome+100bp flanks	34834024	15	47	4.306135e-07	1.349256e-06
TCGA-BP-4967-01A-01D-1462-08	80	76	4	57	5.000000e-02	1	exome+100bp flanks	34834024	16	55	4.593210e-07	1.578916e-06
TCGA-BP-4968-01A-01D-1462-08	50	48	2	39	4.000000e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-BP-4970-01A-01D-1462-08	39	39	0	30	0	1	exome+100bp flanks	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-BP-4971-01A-01D-1462-08	50	49	1	33	2.000000e-02	0	coding only	34834024	15	30	4.306135e-07	8.612269e-07
TCGA-BP-4972-01A-01D-1462-08	46	45	1	33	2.173913e-02	1	exome+100bp flanks	34834024	12	32	3.444908e-07	9.186421e-07
TCGA-BP-4973-01A-01D-1462-08	37	34	3	29	8.108108e-02	1	exome+100bp flanks	34834024	5	29	1.435378e-07	8.325194e-07
TCGA-BP-4974-01A-01D-1392-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-4974-01A-01D-1462-08	26	26	0	22	0	1	exome+100bp flanks	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-BP-4975-01A-01D-1462-08	24	23	1	16	4.166667e-02	1	exome+100bp flanks	34834024	6	15	1.722454e-07	4.306135e-07
TCGA-BP-4976-01A-01D-1462-08	105	103	2	79	1.904762e-02	0	coding only	34834024	21	73	6.028589e-07	2.095652e-06
TCGA-BP-4977-01A-01D-1462-08	48	45	3	36	6.250000e-02	1	exome+100bp flanks	34834024	9	35	2.583681e-07	1.004765e-06
TCGA-BP-4981-01A-01D-1462-08	60	58	2	42	3.333333e-02	1	exome+100bp flanks	34834024	16	36	4.593210e-07	1.033472e-06
TCGA-BP-4982-01A-01D-1462-08	39	37	2	28	5.128205e-02	1	exome+100bp flanks	34834024	8	28	2.296605e-07	8.038118e-07
TCGA-BP-4983-01A-01D-1462-08	78	74	4	53	5.128205e-02	1	exome+100bp flanks	34834024	21	49	6.028589e-07	1.406671e-06
TCGA-BP-4985-01A-01D-1462-08	95	92	3	69	3.157895e-02	1	exome+100bp flanks	34834024	21	61	6.028589e-07	1.751161e-06
TCGA-BP-4986-01A-01D-1462-08	44	44	0	35	0	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-BP-4987-01A-01D-1462-08	25	25	0	18	0	1	exome+100bp flanks	34834024	7	18	2.009530e-07	5.167362e-07
TCGA-BP-4988-01A-01D-1462-08	45	44	1	34	2.222222e-02	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-BP-4989-01A-01D-1462-08	77	74	3	56	3.896104e-02	1	exome+100bp flanks	34834024	17	54	4.880286e-07	1.550208e-06
TCGA-BP-4991-01A-01D-1462-08	49	49	0	36	0	1	exome+100bp flanks	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-BP-4992-01A-01D-1392-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-BP-4992-01A-01D-1462-08	42	40	2	31	4.761905e-02	1	exome+100bp flanks	34834024	9	27	2.583681e-07	7.751042e-07
TCGA-BP-4993-01A-02D-1421-08	80	77	3	57	3.750000e-02	1	exome+100bp flanks	34834024	16	54	4.593210e-07	1.550208e-06
TCGA-BP-4994-01A-01D-1462-08	42	39	3	22	7.142857e-02	1	exome+100bp flanks	34834024	17	22	4.880286e-07	6.315664e-07
TCGA-BP-4995-01A-01D-1462-08	52	52	0	35	0	0	coding only	34834024	17	33	4.880286e-07	9.473496e-07
TCGA-BP-4998-01A-01D-1462-08	38	35	3	29	7.894737e-02	1	exome+100bp flanks	34834024	6	28	1.722454e-07	8.038118e-07
TCGA-BP-4999-01A-01D-1462-08	59	54	5	42	8.474576e-02	1	exome+100bp flanks	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-BP-5000-01A-01D-1462-08	45	43	2	30	4.444444e-02	1	exome+100bp flanks	34834024	12	28	3.444908e-07	8.038118e-07
TCGA-BP-5001-01A-01D-1392-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-5001-01A-01D-1462-08	39	39	0	28	0	1	exome+100bp flanks	34834024	11	27	3.157832e-07	7.751042e-07
TCGA-BP-5004-01A-01D-1462-08	51	48	3	41	5.882353e-02	1	exome+100bp flanks	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-BP-5006-01A-01D-1462-08	44	42	2	36	4.545455e-02	1	exome+100bp flanks	34834024	5	33	1.435378e-07	9.473496e-07
TCGA-BP-5007-01A-01D-1392-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-5007-01A-01D-1462-08	32	30	2	25	6.250000e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BP-5008-01A-01D-1392-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-5008-01A-01D-1462-08	36	36	0	29	0	1	exome+100bp flanks	34834024	7	26	2.009530e-07	7.463967e-07
TCGA-BP-5009-01A-01D-1462-08	50	48	2	40	4.000000e-02	1	exome+100bp flanks	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-BP-5010-01A-02D-1421-08	69	66	3	51	4.347826e-02	1	exome+100bp flanks	34834024	15	48	4.306135e-07	1.377963e-06
TCGA-BP-5168-01A-01D-1421-08	132	128	4	96	3.030303e-02	1	exome+100bp flanks	34834024	31	92	8.899345e-07	2.641096e-06
TCGA-BP-5169-01A-01D-1429-08	66	59	7	48	1.060606e-01	1	exome+100bp flanks	34834024	9	43	2.583681e-07	1.234425e-06
TCGA-BP-5170-01A-01D-1429-08	45	44	1	32	2.222222e-02	1	exome+100bp flanks	34834024	12	29	3.444908e-07	8.325194e-07
TCGA-BP-5173-01A-01D-1429-08	97	91	6	66	6.185567e-02	1	exome+100bp flanks	34834024	24	62	6.889816e-07	1.779869e-06
TCGA-BP-5174-01A-01D-1429-08	40	39	1	32	2.500000e-02	1	exome+100bp flanks	34834024	6	29	1.722454e-07	8.325194e-07
TCGA-BP-5175-01A-01D-1429-08	54	52	2	36	3.703704e-02	1	exome+100bp flanks	34834024	16	36	4.593210e-07	1.033472e-06
TCGA-BP-5176-01A-01D-1429-08	126	123	3	98	2.380952e-02	0	coding only	34834024	24	92	6.889816e-07	2.641096e-06
TCGA-BP-5177-01A-01D-1429-08	44	41	3	31	6.818182e-02	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-BP-5178-01A-01D-1429-08	65	62	3	46	4.615385e-02	1	exome+100bp flanks	34834024	15	44	4.306135e-07	1.263133e-06
TCGA-BP-5180-01A-01D-1429-08	41	40	1	35	2.439024e-02	1	exome+100bp flanks	34834024	5	33	1.435378e-07	9.473496e-07
TCGA-BP-5181-01A-01D-1429-08	81	75	6	59	7.407407e-02	1	exome+100bp flanks	34834024	14	51	4.019059e-07	1.464086e-06
TCGA-BP-5182-01A-01D-1429-08	66	64	2	49	3.030303e-02	1	exome+100bp flanks	34834024	15	45	4.306135e-07	1.291840e-06
TCGA-BP-5183-01A-01D-1429-08	58	55	3	42	5.172414e-02	1	exome+100bp flanks	34834024	13	40	3.731983e-07	1.148303e-06
TCGA-BP-5184-01A-01D-1429-08	32	31	1	21	3.125000e-02	1	exome+100bp flanks	34834024	9	21	2.583681e-07	6.028589e-07
TCGA-BP-5185-01A-01D-1429-08	85	82	3	69	3.529412e-02	1	exome+100bp flanks	34834024	13	68	3.731983e-07	1.952114e-06
TCGA-BP-5186-01A-01D-1429-08	35	34	1	29	2.857143e-02	1	exome+100bp flanks	34834024	5	28	1.435378e-07	8.038118e-07
