This pipeline computes the correlation between significantly recurrent gene mutations and molecular subtypes.
Testing the association between mutation status of 26 genes and 10 molecular subtypes across 282 patients, 19 significant findings detected with P value < 0.05 and Q value < 0.25.
-
SETD2 mutation correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
-
NF2 mutation correlated to 'METHLYATION_CNMF'.
-
MET mutation correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
-
NEFH mutation correlated to 'CN_CNMF'.
-
KRAS mutation correlated to 'METHLYATION_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
-
SMARCB1 mutation correlated to 'METHLYATION_CNMF'.
-
TP53 mutation correlated to 'MRNASEQ_CHIERARCHICAL'.
-
PBRM1 mutation correlated to 'METHLYATION_CNMF' and 'MIRSEQ_CHIERARCHICAL'.
-
SAV1 mutation correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nMutated (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
SETD2 | 16 (6%) | 266 |
0.177 (0.661) |
1e-05 (0.0026) |
0.0826 (0.482) |
0.0597 (0.458) |
0.0161 (0.234) |
0.00387 (0.118) |
0.0482 (0.418) |
0.0041 (0.118) |
0.77 (1.00) |
0.86 (1.00) |
MET | 21 (7%) | 261 |
0.629 (0.998) |
0.00039 (0.0253) |
0.0834 (0.482) |
0.061 (0.458) |
0.00974 (0.185) |
0.00092 (0.0478) |
0.0302 (0.357) |
0.446 (0.913) |
0.85 (1.00) |
0.0162 (0.234) |
SAV1 | 6 (2%) | 276 |
0.0387 (0.387) |
0.00584 (0.138) |
0.376 (0.853) |
0.384 (0.853) |
0.00029 (0.0251) |
0.00019 (0.0247) |
0.296 (0.824) |
0.157 (0.648) |
0.329 (0.824) |
0.388 (0.853) |
KRAS | 5 (2%) | 277 |
0.306 (0.824) |
0.00996 (0.185) |
0.486 (0.927) |
0.0178 (0.244) |
0.829 (1.00) |
0.524 (0.959) |
0.373 (0.853) |
0.566 (0.987) |
||
PBRM1 | 11 (4%) | 271 |
0.838 (1.00) |
0.00227 (0.0843) |
0.223 (0.755) |
0.17 (0.66) |
0.0797 (0.482) |
0.0732 (0.458) |
0.041 (0.395) |
0.00186 (0.0806) |
0.365 (0.853) |
0.38 (0.853) |
NF2 | 10 (4%) | 272 |
0.236 (0.786) |
0.00498 (0.129) |
0.68 (1.00) |
0.765 (1.00) |
0.178 (0.661) |
0.112 (0.551) |
0.79 (1.00) |
0.851 (1.00) |
0.872 (1.00) |
0.745 (1.00) |
NEFH | 6 (2%) | 276 |
0.00932 (0.185) |
0.136 (0.591) |
0.564 (0.987) |
0.461 (0.916) |
0.325 (0.824) |
0.638 (0.998) |
0.635 (0.998) |
0.77 (1.00) |
0.222 (0.755) |
0.383 (0.853) |
SMARCB1 | 6 (2%) | 276 |
0.266 (0.824) |
0.014 (0.227) |
1 (1.00) |
0.546 (0.972) |
0.106 (0.551) |
0.143 (0.601) |
0.299 (0.824) |
0.331 (0.824) |
0.036 (0.381) |
0.122 (0.556) |
TP53 | 7 (2%) | 275 |
0.272 (0.824) |
0.0715 (0.458) |
0.267 (0.824) |
1 (1.00) |
0.139 (0.594) |
0.0137 (0.227) |
0.45 (0.913) |
0.722 (1.00) |
0.468 (0.916) |
0.122 (0.556) |
ZNF814 | 9 (3%) | 273 |
0.902 (1.00) |
0.621 (0.998) |
1 (1.00) |
0.641 (0.998) |
0.732 (1.00) |
1 (1.00) |
0.116 (0.551) |
0.293 (0.824) |
1 (1.00) |
0.774 (1.00) |
CUL3 | 10 (4%) | 272 |
0.0464 (0.418) |
0.0662 (0.458) |
0.472 (0.916) |
0.507 (0.938) |
0.217 (0.754) |
0.164 (0.657) |
0.113 (0.551) |
0.187 (0.666) |
0.177 (0.661) |
0.499 (0.934) |
PCF11 | 11 (4%) | 271 |
0.33 (0.824) |
0.316 (0.824) |
0.342 (0.831) |
0.0366 (0.381) |
0.116 (0.551) |
0.323 (0.824) |
0.881 (1.00) |
0.39 (0.853) |
0.774 (1.00) |
0.376 (0.853) |
BCLAF1 | 6 (2%) | 276 |
0.889 (1.00) |
0.403 (0.862) |
0.639 (0.998) |
0.813 (1.00) |
0.849 (1.00) |
0.868 (1.00) |
0.509 (0.938) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
PAM | 3 (1%) | 279 |
0.781 (1.00) |
0.109 (0.551) |
0.0625 (0.458) |
0.69 (1.00) |
0.705 (1.00) |
1 (1.00) |
0.266 (0.824) |
0.0209 (0.272) |
||
KDM6A | 10 (4%) | 272 |
0.444 (0.913) |
0.0679 (0.458) |
1 (1.00) |
0.798 (1.00) |
0.464 (0.916) |
0.288 (0.824) |
0.0858 (0.485) |
0.551 (0.975) |
0.31 (0.824) |
0.589 (0.998) |
AR | 13 (5%) | 269 |
0.381 (0.853) |
0.336 (0.824) |
1 (1.00) |
0.859 (1.00) |
0.755 (1.00) |
0.241 (0.795) |
0.612 (0.998) |
0.725 (1.00) |
0.608 (0.998) |
0.601 (0.998) |
KRTAP4-5 | 5 (2%) | 277 |
0.724 (1.00) |
0.705 (1.00) |
0.834 (1.00) |
0.27 (0.824) |
0.962 (1.00) |
1 (1.00) |
0.136 (0.591) |
0.74 (1.00) |
0.695 (1.00) |
0.386 (0.853) |
BRAF | 4 (1%) | 278 |
0.443 (0.913) |
0.66 (1.00) |
1 (1.00) |
0.609 (0.998) |
0.938 (1.00) |
1 (1.00) |
0.428 (0.898) |
0.47 (0.916) |
0.316 (0.824) |
0.129 (0.578) |
KIAA0922 | 5 (2%) | 277 |
0.767 (1.00) |
0.959 (1.00) |
0.281 (0.824) |
0.592 (0.998) |
0.718 (1.00) |
0.615 (0.998) |
0.11 (0.551) |
0.288 (0.824) |
||
KRT2 | 5 (2%) | 277 |
0.0695 (0.458) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
0.622 (0.998) |
1 (1.00) |
0.775 (1.00) |
0.739 (1.00) |
0.317 (0.824) |
0.535 (0.972) |
ALMS1 | 8 (3%) | 274 |
0.414 (0.874) |
0.947 (1.00) |
0.896 (1.00) |
0.308 (0.824) |
0.946 (1.00) |
0.792 (1.00) |
0.893 (1.00) |
1 (1.00) |
1 (1.00) |
0.681 (1.00) |
GXYLT1 | 4 (1%) | 278 |
0.274 (0.824) |
0.671 (1.00) |
0.482 (0.927) |
0.468 (0.916) |
1 (1.00) |
1 (1.00) |
0.168 (0.66) |
0.689 (1.00) |
0.542 (0.972) |
0.0293 (0.357) |
ATP1B1 | 7 (2%) | 275 |
0.16 (0.649) |
0.606 (0.998) |
0.852 (1.00) |
0.608 (0.998) |
0.0541 (0.454) |
0.182 (0.662) |
0.202 (0.711) |
0.722 (1.00) |
0.0469 (0.418) |
0.851 (1.00) |
PTEN | 7 (2%) | 275 |
0.889 (1.00) |
0.183 (0.662) |
1 (1.00) |
0.744 (1.00) |
0.336 (0.824) |
0.405 (0.862) |
0.265 (0.824) |
0.495 (0.932) |
0.869 (1.00) |
0.104 (0.551) |
CALCR | 3 (1%) | 279 |
1 (1.00) |
0.745 (1.00) |
0.631 (0.998) |
0.884 (1.00) |
0.283 (0.824) |
0.0711 (0.458) |
0.712 (1.00) |
0.488 (0.927) |
0.777 (1.00) |
1 (1.00) |
IGSF3 | 4 (1%) | 278 |
0.542 (0.972) |
0.604 (0.998) |
0.0922 (0.51) |
0.074 (0.458) |
0.373 (0.853) |
0.395 (0.855) |
0.969 (1.00) |
0.0683 (0.458) |
0.0323 (0.365) |
1 (1.00) |
