GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_CITRATE_CYCLE_TCA_CYCLE 29 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CITRATE_CYCLE_TCA_CYCLE 0.51389 1.7053 0.02905 0.43727 0.752 0.0345 0.000383 0.0345 0.16667 0.115 KEGG_N_GLYCAN_BIOSYNTHESIS 46 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_N_GLYCAN_BIOSYNTHESIS 0.48735 1.6222 0.03086 0.54573 0.899 0.457 0.293 0.324 0.25944 0.154 KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 133 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_UBIQUITIN_MEDIATED_PROTEOLYSIS 0.30522 1.7876 0.001942 0.70886 0.555 0.444 0.295 0.315 0.17228 0.161 PID_ECADHERIN_NASCENTAJ_PATHWAY 39 http://www.broadinstitute.org/gsea/msigdb/cards/PID_ECADHERIN_NASCENTAJ_PATHWAY 0.38428 1.6141 0.03175 0.53514 0.904 0.333 0.24 0.254 0.26519 0.155 PID_LIS1PATHWAY 28 http://www.broadinstitute.org/gsea/msigdb/cards/PID_LIS1PATHWAY 0.57756 1.7642 0.006342 0.42592 0.619 0.214 0.0871 0.196 0.1205 0.103 REACTOME_METABOLISM_OF_NON_CODING_RNA 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_NON_CODING_RNA 0.49605 1.7822 0.04217 0.55373 0.569 0.681 0.366 0.433 0.13723 0.137 REACTOME_TRANSCRIPTIONAL_ACTIVITY_OF_SMAD2_SMAD3_SMAD4_HETEROTRIMER 36 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSCRIPTIONAL_ACTIVITY_OF_SMAD2_SMAD3_SMAD4_HETEROTRIMER 0.55443 1.6278 0.01597 0.56769 0.893 0.5 0.251 0.375 0.27154 0.161 REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM 44 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM 0.52783 1.8645 0.004024 0.55246 0.364 0.614 0.329 0.412 0 0.116 REACTOME_RNA_POL_II_TRANSCRIPTION 93 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RNA_POL_II_TRANSCRIPTION 0.33614 1.5778 0.06551 0.60272 0.94 0.376 0.318 0.258 0.32996 0.178 REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES 59 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES 0.4108 1.5558 0.0888 0.61891 0.953 0.322 0.219 0.252 0.36755 0.182 REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES 52 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES 0.43539 1.5894 0.07663 0.59391 0.93 0.327 0.219 0.256 0.31458 0.175 REACTOME_MRNA_PROCESSING 145 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MRNA_PROCESSING 0.36291 1.6608 0.06719 0.54312 0.84 0.476 0.329 0.322 0.22524 0.148 REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS 26 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ASSOCIATION_OF_TRIC_CCT_WITH_TARGET_PROTEINS_DURING_BIOSYNTHESIS 0.36058 1.5164 0.04427 0.71716 0.972 0.577 0.305 0.401 0.45789 0.224 REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT 33 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT 0.54971 1.7674 0.02534 0.49657 0.611 0.667 0.329 0.448 0.13488 0.116 REACTOME_MRNA_3_END_PROCESSING 25 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MRNA_3_END_PROCESSING 0.44797 1.5398 0.03564 0.64953 0.965 1 0.553 0.448 0.39578 0.196 REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY 0.59319 1.7527 0.007968 0.34633 0.648 0.778 0.347 0.509 0.10893 0.084 REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS 0.59232 1.7538 0.009842 0.39253 0.647 0.704 0.329 0.473 0.12185 0.095 REACTOME_HIV_LIFE_CYCLE 114 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_HIV_LIFE_CYCLE 0.3124 1.6425 0.05421 0.56176 0.87 0.439 0.33 0.296 0.25064 0.153 REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE 101 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE 0.40121 1.9285 0.0189 0.62461 0.234 0.465 0.33 0.314 0 0.127 REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX 60 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX 0.42284 1.5662 0.03968 0.61274 0.952 0.433 0.251 0.325 0.34985 0.179