TCGA-BP-5187-01A-01D-1429-08	70	67	3	51	4.285714e-02	1	exome+100bp flanks	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-BP-5187-01A-01W-1477-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-5189-01A-02D-1429-08	49	47	2	39	4.081633e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BP-5190-01A-01D-1429-08	45	44	1	36	2.222222e-02	1	exome+100bp flanks	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-BP-5191-01A-01D-1429-08	67	64	3	47	4.477612e-02	1	exome+100bp flanks	34834024	17	44	4.880286e-07	1.263133e-06
TCGA-BP-5192-01A-01D-1429-08	56	55	1	43	1.785714e-02	0	coding only	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-BP-5194-01A-02D-1429-08	27	27	0	16	0	1	exome+100bp flanks	34834024	11	16	3.157832e-07	4.593210e-07
TCGA-BP-5195-01A-02D-1429-08	61	59	2	48	3.278689e-02	1	exome+100bp flanks	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-BP-5196-01A-01D-1429-08	56	53	3	41	5.357143e-02	1	exome+100bp flanks	34834024	12	36	3.444908e-07	1.033472e-06
TCGA-BP-5198-01A-01D-1429-08	79	75	4	62	5.063291e-02	1	exome+100bp flanks	34834024	11	57	3.157832e-07	1.636331e-06
TCGA-BP-5199-01A-01D-1429-08	85	81	4	65	4.705882e-02	1	exome+100bp flanks	34834024	15	63	4.306135e-07	1.808577e-06
TCGA-BP-5200-01A-01D-1429-08	47	43	4	33	8.510638e-02	1	exome+100bp flanks	34834024	10	32	2.870756e-07	9.186421e-07
TCGA-BP-5200-01A-01D-2101-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-BP-5201-01A-01D-1429-08	40	37	3	32	7.500000e-02	1	exome+100bp flanks	34834024	4	31	1.148303e-07	8.899345e-07
TCGA-BP-5202-01A-02D-1429-08	44	40	4	34	9.090909e-02	1	exome+100bp flanks	34834024	6	33	1.722454e-07	9.473496e-07
TCGA-BQ-5875-01A-11D-1589-08	68	67	1	54	1.470588e-02	0	coding only	34834024	13	53	3.731983e-07	1.521501e-06
TCGA-BQ-5876-01A-11D-1589-08	61	60	1	46	1.639344e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-BQ-5877-01A-11D-1589-08	79	79	0	66	0	0	coding only	34834024	13	60	3.731983e-07	1.722454e-06
TCGA-BQ-5878-01A-11D-1589-08	93	91	2	69	2.150538e-02	0	coding only	34834024	22	64	6.315664e-07	1.837284e-06
TCGA-BQ-5879-01A-11D-1589-08	23	23	0	15	0	1	exome+100bp flanks	34834024	8	14	2.296605e-07	4.019059e-07
TCGA-BQ-5880-01A-11D-1589-08	41	40	1	32	2.439024e-02	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-BQ-5881-01A-11D-1589-08	33	32	1	27	3.030303e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BQ-5882-01A-11D-1589-08	60	60	0	45	0	0	coding only	34834024	14	41	4.019059e-07	1.177010e-06
TCGA-BQ-5883-01A-11D-1589-08	23	23	0	19	0	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-BQ-5884-01A-11D-1589-08	41	39	2	31	4.878049e-02	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-BQ-5885-01A-11D-1589-08	85	83	2	69	2.352941e-02	0	coding only	34834024	14	66	4.019059e-07	1.894699e-06
TCGA-BQ-5886-01A-11D-1589-08	57	56	1	49	1.754386e-02	0	coding only	34834024	6	46	1.722454e-07	1.320548e-06
TCGA-BQ-5887-01A-11D-1961-08	16	16	0	12	0	1	exome+100bp flanks	34834024	4	11	1.148303e-07	3.157832e-07
TCGA-BQ-5888-01A-11D-1589-08	23	22	1	17	4.347826e-02	1	exome+100bp flanks	34834024	5	14	1.435378e-07	4.019059e-07
TCGA-BQ-5889-01A-11D-1589-08	50	49	1	37	2.000000e-02	0	coding only	34834024	11	37	3.157832e-07	1.062180e-06
TCGA-BQ-5890-01A-11D-1589-08	76	73	3	58	3.947368e-02	1	exome+100bp flanks	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-BQ-5891-01A-11D-1589-08	28	25	3	13	1.071429e-01	1	exome+100bp flanks	34834024	11	12	3.157832e-07	3.444908e-07
TCGA-BQ-5892-01A-11D-1589-08	62	61	1	55	1.612903e-02	0	coding only	34834024	5	50	1.435378e-07	1.435378e-06
TCGA-BQ-5893-01A-11D-1589-08	47	47	0	34	0	1	exome+100bp flanks	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-BQ-5894-01A-11D-1589-08	20	20	0	17	0	1	exome+100bp flanks	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-BQ-7044-01A-11D-1961-08	63	62	1	51	1.587302e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-BQ-7045-01A-31D-1961-08	69	68	1	52	1.449275e-02	0	coding only	34834024	16	52	4.593210e-07	1.492793e-06
TCGA-BQ-7046-01A-11D-1961-08	27	27	0	23	0	1	exome+100bp flanks	34834024	4	20	1.148303e-07	5.741513e-07
TCGA-BQ-7048-01A-11D-1961-08	52	52	0	39	0	0	coding only	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-BQ-7049-01A-11D-1961-08	25	24	1	18	4.000000e-02	1	exome+100bp flanks	34834024	6	16	1.722454e-07	4.593210e-07
TCGA-BQ-7050-01A-11D-1961-08	23	23	0	18	0	1	exome+100bp flanks	34834024	5	18	1.435378e-07	5.167362e-07
TCGA-BQ-7051-01A-12D-1961-08	78	77	1	52	1.282051e-02	0	coding only	34834024	23	51	6.602740e-07	1.464086e-06
TCGA-BQ-7053-01A-11D-1961-08	43	40	3	30	6.976744e-02	1	exome+100bp flanks	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-BQ-7055-01A-11D-1961-08	6	6	0	5	0	1	exome+100bp flanks	34834024	1	5	2.870756e-08	1.435378e-07
TCGA-BQ-7056-01A-11D-1961-08	33	30	3	25	9.090909e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BQ-7058-01A-11D-1961-08	54	53	1	45	1.851852e-02	0	coding only	34834024	7	45	2.009530e-07	1.291840e-06
TCGA-BQ-7059-01A-11D-1961-08	63	62	1	48	1.587302e-02	0	coding only	34834024	14	47	4.019059e-07	1.349256e-06
TCGA-BQ-7060-01A-11D-1961-08	28	28	0	21	0	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-BQ-7061-01A-11D-1961-08	67	67	0	55	0	0	coding only	34834024	12	53	3.444908e-07	1.521501e-06
TCGA-BQ-7062-01A-11D-1961-08	38	38	0	31	0	1	exome+100bp flanks	34834024	7	28	2.009530e-07	8.038118e-07
TCGA-CJ-4634-01A-02D-1386-10	98	95	3	68	3.061224e-02	1	exome+100bp flanks	34834024	27	64	7.751042e-07	1.837284e-06
TCGA-CJ-4635-01A-02D-1373-10	59	58	1	42	1.694915e-02	0	coding only	34834024	14	41	4.019059e-07	1.177010e-06
TCGA-CJ-4636-01A-02D-1386-10	61	58	3	47	4.918033e-02	1	exome+100bp flanks	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-CJ-4636-01A-02W-1382-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-4637-01A-02D-1386-10	38	32	6	27	1.578947e-01	1	exome+100bp flanks	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-CJ-4638-01A-02D-1386-10	74	71	3	52	4.054054e-02	1	exome+100bp flanks	34834024	19	49	5.454437e-07	1.406671e-06
TCGA-CJ-4639-01A-02D-1386-10	67	62	5	55	7.462687e-02	1	exome+100bp flanks	34834024	7	51	2.009530e-07	1.464086e-06
TCGA-CJ-4640-01A-02D-1386-10	59	52	7	41	1.186441e-01	1	exome+100bp flanks	34834024	9	37	2.583681e-07	1.062180e-06