P value = 0.177 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
SETD2 MUTATED | 6 | 1 | 3 | 6 |
SETD2 WILD-TYPE | 96 | 70 | 45 | 53 |
P value = 1e-05 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
SETD2 MUTATED | 0 | 3 | 1 | 1 | 11 | 0 |
SETD2 WILD-TYPE | 56 | 39 | 57 | 57 | 15 | 27 |
P value = 0.0826 (Fisher's exact test), Q value = 0.48
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
SETD2 MUTATED | 2 | 4 | 7 |
SETD2 WILD-TYPE | 73 | 75 | 48 |
P value = 0.0597 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
SETD2 MUTATED | 0 | 4 | 3 | 6 |
SETD2 WILD-TYPE | 39 | 61 | 60 | 36 |
P value = 0.0161 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
SETD2 MUTATED | 0 | 2 | 8 | 0 | 6 |
SETD2 WILD-TYPE | 32 | 86 | 61 | 31 | 55 |
P value = 0.00387 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
SETD2 MUTATED | 13 | 2 | 1 |
SETD2 WILD-TYPE | 101 | 119 | 45 |
P value = 0.0482 (Fisher's exact test), Q value = 0.42
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
SETD2 MUTATED | 1 | 4 | 1 | 6 | 3 | 1 |
SETD2 WILD-TYPE | 28 | 33 | 63 | 34 | 77 | 31 |
P value = 0.0041 (Fisher's exact test), Q value = 0.12
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
SETD2 MUTATED | 13 | 1 | 2 |
SETD2 WILD-TYPE | 103 | 78 | 85 |
P value = 0.77 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
SETD2 MUTATED | 5 | 3 | 5 |
SETD2 WILD-TYPE | 65 | 71 | 69 |
P value = 0.86 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
SETD2 MUTATED | 6 | 6 | 1 |
SETD2 WILD-TYPE | 85 | 89 | 31 |
P value = 0.236 (Fisher's exact test), Q value = 0.79
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
NF2 MUTATED | 4 | 1 | 4 | 1 |
NF2 WILD-TYPE | 98 | 70 | 44 | 58 |
P value = 0.00498 (Fisher's exact test), Q value = 0.13
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
NF2 MUTATED | 1 | 0 | 0 | 2 | 4 | 2 |
NF2 WILD-TYPE | 55 | 42 | 58 | 56 | 22 | 25 |
P value = 0.68 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
NF2 MUTATED | 4 | 2 | 2 |
NF2 WILD-TYPE | 71 | 77 | 53 |
P value = 0.765 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
NF2 MUTATED | 1 | 2 | 4 | 1 |
NF2 WILD-TYPE | 38 | 63 | 59 | 41 |
P value = 0.178 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
NF2 MUTATED | 2 | 3 | 0 | 1 | 4 |
NF2 WILD-TYPE | 30 | 85 | 69 | 30 | 57 |
P value = 0.112 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
NF2 MUTATED | 2 | 4 | 4 |
NF2 WILD-TYPE | 112 | 117 | 42 |
P value = 0.79 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
NF2 MUTATED | 0 | 1 | 3 | 2 | 4 | 0 |
NF2 WILD-TYPE | 29 | 36 | 61 | 38 | 76 | 32 |
P value = 0.851 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
NF2 MUTATED | 4 | 2 | 4 |
NF2 WILD-TYPE | 112 | 77 | 83 |
P value = 0.872 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
NF2 MUTATED | 1 | 2 | 3 |
NF2 WILD-TYPE | 69 | 72 | 71 |
P value = 0.745 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
NF2 MUTATED | 3 | 3 | 0 |
NF2 WILD-TYPE | 88 | 92 | 32 |
P value = 0.902 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
ZNF814 MUTATED | 4 | 2 | 2 | 1 |
ZNF814 WILD-TYPE | 98 | 69 | 46 | 58 |
P value = 0.621 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
ZNF814 MUTATED | 2 | 1 | 3 | 1 | 2 | 0 |
ZNF814 WILD-TYPE | 54 | 41 | 55 | 57 | 24 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
ZNF814 MUTATED | 2 | 3 | 2 |
ZNF814 WILD-TYPE | 73 | 76 | 53 |
P value = 0.641 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
ZNF814 MUTATED | 0 | 3 | 3 | 1 |
ZNF814 WILD-TYPE | 39 | 62 | 60 | 41 |
P value = 0.732 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
ZNF814 MUTATED | 0 | 3 | 3 | 0 | 3 |
ZNF814 WILD-TYPE | 32 | 85 | 66 | 31 | 58 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
ZNF814 MUTATED | 4 | 4 | 1 |
ZNF814 WILD-TYPE | 110 | 117 | 45 |
P value = 0.116 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
ZNF814 MUTATED | 0 | 0 | 3 | 4 | 1 | 1 |
ZNF814 WILD-TYPE | 29 | 37 | 61 | 36 | 79 | 31 |
P value = 0.293 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
ZNF814 MUTATED | 6 | 2 | 1 |
ZNF814 WILD-TYPE | 110 | 77 | 86 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
ZNF814 MUTATED | 2 | 3 | 2 |
ZNF814 WILD-TYPE | 68 | 71 | 72 |
P value = 0.774 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
ZNF814 MUTATED | 3 | 4 | 0 |
ZNF814 WILD-TYPE | 88 | 91 | 32 |
P value = 0.629 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
MET MUTATED | 7 | 8 | 3 | 3 |
MET WILD-TYPE | 95 | 63 | 45 | 56 |
P value = 0.00039 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
MET MUTATED | 4 | 1 | 13 | 2 | 0 | 0 |
MET WILD-TYPE | 52 | 41 | 45 | 56 | 26 | 27 |
P value = 0.0834 (Fisher's exact test), Q value = 0.48
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
MET MUTATED | 8 | 9 | 1 |
MET WILD-TYPE | 67 | 70 | 54 |
P value = 0.061 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
MET MUTATED | 3 | 9 | 6 | 0 |
MET WILD-TYPE | 36 | 56 | 57 | 42 |
P value = 0.00974 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
MET MUTATED | 5 | 8 | 1 | 5 | 2 |
MET WILD-TYPE | 27 | 80 | 68 | 26 | 59 |
P value = 0.00092 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
MET MUTATED | 2 | 17 | 2 |
MET WILD-TYPE | 112 | 104 | 44 |
P value = 0.0302 (Fisher's exact test), Q value = 0.36
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
MET MUTATED | 0 | 0 | 4 | 3 | 8 | 6 |
MET WILD-TYPE | 29 | 37 | 60 | 37 | 72 | 26 |
P value = 0.446 (Fisher's exact test), Q value = 0.91
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
MET MUTATED | 8 | 4 | 9 |
MET WILD-TYPE | 108 | 75 | 78 |
