This pipeline computes the correlation between significant arm-level copy number variations (cnvs) and molecular subtypes.
Testing the association between copy number variation 75 arm-level events and 10 molecular subtypes across 150 patients, 362 significant findings detected with P value < 0.05 and Q value < 0.25.
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1p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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1q gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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2p gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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2q gain cnv correlated to 'METHLYATION_CNMF'.
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3p gain cnv correlated to 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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5p gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5q gain cnv correlated to 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6p gain cnv correlated to 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6q gain cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7p gain cnv correlated to 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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7q gain cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8p gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11p gain cnv correlated to 'RPPA_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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11q gain cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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15q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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16p gain cnv correlated to 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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16q gain cnv correlated to 'RPPA_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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20p gain cnv correlated to 'CN_CNMF' and 'METHLYATION_CNMF'.
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20q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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22q gain cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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xp gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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xq gain cnv correlated to 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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1p loss cnv correlated to 'MIRSEQ_CNMF'.
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3p loss cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q loss cnv correlated to 'RPPA_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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4p loss cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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4q loss cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5p loss cnv correlated to 'CN_CNMF' and 'RPPA_CNMF'.
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5q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6p loss cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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6q loss cnv correlated to 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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8p loss cnv correlated to 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8q loss cnv correlated to 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9p loss cnv correlated to 'CN_CNMF'.
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9q loss cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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10p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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10q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11p loss cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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13q loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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14q loss cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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15q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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16p loss cnv correlated to 'METHLYATION_CNMF', 'MIRSEQ_CNMF', and 'MIRSEQ_CHIERARCHICAL'.
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16q loss cnv correlated to 'CN_CNMF' and 'MIRSEQ_CNMF'.
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17p loss cnv correlated to 'CN_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17q loss cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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18p loss cnv correlated to 'METHLYATION_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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18q loss cnv correlated to 'CN_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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20p loss cnv correlated to 'MIRSEQ_CNMF' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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22q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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xp loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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xq loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
1p gain | 37 (25%) | 113 |
0.014 (0.0401) |
0.00307 (0.0127) |
0.00022 (0.00162) |
0.00249 (0.0109) |
0.00189 (0.00909) |
0.00051 (0.00311) |
5e-05 (0.000463) |
1e-05 (0.000134) |
1e-05 (0.000134) |
0.00047 (0.00291) |
8q gain | 111 (74%) | 39 |
0.0115 (0.0346) |
0.00711 (0.0243) |
0.0128 (0.0376) |
0.00228 (0.0104) |
4e-05 (4e-04) |
0.00032 (0.00212) |
0.0002 (0.00153) |
8e-05 (0.00069) |
0.00028 (0.00193) |
0.00172 (0.00843) |
15q gain | 51 (34%) | 99 |
0.0323 (0.0742) |
0.0167 (0.0457) |
0.00191 (0.00912) |
0.00039 (0.00252) |
2e-05 (0.000234) |
4e-05 (4e-04) |
0.00011 (0.000907) |
2e-05 (0.000234) |
1e-05 (0.000134) |
1e-05 (0.000134) |
17p gain | 40 (27%) | 110 |
0.00111 (0.00595) |
1e-05 (0.000134) |
4e-05 (4e-04) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
2e-05 (0.000234) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
17q gain | 50 (33%) | 100 |
0.007 (0.0242) |
3e-05 (0.000326) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
2e-05 (0.000234) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
10p loss | 77 (51%) | 73 |
0.00247 (0.0109) |
0.0229 (0.0575) |
0.00819 (0.0266) |
0.00734 (0.025) |
0.031 (0.0718) |
0.00553 (0.0197) |
0.0421 (0.0916) |
0.00062 (0.00369) |
0.00194 (0.00915) |
0.00285 (0.0122) |