TCGA-CJ-4641-01A-02D-1386-10	52	49	3	36	5.769231e-02	1	exome+100bp flanks	34834024	12	33	3.444908e-07	9.473496e-07
TCGA-CJ-4643-01A-02D-1386-10	86	77	9	59	1.046512e-01	1	exome+100bp flanks	34834024	15	53	4.306135e-07	1.521501e-06
TCGA-CJ-4644-01A-02D-1386-10	93	82	11	62	1.182796e-01	1	exome+100bp flanks	34834024	19	58	5.454437e-07	1.665039e-06
TCGA-CJ-4868-01A-01D-1373-10	24	24	0	18	0	1	exome+100bp flanks	34834024	4	17	1.148303e-07	4.880286e-07
TCGA-CJ-4869-01A-02D-1429-08	93	86	7	74	7.526882e-02	1	exome+100bp flanks	34834024	10	70	2.870756e-07	2.009530e-06
TCGA-CJ-4870-01A-01D-1373-10	47	44	3	34	6.382979e-02	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-CJ-4871-01A-01D-1373-10	46	45	1	35	2.173913e-02	1	exome+100bp flanks	34834024	9	34	2.583681e-07	9.760572e-07
TCGA-CJ-4872-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-4873-01A-01D-1373-10	76	71	5	48	6.578947e-02	1	exome+100bp flanks	34834024	18	46	5.167362e-07	1.320548e-06
TCGA-CJ-4874-01A-01D-1373-10	62	62	0	41	0	0	coding only	34834024	21	36	6.028589e-07	1.033472e-06
TCGA-CJ-4875-01A-01D-1373-10	113	111	2	79	1.769912e-02	0	coding only	34834024	27	75	7.751042e-07	2.153067e-06
TCGA-CJ-4876-01A-01D-1373-10	44	44	0	38	0	1	exome+100bp flanks	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-CJ-4878-01A-01D-1373-10	35	35	0	27	0	1	exome+100bp flanks	34834024	8	24	2.296605e-07	6.889816e-07
TCGA-CJ-4881-01A-01D-1373-10	51	50	1	35	1.960784e-02	0	coding only	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-CJ-4882-01A-02D-1429-08	70	66	4	51	5.714286e-02	1	exome+100bp flanks	34834024	15	48	4.306135e-07	1.377963e-06
TCGA-CJ-4884-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-4885-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-4886-01A-01D-1373-10	23	22	1	18	4.347826e-02	1	exome+100bp flanks	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-CJ-4887-01A-01D-1373-10	41	41	0	34	0	1	exome+100bp flanks	34834024	6	32	1.722454e-07	9.186421e-07
TCGA-CJ-4888-01A-01D-1373-10	15	14	1	9	6.666667e-02	1	exome+100bp flanks	34834024	3	9	8.612269e-08	2.583681e-07
TCGA-CJ-4889-01A-01D-1373-10	21	21	0	18	0	1	exome+100bp flanks	34834024	3	17	8.612269e-08	4.880286e-07
TCGA-CJ-4890-01A-01D-1373-10	19	18	1	14	5.263158e-02	1	exome+100bp flanks	34834024	4	14	1.148303e-07	4.019059e-07
TCGA-CJ-4891-01A-01D-1373-10	13	13	0	7	0	1	exome+100bp flanks	34834024	5	6	1.435378e-07	1.722454e-07
TCGA-CJ-4892-01A-01W-1369-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-4893-01A-01D-1373-10	37	35	2	27	5.405405e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-CJ-4894-01A-01D-1373-10	70	69	1	51	1.428571e-02	0	coding only	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-CJ-4895-01A-01D-1373-10	46	46	0	35	0	1	exome+100bp flanks	34834024	10	33	2.870756e-07	9.473496e-07
TCGA-CJ-4897-01A-03D-1429-08	74	71	3	49	4.054054e-02	1	exome+100bp flanks	34834024	22	43	6.315664e-07	1.234425e-06
TCGA-CJ-4899-01A-01D-1462-08	37	33	4	25	1.081081e-01	1	exome+100bp flanks	34834024	7	23	2.009530e-07	6.602740e-07
TCGA-CJ-4900-01A-01D-1462-08	87	79	8	67	9.195402e-02	1	exome+100bp flanks	34834024	11	63	3.157832e-07	1.808577e-06
TCGA-CJ-4901-01A-01D-1429-08	56	54	2	47	3.571429e-02	1	exome+100bp flanks	34834024	7	44	2.009530e-07	1.263133e-06
TCGA-CJ-4902-01A-01D-1429-08	69	65	4	53	5.797101e-02	1	exome+100bp flanks	34834024	10	50	2.870756e-07	1.435378e-06
TCGA-CJ-4903-01A-01D-1429-08	56	54	2	43	3.571429e-02	1	exome+100bp flanks	34834024	11	42	3.157832e-07	1.205718e-06
TCGA-CJ-4904-01A-02D-1429-08	45	42	3	33	6.666667e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-CJ-4905-01A-02D-1429-08	67	64	3	45	4.477612e-02	1	exome+100bp flanks	34834024	18	42	5.167362e-07	1.205718e-06
TCGA-CJ-4907-01A-01D-1429-08	67	67	0	52	0	0	coding only	34834024	14	48	4.019059e-07	1.377963e-06
TCGA-CJ-4908-01A-01D-1429-08	33	31	2	24	6.060606e-02	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-CJ-4912-01A-01D-1429-08	90	88	2	65	2.222222e-02	0	coding only	34834024	21	62	6.028589e-07	1.779869e-06
TCGA-CJ-4913-01A-01D-1429-08	59	54	5	43	8.474576e-02	1	exome+100bp flanks	34834024	9	42	2.583681e-07	1.205718e-06
TCGA-CJ-4916-01A-01D-1429-08	48	48	0	37	0	1	exome+100bp flanks	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-CJ-4918-01A-01D-1429-08	87	81	6	65	6.896552e-02	1	exome+100bp flanks	34834024	13	59	3.731983e-07	1.693746e-06
TCGA-CJ-4920-01A-01D-1429-08	155	149	6	124	3.870968e-02	1	exome+100bp flanks	34834024	22	112	6.315664e-07	3.215247e-06
TCGA-CJ-4923-01A-01D-1429-08	51	50	1	37	1.960784e-02	0	coding only	34834024	13	34	3.731983e-07	9.760572e-07
TCGA-CJ-5671-01A-11D-1534-10	72	69	3	51	4.166667e-02	1	exome+100bp flanks	34834024	17	48	4.880286e-07	1.377963e-06
TCGA-CJ-5672-01A-11D-1534-10	98	96	2	76	2.040816e-02	0	coding only	34834024	20	73	5.741513e-07	2.095652e-06
TCGA-CJ-5675-01A-11D-1534-10	74	73	1	55	1.351351e-02	0	coding only	34834024	16	53	4.593210e-07	1.521501e-06
TCGA-CJ-5675-01A-11W-1584-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-5676-01A-11D-1534-10	70	68	2	49	2.857143e-02	0	coding only	34834024	18	43	5.167362e-07	1.234425e-06
TCGA-CJ-5677-01A-11D-1534-10	84	81	3	64	3.571429e-02	1	exome+100bp flanks	34834024	14	59	4.019059e-07	1.693746e-06
TCGA-CJ-5678-01A-11D-1534-10	58	49	9	40	1.551724e-01	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-CJ-5679-01A-11D-1534-10	108	101	7	84	6.481481e-02	1	exome+100bp flanks	34834024	16	76	4.593210e-07	2.181775e-06
TCGA-CJ-5679-01A-11W-1584-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CJ-5680-01A-11D-1534-10	57	53	4	38	7.017544e-02	1	exome+100bp flanks	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-CJ-5681-01A-11D-1534-10	36	33	3	27	8.333333e-02	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-CJ-5682-01A-11D-1534-10	84	78	6	62	7.142857e-02	1	exome+100bp flanks	34834024	15	54	4.306135e-07	1.550208e-06
TCGA-CJ-5683-01A-11D-1534-10	84	76	8	54	9.523810e-02	1	exome+100bp flanks	34834024	20	50	5.741513e-07	1.435378e-06