P value = 0.85 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
MET MUTATED | 4 | 6 | 6 |
MET WILD-TYPE | 66 | 68 | 68 |
P value = 0.0162 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
MET MUTATED | 7 | 3 | 6 |
MET WILD-TYPE | 84 | 92 | 26 |
P value = 0.00932 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
NEFH MUTATED | 0 | 1 | 4 | 1 |
NEFH WILD-TYPE | 102 | 70 | 44 | 58 |
P value = 0.136 (Fisher's exact test), Q value = 0.59
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
NEFH MUTATED | 2 | 0 | 0 | 4 | 0 | 0 |
NEFH WILD-TYPE | 54 | 42 | 58 | 54 | 26 | 27 |
P value = 0.564 (Fisher's exact test), Q value = 0.99
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
NEFH MUTATED | 2 | 2 | 0 |
NEFH WILD-TYPE | 73 | 77 | 55 |
P value = 0.461 (Fisher's exact test), Q value = 0.92
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
NEFH MUTATED | 2 | 1 | 1 | 0 |
NEFH WILD-TYPE | 37 | 64 | 62 | 42 |
P value = 0.325 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
NEFH MUTATED | 2 | 2 | 2 | 0 | 0 |
NEFH WILD-TYPE | 30 | 86 | 67 | 31 | 61 |
P value = 0.638 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
NEFH MUTATED | 2 | 4 | 0 |
NEFH WILD-TYPE | 112 | 117 | 46 |
P value = 0.635 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
NEFH MUTATED | 0 | 0 | 3 | 1 | 1 | 1 |
NEFH WILD-TYPE | 29 | 37 | 61 | 39 | 79 | 31 |
P value = 0.77 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
NEFH MUTATED | 3 | 2 | 1 |
NEFH WILD-TYPE | 113 | 77 | 86 |
P value = 0.222 (Fisher's exact test), Q value = 0.75
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
NEFH MUTATED | 1 | 3 | 0 |
NEFH WILD-TYPE | 69 | 71 | 74 |
P value = 0.383 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
NEFH MUTATED | 3 | 1 | 0 |
NEFH WILD-TYPE | 88 | 94 | 32 |
P value = 0.306 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
KRAS MUTATED | 3 | 0 | 0 | 2 |
KRAS WILD-TYPE | 99 | 71 | 48 | 57 |
P value = 0.00996 (Fisher's exact test), Q value = 0.18
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
KRAS MUTATED | 0 | 0 | 2 | 0 | 0 | 3 |
KRAS WILD-TYPE | 56 | 42 | 56 | 58 | 26 | 24 |
P value = 0.486 (Fisher's exact test), Q value = 0.93
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
KRAS MUTATED | 0 | 2 | 0 | 1 | 2 |
KRAS WILD-TYPE | 32 | 86 | 69 | 30 | 59 |
P value = 0.0178 (Fisher's exact test), Q value = 0.24
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
KRAS MUTATED | 0 | 2 | 3 |
KRAS WILD-TYPE | 114 | 119 | 43 |
P value = 0.829 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
KRAS MUTATED | 0 | 0 | 1 | 1 | 3 | 0 |
KRAS WILD-TYPE | 29 | 37 | 63 | 39 | 77 | 32 |
P value = 0.524 (Fisher's exact test), Q value = 0.96
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
KRAS MUTATED | 1 | 1 | 3 |
KRAS WILD-TYPE | 115 | 78 | 84 |
P value = 0.373 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
KRAS MUTATED | 0 | 2 | 3 |
KRAS WILD-TYPE | 70 | 72 | 71 |
P value = 0.566 (Fisher's exact test), Q value = 0.99
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
KRAS MUTATED | 1 | 3 | 1 |
KRAS WILD-TYPE | 90 | 92 | 31 |
P value = 0.0464 (Fisher's exact test), Q value = 0.42
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
CUL3 MUTATED | 8 | 1 | 0 | 1 |
CUL3 WILD-TYPE | 94 | 70 | 48 | 58 |
P value = 0.0662 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
CUL3 MUTATED | 2 | 2 | 1 | 1 | 4 | 0 |
CUL3 WILD-TYPE | 54 | 40 | 57 | 57 | 22 | 27 |
P value = 0.472 (Fisher's exact test), Q value = 0.92
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
CUL3 MUTATED | 2 | 5 | 1 |
CUL3 WILD-TYPE | 73 | 74 | 54 |
P value = 0.507 (Fisher's exact test), Q value = 0.94
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
CUL3 MUTATED | 0 | 4 | 3 | 1 |
CUL3 WILD-TYPE | 39 | 61 | 60 | 41 |
P value = 0.217 (Fisher's exact test), Q value = 0.75
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
CUL3 MUTATED | 0 | 1 | 5 | 1 | 3 |
CUL3 WILD-TYPE | 32 | 87 | 64 | 30 | 58 |
P value = 0.164 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
CUL3 MUTATED | 7 | 2 | 1 |
CUL3 WILD-TYPE | 107 | 119 | 45 |
P value = 0.113 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
CUL3 MUTATED | 0 | 3 | 1 | 3 | 1 | 2 |
CUL3 WILD-TYPE | 29 | 34 | 63 | 37 | 79 | 30 |
P value = 0.187 (Fisher's exact test), Q value = 0.67
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
CUL3 MUTATED | 7 | 1 | 2 |
CUL3 WILD-TYPE | 109 | 78 | 85 |
P value = 0.177 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
CUL3 MUTATED | 5 | 1 | 2 |
CUL3 WILD-TYPE | 65 | 73 | 72 |
P value = 0.499 (Fisher's exact test), Q value = 0.93
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
CUL3 MUTATED | 5 | 2 | 1 |
CUL3 WILD-TYPE | 86 | 93 | 31 |
P value = 0.33 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
PCF11 MUTATED | 5 | 4 | 0 | 1 |
PCF11 WILD-TYPE | 97 | 67 | 48 | 58 |
P value = 0.316 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
PCF11 MUTATED | 3 | 4 | 2 | 1 | 0 | 0 |
PCF11 WILD-TYPE | 53 | 38 | 56 | 57 | 26 | 27 |
P value = 0.342 (Fisher's exact test), Q value = 0.83
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
PCF11 MUTATED | 3 | 1 | 3 |
PCF11 WILD-TYPE | 72 | 78 | 52 |
P value = 0.0366 (Fisher's exact test), Q value = 0.38
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
PCF11 MUTATED | 3 | 0 | 1 | 3 |
PCF11 WILD-TYPE | 36 | 65 | 62 | 39 |
P value = 0.116 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
PCF11 MUTATED | 0 | 3 | 5 | 2 | 0 |
PCF11 WILD-TYPE | 32 | 85 | 64 | 29 | 61 |