15q loss | 29 (19%) | 121 |
0.0176 (0.0474) |
0.00026 (0.00182) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
19p loss | 49 (33%) | 101 |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
19q loss | 53 (35%) | 97 |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
22q loss | 43 (29%) | 107 |
3e-05 (0.000326) |
5e-05 (0.000463) |
0.00166 (0.00824) |
3e-05 (0.000326) |
4e-05 (4e-04) |
4e-05 (4e-04) |
0.00014 (0.00113) |
1e-05 (0.000134) |
1e-05 (0.000134) |
1e-05 (0.000134) |
8p gain | 110 (73%) | 40 |
0.0587 (0.115) |
0.00081 (0.0046) |
0.00091 (0.00495) |
0.00011 (0.000907) |
2e-05 (0.000234) |
0.00021 (0.00156) |
0.00016 (0.00128) |
1e-05 (0.000134) |
2e-05 (0.000234) |
0.0001 (0.000852) |
19p gain | 37 (25%) | 113 |
0.00418 (0.016) |
0.0147 (0.0413) |
0.0133 (0.0388) |
0.00694 (0.0242) |
0.00217 (0.00992) |
0.00118 (0.00628) |
0.0657 (0.126) |
0.00014 (0.00113) |
0.00087 (0.00483) |
0.00092 (0.00496) |
19q gain | 29 (19%) | 121 |
5e-05 (0.000463) |
0.00153 (0.00786) |
0.00198 (0.00928) |
0.00248 (0.0109) |
0.00051 (0.00311) |
0.00056 (0.00336) |
0.134 (0.22) |
5e-05 (0.000463) |
0.00035 (0.0023) |
0.0002 (0.00153) |
xp gain | 22 (15%) | 128 |
0.0509 (0.105) |
0.0197 (0.0511) |
0.0383 (0.0847) |
0.00922 (0.0292) |
0.00355 (0.014) |
0.00308 (0.0127) |
0.00023 (0.00166) |
0.00018 (0.00142) |
0.00166 (0.00824) |
8e-05 (0.00069) |
3q gain | 35 (23%) | 115 |
0.117 (0.198) |
0.0101 (0.0315) |
0.00214 (0.00985) |
0.00332 (0.0133) |
0.00027 (0.00187) |
0.0138 (0.0398) |
0.0495 (0.103) |
0.0104 (0.0321) |
0.0194 (0.0509) |
0.0561 (0.111) |
20q gain | 41 (27%) | 109 |
0.0494 (0.103) |
0.00289 (0.0122) |
0.0422 (0.0916) |
0.0281 (0.0672) |
0.00512 (0.0189) |
0.0508 (0.105) |
0.0335 (0.0766) |
0.0124 (0.0366) |
0.0166 (0.0456) |
0.0641 (0.124) |
22q gain | 39 (26%) | 111 |
1e-05 (0.000134) |
0.0569 (0.112) |
0.0165 (0.0456) |
0.00444 (0.0167) |
2e-05 (0.000234) |
4e-05 (4e-04) |
0.0978 (0.171) |
5e-05 (0.000463) |
0.00024 (0.00171) |
5e-05 (0.000463) |
xq gain | 23 (15%) | 127 |
0.368 (0.465) |
0.0521 (0.106) |
0.0392 (0.0864) |
0.00755 (0.0254) |
0.0082 (0.0266) |
0.00257 (0.0111) |
0.00161 (0.0081) |
0.00032 (0.00212) |
0.00083 (0.00465) |
0.00045 (0.00286) |
3p loss | 31 (21%) | 119 |
0.0633 (0.122) |
0.00334 (0.0133) |
0.017 (0.0463) |
0.317 (0.415) |
0.002 (0.00932) |
0.00231 (0.0104) |
0.0008 (0.00458) |
0.00046 (0.0029) |
0.00186 (0.009) |
0.00045 (0.00286) |
5q loss | 101 (67%) | 49 |
6e-05 (0.000542) |
0.0224 (0.0568) |
0.0397 (0.087) |
0.261 (0.355) |
0.00277 (0.0119) |
0.00349 (0.0138) |
0.387 (0.482) |
0.0101 (0.0315) |
0.0201 (0.0519) |
0.0189 (0.0499) |
8p loss | 12 (8%) | 138 |
0.372 (0.466) |
0.0687 (0.131) |
0.0276 (0.0667) |
0.00923 (0.0292) |
0.0215 (0.055) |
0.0477 (0.1) |
0.00966 (0.0304) |
0.00193 (0.00915) |
0.00739 (0.0251) |
0.0163 (0.0452) |
10q loss | 71 (47%) | 79 |
0.00019 (0.00148) |
0.0115 (0.0346) |
0.0544 (0.109) |
0.0238 (0.0591) |
0.00438 (0.0166) |
0.00142 (0.00734) |
0.0677 (0.13) |
0.00029 (0.00196) |
0.00067 (0.00393) |
0.00023 (0.00166) |
14q loss | 20 (13%) | 130 |
0.1 (0.174) |
0.0241 (0.0596) |
0.0279 (0.0671) |
0.0921 (0.164) |
0.00459 (0.0171) |
3e-05 (0.000326) |
0.0367 (0.0826) |
0.00322 (0.0131) |
0.00238 (0.0107) |
0.00089 (0.00487) |
17p loss | 37 (25%) | 113 |
1e-05 (0.000134) |
0.177 (0.264) |
0.0447 (0.095) |
0.00313 (0.0128) |
0.00065 (0.00384) |
0.00021 (0.00156) |
0.0933 (0.166) |
0.00334 (0.0133) |
0.0016 (0.0081) |
1e-05 (0.000134) |