TCGA-CJ-5684-01A-11D-1534-10	57	51	6	40	1.052632e-01	1	exome+100bp flanks	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-CJ-5686-01A-11D-1669-08	72	69	3	54	4.166667e-02	1	exome+100bp flanks	34834024	15	51	4.306135e-07	1.464086e-06
TCGA-CJ-6027-01A-11D-1669-08	84	78	6	62	7.142857e-02	1	exome+100bp flanks	34834024	16	59	4.593210e-07	1.693746e-06
TCGA-CJ-6028-01A-11D-1669-08	58	56	2	45	3.448276e-02	1	exome+100bp flanks	34834024	10	43	2.870756e-07	1.234425e-06
TCGA-CJ-6030-01A-11D-1669-08	124	123	1	98	8.064516e-03	0	coding only	34834024	23	90	6.602740e-07	2.583681e-06
TCGA-CJ-6031-01A-11D-1669-08	62	60	2	47	3.225806e-02	1	exome+100bp flanks	34834024	11	42	3.157832e-07	1.205718e-06
TCGA-CJ-6032-01A-11D-1669-08	56	51	5	40	8.928571e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-CJ-6033-01A-11D-1669-08	86	81	5	61	5.813953e-02	1	exome+100bp flanks	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-CW-5580-01A-01D-1669-08	105	100	5	70	4.761905e-02	1	exome+100bp flanks	34834024	28	66	8.038118e-07	1.894699e-06
TCGA-CW-5581-01A-02D-1534-10	67	65	2	57	2.985075e-02	0	coding only	34834024	6	55	1.722454e-07	1.578916e-06
TCGA-CW-5581-01A-02W-1584-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CW-5583-01A-02D-1534-10	42	35	7	28	1.666667e-01	1	exome+100bp flanks	34834024	6	26	1.722454e-07	7.463967e-07
TCGA-CW-5585-01A-01D-1534-10	52	49	3	39	5.769231e-02	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-CW-5588-01A-01D-1534-10	73	68	5	52	6.849315e-02	1	exome+100bp flanks	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-CW-5589-01A-01D-1534-10	70	63	7	47	1.000000e-01	1	exome+100bp flanks	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-CW-5591-01A-01D-1534-10	56	46	10	37	1.785714e-01	1	exome+100bp flanks	34834024	9	35	2.583681e-07	1.004765e-06
TCGA-CW-6087-01A-11D-1669-08	62	58	4	43	6.451613e-02	1	exome+100bp flanks	34834024	14	42	4.019059e-07	1.205718e-06
TCGA-CW-6090-01A-11D-1669-08	122	118	4	82	3.278689e-02	1	exome+100bp flanks	34834024	35	75	1.004765e-06	2.153067e-06
TCGA-CW-6093-01A-11D-1669-08	125	121	4	94	3.200000e-02	1	exome+100bp flanks	34834024	24	87	6.889816e-07	2.497558e-06
TCGA-CW-6097-01A-11D-1669-08	37	33	4	27	1.081081e-01	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-CZ-4853-01A-01D-1429-08	116	113	3	85	2.586207e-02	0	coding only	34834024	27	77	7.751042e-07	2.210482e-06
TCGA-CZ-4854-01A-01D-1373-10	84	80	4	65	4.761905e-02	1	exome+100bp flanks	34834024	12	60	3.444908e-07	1.722454e-06
TCGA-CZ-4856-01A-02D-1429-08	58	58	0	48	0	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-CZ-4857-01A-01D-1373-10	96	91	5	75	5.208333e-02	1	exome+100bp flanks	34834024	16	70	4.593210e-07	2.009530e-06
TCGA-CZ-4858-01A-01W-1369-10	2	2	0	2	0	1	exome+100bp flanks	34834024	0	2	0	5.741513e-08
TCGA-CZ-4859-01A-02D-1429-08	116	109	7	88	6.034483e-02	1	exome+100bp flanks	34834024	18	84	5.167362e-07	2.411435e-06
TCGA-CZ-4861-01A-01D-1373-10	100	99	1	78	1.000000e-02	0	coding only	34834024	21	76	6.028589e-07	2.181775e-06
TCGA-CZ-4862-01A-01D-1373-10	78	77	1	50	1.282051e-02	0	coding only	34834024	23	48	6.602740e-07	1.377963e-06
TCGA-CZ-4863-01A-01D-1501-10	46	41	5	31	1.086957e-01	1	exome+100bp flanks	34834024	9	29	2.583681e-07	8.325194e-07
TCGA-CZ-4865-01A-02D-1501-10	75	73	2	62	2.666667e-02	0	coding only	34834024	9	58	2.583681e-07	1.665039e-06
TCGA-CZ-4866-01A-01D-1501-10	93	83	10	66	1.075269e-01	1	exome+100bp flanks	34834024	16	64	4.593210e-07	1.837284e-06
TCGA-CZ-5451-01A-01D-1501-10	88	80	8	67	9.090909e-02	1	exome+100bp flanks	34834024	13	65	3.731983e-07	1.865992e-06
TCGA-CZ-5452-01A-01D-1501-10	36	36	0	26	0	1	exome+100bp flanks	34834024	9	24	2.583681e-07	6.889816e-07
TCGA-CZ-5453-01A-01D-1501-10	99	88	11	68	1.111111e-01	1	exome+100bp flanks	34834024	18	64	5.167362e-07	1.837284e-06
TCGA-CZ-5454-01A-01D-1501-10	29	26	3	17	1.034483e-01	1	exome+100bp flanks	34834024	9	16	2.583681e-07	4.593210e-07
TCGA-CZ-5455-01A-01D-1501-10	32	31	1	22	3.125000e-02	1	exome+100bp flanks	34834024	9	20	2.583681e-07	5.741513e-07
TCGA-CZ-5455-01A-01W-1528-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CZ-5456-01A-01D-1501-10	72	68	4	59	5.555556e-02	1	exome+100bp flanks	34834024	9	53	2.583681e-07	1.521501e-06
TCGA-CZ-5457-01A-01D-1501-10	86	85	1	71	1.162791e-02	0	coding only	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-CZ-5457-01A-01W-1528-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CZ-5458-01A-01D-1501-10	34	31	3	25	8.823529e-02	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-CZ-5459-01A-01D-1501-10	108	105	3	83	2.777778e-02	0	coding only	34834024	21	78	6.028589e-07	2.239190e-06
TCGA-CZ-5460-01A-01D-1501-10	66	59	7	46	1.060606e-01	1	exome+100bp flanks	34834024	11	44	3.157832e-07	1.263133e-06
TCGA-CZ-5461-01A-01D-1501-10	76	72	4	65	5.263158e-02	1	exome+100bp flanks	34834024	6	59	1.722454e-07	1.693746e-06
TCGA-CZ-5462-01A-01D-1501-10	72	69	3	56	4.166667e-02	1	exome+100bp flanks	34834024	11	52	3.157832e-07	1.492793e-06
TCGA-CZ-5463-01A-01D-1501-10	54	51	3	42	5.555556e-02	1	exome+100bp flanks	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-CZ-5465-01A-01D-1806-10	128	116	12	99	9.375000e-02	1	exome+100bp flanks	34834024	15	88	4.306135e-07	2.526266e-06
TCGA-CZ-5466-01A-01D-1501-10	71	70	1	56	1.408451e-02	0	coding only	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-CZ-5466-01A-01W-1528-10	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-CZ-5467-01A-01D-1501-10	65	64	1	47	1.538462e-02	0	coding only	34834024	17	41	4.880286e-07	1.177010e-06
TCGA-CZ-5468-01A-01D-1501-10	147	139	8	109	5.442177e-02	1	exome+100bp flanks	34834024	28	98	8.038118e-07	2.813341e-06
TCGA-CZ-5469-01A-01D-1501-10	56	50	6	41	1.071429e-01	1	exome+100bp flanks	34834024	9	40	2.583681e-07	1.148303e-06
TCGA-CZ-5470-01A-01D-1501-10	54	45	9	38	1.666667e-01	1	exome+100bp flanks	34834024	7	36	2.009530e-07	1.033472e-06
TCGA-CZ-5982-01A-11D-1669-08	50	50	0	38	0	0	coding only	34834024	11	36	3.157832e-07	1.033472e-06
TCGA-CZ-5984-01A-11D-1669-08	47	44	3	31	6.382979e-02	1	exome+100bp flanks	34834024	12	29	3.444908e-07	8.325194e-07