P value = 0.323 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
PCF11 MUTATED | 6 | 4 | 0 |
PCF11 WILD-TYPE | 108 | 117 | 46 |
P value = 0.881 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
PCF11 MUTATED | 1 | 2 | 2 | 2 | 4 | 0 |
PCF11 WILD-TYPE | 28 | 35 | 62 | 38 | 76 | 32 |
P value = 0.39 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
PCF11 MUTATED | 7 | 2 | 2 |
PCF11 WILD-TYPE | 109 | 77 | 85 |
P value = 0.774 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
PCF11 MUTATED | 3 | 2 | 4 |
PCF11 WILD-TYPE | 67 | 72 | 70 |
P value = 0.376 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
PCF11 MUTATED | 3 | 6 | 0 |
PCF11 WILD-TYPE | 88 | 89 | 32 |
P value = 0.889 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
BCLAF1 MUTATED | 2 | 1 | 1 | 2 |
BCLAF1 WILD-TYPE | 100 | 70 | 47 | 57 |
P value = 0.403 (Fisher's exact test), Q value = 0.86
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
BCLAF1 MUTATED | 2 | 0 | 0 | 2 | 1 | 1 |
BCLAF1 WILD-TYPE | 54 | 42 | 58 | 56 | 25 | 26 |
P value = 0.639 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
BCLAF1 MUTATED | 2 | 1 | 2 |
BCLAF1 WILD-TYPE | 73 | 78 | 53 |
P value = 0.813 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
BCLAF1 MUTATED | 1 | 2 | 2 | 0 |
BCLAF1 WILD-TYPE | 38 | 63 | 61 | 42 |
P value = 0.849 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
BCLAF1 MUTATED | 0 | 2 | 1 | 1 | 2 |
BCLAF1 WILD-TYPE | 32 | 86 | 68 | 30 | 59 |
P value = 0.868 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
BCLAF1 MUTATED | 3 | 2 | 1 |
BCLAF1 WILD-TYPE | 111 | 119 | 45 |
P value = 0.509 (Fisher's exact test), Q value = 0.94
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
BCLAF1 MUTATED | 0 | 2 | 2 | 0 | 1 | 1 |
BCLAF1 WILD-TYPE | 29 | 35 | 62 | 40 | 79 | 31 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
BCLAF1 MUTATED | 2 | 2 | 2 |
BCLAF1 WILD-TYPE | 114 | 77 | 85 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
BCLAF1 MUTATED | 1 | 1 | 2 |
BCLAF1 WILD-TYPE | 69 | 73 | 72 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
BCLAF1 MUTATED | 2 | 2 | 0 |
BCLAF1 WILD-TYPE | 89 | 93 | 32 |
P value = 0.781 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
PAM MUTATED | 1 | 1 | 1 | 0 |
PAM WILD-TYPE | 101 | 70 | 47 | 59 |
P value = 0.109 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
PAM MUTATED | 0 | 0 | 0 | 3 | 0 | 0 |
PAM WILD-TYPE | 56 | 42 | 58 | 55 | 26 | 27 |
P value = 0.0625 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
PAM MUTATED | 3 | 0 | 0 |
PAM WILD-TYPE | 72 | 79 | 55 |
P value = 0.69 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
PAM MUTATED | 0 | 1 | 2 | 0 |
PAM WILD-TYPE | 39 | 64 | 61 | 42 |
P value = 0.705 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
PAM MUTATED | 1 | 1 | 1 | 0 | 0 |
PAM WILD-TYPE | 31 | 87 | 68 | 31 | 61 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
PAM MUTATED | 1 | 2 | 0 |
PAM WILD-TYPE | 113 | 119 | 46 |
P value = 0.266 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
PAM MUTATED | 0 | 0 | 2 | 0 | 0 | 1 |
PAM WILD-TYPE | 29 | 37 | 62 | 40 | 80 | 31 |
P value = 0.0209 (Fisher's exact test), Q value = 0.27
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
PAM MUTATED | 0 | 3 | 0 |
PAM WILD-TYPE | 116 | 76 | 87 |
P value = 0.266 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
SMARCB1 MUTATED | 3 | 3 | 0 | 0 |
SMARCB1 WILD-TYPE | 99 | 68 | 48 | 59 |
P value = 0.014 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
SMARCB1 MUTATED | 0 | 4 | 0 | 1 | 1 | 0 |
SMARCB1 WILD-TYPE | 56 | 38 | 58 | 57 | 25 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
SMARCB1 MUTATED | 1 | 2 | 1 |
SMARCB1 WILD-TYPE | 74 | 77 | 54 |
P value = 0.546 (Fisher's exact test), Q value = 0.97
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
SMARCB1 MUTATED | 1 | 2 | 0 | 1 |
SMARCB1 WILD-TYPE | 38 | 63 | 63 | 41 |
P value = 0.106 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
SMARCB1 MUTATED | 1 | 0 | 4 | 0 | 1 |
SMARCB1 WILD-TYPE | 31 | 88 | 65 | 31 | 60 |
P value = 0.143 (Fisher's exact test), Q value = 0.6
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
SMARCB1 MUTATED | 5 | 1 | 0 |
SMARCB1 WILD-TYPE | 109 | 120 | 46 |
P value = 0.299 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
SMARCB1 MUTATED | 0 | 1 | 0 | 0 | 4 | 1 |
SMARCB1 WILD-TYPE | 29 | 36 | 64 | 40 | 76 | 31 |
P value = 0.331 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
SMARCB1 MUTATED | 3 | 0 | 3 |
SMARCB1 WILD-TYPE | 113 | 79 | 84 |
P value = 0.036 (Fisher's exact test), Q value = 0.38
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
SMARCB1 MUTATED | 0 | 0 | 4 |
SMARCB1 WILD-TYPE | 70 | 74 | 70 |
P value = 0.122 (Fisher's exact test), Q value = 0.56
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
SMARCB1 MUTATED | 0 | 4 | 0 |
SMARCB1 WILD-TYPE | 91 | 91 | 32 |
P value = 0.444 (Fisher's exact test), Q value = 0.91
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
KDM6A MUTATED | 4 | 1 | 1 | 4 |
KDM6A WILD-TYPE | 98 | 70 | 47 | 55 |
P value = 0.0679 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
KDM6A MUTATED | 1 | 4 | 0 | 3 | 0 | 2 |
KDM6A WILD-TYPE | 55 | 38 | 58 | 55 | 26 | 25 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
KDM6A MUTATED | 2 | 3 | 2 |
KDM6A WILD-TYPE | 73 | 76 | 53 |
P value = 0.798 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
KDM6A MUTATED | 1 | 1 | 3 | 2 |
KDM6A WILD-TYPE | 38 | 64 | 60 | 40 |
P value = 0.464 (Fisher's exact test), Q value = 0.92
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
KDM6A MUTATED | 1 | 2 | 5 | 0 | 2 |