2p gain | 47 (31%) | 103 |
0.373 (0.467) |
0.0101 (0.0315) |
0.0699 (0.133) |
0.0374 (0.0834) |
0.0302 (0.071) |
0.0991 (0.172) |
0.0293 (0.0694) |
0.0131 (0.0381) |
0.0181 (0.0483) |
0.019 (0.0499) |
3p gain | 26 (17%) | 124 |
0.161 (0.246) |
0.0554 (0.11) |
0.00171 (0.00843) |
0.0134 (0.0388) |
6e-05 (0.000542) |
0.00307 (0.0127) |
0.0527 (0.107) |
0.00545 (0.0197) |
0.00602 (0.0213) |
0.0268 (0.0655) |
5p gain | 6 (4%) | 144 |
0.87 (0.906) |
0.0313 (0.0723) |
0.00901 (0.0289) |
0.15 (0.235) |
0.057 (0.112) |
0.00799 (0.0265) |
0.00415 (0.016) |
0.00697 (0.0242) |
0.00378 (0.0148) |
0.0229 (0.0575) |
7p gain | 121 (81%) | 29 |
0.0507 (0.105) |
0.15 (0.235) |
0.0155 (0.0434) |
0.0213 (0.0548) |
0.00076 (0.00438) |
0.00859 (0.0276) |
0.0116 (0.0348) |
0.00747 (0.0252) |
0.00706 (0.0243) |
0.0576 (0.113) |
7q gain | 104 (69%) | 46 |
0.142 (0.227) |
0.0452 (0.0956) |
0.184 (0.273) |
0.472 (0.567) |
3e-05 (0.000326) |
0.00813 (0.0266) |
0.0243 (0.06) |
0.0142 (0.0406) |
0.0124 (0.0365) |
0.00796 (0.0265) |
8q loss | 5 (3%) | 145 |
0.341 (0.437) |
0.192 (0.281) |
0.122 (0.204) |
0.0145 (0.0412) |
0.0116 (0.0348) |
0.0119 (0.0352) |
0.00158 (0.00806) |
0.00256 (0.0111) |
0.00247 (0.0109) |
0.00291 (0.0123) |
11q loss | 116 (77%) | 34 |
0.00288 (0.0122) |
0.105 (0.181) |
0.147 (0.231) |
0.0772 (0.143) |
7e-05 (0.000625) |
1e-05 (0.000134) |
8e-05 (0.00069) |
0.00011 (0.000907) |
0.00089 (0.00487) |
1e-05 (0.000134) |
6p gain | 28 (19%) | 122 |
0.371 (0.466) |
0.76 (0.82) |
0.428 (0.521) |
0.0417 (0.0913) |
0.0308 (0.0717) |
0.00082 (0.00462) |
0.0053 (0.0193) |
0.00648 (0.0227) |
0.0544 (0.109) |
0.0201 (0.0519) |
4q loss | 109 (73%) | 41 |
0.0688 (0.131) |
0.0568 (0.112) |
0.492 (0.585) |
0.564 (0.647) |
0.0293 (0.0694) |
0.00553 (0.0197) |
0.00174 (0.00847) |
0.00498 (0.0185) |
0.0298 (0.0704) |
0.00792 (0.0265) |
11p loss | 99 (66%) | 51 |
0.0813 (0.148) |
0.0441 (0.0942) |
0.0934 (0.166) |
0.204 (0.295) |
0.0921 (0.164) |
0.00038 (0.00248) |
0.00026 (0.00182) |
0.00029 (0.00196) |
0.00448 (0.0168) |
0.00546 (0.0197) |
13q loss | 113 (75%) | 37 |
0.0157 (0.0439) |
0.227 (0.321) |
0.0943 (0.167) |
0.052 (0.106) |
0.00047 (0.00291) |
0.0012 (0.00629) |
0.027 (0.0657) |
0.0232 (0.058) |
0.0978 (0.171) |
0.0007 (0.00407) |
xq loss | 28 (19%) | 122 |
2e-05 (0.000234) |
0.00139 (0.00724) |
0.0744 (0.139) |
0.802 (0.852) |
0.0227 (0.0574) |
0.145 (0.229) |
0.0235 (0.0587) |
0.0115 (0.0346) |
0.0975 (0.171) |
0.00518 (0.019) |
6q gain | 23 (15%) | 127 |
0.18 (0.268) |
0.407 (0.5) |
0.836 (0.877) |
0.217 (0.31) |
0.00636 (0.0224) |
0.00021 (0.00156) |
0.0021 (0.00972) |
0.00432 (0.0164) |
0.0512 (0.105) |
0.0216 (0.0552) |
16p gain | 17 (11%) | 133 |
0.1 (0.174) |
0.125 (0.208) |
0.0535 (0.108) |
0.00366 (0.0144) |
0.188 (0.276) |
0.0364 (0.0823) |
0.00391 (0.0152) |
0.0166 (0.0456) |
0.00838 (0.0271) |
0.0709 (0.134) |
16q gain | 15 (10%) | 135 |
0.102 (0.176) |
0.484 (0.576) |
0.0535 (0.108) |
0.00807 (0.0265) |
0.326 (0.425) |
0.0871 (0.157) |
0.0217 (0.0552) |
0.0383 (0.0847) |
0.0259 (0.0638) |
0.0424 (0.0916) |
4p loss | 94 (63%) | 56 |
0.23 (0.323) |
0.026 (0.0638) |
0.354 (0.45) |
0.666 (0.739) |
0.0426 (0.0919) |
0.0777 (0.143) |
0.0176 (0.0474) |
0.0445 (0.0948) |
0.0623 (0.121) |
0.0137 (0.0395) |
5q gain | 3 (2%) | 147 |
0.839 (0.879) |
0.222 (0.316) |
0.122 (0.204) |
0.0423 (0.0916) |
0.112 (0.191) |
0.0146 (0.0412) |
0.0119 (0.0352) |
0.0431 (0.0923) |
||
3q loss | 23 (15%) | 127 |
0.986 (1.00) |
0.238 (0.332) |