TCGA-CZ-5985-01A-11D-1669-08	63	58	5	45	7.936508e-02	1	exome+100bp flanks	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-CZ-5986-01A-11D-1669-08	62	58	4	46	6.451613e-02	1	exome+100bp flanks	34834024	12	43	3.444908e-07	1.234425e-06
TCGA-CZ-5987-01A-11D-1669-08	57	57	0	45	0	0	coding only	34834024	11	42	3.157832e-07	1.205718e-06
TCGA-CZ-5988-01A-11D-1669-08	49	48	1	31	2.040816e-02	1	exome+100bp flanks	34834024	16	29	4.593210e-07	8.325194e-07
TCGA-CZ-5989-01A-11D-1669-08	42	41	1	30	2.380952e-02	1	exome+100bp flanks	34834024	11	30	3.157832e-07	8.612269e-07
TCGA-DV-5565-01A-01D-1534-10	53	53	0	45	0	0	coding only	34834024	7	40	2.009530e-07	1.148303e-06
TCGA-DV-5566-01A-01D-1534-10	40	40	0	27	0	1	exome+100bp flanks	34834024	13	25	3.731983e-07	7.176891e-07
TCGA-DV-5568-01A-01D-1534-10	13	13	0	11	0	1	exome+100bp flanks	34834024	2	11	5.741513e-08	3.157832e-07
TCGA-DV-5569-01A-01D-1534-10	24	21	3	17	1.250000e-01	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-DV-5574-01A-01D-1534-10	27	24	3	19	1.111111e-01	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-DV-5575-01A-01D-1534-10	38	36	2	29	5.263158e-02	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-DV-5576-01A-01D-1534-10	29	26	3	21	1.034483e-01	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-DW-5560-01A-01D-1589-08	27	27	0	22	0	1	exome+100bp flanks	34834024	5	20	1.435378e-07	5.741513e-07
TCGA-DW-5561-01A-01D-1589-08	41	41	0	31	0	1	exome+100bp flanks	34834024	10	29	2.870756e-07	8.325194e-07
TCGA-DW-7834-01A-11D-2136-08	52	50	2	38	3.846154e-02	1	exome+100bp flanks	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-DW-7836-01A-11D-2136-08	42	41	1	32	2.380952e-02	1	exome+100bp flanks	34834024	9	31	2.583681e-07	8.899345e-07
TCGA-DW-7837-01A-11D-2136-08	39	39	0	32	0	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-DW-7838-01A-11D-2136-08	78	78	0	57	0	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-DW-7839-01A-11D-2136-08	44	44	0	39	0	1	exome+100bp flanks	34834024	5	37	1.435378e-07	1.062180e-06
TCGA-DW-7840-01A-11D-2136-08	85	84	1	70	1.176471e-02	0	coding only	34834024	14	62	4.019059e-07	1.779869e-06
TCGA-DW-7841-01A-11D-2136-08	55	55	0	43	0	0	coding only	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-DW-7842-01A-11D-2136-08	27	27	0	24	0	1	exome+100bp flanks	34834024	3	22	8.612269e-08	6.315664e-07
TCGA-DW-7963-01B-11D-A28G-10	30	29	1	19	3.333333e-02	1	exome+100bp flanks	34834024	10	17	2.870756e-07	4.880286e-07
TCGA-DZ-6131-01A-11D-1961-08	30	30	0	21	0	1	exome+100bp flanks	34834024	8	20	2.296605e-07	5.741513e-07
TCGA-DZ-6132-01A-11D-1961-08	93	92	1	82	1.075269e-02	0	coding only	34834024	9	79	2.583681e-07	2.267898e-06
TCGA-DZ-6133-01A-11D-1961-08	86	86	0	60	0	0	coding only	34834024	25	56	7.176891e-07	1.607624e-06
TCGA-DZ-6134-01A-11D-1961-08	32	32	0	23	0	1	exome+100bp flanks	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-DZ-6135-01A-11D-1961-08	35	35	0	24	0	1	exome+100bp flanks	34834024	11	24	3.157832e-07	6.889816e-07
TCGA-EU-5904-01A-11D-1669-08	48	44	4	33	8.333333e-02	1	exome+100bp flanks	34834024	11	28	3.157832e-07	8.038118e-07
TCGA-EU-5905-01A-11D-1669-08	62	60	2	52	3.225806e-02	1	exome+100bp flanks	34834024	7	52	2.009530e-07	1.492793e-06
TCGA-EU-5906-01A-11D-1669-08	67	67	0	52	0	0	coding only	34834024	14	50	4.019059e-07	1.435378e-06
TCGA-EU-5907-01A-11D-1669-08	52	51	1	42	1.923077e-02	0	coding only	34834024	7	42	2.009530e-07	1.205718e-06
TCGA-EV-5901-01A-11D-1589-08	41	40	1	34	2.439024e-02	1	exome+100bp flanks	34834024	6	30	1.722454e-07	8.612269e-07
TCGA-EV-5902-01A-11D-1589-08	80	79	1	66	1.250000e-02	0	coding only	34834024	11	60	3.157832e-07	1.722454e-06
TCGA-EV-5903-01A-11D-1589-08	97	95	2	78	2.061856e-02	0	coding only	34834024	14	68	4.019059e-07	1.952114e-06
TCGA-F9-A4JJ-01A-11D-A25F-10	37	37	0	27	0	1	exome+100bp flanks	34834024	9	25	2.583681e-07	7.176891e-07
TCGA-F9-A7Q0-01A-11D-A35Z-10	18	16	2	11	1.111111e-01	1	exome+100bp flanks	34834024	5	9	1.435378e-07	2.583681e-07
TCGA-F9-A7VF-01A-11D-A33Q-10	77	76	1	57	1.298701e-02	0	coding only	34834024	19	51	5.454437e-07	1.464086e-06
TCGA-F9-A8NY-01A-11D-A35Z-10	47	46	1	33	2.127660e-02	1	exome+100bp flanks	34834024	12	31	3.444908e-07	8.899345e-07
TCGA-F9-A97G-01A-11D-A382-10	72	72	0	59	0	0	coding only	34834024	12	52	3.444908e-07	1.492793e-06
TCGA-G7-6789-01A-11D-1961-08	19	19	0	13	0	1	exome+100bp flanks	34834024	6	11	1.722454e-07	3.157832e-07
TCGA-G7-6790-01A-11D-1961-08	57	54	3	41	5.263158e-02	1	exome+100bp flanks	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-G7-6792-01A-21D-1961-08	23	23	0	14	0	1	exome+100bp flanks	34834024	9	13	2.583681e-07	3.731983e-07
TCGA-G7-6793-01A-11D-1961-08	36	35	1	27	2.777778e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-G7-6795-01A-11D-1961-08	74	73	1	52	1.351351e-02	0	coding only	34834024	20	50	5.741513e-07	1.435378e-06
TCGA-G7-6796-01A-11D-1961-08	55	54	1	42	1.818182e-02	0	coding only	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-G7-6797-01A-11D-1961-08	76	76	0	52	0	0	coding only	34834024	23	49	6.602740e-07	1.406671e-06
TCGA-G7-7501-01A-11D-2201-08	39	39	0	30	0	1	exome+100bp flanks	34834024	7	27	2.009530e-07	7.751042e-07
TCGA-G7-7502-01A-11D-2201-08	65	64	1	49	1.538462e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-G7-A4TM-01A-11D-A31X-10	38	37	1	25	2.631579e-02	1	exome+100bp flanks	34834024	12	22	3.444908e-07	6.315664e-07
TCGA-G7-A8LB-01A-11D-A35Z-10	108	108	0	91	0	0	coding only	34834024	17	84	4.880286e-07	2.411435e-06
TCGA-G7-A8LC-01A-11D-A35Z-10	13	13	0	10	0	1	exome+100bp flanks	34834024	2	9	5.741513e-08	2.583681e-07
TCGA-G7-A8LD-01A-11D-A35Z-10	51	50	1	41	1.960784e-02	0	coding only	34834024	8	37	2.296605e-07	1.062180e-06
TCGA-G7-A8LE-01A-11D-A35Z-10	78	76	2	61	2.564103e-02	0	coding only	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-GL-6846-01A-11D-1961-08	64	63	1	47	1.562500e-02	0	coding only	34834024	14	45	4.019059e-07	1.291840e-06
TCGA-GL-7773-01A-11D-2136-08	114	112	2	88	1.754386e-02	0	coding only	34834024	21	84	6.028589e-07	2.411435e-06
TCGA-GL-7966-01A-11D-2201-08	35	35	0	24	0	1	exome+100bp flanks	34834024	11	21	3.157832e-07	6.028589e-07