KDM6A WILD-TYPE | 31 | 86 | 64 | 31 | 59 |
P value = 0.288 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
KDM6A MUTATED | 6 | 2 | 2 |
KDM6A WILD-TYPE | 108 | 119 | 44 |
P value = 0.0858 (Fisher's exact test), Q value = 0.49
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
KDM6A MUTATED | 3 | 3 | 2 | 0 | 1 | 1 |
KDM6A WILD-TYPE | 26 | 34 | 62 | 40 | 79 | 31 |
P value = 0.551 (Fisher's exact test), Q value = 0.97
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
KDM6A MUTATED | 6 | 2 | 2 |
KDM6A WILD-TYPE | 110 | 77 | 85 |
P value = 0.31 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
KDM6A MUTATED | 4 | 1 | 2 |
KDM6A WILD-TYPE | 66 | 73 | 72 |
P value = 0.589 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
KDM6A MUTATED | 4 | 3 | 0 |
KDM6A WILD-TYPE | 87 | 92 | 32 |
P value = 0.381 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
AR MUTATED | 6 | 4 | 0 | 3 |
AR WILD-TYPE | 96 | 67 | 48 | 56 |
P value = 0.336 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
AR MUTATED | 1 | 4 | 4 | 2 | 2 | 0 |
AR WILD-TYPE | 55 | 38 | 54 | 56 | 24 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
AR MUTATED | 3 | 3 | 2 |
AR WILD-TYPE | 72 | 76 | 53 |
P value = 0.859 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
AR MUTATED | 2 | 2 | 2 | 2 |
AR WILD-TYPE | 37 | 63 | 61 | 40 |
P value = 0.755 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
AR MUTATED | 1 | 6 | 3 | 0 | 3 |
AR WILD-TYPE | 31 | 82 | 66 | 31 | 58 |
P value = 0.241 (Fisher's exact test), Q value = 0.79
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
AR MUTATED | 7 | 6 | 0 |
AR WILD-TYPE | 107 | 115 | 46 |
P value = 0.612 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
AR MUTATED | 1 | 2 | 3 | 4 | 2 | 1 |
AR WILD-TYPE | 28 | 35 | 61 | 36 | 78 | 31 |
P value = 0.725 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
AR MUTATED | 7 | 3 | 3 |
AR WILD-TYPE | 109 | 76 | 84 |
P value = 0.608 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
AR MUTATED | 3 | 6 | 3 |
AR WILD-TYPE | 67 | 68 | 71 |
P value = 0.601 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
AR MUTATED | 7 | 4 | 1 |
AR WILD-TYPE | 84 | 91 | 31 |
P value = 0.272 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
TP53 MUTATED | 3 | 0 | 1 | 3 |
TP53 WILD-TYPE | 99 | 71 | 47 | 56 |
P value = 0.0715 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
TP53 MUTATED | 1 | 3 | 0 | 0 | 1 | 1 |
TP53 WILD-TYPE | 55 | 39 | 58 | 58 | 25 | 26 |
P value = 0.267 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
TP53 MUTATED | 0 | 1 | 2 |
TP53 WILD-TYPE | 75 | 78 | 53 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
TP53 MUTATED | 0 | 1 | 1 | 1 |
TP53 WILD-TYPE | 39 | 64 | 62 | 41 |
P value = 0.139 (Fisher's exact test), Q value = 0.59
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
TP53 MUTATED | 0 | 0 | 3 | 1 | 3 |
TP53 WILD-TYPE | 32 | 88 | 66 | 30 | 58 |
P value = 0.0137 (Fisher's exact test), Q value = 0.23
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
TP53 MUTATED | 4 | 0 | 3 |
TP53 WILD-TYPE | 110 | 121 | 43 |
P value = 0.45 (Fisher's exact test), Q value = 0.91
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
TP53 MUTATED | 1 | 2 | 1 | 2 | 1 | 0 |
TP53 WILD-TYPE | 28 | 35 | 63 | 38 | 79 | 32 |
P value = 0.722 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
TP53 MUTATED | 4 | 1 | 2 |
TP53 WILD-TYPE | 112 | 78 | 85 |
P value = 0.468 (Fisher's exact test), Q value = 0.92
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
TP53 MUTATED | 2 | 0 | 2 |
TP53 WILD-TYPE | 68 | 74 | 72 |
P value = 0.122 (Fisher's exact test), Q value = 0.56
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
TP53 MUTATED | 0 | 4 | 0 |
TP53 WILD-TYPE | 91 | 91 | 32 |
P value = 0.724 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
KRTAP4-5 MUTATED | 2 | 2 | 1 | 0 |
KRTAP4-5 WILD-TYPE | 100 | 69 | 47 | 59 |
P value = 0.705 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
KRTAP4-5 MUTATED | 1 | 1 | 2 | 0 | 0 | 1 |
KRTAP4-5 WILD-TYPE | 55 | 41 | 56 | 58 | 26 | 26 |
P value = 0.834 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
KRTAP4-5 MUTATED | 2 | 1 | 1 |
KRTAP4-5 WILD-TYPE | 73 | 78 | 54 |
P value = 0.27 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
KRTAP4-5 MUTATED | 2 | 0 | 1 | 1 |
KRTAP4-5 WILD-TYPE | 37 | 65 | 62 | 41 |
P value = 0.962 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
KRTAP4-5 MUTATED | 1 | 2 | 1 | 0 | 1 |
KRTAP4-5 WILD-TYPE | 31 | 86 | 68 | 31 | 60 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
KRTAP4-5 MUTATED | 2 | 2 | 1 |
KRTAP4-5 WILD-TYPE | 112 | 119 | 45 |
P value = 0.136 (Fisher's exact test), Q value = 0.59
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
KRTAP4-5 MUTATED | 1 | 2 | 1 | 0 | 0 | 1 |
KRTAP4-5 WILD-TYPE | 28 | 35 | 63 | 40 | 80 | 31 |
P value = 0.74 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
KRTAP4-5 MUTATED | 3 | 1 | 1 |
KRTAP4-5 WILD-TYPE | 113 | 78 | 86 |
P value = 0.695 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
KRTAP4-5 MUTATED | 2 | 1 | 1 |
KRTAP4-5 WILD-TYPE | 68 | 73 | 73 |
P value = 0.386 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
KRTAP4-5 MUTATED | 3 | 1 | 0 |
KRTAP4-5 WILD-TYPE | 88 | 94 | 32 |
P value = 0.443 (Fisher's exact test), Q value = 0.91
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
BRAF MUTATED | 3 | 0 | 0 | 1 |
BRAF WILD-TYPE | 99 | 71 | 48 | 58 |
P value = 0.66 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
BRAF MUTATED | 2 | 0 | 1 | 0 | 0 | 0 |