0.0471 (0.0993) |
0.152 (0.237) |
0.0808 (0.148) |
0.0351 (0.0797) |
0.0616 (0.12) |
0.0491 (0.103) |
0.0337 (0.0769) |
0.171 (0.258) |
18p loss | 118 (79%) | 32 |
0.268 (0.36) |
0.0487 (0.102) |
0.716 (0.78) |
1 (1.00) |
0.52 (0.607) |
0.233 (0.326) |
0.00587 (0.0209) |
0.0196 (0.0511) |
0.16 (0.246) |
0.0369 (0.0827) |
18q loss | 122 (81%) | 28 |
0.0293 (0.0694) |
0.153 (0.238) |
0.506 (0.597) |
0.875 (0.909) |
0.213 (0.306) |
0.123 (0.205) |
0.0175 (0.0473) |
0.0309 (0.0717) |
0.203 (0.294) |
0.00803 (0.0265) |
xp loss | 29 (19%) | 121 |
0.00316 (0.0129) |
0.0052 (0.019) |
0.763 (0.821) |
0.917 (0.942) |
0.0449 (0.0951) |
0.178 (0.265) |
0.0919 (0.164) |
0.0921 (0.164) |
0.0539 (0.108) |
0.0167 (0.0457) |
6q loss | 16 (11%) | 134 |
0.174 (0.262) |
0.122 (0.204) |
0.159 (0.245) |
0.0623 (0.121) |
0.0605 (0.118) |
0.00119 (0.00629) |
0.115 (0.195) |
0.0277 (0.0667) |
0.0355 (0.0805) |
0.19 (0.279) |
16p loss | 44 (29%) | 106 |
0.121 (0.203) |
0.0111 (0.034) |
0.29 (0.384) |
0.249 (0.344) |
0.233 (0.326) |
0.263 (0.355) |
0.00305 (0.0127) |
0.0113 (0.0343) |
0.0792 (0.146) |
0.139 (0.224) |
1q gain | 60 (40%) | 90 |
0.0368 (0.0826) |
0.19 (0.279) |
0.193 (0.282) |
0.389 (0.483) |
0.284 (0.378) |
0.0375 (0.0834) |
0.0742 (0.139) |
0.563 (0.647) |
0.225 (0.32) |
0.0762 (0.142) |
11p gain | 9 (6%) | 141 |
0.45 (0.545) |
0.578 (0.66) |
0.0499 (0.103) |
0.168 (0.256) |
0.0856 (0.155) |
0.0394 (0.0866) |
0.28 (0.374) |
0.29 (0.384) |
0.331 (0.428) |
0.208 (0.299) |
20p gain | 35 (23%) | 115 |
0.0182 (0.0484) |
0.0106 (0.0327) |
0.227 (0.321) |
0.136 (0.221) |
0.119 (0.2) |
0.327 (0.425) |
0.21 (0.301) |
0.142 (0.227) |
0.0737 (0.139) |
0.167 (0.255) |
5p loss | 103 (69%) | 47 |
0.0197 (0.0511) |
0.138 (0.223) |
0.0274 (0.0666) |
0.477 (0.572) |
0.116 (0.197) |
0.134 (0.22) |
0.518 (0.607) |
0.0841 (0.153) |
0.11 (0.189) |
0.158 (0.244) |
9q loss | 58 (39%) | 92 |
1e-05 (0.000134) |
0.227 (0.321) |
0.144 (0.228) |
0.175 (0.262) |
0.289 (0.384) |
0.0178 (0.0477) |
0.76 (0.82) |
0.396 (0.49) |
0.368 (0.465) |
0.266 (0.359) |
16q loss | 51 (34%) | 99 |
0.0186 (0.0494) |
0.0947 (0.167) |
0.658 (0.731) |
0.59 (0.667) |
0.714 (0.779) |
0.482 (0.575) |
0.0109 (0.0335) |
0.121 (0.203) |
0.33 (0.427) |
0.13 (0.214) |
17q loss | 19 (13%) | 131 |
0.00397 (0.0153) |
0.819 (0.864) |
0.765 (0.822) |
0.352 (0.448) |
0.142 (0.227) |
0.0281 (0.0672) |
0.338 (0.435) |
0.159 (0.245) |
0.142 (0.227) |
0.136 (0.221) |
20p loss | 29 (19%) | 121 |
0.382 (0.477) |
0.436 (0.53) |
0.415 (0.507) |
0.451 (0.545) |
0.208 (0.299) |
0.26 (0.354) |
0.0307 (0.0717) |
0.246 (0.341) |
0.182 (0.27) |
0.00912 (0.0291) |
2q gain | 42 (28%) | 108 |
0.807 (0.854) |
0.0319 (0.0735) |
0.928 (0.951) |
0.253 (0.349) |
0.128 (0.212) |
0.75 (0.811) |
0.595 (0.67) |
0.399 (0.492) |
0.348 (0.445) |
0.611 (0.685) |
11q gain | 3 (2%) | 147 |
0.144 (0.229) |
0.581 (0.661) |
0.135 (0.22) |
0.315 (0.413) |
0.231 (0.323) |
0.0308 (0.0717) |
0.281 (0.374) |
0.149 (0.234) |
0.156 (0.242) |
0.171 (0.259) |
1p loss | 20 (13%) | 130 |
0.0708 (0.134) |
0.473 (0.567) |
0.339 (0.435) |
0.263 (0.355) |
0.263 (0.355) |
0.871 (0.906) |
0.0428 (0.0919) |
0.203 (0.294) |
0.0717 (0.135) |
0.689 (0.76) |
6p loss | 13 (9%) | 137 |
0.239 (0.333) |
0.0959 (0.169) |
0.31 (0.407) |
0.0815 (0.148) |
0.241 (0.335) |
0.0146 (0.0412) |
0.268 (0.36) |
0.114 (0.195) |
0.185 (0.273) |
0.482 (0.575) |
9p loss | 64 (43%) | 86 |
0.00055 (0.00333) |
0.718 (0.781) |
0.514 (0.604) |
0.26 (0.354) |