TCGA-GL-8500-01A-11D-2396-08	80	75	5	64	6.250000e-02	1	exome+100bp flanks	34834024	11	58	3.157832e-07	1.665039e-06
TCGA-GL-A4EM-01A-11D-A25F-10	66	66	0	53	0	0	coding only	34834024	11	47	3.157832e-07	1.349256e-06
TCGA-GL-A59R-01A-11D-A26P-10	81	80	1	65	1.234568e-02	0	coding only	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-GL-A59T-01A-21D-A28G-10	77	75	2	55	2.597403e-02	0	coding only	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-GL-A9DC-01A-11D-A36X-10	118	114	4	90	3.389831e-02	1	exome+100bp flanks	34834024	23	84	6.602740e-07	2.411435e-06
TCGA-GL-A9DD-01A-11D-A36X-10	111	110	1	86	9.009009e-03	0	coding only	34834024	19	78	5.454437e-07	2.239190e-06
TCGA-GL-A9DE-01A-11D-A36X-10	116	115	1	85	8.620690e-03	0	coding only	34834024	26	82	7.463967e-07	2.354020e-06
TCGA-HE-7128-01A-11D-1961-08	40	39	1	35	2.500000e-02	1	exome+100bp flanks	34834024	3	31	8.612269e-08	8.899345e-07
TCGA-HE-7129-01A-11D-1961-08	49	48	1	32	2.040816e-02	1	exome+100bp flanks	34834024	16	28	4.593210e-07	8.038118e-07
TCGA-HE-7130-01A-11D-1961-08	141	140	1	116	7.092199e-03	0	coding only	34834024	23	113	6.602740e-07	3.243955e-06
TCGA-HE-A5NF-01A-11D-A26P-10	69	69	0	58	0	0	coding only	34834024	11	56	3.157832e-07	1.607624e-06
TCGA-HE-A5NH-01A-11D-A26P-10	82	80	2	67	2.439024e-02	0	coding only	34834024	13	57	3.731983e-07	1.636331e-06
TCGA-HE-A5NI-01A-11D-A26P-10	105	105	0	79	0	0	coding only	34834024	25	74	7.176891e-07	2.124360e-06
TCGA-HE-A5NJ-01A-11D-A26P-10	74	73	1	56	1.351351e-02	0	coding only	34834024	16	52	4.593210e-07	1.492793e-06
TCGA-HE-A5NK-01A-11D-A26P-10	85	83	2	61	2.352941e-02	0	coding only	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-HE-A5NL-01A-11D-A26P-10	73	72	1	54	1.369863e-02	0	coding only	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-IA-A40U-01A-11D-A25F-10	49	45	4	38	8.163265e-02	1	exome+100bp flanks	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-IA-A40X-01A-11D-A25F-10	30	27	3	23	1.000000e-01	1	exome+100bp flanks	34834024	4	21	1.148303e-07	6.028589e-07
TCGA-IA-A40Y-01A-11D-A25F-10	78	78	0	62	0	0	coding only	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-IA-A83S-01A-11D-A34Z-10	134	131	3	105	2.238806e-02	0	coding only	34834024	22	101	6.315664e-07	2.899464e-06
TCGA-IA-A83T-01A-11D-A34Z-10	65	63	2	48	3.076923e-02	1	exome+100bp flanks	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-IA-A83V-01A-11D-A34Z-10	52	47	5	33	9.615385e-02	1	exome+100bp flanks	34834024	14	31	4.019059e-07	8.899345e-07
TCGA-IA-A83W-01A-11D-A34Z-10	53	53	0	41	0	0	coding only	34834024	12	39	3.444908e-07	1.119595e-06
TCGA-IZ-8195-01A-31D-2396-08	73	72	1	56	1.369863e-02	0	coding only	34834024	14	51	4.019059e-07	1.464086e-06
TCGA-IZ-8196-01A-11D-2396-08	94	94	0	71	0	0	coding only	34834024	21	67	6.028589e-07	1.923407e-06
TCGA-IZ-A6M8-01A-11D-A31X-10	59	58	1	43	1.694915e-02	0	coding only	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-IZ-A6M9-01A-11D-A31X-10	59	57	2	46	3.389831e-02	1	exome+100bp flanks	34834024	10	41	2.870756e-07	1.177010e-06
TCGA-J7-6720-01A-11D-2136-08	45	45	0	36	0	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-J7-8537-01A-11D-2396-08	44	43	1	35	2.272727e-02	1	exome+100bp flanks	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-J7-A8I2-01A-12D-A35Z-10	61	60	1	49	1.639344e-02	0	coding only	34834024	10	46	2.870756e-07	1.320548e-06
TCGA-KL-8323-01A-21D-2310-10	73	68	5	50	6.849315e-02	1	exome+100bp flanks	34834024	17	43	4.880286e-07	1.234425e-06
TCGA-KL-8324-01A-11D-2310-10	113	109	4	77	3.539823e-02	1	exome+100bp flanks	34834024	31	71	8.899345e-07	2.038237e-06
TCGA-KL-8325-01A-11D-2310-10	79	78	1	63	1.265823e-02	0	coding only	34834024	14	56	4.019059e-07	1.607624e-06
TCGA-KL-8326-01A-11D-2310-10	79	75	4	55	5.063291e-02	1	exome+100bp flanks	34834024	17	46	4.880286e-07	1.320548e-06
TCGA-KL-8327-01A-11D-2310-10	55	53	2	45	3.636364e-02	1	exome+100bp flanks	34834024	8	41	2.296605e-07	1.177010e-06
TCGA-KL-8328-01A-11D-2310-10	95	88	7	61	7.368421e-02	1	exome+100bp flanks	34834024	24	55	6.889816e-07	1.578916e-06
TCGA-KL-8329-01A-11D-2310-10	118	111	7	86	5.932203e-02	1	exome+100bp flanks	34834024	19	78	5.454437e-07	2.239190e-06
TCGA-KL-8330-01A-11D-2310-10	95	93	2	65	2.105263e-02	0	coding only	34834024	24	57	6.889816e-07	1.636331e-06
TCGA-KL-8331-01A-11D-2310-10	79	75	4	57	5.063291e-02	1	exome+100bp flanks	34834024	17	53	4.880286e-07	1.521501e-06
TCGA-KL-8332-01A-11D-2310-10	71	69	2	57	2.816901e-02	0	coding only	34834024	9	51	2.583681e-07	1.464086e-06
TCGA-KL-8333-01A-11D-2310-10	66	63	3	46	4.545455e-02	1	exome+100bp flanks	34834024	16	39	4.593210e-07	1.119595e-06
TCGA-KL-8334-01A-11D-2310-10	77	77	0	53	0	0	coding only	34834024	22	51	6.315664e-07	1.464086e-06
TCGA-KL-8335-01A-11D-2310-10	107	105	2	82	1.869159e-02	0	coding only	34834024	23	74	6.602740e-07	2.124360e-06
TCGA-KL-8336-01A-11D-2310-10	80	79	1	64	1.250000e-02	0	coding only	34834024	12	57	3.444908e-07	1.636331e-06
TCGA-KL-8337-01A-11D-2310-10	79	76	3	57	3.797468e-02	1	exome+100bp flanks	34834024	16	53	4.593210e-07	1.521501e-06
TCGA-KL-8338-01A-11D-2310-10	54	53	1	42	1.851852e-02	0	coding only	34834024	10	40	2.870756e-07	1.148303e-06
TCGA-KL-8339-01A-11D-2310-10	106	100	6	75	5.660377e-02	1	exome+100bp flanks	34834024	24	69	6.889816e-07	1.980822e-06
TCGA-KL-8340-01A-11D-2310-10	57	55	2	43	3.508772e-02	1	exome+100bp flanks	34834024	10	39	2.870756e-07	1.119595e-06
TCGA-KL-8341-01A-11D-2310-10	153	144	9	103	5.882353e-02	1	exome+100bp flanks	34834024	36	86	1.033472e-06	2.468851e-06
TCGA-KL-8342-01A-11D-2310-10	74	71	3	50	4.054054e-02	1	exome+100bp flanks	34834024	19	48	5.454437e-07	1.377963e-06
TCGA-KL-8343-01A-11D-2310-10	90	87	3	72	3.333333e-02	1	exome+100bp flanks	34834024	15	65	4.306135e-07	1.865992e-06
TCGA-KL-8344-01A-11D-2310-10	73	69	4	51	5.479452e-02	1	exome+100bp flanks	34834024	17	46	4.880286e-07	1.320548e-06
TCGA-KL-8345-01A-11D-2310-10	68	66	2	49	2.941176e-02	0	coding only	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-KL-8346-01A-11D-2310-10	88	85	3	62	3.409091e-02	1	exome+100bp flanks	34834024	21	55	6.028589e-07	1.578916e-06
TCGA-KM-8438-01A-11D-2310-10	100	98	2	73	2.000000e-02	0	coding only	34834024	24	65	6.889816e-07	1.865992e-06