BRAF WILD-TYPE | 54 | 42 | 57 | 58 | 26 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
BRAF MUTATED | 1 | 1 | 1 |
BRAF WILD-TYPE | 74 | 78 | 54 |
P value = 0.609 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
BRAF MUTATED | 1 | 1 | 0 | 1 |
BRAF WILD-TYPE | 38 | 64 | 63 | 41 |
P value = 0.938 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
BRAF MUTATED | 0 | 1 | 2 | 0 | 1 |
BRAF WILD-TYPE | 32 | 87 | 67 | 31 | 60 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
BRAF MUTATED | 2 | 2 | 0 |
BRAF WILD-TYPE | 112 | 119 | 46 |
P value = 0.428 (Fisher's exact test), Q value = 0.9
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
BRAF MUTATED | 1 | 0 | 0 | 1 | 1 | 1 |
BRAF WILD-TYPE | 28 | 37 | 64 | 39 | 79 | 31 |
P value = 0.47 (Fisher's exact test), Q value = 0.92
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
BRAF MUTATED | 3 | 0 | 1 |
BRAF WILD-TYPE | 113 | 79 | 86 |
P value = 0.316 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
BRAF MUTATED | 2 | 1 | 0 |
BRAF WILD-TYPE | 68 | 73 | 74 |
P value = 0.129 (Fisher's exact test), Q value = 0.58
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
BRAF MUTATED | 3 | 0 | 0 |
BRAF WILD-TYPE | 88 | 95 | 32 |
P value = 0.767 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
KIAA0922 MUTATED | 2 | 1 | 0 | 2 |
KIAA0922 WILD-TYPE | 100 | 70 | 48 | 57 |
P value = 0.959 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
KIAA0922 MUTATED | 2 | 1 | 1 | 1 | 0 | 0 |
KIAA0922 WILD-TYPE | 54 | 41 | 57 | 57 | 26 | 27 |
P value = 0.281 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
KIAA0922 MUTATED | 2 | 2 | 1 | 0 | 0 |
KIAA0922 WILD-TYPE | 30 | 86 | 68 | 31 | 61 |
P value = 0.592 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
KIAA0922 MUTATED | 1 | 3 | 1 |
KIAA0922 WILD-TYPE | 113 | 118 | 45 |
P value = 0.718 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
KIAA0922 MUTATED | 1 | 0 | 2 | 0 | 2 | 0 |
KIAA0922 WILD-TYPE | 28 | 37 | 62 | 40 | 78 | 32 |
P value = 0.615 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
KIAA0922 MUTATED | 1 | 2 | 2 |
KIAA0922 WILD-TYPE | 115 | 77 | 85 |
P value = 0.11 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
KIAA0922 MUTATED | 0 | 0 | 3 |
KIAA0922 WILD-TYPE | 70 | 74 | 71 |
P value = 0.288 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
KIAA0922 MUTATED | 0 | 3 | 0 |
KIAA0922 WILD-TYPE | 91 | 92 | 32 |
P value = 0.0695 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
KRT2 MUTATED | 1 | 4 | 0 | 0 |
KRT2 WILD-TYPE | 101 | 67 | 48 | 59 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
KRT2 MUTATED | 1 | 1 | 2 | 1 | 0 | 0 |
KRT2 WILD-TYPE | 55 | 41 | 56 | 57 | 26 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
KRT2 MUTATED | 2 | 2 | 1 |
KRT2 WILD-TYPE | 73 | 77 | 54 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
KRT2 MUTATED | 1 | 2 | 1 | 1 |
KRT2 WILD-TYPE | 38 | 63 | 62 | 41 |
P value = 0.622 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
KRT2 MUTATED | 0 | 2 | 2 | 1 | 0 |
KRT2 WILD-TYPE | 32 | 86 | 67 | 30 | 61 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
KRT2 MUTATED | 2 | 2 | 1 |
KRT2 WILD-TYPE | 112 | 119 | 45 |
P value = 0.775 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
KRT2 MUTATED | 0 | 1 | 2 | 0 | 1 | 1 |
KRT2 WILD-TYPE | 29 | 36 | 62 | 40 | 79 | 31 |
P value = 0.739 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
KRT2 MUTATED | 3 | 1 | 1 |
KRT2 WILD-TYPE | 113 | 78 | 86 |
P value = 0.317 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
KRT2 MUTATED | 2 | 0 | 1 |
KRT2 WILD-TYPE | 68 | 74 | 73 |
P value = 0.535 (Fisher's exact test), Q value = 0.97
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
KRT2 MUTATED | 1 | 1 | 1 |
KRT2 WILD-TYPE | 90 | 94 | 31 |
P value = 0.414 (Fisher's exact test), Q value = 0.87
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
ALMS1 MUTATED | 5 | 1 | 0 | 2 |
ALMS1 WILD-TYPE | 97 | 70 | 48 | 57 |
P value = 0.947 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
ALMS1 MUTATED | 2 | 2 | 2 | 1 | 0 | 1 |
ALMS1 WILD-TYPE | 54 | 40 | 56 | 57 | 26 | 26 |
P value = 0.896 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
ALMS1 MUTATED | 3 | 2 | 2 |
ALMS1 WILD-TYPE | 72 | 77 | 53 |
P value = 0.308 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
ALMS1 MUTATED | 0 | 1 | 4 | 2 |
ALMS1 WILD-TYPE | 39 | 64 | 59 | 40 |
P value = 0.946 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
ALMS1 MUTATED | 0 | 3 | 2 | 1 | 2 |
ALMS1 WILD-TYPE | 32 | 85 | 67 | 30 | 59 |
P value = 0.792 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
ALMS1 MUTATED | 3 | 3 | 2 |
ALMS1 WILD-TYPE | 111 | 118 | 44 |
P value = 0.893 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
ALMS1 MUTATED | 0 | 1 | 1 | 2 | 3 | 1 |
ALMS1 WILD-TYPE | 29 | 36 | 63 | 38 | 77 | 31 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
ALMS1 MUTATED | 3 | 2 | 3 |
ALMS1 WILD-TYPE | 113 | 77 | 84 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
ALMS1 MUTATED | 2 | 3 | 2 |
ALMS1 WILD-TYPE | 68 | 71 | 72 |
P value = 0.681 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
ALMS1 MUTATED | 4 | 2 | 1 |
ALMS1 WILD-TYPE | 87 | 93 | 31 |
P value = 0.274 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
GXYLT1 MUTATED | 0 | 2 | 1 | 1 |
GXYLT1 WILD-TYPE | 102 | 69 | 47 | 58 |
P value = 0.671 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
GXYLT1 MUTATED | 0 | 1 | 1 | 1 | 1 | 0 |
GXYLT1 WILD-TYPE | 56 | 41 | 57 | 57 | 25 | 27 |
P value = 0.482 (Fisher's exact test), Q value = 0.93
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
GXYLT1 MUTATED | 0 | 2 | 1 |
