GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_OXIDATIVE_PHOSPHORYLATION 114 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_OXIDATIVE_PHOSPHORYLATION 0.5172 1.6297 0.03602 0.21363 0.879 0.64 0.279 0.465 0.10969 0.031 KEGG_PYRIMIDINE_METABOLISM 98 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PYRIMIDINE_METABOLISM 0.38381 1.6848 0.01302 0.18453 0.781 0.439 0.268 0.323 0.077682 0.034 KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 33 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM 0.63333 1.513 0.04697 0.21854 0.979 0.515 0.197 0.414 0.14191 0.017 KEGG_RIBOSOME 86 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_RIBOSOME 0.64136 1.5447 0.09808 0.20933 0.96 0.849 0.322 0.578 0.13431 0.019 KEGG_DNA_REPLICATION 36 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_DNA_REPLICATION 0.60316 1.842 0.02213 0.46776 0.406 0.5 0.216 0.393 0 0.1 KEGG_PROTEASOME 43 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PROTEASOME 0.56456 1.7304 0.03607 0.27708 0.684 0.744 0.371 0.469 0.096057 0.069 KEGG_BASE_EXCISION_REPAIR 33 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_BASE_EXCISION_REPAIR 0.51936 1.7085 0.04536 0.18556 0.728 0.697 0.351 0.453 0.073359 0.034 KEGG_HOMOLOGOUS_RECOMBINATION 26 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HOMOLOGOUS_RECOMBINATION 0.64363 1.5089 0.07392 0.21079 0.98 0.577 0.216 0.453 0.13734 0.014 KEGG_CELL_CYCLE 118 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CELL_CYCLE 0.51154 1.5783 0.06337 0.20874 0.934 0.263 0.132 0.23 0.12384 0.023 KEGG_PARKINSONS_DISEASE 111 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_PARKINSONS_DISEASE 0.42235 1.4689 0.1192 0.22689 0.985 0.631 0.285 0.454 0.15922 0.012 KEGG_HUNTINGTONS_DISEASE 167 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_HUNTINGTONS_DISEASE 0.34708 1.5596 0.06067 0.20562 0.952 0.515 0.285 0.372 0.12727 0.021 PID_AURORA_B_PATHWAY 39 http://www.broadinstitute.org/gsea/msigdb/cards/PID_AURORA_B_PATHWAY 0.66865 1.4573 0.09 0.23478 0.986 0.41 0.0832 0.377 0.16616 0.012 PID_E2F_PATHWAY 69 http://www.broadinstitute.org/gsea/msigdb/cards/PID_E2F_PATHWAY 0.50293 1.4564 0.1118 0.22865 0.987 0.203 0.0504 0.193 0.16254 0.009 PID_ATR_PATHWAY 39 http://www.broadinstitute.org/gsea/msigdb/cards/PID_ATR_PATHWAY 0.63582 1.6129 0.02851 0.21129 0.901 0.333 0.128 0.291 0.11263 0.028 PID_AURORA_A_PATHWAY 31 http://www.broadinstitute.org/gsea/msigdb/cards/PID_AURORA_A_PATHWAY 0.59924 1.5352 0.07692 0.20262 0.967 0.226 0.0241 0.221 0.12844 0.015 REACTOME_TRANSLATION 147 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRANSLATION 0.49758 1.5303 0.1726 0.20448 0.97 0.66 0.324 0.449 0.12838 0.016 REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX 0.57871 1.5118 0.1132 0.21518 0.979 0.755 0.335 0.504 0.14077 0.015 REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT 115 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT 0.4666 1.719 0.06148 0.24024 0.708 0.617 0.286 0.443 0.091237 0.061 REACTOME_MEIOSIS 95 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MEIOSIS 0.62047 1.4973 0.07646 0.2053 0.981 0.474 0.15 0.405 0.13663 0.01 REACTOME_CELL_CYCLE 375 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CELL_CYCLE 0.52326 1.6641 0.05274 0.19298 0.822 0.357 0.193 0.294 0.085106 0.031 REACTOME_ORC1_REMOVAL_FROM_CHROMATIN 58 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ORC1_REMOVAL_FROM_CHROMATIN 0.48797 1.7551 0.03742 0.30746 0.626 0.69 0.371 0.435 0.092728 0.077 REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE 110 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE 0.55815 1.5391 0.1376 0.20722 0.966 0.745 0.322 0.509 0.13305 0.017 REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT 0.60247 1.7779 0.01807 0.3906 0.571 0.714 0.312 0.493 0.099895 0.093 REACTOME_SIGNALLING_TO_RAS 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SIGNALLING_TO_RAS 0.42433 1.4603 0.08658 0.23457 0.986 0.185 0.126 0.162 0.16351 0.012 REACTOME_SIGNALLING_TO_ERKS 36 