0.4 (0.492) |
0.388 (0.482) |
0.818 (0.864) |
0.773 (0.826) |
0.83 (0.873) |
0.831 (0.873) |
4p gain | 3 (2%) | 147 |
0.605 (0.679) |
0.579 (0.66) |
0.862 (0.899) |
1 (1.00) |
0.768 (0.823) |
0.683 (0.756) |
0.502 (0.595) |
1 (1.00) |
1 (1.00) |
0.779 (0.832) |
9p gain | 16 (11%) | 134 |
0.35 (0.446) |
0.52 (0.607) |
0.43 (0.524) |
0.694 (0.761) |
0.593 (0.669) |
0.296 (0.391) |
0.251 (0.347) |
0.141 (0.227) |
0.176 (0.263) |
0.459 (0.554) |
9q gain | 17 (11%) | 133 |
0.0863 (0.156) |
0.53 (0.617) |
0.803 (0.852) |
0.535 (0.621) |
0.163 (0.249) |
0.077 (0.143) |
0.445 (0.541) |
0.895 (0.926) |
0.54 (0.626) |
0.0978 (0.171) |
10p gain | 6 (4%) | 144 |
0.0538 (0.108) |
0.269 (0.36) |
0.642 (0.716) |
0.824 (0.868) |
0.153 (0.238) |
0.346 (0.443) |
0.152 (0.237) |
0.321 (0.42) |
0.37 (0.466) |
0.138 (0.224) |
10q gain | 10 (7%) | 140 |
0.227 (0.321) |
0.531 (0.617) |
0.694 (0.761) |
0.507 (0.598) |
0.137 (0.223) |
0.327 (0.425) |
0.221 (0.315) |
0.494 (0.587) |
0.586 (0.664) |
0.269 (0.36) |
12p gain | 146 (97%) | 4 |
0.23 (0.323) |
0.421 (0.515) |
0.518 (0.607) |
0.542 (0.627) |
0.132 (0.217) |
0.371 (0.466) |
0.252 (0.348) |
0.583 (0.661) |
0.692 (0.761) |
0.187 (0.276) |
12q gain | 100 (67%) | 50 |
0.772 (0.825) |
0.331 (0.427) |
0.267 (0.359) |
0.547 (0.632) |
0.146 (0.23) |
0.338 (0.435) |
0.106 (0.182) |
0.176 (0.263) |
0.076 (0.142) |
0.0779 (0.144) |
14q gain | 51 (34%) | 99 |
0.0681 (0.13) |
0.687 (0.759) |
0.588 (0.665) |
0.568 (0.651) |
0.917 (0.942) |
0.397 (0.49) |
0.762 (0.821) |
0.306 (0.402) |
0.203 (0.294) |
0.768 (0.823) |
18p gain | 4 (3%) | 146 |
0.629 (0.703) |
0.513 (0.604) |
0.691 (0.761) |
1 (1.00) |
0.469 (0.565) |
0.784 (0.835) |
0.679 (0.753) |
0.48 (0.574) |
0.575 (0.657) |
0.882 (0.914) |
21q gain | 126 (84%) | 24 |
0.142 (0.227) |
0.173 (0.261) |
0.118 (0.199) |
0.553 (0.638) |
0.104 (0.179) |
0.259 (0.354) |
0.26 (0.354) |
0.0912 (0.164) |
0.171 (0.258) |
0.195 (0.284) |
1q loss | 9 (6%) | 141 |
0.166 (0.254) |
0.503 (0.595) |
0.92 (0.944) |
1 (1.00) |
0.738 (0.802) |
0.653 (0.727) |
0.574 (0.657) |
0.615 (0.688) |
0.299 (0.394) |
0.878 (0.91) |
2p loss | 4 (3%) | 146 |
1 (1.00) |
0.904 (0.934) |
1 (1.00) |
0.911 (0.938) |
1 (1.00) |
1 (1.00) |
1 (1.00) |
0.704 (0.77) |
||
2q loss | 5 (3%) | 145 |
0.908 (0.937) |
0.748 (0.81) |
0.862 (0.899) |
0.598 (0.673) |
0.654 (0.727) |
0.583 (0.661) |
0.855 (0.894) |
0.52 (0.607) |
0.376 (0.47) |
0.256 (0.351) |
7q loss | 4 (3%) | 146 |
0.134 (0.22) |
1 (1.00) |
0.406 (0.5) |
0.0522 (0.106) |
0.795 (0.846) |
0.258 (0.354) |
0.384 (0.479) |
0.697 (0.763) |
0.812 (0.859) |
0.0799 (0.147) |
20q loss | 15 (10%) | 135 |
0.956 (0.978) |
0.744 (0.808) |
0.553 (0.638) |
0.328 (0.425) |
0.17 (0.257) |
0.357 (0.453) |
0.216 (0.31) |
0.415 (0.507) |
0.364 (0.461) |
0.461 (0.556) |
P value = 0.014 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
1P GAIN MUTATED | 11 | 6 | 20 | 0 |
1P GAIN WILD-TYPE | 37 | 28 | 34 | 14 |
P value = 0.00307 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
1P GAIN MUTATED | 8 | 4 | 17 | 8 |
1P GAIN WILD-TYPE | 37 | 16 | 17 | 43 |
P value = 0.00022 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
1P GAIN MUTATED | 5 | 2 | 4 | 9 | 12 |
1P GAIN WILD-TYPE | 40 | 6 | 6 | 28 | 6 |
P value = 0.00249 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
1P GAIN MUTATED | 6 | 8 | 18 |
1P GAIN WILD-TYPE | 45 | 17 | 24 |
P value = 0.00189 (Fisher's exact test), Q value = 0.0091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