TCGA-KM-8439-01A-11D-2310-10	50	50	0	40	0	0	coding only	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-KM-8440-01A-11D-2310-10	73	66	7	50	9.589041e-02	1	exome+100bp flanks	34834024	15	44	4.306135e-07	1.263133e-06
TCGA-KM-8441-01A-11D-2310-10	66	64	2	52	3.030303e-02	1	exome+100bp flanks	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-KM-8442-01A-11D-2310-10	87	83	4	57	4.597701e-02	1	exome+100bp flanks	34834024	24	53	6.889816e-07	1.521501e-06
TCGA-KM-8443-01A-11D-2310-10	70	68	2	57	2.857143e-02	0	coding only	34834024	11	53	3.157832e-07	1.521501e-06
TCGA-KM-8476-01A-11D-2310-10	113	109	4	78	3.539823e-02	1	exome+100bp flanks	34834024	29	75	8.325194e-07	2.153067e-06
TCGA-KM-8477-01A-11D-2310-10	62	60	2	41	3.225806e-02	1	exome+100bp flanks	34834024	17	37	4.880286e-07	1.062180e-06
TCGA-KM-8639-01A-11D-2397-10	67	64	3	52	4.477612e-02	1	exome+100bp flanks	34834024	12	50	3.444908e-07	1.435378e-06
TCGA-KN-8418-01A-11D-2310-10	61	59	2	41	3.278689e-02	1	exome+100bp flanks	34834024	17	36	4.880286e-07	1.033472e-06
TCGA-KN-8419-01A-11D-2310-10	72	70	2	47	2.777778e-02	0	coding only	34834024	22	41	6.315664e-07	1.177010e-06
TCGA-KN-8421-01A-11D-2310-10	67	62	5	41	7.462687e-02	1	exome+100bp flanks	34834024	19	37	5.454437e-07	1.062180e-06
TCGA-KN-8422-01A-11D-2310-10	76	73	3	54	3.947368e-02	1	exome+100bp flanks	34834024	18	50	5.167362e-07	1.435378e-06
TCGA-KN-8423-01A-11D-2310-10	70	67	3	46	4.285714e-02	1	exome+100bp flanks	34834024	20	43	5.741513e-07	1.234425e-06
TCGA-KN-8424-01A-11D-2310-10	97	92	5	62	5.154639e-02	1	exome+100bp flanks	34834024	29	60	8.325194e-07	1.722454e-06
TCGA-KN-8425-01A-11D-2310-10	82	80	2	67	2.439024e-02	0	coding only	34834024	8	62	2.296605e-07	1.779869e-06
TCGA-KN-8426-01A-11D-2310-10	96	89	7	64	7.291667e-02	1	exome+100bp flanks	34834024	23	64	6.602740e-07	1.837284e-06
TCGA-KN-8427-01A-11D-2310-10	133	129	4	95	3.007519e-02	1	exome+100bp flanks	34834024	34	90	9.760572e-07	2.583681e-06
TCGA-KN-8428-01A-11D-2310-10	1162	1121	41	793	3.528399e-02	1	exome+100bp flanks	34834024	306	738	8.784515e-06	2.118618e-05
TCGA-KN-8429-01A-11D-2310-10	85	77	8	56	9.411765e-02	1	exome+100bp flanks	34834024	20	50	5.741513e-07	1.435378e-06
TCGA-KN-8430-01A-11D-2310-10	129	123	6	95	4.651163e-02	1	exome+100bp flanks	34834024	26	90	7.463967e-07	2.583681e-06
TCGA-KN-8431-01A-11D-2310-10	74	64	10	47	1.351351e-01	1	exome+100bp flanks	34834024	13	40	3.731983e-07	1.148303e-06
TCGA-KN-8432-01A-11D-2310-10	139	136	3	106	2.158273e-02	0	coding only	34834024	30	92	8.612269e-07	2.641096e-06
TCGA-KN-8433-01A-11D-2310-10	275	266	9	175	3.272727e-02	1	exome+100bp flanks	34834024	82	163	2.354020e-06	4.679333e-06
TCGA-KN-8434-01A-11D-2310-10	77	74	3	55	3.896104e-02	1	exome+100bp flanks	34834024	19	46	5.454437e-07	1.320548e-06
TCGA-KN-8435-01A-11D-2310-10	93	88	5	68	5.376344e-02	1	exome+100bp flanks	34834024	19	61	5.454437e-07	1.751161e-06
TCGA-KN-8436-01A-11D-2310-10	154	142	12	104	7.792208e-02	1	exome+100bp flanks	34834024	34	92	9.760572e-07	2.641096e-06
TCGA-KN-8437-01A-11D-2310-10	54	50	4	35	7.407407e-02	1	exome+100bp flanks	34834024	13	31	3.731983e-07	8.899345e-07
TCGA-KO-8403-01A-11D-2310-10	62	61	1	43	1.612903e-02	0	coding only	34834024	16	41	4.593210e-07	1.177010e-06
TCGA-KO-8404-01A-11D-2310-10	157	153	4	119	2.547771e-02	0	coding only	34834024	32	109	9.186421e-07	3.129125e-06
TCGA-KO-8405-01A-11D-2310-10	65	63	2	50	3.076923e-02	1	exome+100bp flanks	34834024	11	44	3.157832e-07	1.263133e-06
TCGA-KO-8406-01A-11D-2310-10	91	86	5	64	5.494505e-02	1	exome+100bp flanks	34834024	15	54	4.306135e-07	1.550208e-06
TCGA-KO-8407-01A-11D-2310-10	95	88	7	69	7.368421e-02	1	exome+100bp flanks	34834024	16	63	4.593210e-07	1.808577e-06
TCGA-KO-8408-01A-11D-2310-10	168	159	9	123	5.357143e-02	1	exome+100bp flanks	34834024	31	117	8.899345e-07	3.358785e-06
TCGA-KO-8409-01A-11D-2310-10	108	101	7	82	6.481481e-02	1	exome+100bp flanks	34834024	19	77	5.454437e-07	2.210482e-06
TCGA-KO-8410-01A-11D-2310-10	86	74	12	54	1.395349e-01	1	exome+100bp flanks	34834024	16	43	4.593210e-07	1.234425e-06
TCGA-KO-8411-01A-11D-2310-10	74	72	2	54	2.702703e-02	0	coding only	34834024	16	46	4.593210e-07	1.320548e-06
TCGA-KO-8413-01A-11D-2310-10	59	59	0	41	0	0	coding only	34834024	17	36	4.880286e-07	1.033472e-06
TCGA-KO-8414-01A-11D-2310-10	64	59	5	42	7.812500e-02	1	exome+100bp flanks	34834024	17	37	4.880286e-07	1.062180e-06
TCGA-KO-8415-01A-11D-2310-10	93	89	4	56	4.301075e-02	1	exome+100bp flanks	34834024	29	50	8.325194e-07	1.435378e-06
TCGA-KO-8416-01A-11D-2310-10	82	80	2	53	2.439024e-02	0	coding only	34834024	24	47	6.889816e-07	1.349256e-06
TCGA-KO-8417-01A-11D-2310-10	106	102	4	74	3.773585e-02	1	exome+100bp flanks	34834024	28	67	8.038118e-07	1.923407e-06
TCGA-KV-A6GD-01A-11D-A31X-10	66	66	0	49	0	0	coding only	34834024	16	44	4.593210e-07	1.263133e-06
TCGA-KV-A6GE-01A-11D-A31X-10	22	21	1	17	4.545455e-02	1	exome+100bp flanks	34834024	4	15	1.148303e-07	4.306135e-07
TCGA-KV-A74V-01A-11D-A33Q-10	20	19	1	18	5.000000e-02	1	exome+100bp flanks	34834024	1	17	2.870756e-08	4.880286e-07
TCGA-MH-A55W-01A-11D-A26P-10	79	78	1	63	1.265823e-02	0	coding only	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-MH-A55Z-01A-11D-A26P-10	94	90	4	66	4.255319e-02	1	exome+100bp flanks	34834024	22	60	6.315664e-07	1.722454e-06
TCGA-MH-A560-01A-11D-A26P-10	52	51	1	40	1.923077e-02	0	coding only	34834024	11	39	3.157832e-07	1.119595e-06
TCGA-MH-A561-01A-11D-A26P-10	102	98	4	83	3.921569e-02	1	exome+100bp flanks	34834024	14	78	4.019059e-07	2.239190e-06
TCGA-MH-A562-01A-11D-A26P-10	65	65	0	47	0	0	coding only	34834024	17	43	4.880286e-07	1.234425e-06
TCGA-MH-A854-01A-11D-A34Z-10	115	113	2	92	1.739130e-02	0	coding only	34834024	18	86	5.167362e-07	2.468851e-06
TCGA-MH-A855-01A-11D-A34Z-10	33	30	3	22	9.090909e-02	1	exome+100bp flanks	34834024	7	20	2.009530e-07	5.741513e-07
TCGA-MH-A856-01A-11D-A34Z-10	68	68	0	50	0	0	coding only	34834024	16	49	4.593210e-07	1.406671e-06
TCGA-MH-A857-01A-11D-A34Z-10	28	25	3	20	1.071429e-01	1	exome+100bp flanks	34834024	4	16	1.148303e-07	4.593210e-07