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SIGNALLING_TO_ERKS 0.3901 1.4569 0.08584 0.23156 0.987 0.167 0.126 0.146 0.1637 0.01 REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT 0.48491 1.5112 0.109 0.21169 0.979 0.723 0.371 0.456 0.13848 0.015 REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6 45 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6 0.51772 1.568 0.07741 0.20547 0.944 0.711 0.371 0.448 0.12471 0.021 REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S 57 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S 0.55745 1.5422 0.1077 0.20766 0.964 0.702 0.335 0.468 0.13316 0.018 REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC 0.46706 1.4373 0.1636 0.23978 0.991 0.681 0.371 0.429 0.17494 0.009 REACTOME_CELL_CYCLE_MITOTIC 296 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CELL_CYCLE_MITOTIC 0.50006 1.5488 0.1071 0.20915 0.956 0.311 0.193 0.255 0.1318 0.019 REACTOME_CELL_CYCLE_CHECKPOINTS 104 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CELL_CYCLE_CHECKPOINTS 0.54944 1.7491 0.03644 0.2754 0.643 0.529 0.286 0.38 0.090032 0.07 REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_ 62 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_ 0.48335 1.6944 0.04034 0.1943 0.758 0.484 0.286 0.346 0.078431 0.038 REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE 52 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE 0.46001 1.5847 0.09032 0.21286 0.928 0.654 0.371 0.412 0.12006 0.025 REACTOME_M_G1_TRANSITION 71 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_M_G1_TRANSITION 0.54821 1.7622 0.03024 0.35137 0.61 0.535 0.295 0.379 0.10284 0.085 REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION 106 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION 0.55832 1.5015 0.1496 0.2119 0.98 0.755 0.324 0.513 0.1388 0.015 REACTOME_G1_S_TRANSITION 100 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_G1_S_TRANSITION 0.53575 1.6594 0.03992 0.1895 0.829 0.5 0.291 0.356 0.085509 0.028 REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX 0.51995 1.6053 0.05696 0.20692 0.904 0.723 0.371 0.456 0.11454 0.026 REACTOME_SYNTHESIS_OF_DNA 83 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SYNTHESIS_OF_DNA 0.55191 1.8723 0.01012 0.72223 0.324 0.554 0.291 0.395 0 0.147 REACTOME_METABOLISM_OF_MRNA 208 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_MRNA 0.38846 1.4436 0.2232 0.23493 0.989 0.567 0.326 0.387 0.17032 0.008 REACTOME_METABOLISM_OF_RNA 252 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_METABOLISM_OF_RNA 0.3636 1.4816 0.1816 0.21739 0.983 0.536 0.326 0.366 0.15012 0.011 REACTOME_MITOTIC_G1_G1_S_PHASES 124 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOTIC_G1_G1_S_PHASES 0.49006 1.5774 0.07307 0.19778 0.935 0.403 0.25 0.305 0.11787 0.02 REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE 76 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE 0.56345 1.7195 0.04098 0.26581 0.706 0.5 0.286 0.358 0.10121 0.067 REACTOME_MITOTIC_M_M_G1_PHASES 160 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOTIC_M_M_G1_PHASES 0.56217 1.5587 0.1008 0.20133 0.952 0.212 0.0817 0.197 0.12456 0.019 REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION 107 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION 0.55612 1.4346 0.126 0.23625 0.992 0.421 0.183 0.346 0.17451 0.008 REACTOME_MITOTIC_G2_G2_M_PHASES 74 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOTIC_G2_G2_M_PHASES 0.42497 1.4263 0.1684 0.24375 0.995 0.135 0.0673 0.127 0.18239 0.008 REACTOME_CHROMOSOME_MAINTENANCE 106 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CHROMOSOME_MAINTENANCE 0.61042 1.617 0.04277 0.2132 0.895 0.519 0.182 0.427 0.11288 0.028 REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE 53 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE 0.71822 1.499 0.07302 0.21105 0.98 0.642 0.15 0.547 0.14112 0.014 REACTOME_RNA_POL_I_PROMOTER_OPENING 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RNA_POL_I_PROMOTER_OPENING 0.76019 