1P GAIN MUTATED | 4 | 3 | 17 | 4 | 2 | 7 | 0 |
1P GAIN WILD-TYPE | 30 | 27 | 16 | 18 | 6 | 15 | 1 |
P value = 0.00051 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
1P GAIN MUTATED | 5 | 3 | 3 | 8 | 4 | 13 | 1 |
1P GAIN WILD-TYPE | 38 | 24 | 9 | 16 | 4 | 10 | 12 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
1P GAIN MUTATED | 4 | 24 | 9 |
1P GAIN WILD-TYPE | 47 | 33 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
1P GAIN MUTATED | 8 | 20 | 9 |
1P GAIN WILD-TYPE | 62 | 18 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
1P GAIN MUTATED | 7 | 21 | 9 |
1P GAIN WILD-TYPE | 62 | 15 | 36 |
P value = 0.00047 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
1P GAIN MUTATED | 4 | 4 | 11 | 6 | 9 | 3 |
1P GAIN WILD-TYPE | 30 | 32 | 8 | 21 | 10 | 12 |
P value = 0.0368 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
1Q GAIN MUTATED | 16 | 19 | 23 | 2 |
1Q GAIN WILD-TYPE | 32 | 15 | 31 | 12 |
P value = 0.0375 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
1Q GAIN MUTATED | 11 | 15 | 2 | 12 | 3 | 13 | 4 |
1Q GAIN WILD-TYPE | 32 | 12 | 10 | 12 | 5 | 10 | 9 |
P value = 0.0101 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
2P GAIN MUTATED | 8 | 3 | 14 | 22 |
2P GAIN WILD-TYPE | 37 | 17 | 20 | 29 |
P value = 0.0374 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
2P GAIN MUTATED | 9 | 10 | 16 |
2P GAIN WILD-TYPE | 42 | 15 | 26 |
P value = 0.0302 (Fisher's exact test), Q value = 0.071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
2P GAIN MUTATED | 7 | 7 | 11 | 6 | 2 | 14 | 0 |
2P GAIN WILD-TYPE | 27 | 23 | 22 | 16 | 6 | 8 | 1 |
P value = 0.0293 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
2P GAIN MUTATED | 10 | 18 | 19 |
2P GAIN WILD-TYPE | 41 | 39 | 23 |
P value = 0.0131 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
2P GAIN MUTATED | 14 | 14 | 19 |
2P GAIN WILD-TYPE | 56 | 24 | 23 |
P value = 0.0181 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
2P GAIN MUTATED | 14 | 13 | 20 |
2P GAIN WILD-TYPE | 55 | 23 | 25 |
P value = 0.019 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
2P GAIN MUTATED | 4 | 10 | 9 | 13 | 5 | 6 |
2P GAIN WILD-TYPE | 30 | 26 | 10 | 14 | 14 | 9 |
P value = 0.0319 (Fisher's exact test), Q value = 0.073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
2Q GAIN MUTATED | 11 | 1 | 11 | 19 |
2Q GAIN WILD-TYPE | 34 | 19 | 23 | 32 |
P value = 0.00171 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
3P GAIN MUTATED | 3 | 0 | 0 | 14 | 3 |
3P GAIN WILD-TYPE | 42 | 8 | 10 | 23 | 15 |
P value = 0.0134 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
3P GAIN MUTATED | 3 | 7 | 10 |
3P GAIN WILD-TYPE | 48 | 18 | 32 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
3P GAIN MUTATED | 2 | 2 | 6 | 2 | 1 | 13 | 0 |
3P GAIN WILD-TYPE | 32 | 28 | 27 | 20 | 7 | 9 | 1 |
P value = 0.00307 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
3P GAIN MUTATED | 3 | 2 | 3 | 5 | 3 | 3 | 7 |
3P GAIN WILD-TYPE | 40 | 25 | 9 | 19 | 5 | 20 | 6 |
P value = 0.00545 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
3P GAIN MUTATED | 5 | 9 | 12 |
3P GAIN WILD-TYPE | 65 | 29 | 30 |
P value = 0.00602 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
3P GAIN MUTATED | 5 | 8 | 13 |
3P GAIN WILD-TYPE | 64 | 28 | 32 |
P value = 0.0268 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
3P GAIN MUTATED | 3 | 2 | 5 | 8 | 3 | 5 |
3P GAIN WILD-TYPE | 31 | 34 | 14 | 19 | 16 | 10 |
P value = 0.0101 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
