GS SIZE SOURCE ES NES NOM p-val FDR q-val FWER p-val Tag % Gene % Signal FDR (median) glob.p.val KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 43 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY 0.63621 1.5096 0.08893 1 0.958 0.465 0.211 0.368 1 0.78 KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY 108 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY 0.50806 1.4105 0.171 1 0.991 0.315 0.111 0.281 1 0.566 KEGG_AUTOIMMUNE_THYROID_DISEASE 37 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_AUTOIMMUNE_THYROID_DISEASE 0.71046 1.4024 0.1429 1 0.993 0.811 0.205 0.646 1 0.563 KEGG_ALLOGRAFT_REJECTION 35 http://www.broadinstitute.org/gsea/msigdb/cards/KEGG_ALLOGRAFT_REJECTION 0.73005 1.3455 0.1827 1 0.997 0.771 0.189 0.627 1 0.598 ST_T_CELL_SIGNAL_TRANSDUCTION 44 http://www.broadinstitute.org/gsea/msigdb/cards/ST_T_CELL_SIGNAL_TRANSDUCTION 0.55784 1.4464 0.1319 1 0.983 0.364 0.102 0.327 1 0.719 PID_ATM_PATHWAY 34 http://www.broadinstitute.org/gsea/msigdb/cards/PID_ATM_PATHWAY 0.39704 1.354 0.1834 1 0.997 0.647 0.379 0.402 1 0.6 PID_PI3KCIPATHWAY 49 http://www.broadinstitute.org/gsea/msigdb/cards/PID_PI3KCIPATHWAY 0.51583 1.3998 0.2004 1 0.993 0.388 0.218 0.304 1 0.532 PID_IFNGPATHWAY 40 http://www.broadinstitute.org/gsea/msigdb/cards/PID_IFNGPATHWAY 0.42813 1.4561 0.1303 1 0.982 0.3 0.192 0.243 1 0.739 PID_IL23PATHWAY 36 http://www.broadinstitute.org/gsea/msigdb/cards/PID_IL23PATHWAY 0.6683 1.4456 0.09534 1 0.983 0.5 0.145 0.428 1 0.677 PID_IL8CXCR2_PATHWAY 34 http://www.broadinstitute.org/gsea/msigdb/cards/PID_IL8CXCR2_PATHWAY 0.53221 1.4161 0.1426 1 0.989 0.324 0.125 0.284 1 0.603 REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS 29 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS 0.61239 1.4443 0.1533 1 0.983 0.517 0.228 0.4 1 0.638 REACTOME_TRIGLYCERIDE_BIOSYNTHESIS 38 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_TRIGLYCERIDE_BIOSYNTHESIS 0.39179 1.4308 0.07752 1 0.987 0.342 0.196 0.276 1 0.634 REACTOME_PI_METABOLISM 47 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_PI_METABOLISM 0.43061 1.3726 0.1543 1 0.994 0.426 0.29 0.303 1 0.573 REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC 25 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC 0.49435 1.4656 0.072 1 0.98 0.08 0.00383 0.0798 1 0.76 REACTOME_CD28_CO_STIMULATION 31 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_CD28_CO_STIMULATION 0.52593 1.4811 0.1229 1 0.973 0.226 0.0919 0.205 1 0.783 REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY 61 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY 0.61792 1.401 0.1723 1 0.993 0.41 0.172 0.341 1 0.544 REACTOME_IL_3_5_AND_GM_CSF_SIGNALING 43 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_IL_3_5_AND_GM_CSF_SIGNALING 0.6214 1.5385 0.062 1 0.942 0.442 0.141 0.38 1 0.803 REACTOME_IL_RECEPTOR_SHC_SIGNALING 27 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_IL_RECEPTOR_SHC_SIGNALING 0.67795 1.5641 0.04637 1 0.926 0.519 0.141 0.446 1 0.86 REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS 61 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS 0.42763 1.4193 0.17 1 0.989 0.344 0.239 0.263 1 0.626 REACTOME_IL_2_SIGNALING 41 http://www.broadinstitute.org/gsea/msigdb/cards/REACTOME_IL_2_SIGNALING 0.53924 1.4161 0.1469 1 0.989 0.61 0.289 0.435 1 0.579