TCGA-O9-A75Z-01A-11D-A33Q-10	22	22	0	14	0	1	exome+100bp flanks	34834024	8	14	2.296605e-07	4.019059e-07
TCGA-P4-A5E6-01A-11D-A28G-10	101	99	2	75	1.980198e-02	0	coding only	34834024	21	66	6.028589e-07	1.894699e-06
TCGA-P4-A5E7-01A-31D-A28G-10	91	90	1	69	1.098901e-02	0	coding only	34834024	19	59	5.454437e-07	1.693746e-06
TCGA-P4-A5E8-01A-11D-A28G-10	50	49	1	40	2.000000e-02	0	coding only	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-P4-A5EA-01A-11D-A28G-10	59	59	0	52	0	0	coding only	34834024	6	49	1.722454e-07	1.406671e-06
TCGA-P4-A5EB-01A-11D-A28G-10	141	136	5	106	3.546099e-02	1	exome+100bp flanks	34834024	30	96	8.612269e-07	2.755926e-06
TCGA-P4-A5ED-01A-11D-A28G-10	21	21	0	16	0	1	exome+100bp flanks	34834024	5	16	1.435378e-07	4.593210e-07
TCGA-P4-AAVL-01A-11D-A42J-10	87	83	4	67	4.597701e-02	1	exome+100bp flanks	34834024	15	64	4.306135e-07	1.837284e-06
TCGA-P4-AAVM-01A-11D-A42J-10	56	55	1	35	1.785714e-02	0	coding only	34834024	19	35	5.454437e-07	1.004765e-06
TCGA-PJ-A5Z8-01A-11D-A28G-10	69	67	2	53	2.898551e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-PJ-A5Z9-01A-11D-A28G-10	59	54	5	39	8.474576e-02	1	exome+100bp flanks	34834024	14	36	4.019059e-07	1.033472e-06
TCGA-PJ-A8JU-01A-11D-A35Z-10	109	105	4	82	3.669725e-02	1	exome+100bp flanks	34834024	21	76	6.028589e-07	2.181775e-06
TCGA-Q2-A5QZ-01A-11D-A28G-10	115	111	4	82	3.478261e-02	1	exome+100bp flanks	34834024	25	72	7.176891e-07	2.066945e-06
TCGA-SX-A71R-01A-12D-A33Q-10	41	38	3	31	7.317073e-02	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-SX-A71S-01A-11D-A33Q-10	131	129	2	99	1.526718e-02	0	coding only	34834024	28	93	8.038118e-07	2.669804e-06
TCGA-SX-A71U-01A-12D-A33Q-10	105	101	4	78	3.809524e-02	1	exome+100bp flanks	34834024	20	68	5.741513e-07	1.952114e-06
TCGA-SX-A71V-01A-11D-A33Q-10	108	103	5	84	4.629630e-02	1	exome+100bp flanks	34834024	18	76	5.167362e-07	2.181775e-06
TCGA-SX-A71W-01A-12D-A34Z-10	34	34	0	27	0	1	exome+100bp flanks	34834024	7	21	2.009530e-07	6.028589e-07
TCGA-SX-A7SL-01A-11D-A34Z-10	88	87	1	72	1.136364e-02	0	coding only	34834024	14	64	4.019059e-07	1.837284e-06
TCGA-SX-A7SM-01A-11D-A34Z-10	84	83	1	63	1.190476e-02	0	coding only	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-SX-A7SN-01A-11D-A34Z-10	103	100	3	81	2.912621e-02	0	coding only	34834024	18	73	5.167362e-07	2.095652e-06
TCGA-SX-A7SO-01A-11D-A34Z-10	50	47	3	39	6.000000e-02	1	exome+100bp flanks	34834024	7	32	2.009530e-07	9.186421e-07
TCGA-SX-A7SP-01A-11D-A34Z-10	83	80	3	64	3.614458e-02	1	exome+100bp flanks	34834024	15	57	4.306135e-07	1.636331e-06
TCGA-SX-A7SQ-01A-12D-A35Z-10	91	91	0	62	0	0	coding only	34834024	26	55	7.463967e-07	1.578916e-06
TCGA-SX-A7SR-01A-12D-A35Z-10	92	90	2	73	2.173913e-02	0	coding only	34834024	17	64	4.880286e-07	1.837284e-06
TCGA-SX-A7SS-01A-11D-A35Z-10	121	117	4	96	3.305785e-02	1	exome+100bp flanks	34834024	19	88	5.454437e-07	2.526266e-06
TCGA-SX-A7SU-01A-11D-A35Z-10	44	42	2	34	4.545455e-02	1	exome+100bp flanks	34834024	8	31	2.296605e-07	8.899345e-07
TCGA-UN-AAZ9-01A-11D-A382-10	25	24	1	21	4.000000e-02	1	exome+100bp flanks	34834024	2	21	5.741513e-08	6.028589e-07
TCGA-UZ-A9PJ-01A-11D-A382-10	60	58	2	40	3.333333e-02	1	exome+100bp flanks	34834024	15	36	4.306135e-07	1.033472e-06
TCGA-UZ-A9PK-01A-11D-A382-10	66	65	1	53	1.515152e-02	0	coding only	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-UZ-A9PL-01A-11D-A382-10	75	71	4	57	5.333333e-02	1	exome+100bp flanks	34834024	14	54	4.019059e-07	1.550208e-06
TCGA-UZ-A9PM-01A-21D-A382-10	58	55	3	42	5.172414e-02	1	exome+100bp flanks	34834024	12	40	3.444908e-07	1.148303e-06
TCGA-UZ-A9PN-01A-11D-A382-10	65	62	3	48	4.615385e-02	1	exome+100bp flanks	34834024	11	44	3.157832e-07	1.263133e-06
TCGA-UZ-A9PO-01A-11D-A382-10	110	108	2	88	1.818182e-02	0	coding only	34834024	19	83	5.454437e-07	2.382728e-06
TCGA-UZ-A9PP-01A-11D-A42J-10	77	75	2	65	2.597403e-02	0	coding only	34834024	9	57	2.583681e-07	1.636331e-06
TCGA-UZ-A9PR-01A-11D-A42J-10	106	105	1	83	9.433962e-03	0	coding only	34834024	21	77	6.028589e-07	2.210482e-06
TCGA-UZ-A9PS-01A-11D-A42J-10	160	159	1	123	6.250000e-03	0	coding only	34834024	35	114	1.004765e-06	3.272662e-06
TCGA-UZ-A9PU-01A-11D-A42J-10	66	66	0	58	0	0	coding only	34834024	8	55	2.296605e-07	1.578916e-06
TCGA-UZ-A9PV-01A-11D-A42J-10	69	67	2	54	2.898551e-02	0	coding only	34834024	11	51	3.157832e-07	1.464086e-06
TCGA-UZ-A9PX-01A-11D-A42J-10	108	105	3	83	2.777778e-02	0	coding only	34834024	21	79	6.028589e-07	2.267898e-06
TCGA-UZ-A9PZ-01A-11D-A42J-10	47	47	0	36	0	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-UZ-A9Q0-01A-12D-A42J-10	70	69	1	55	1.428571e-02	0	coding only	34834024	13	49	3.731983e-07	1.406671e-06
TCGA-UZ-A9Q1-01A-11D-A42J-10	84	81	3	53	3.571429e-02	1	exome+100bp flanks	34834024	26	48	7.463967e-07	1.377963e-06
TCGA-V9-A7HT-01A-11D-A33Q-10	73	72	1	58	1.369863e-02	0	coding only	34834024	14	49	4.019059e-07	1.406671e-06
TCGA-WN-A9G9-01A-12D-A36X-10	65	61	4	47	6.153846e-02	1	exome+100bp flanks	34834024	14	44	4.019059e-07	1.263133e-06
TCGA-WN-AB4C-01A-11D-A42J-10	96	95	1	75	1.041667e-02	0	coding only	34834024	20	69	5.741513e-07	1.980822e-06
TCGA-Y8-A894-01A-11D-A35Z-10	96	93	3	73	3.125000e-02	1	exome+100bp flanks	34834024	17	66	4.880286e-07	1.894699e-06
TCGA-Y8-A895-01A-11D-A35Z-10	103	97	6	80	5.825243e-02	1	exome+100bp flanks	34834024	15	76	4.306135e-07	2.181775e-06
TCGA-Y8-A896-01A-11D-A35Z-10	110	105	5	82	4.545455e-02	1	exome+100bp flanks	34834024	22	76	6.315664e-07	2.181775e-06
TCGA-Y8-A897-01A-11D-A35Z-10	61	60	1	47	1.639344e-02	0	coding only	34834024	11	43	3.157832e-07	1.234425e-06
TCGA-Y8-A898-01A-11D-A34Z-10	83	82	1	66	1.204819e-02	0	coding only	34834024	13	62	3.731983e-07	1.779869e-06
TCGA-Y8-A8RY-01A-11D-A36X-10	74	73	1	55	1.351351e-02	0	coding only	34834024	17	49	4.880286e-07	1.406671e-06
TCGA-Y8-A8RZ-01A-11D-A36X-10	59	59	0	47	0	0	coding only	34834024	12	44	3.444908e-07	1.263133e-06
TCGA-Y8-A8S0-01A-11D-A36X-10	44	42	2	31	4.545455e-02	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-Y8-A8S1-01A-11D-A36X-10	59	58	1	47	1.694915e-02	0	coding only	34834024	10	41	2.870756e-07	1.177010e-06