1.4453 0.07525 0.23627 0.988 0.673 0.15 0.574 0.17062 0.009 REACTOME_RESPIRATORY_ELECTRON_TRANSPORT 64 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RESPIRATORY_ELECTRON_TRANSPORT 0.63685 1.5142 0.06707 0.22138 0.978 0.75 0.275 0.546 0.14173 0.018 REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX 56 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX 0.53468 1.717 0.04375 0.20321 0.712 0.732 0.371 0.462 0.079169 0.044 REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0 49 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0 0.5061 1.5839 0.09054 0.20719 0.928 0.714 0.373 0.449 0.11753 0.022 REACTOME_MEIOTIC_RECOMBINATION 69 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MEIOTIC_RECOMBINATION 0.69635 1.499 0.068 0.20715 0.98 0.58 0.15 0.495 0.13851 0.01 REACTOME_DNA_REPLICATION 180 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DNA_REPLICATION 0.57015 1.6092 0.07 0.20863 0.902 0.428 0.229 0.333 0.11392 0.028 REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_E2F_MEDIATED_REGULATION_OF_DNA_REPLICATION 0.72178 1.6279 0.0224 0.20672 0.883 0.407 0.097 0.368 0.10654 0.028 REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER 26 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER 0.36629 1.4364 0.09692 0.23737 0.991 0.462 0.305 0.321 0.17385 0.008 REACTOME_INFLUENZA_LIFE_CYCLE 136 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_INFLUENZA_LIFE_CYCLE 0.4606 1.4762 0.1843 0.22093 0.984 0.654 0.322 0.447 0.15527 0.012 REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION 102 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION 0.54576 1.4486 0.2081 0.23558 0.987 0.784 0.322 0.535 0.17018 0.009 REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_ 79 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_ 0.64881 1.6397 0.01449 0.20838 0.865 0.772 0.285 0.555 0.099424 0.03 REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1 63 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1 0.55317 1.6764 0.04742 0.18582 0.794 0.524 0.286 0.375 0.079365 0.034 REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS 29 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS 0.65293 1.5386 0.07187 0.20301 0.966 0.517 0.197 0.416 0.12996 0.015 REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS 64 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS 0.56128 1.7128 0.02905 0.19405 0.721 0.531 0.286 0.38 0.077025 0.04 REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C 56 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C 0.48559 1.6044 0.05957 0.20046 0.907 0.696 0.371 0.439 0.11161 0.024 REACTOME_MITOTIC_PROMETAPHASE 85 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_MITOTIC_PROMETAPHASE 0.62129 1.4906 0.1145 0.21 0.982 0.271 0.0817 0.25 0.14202 0.011 REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1 48 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1 0.50493 1.5867 0.06105 0.2174 0.927 0.667 0.371 0.42 0.12402 0.026 REACTOME_TELOMERE_MAINTENANCE 67 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TELOMERE_MAINTENANCE 0.68268 1.5777 0.04024 0.20323 0.934 0.672 0.216 0.528 0.12103 0.021 REACTOME_EXTENSION_OF_TELOMERES 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_EXTENSION_OF_TELOMERES 0.64664 1.719 0.025 0.21847 0.709 0.63 0.216 0.494 0.082942 0.054 REACTOME_G2_M_CHECKPOINTS 35 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_G2_M_CHECKPOINTS 0.63977 1.5045 0.09457 0.21195 0.98 0.543 0.197 0.437 0.13963 0.015 REACTOME_S_PHASE 99 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_S_PHASE 0.53168 1.8319 0.02028 0.33666 0.429 0.525 0.291 0.374 0 0.071 REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21 53 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21 0.49107 1.6899 0.03934 0.18907 0.768 0.509 0.286 0.365 0.078211 0.038 REACTOME_DNA_STRAND_ELONGATION 30 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_DNA_STRAND_ELONGATION 0.61797 1.5645 0.07157 0.20416 0.947 0.533 0.216 0.419 0.12583 0.021