GXYLT1 WILD-TYPE | 75 | 77 | 54 |
P value = 0.468 (Fisher's exact test), Q value = 0.92
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
GXYLT1 MUTATED | 0 | 2 | 0 | 1 |
GXYLT1 WILD-TYPE | 39 | 63 | 63 | 41 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
GXYLT1 MUTATED | 0 | 2 | 1 | 0 | 1 |
GXYLT1 WILD-TYPE | 32 | 86 | 68 | 31 | 60 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
GXYLT1 MUTATED | 2 | 2 | 0 |
GXYLT1 WILD-TYPE | 112 | 119 | 46 |
P value = 0.168 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
GXYLT1 MUTATED | 0 | 1 | 3 | 0 | 0 | 0 |
GXYLT1 WILD-TYPE | 29 | 36 | 61 | 40 | 80 | 32 |
P value = 0.689 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
GXYLT1 MUTATED | 1 | 2 | 1 |
GXYLT1 WILD-TYPE | 115 | 77 | 86 |
P value = 0.542 (Fisher's exact test), Q value = 0.97
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
GXYLT1 MUTATED | 1 | 2 | 0 |
GXYLT1 WILD-TYPE | 69 | 72 | 74 |
P value = 0.0293 (Fisher's exact test), Q value = 0.36
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
GXYLT1 MUTATED | 1 | 0 | 2 |
GXYLT1 WILD-TYPE | 90 | 95 | 30 |
P value = 0.16 (Fisher's exact test), Q value = 0.65
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
ATP1B1 MUTATED | 3 | 0 | 3 | 1 |
ATP1B1 WILD-TYPE | 99 | 71 | 45 | 58 |
P value = 0.606 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
ATP1B1 MUTATED | 2 | 1 | 0 | 1 | 1 | 1 |
ATP1B1 WILD-TYPE | 54 | 41 | 58 | 57 | 25 | 26 |
P value = 0.852 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
ATP1B1 MUTATED | 1 | 2 | 2 |
ATP1B1 WILD-TYPE | 74 | 77 | 53 |
P value = 0.608 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
ATP1B1 MUTATED | 0 | 1 | 2 | 2 |
ATP1B1 WILD-TYPE | 39 | 64 | 61 | 40 |
P value = 0.0541 (Fisher's exact test), Q value = 0.45
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
ATP1B1 MUTATED | 0 | 0 | 4 | 0 | 3 |
ATP1B1 WILD-TYPE | 32 | 88 | 65 | 31 | 58 |
P value = 0.182 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
ATP1B1 MUTATED | 5 | 1 | 1 |
ATP1B1 WILD-TYPE | 109 | 120 | 45 |
P value = 0.202 (Fisher's exact test), Q value = 0.71
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
ATP1B1 MUTATED | 1 | 1 | 0 | 3 | 2 | 0 |
ATP1B1 WILD-TYPE | 28 | 36 | 64 | 37 | 78 | 32 |
P value = 0.722 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
ATP1B1 MUTATED | 4 | 1 | 2 |
ATP1B1 WILD-TYPE | 112 | 78 | 85 |
P value = 0.0469 (Fisher's exact test), Q value = 0.42
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
ATP1B1 MUTATED | 4 | 0 | 1 |
ATP1B1 WILD-TYPE | 66 | 74 | 73 |
P value = 0.851 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
ATP1B1 MUTATED | 2 | 3 | 0 |
ATP1B1 WILD-TYPE | 89 | 92 | 32 |
P value = 0.838 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
PBRM1 MUTATED | 5 | 2 | 1 | 3 |
PBRM1 WILD-TYPE | 97 | 69 | 47 | 56 |
P value = 0.00227 (Fisher's exact test), Q value = 0.084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
PBRM1 MUTATED | 0 | 3 | 2 | 1 | 5 | 0 |
PBRM1 WILD-TYPE | 56 | 39 | 56 | 57 | 21 | 27 |
P value = 0.223 (Fisher's exact test), Q value = 0.75
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
PBRM1 MUTATED | 3 | 2 | 5 |
PBRM1 WILD-TYPE | 72 | 77 | 50 |
P value = 0.17 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
PBRM1 MUTATED | 1 | 2 | 2 | 5 |
PBRM1 WILD-TYPE | 38 | 63 | 61 | 37 |
P value = 0.0797 (Fisher's exact test), Q value = 0.48
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
PBRM1 MUTATED | 1 | 2 | 7 | 0 | 1 |
PBRM1 WILD-TYPE | 31 | 86 | 62 | 31 | 60 |
P value = 0.0732 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
PBRM1 MUTATED | 8 | 3 | 0 |
PBRM1 WILD-TYPE | 106 | 118 | 46 |
P value = 0.041 (Fisher's exact test), Q value = 0.4
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
PBRM1 MUTATED | 1 | 3 | 2 | 4 | 0 | 1 |
PBRM1 WILD-TYPE | 28 | 34 | 62 | 36 | 80 | 31 |
P value = 0.00186 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
PBRM1 MUTATED | 10 | 1 | 0 |
PBRM1 WILD-TYPE | 106 | 78 | 87 |
P value = 0.365 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
PBRM1 MUTATED | 4 | 1 | 3 |
PBRM1 WILD-TYPE | 66 | 73 | 71 |
P value = 0.38 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
PBRM1 MUTATED | 5 | 3 | 0 |
PBRM1 WILD-TYPE | 86 | 92 | 32 |
P value = 0.889 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
PTEN MUTATED | 2 | 1 | 1 | 2 |
PTEN WILD-TYPE | 100 | 70 | 47 | 57 |
P value = 0.183 (Fisher's exact test), Q value = 0.66
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
PTEN MUTATED | 0 | 2 | 1 | 4 | 0 | 0 |
PTEN WILD-TYPE | 56 | 40 | 57 | 54 | 26 | 27 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
PTEN MUTATED | 2 | 3 | 2 |
PTEN WILD-TYPE | 73 | 76 | 53 |
P value = 0.744 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
PTEN MUTATED | 2 | 2 | 1 | 2 |
PTEN WILD-TYPE | 37 | 63 | 62 | 40 |
P value = 0.336 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
PTEN MUTATED | 1 | 1 | 3 | 1 | 0 |
PTEN WILD-TYPE | 31 | 87 | 66 | 30 | 61 |
P value = 0.405 (Fisher's exact test), Q value = 0.86
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
PTEN MUTATED | 1 | 4 | 1 |
PTEN WILD-TYPE | 113 | 117 | 45 |
P value = 0.265 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
PTEN MUTATED | 1 | 3 | 1 | 0 | 2 | 0 |
PTEN WILD-TYPE | 28 | 34 | 63 | 40 | 78 | 32 |
P value = 0.495 (Fisher's exact test), Q value = 0.93
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
PTEN MUTATED | 3 | 3 | 1 |
PTEN WILD-TYPE | 113 | 76 | 86 |
P value = 0.869 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
PTEN MUTATED | 2 | 2 | 1 |
PTEN WILD-TYPE | 68 | 72 | 73 |
P value = 0.104 (Fisher's exact test), Q value = 0.55
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
PTEN MUTATED | 4 | 0 | 1 |
PTEN WILD-TYPE | 87 | 95 | 31 |
P value = 0.0387 (Fisher's exact test), Q value = 0.39
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
SAV1 MUTATED | 1 | 0 | 1 | 4 |
SAV1 WILD-TYPE | 101 | 71 | 47 | 55 |
P value = 0.00584 (Fisher's exact test), Q value = 0.14
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
SAV1 MUTATED | 1 | 0 | 0 | 0 | 1 | 3 |
SAV1 WILD-TYPE | 55 | 42 | 58 | 58 | 25 | 24 |
P value = 0.376 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
SAV1 MUTATED | 3 | 1 | 0 |
SAV1 WILD-TYPE | 72 | 78 | 55 |
P value = 0.384 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
SAV1 MUTATED | 0 | 1 | 3 | 0 |
SAV1 WILD-TYPE | 39 | 64 | 60 | 42 |
P value = 0.00029 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
SAV1 MUTATED | 0 | 0 | 0 | 0 | 6 |
SAV1 WILD-TYPE | 32 | 88 | 69 | 31 | 55 |
P value = 0.00019 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
SAV1 MUTATED | 1 | 0 | 5 |
SAV1 WILD-TYPE | 113 | 121 | 41 |
P value = 0.296 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
SAV1 MUTATED | 0 | 1 | 1 | 3 | 1 | 0 |
SAV1 WILD-TYPE | 29 | 36 | 63 | 37 | 79 | 32 |
P value = 0.157 (Fisher's exact test), Q value = 0.65
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
SAV1 MUTATED | 1 | 4 | 1 |
SAV1 WILD-TYPE | 115 | 75 | 86 |
P value = 0.329 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
SAV1 MUTATED | 0 | 3 | 1 |
SAV1 WILD-TYPE | 70 | 71 | 73 |
P value = 0.388 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
SAV1 MUTATED | 3 | 1 | 0 |
SAV1 WILD-TYPE | 88 | 94 | 32 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
CALCR MUTATED | 1 | 1 | 0 | 1 |
CALCR WILD-TYPE | 101 | 70 | 48 | 58 |
P value = 0.745 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
CALCR MUTATED | 1 | 0 | 2 | 0 | 0 | 0 |
CALCR WILD-TYPE | 55 | 42 | 56 | 58 | 26 | 27 |
P value = 0.631 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
CALCR MUTATED | 2 | 1 | 0 |
CALCR WILD-TYPE | 73 | 78 | 55 |
P value = 0.884 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
CALCR MUTATED | 1 | 1 | 1 | 0 |
CALCR WILD-TYPE | 38 | 64 | 62 | 42 |
P value = 0.283 (Fisher's exact test), Q value = 0.82
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
CALCR MUTATED | 0 | 2 | 0 | 1 | 0 |
CALCR WILD-TYPE | 32 | 86 | 69 | 30 | 61 |
P value = 0.0711 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
CALCR MUTATED | 0 | 1 | 2 |
CALCR WILD-TYPE | 114 | 120 | 44 |
P value = 0.712 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
CALCR MUTATED | 0 | 0 | 0 | 1 | 2 | 0 |
CALCR WILD-TYPE | 29 | 37 | 64 | 39 | 78 | 32 |
P value = 0.488 (Fisher's exact test), Q value = 0.93
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
CALCR MUTATED | 1 | 0 | 2 |
CALCR WILD-TYPE | 115 | 79 | 85 |
P value = 0.777 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
CALCR MUTATED | 0 | 1 | 2 |
CALCR WILD-TYPE | 70 | 73 | 72 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
CALCR MUTATED | 1 | 2 | 0 |
CALCR WILD-TYPE | 90 | 93 | 32 |
P value = 0.542 (Fisher's exact test), Q value = 0.97
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 102 | 71 | 48 | 59 |
IGSF3 MUTATED | 3 | 1 | 0 | 0 |
IGSF3 WILD-TYPE | 99 | 70 | 48 | 59 |
P value = 0.604 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 56 | 42 | 58 | 58 | 26 | 27 |
IGSF3 MUTATED | 1 | 2 | 1 | 0 | 0 | 0 |
IGSF3 WILD-TYPE | 55 | 40 | 57 | 58 | 26 | 27 |
P value = 0.0922 (Fisher's exact test), Q value = 0.51
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 75 | 79 | 55 |
IGSF3 MUTATED | 0 | 1 | 3 |
IGSF3 WILD-TYPE | 75 | 78 | 52 |
P value = 0.074 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 39 | 65 | 63 | 42 |
IGSF3 MUTATED | 0 | 1 | 0 | 3 |
IGSF3 WILD-TYPE | 39 | 64 | 63 | 39 |
P value = 0.373 (Fisher's exact test), Q value = 0.85
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 32 | 88 | 69 | 31 | 61 |
IGSF3 MUTATED | 0 | 1 | 3 | 0 | 0 |
IGSF3 WILD-TYPE | 32 | 87 | 66 | 31 | 61 |
P value = 0.395 (Fisher's exact test), Q value = 0.86
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 114 | 121 | 46 |
IGSF3 MUTATED | 3 | 1 | 0 |
IGSF3 WILD-TYPE | 111 | 120 | 46 |
P value = 0.969 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 29 | 37 | 64 | 40 | 80 | 32 |
IGSF3 MUTATED | 0 | 1 | 1 | 1 | 1 | 0 |
IGSF3 WILD-TYPE | 29 | 36 | 63 | 39 | 79 | 32 |
P value = 0.0683 (Fisher's exact test), Q value = 0.46
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 116 | 79 | 87 |
IGSF3 MUTATED | 4 | 0 | 0 |
IGSF3 WILD-TYPE | 112 | 79 | 87 |
P value = 0.0323 (Fisher's exact test), Q value = 0.37
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 74 | 74 |
IGSF3 MUTATED | 3 | 0 | 0 |
IGSF3 WILD-TYPE | 67 | 74 | 74 |
P value = 1 (Fisher's exact test), Q value = 1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 91 | 95 | 32 |
IGSF3 MUTATED | 1 | 2 | 0 |
IGSF3 WILD-TYPE | 90 | 93 | 32 |
-
Mutation data file = sample_sig_gene_table.txt from Mutsig_2CV pipeline
-
Processed Mutation data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/KIRP-TP/22574639/transformed.cor.cli.txt
-
Molecular subtypes file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/KIRP-TP/22542911/KIRP-TP.transferedmergedcluster.txt
-
Number of patients = 282
-
Number of significantly mutated genes = 26
-
Number of Molecular subtypes = 10
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.