3Q GAIN MUTATED | 5 | 2 | 13 | 15 |
3Q GAIN WILD-TYPE | 40 | 18 | 21 | 36 |
P value = 0.00214 (Fisher's exact test), Q value = 0.0098
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
3Q GAIN MUTATED | 4 | 0 | 2 | 16 | 4 |
3Q GAIN WILD-TYPE | 41 | 8 | 8 | 21 | 14 |
P value = 0.00332 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
3Q GAIN MUTATED | 4 | 9 | 13 |
3Q GAIN WILD-TYPE | 47 | 16 | 29 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
3Q GAIN MUTATED | 2 | 6 | 10 | 2 | 2 | 13 | 0 |
3Q GAIN WILD-TYPE | 32 | 24 | 23 | 20 | 6 | 9 | 1 |
P value = 0.0138 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
3Q GAIN MUTATED | 4 | 5 | 5 | 5 | 3 | 6 | 7 |
3Q GAIN WILD-TYPE | 39 | 22 | 7 | 19 | 5 | 17 | 6 |
P value = 0.0495 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
3Q GAIN MUTATED | 6 | 17 | 12 |
3Q GAIN WILD-TYPE | 45 | 40 | 30 |
P value = 0.0104 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
3Q GAIN MUTATED | 9 | 14 | 12 |
3Q GAIN WILD-TYPE | 61 | 24 | 30 |
P value = 0.0194 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
3Q GAIN MUTATED | 9 | 12 | 14 |
3Q GAIN WILD-TYPE | 60 | 24 | 31 |
P value = 0.0313 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
5P GAIN MUTATED | 2 | 0 | 4 | 0 |
5P GAIN WILD-TYPE | 43 | 20 | 30 | 51 |
P value = 0.00901 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
5P GAIN MUTATED | 1 | 0 | 0 | 0 | 4 |
5P GAIN WILD-TYPE | 44 | 8 | 10 | 37 | 14 |
P value = 0.00799 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
5P GAIN MUTATED | 0 | 1 | 0 | 0 | 2 | 3 | 0 |
5P GAIN WILD-TYPE | 43 | 26 | 12 | 24 | 6 | 20 | 13 |
P value = 0.00415 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
5P GAIN MUTATED | 0 | 6 | 0 |
5P GAIN WILD-TYPE | 51 | 51 | 42 |
P value = 0.00697 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
5P GAIN MUTATED | 1 | 5 | 0 |
5P GAIN WILD-TYPE | 69 | 33 | 42 |
P value = 0.00378 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
5P GAIN MUTATED | 1 | 5 | 0 |
5P GAIN WILD-TYPE | 68 | 31 | 45 |
P value = 0.0229 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
5P GAIN MUTATED | 0 | 1 | 2 | 0 | 3 | 0 |
5P GAIN WILD-TYPE | 34 | 35 | 17 | 27 | 16 | 15 |
P value = 0.0423 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
5Q GAIN MUTATED | 0 | 0 | 0 | 0 | 1 | 2 | 0 |
5Q GAIN WILD-TYPE | 43 | 27 | 12 | 24 | 7 | 21 | 13 |
P value = 0.0146 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
5Q GAIN MUTATED | 0 | 3 | 0 |
5Q GAIN WILD-TYPE | 70 | 35 | 42 |
P value = 0.0119 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
5Q GAIN MUTATED | 0 | 3 | 0 |
5Q GAIN WILD-TYPE | 69 | 33 | 45 |
P value = 0.0431 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
5Q GAIN MUTATED | 0 | 0 | 2 | 0 | 1 | 0 |
5Q GAIN WILD-TYPE | 34 | 36 | 17 | 27 | 18 | 15 |
P value = 0.0417 (Fisher's exact test), Q value = 0.091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
6P GAIN MUTATED | 6 | 9 | 6 |
6P GAIN WILD-TYPE | 45 | 16 | 36 |
P value = 0.0308 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
6P GAIN MUTATED | 8 | 1 | 5 | 7 | 0 | 7 | 0 |
6P GAIN WILD-TYPE | 26 | 29 | 28 | 15 | 8 | 15 | 1 |
P value = 0.00082 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
6P GAIN MUTATED | 8 | 1 | 0 | 12 | 0 | 5 | 2 |
6P GAIN WILD-TYPE | 35 | 26 | 12 | 12 | 8 | 18 | 11 |
P value = 0.0053 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
6P GAIN MUTATED | 7 | 6 | 15 |
6P GAIN WILD-TYPE | 44 | 51 | 27 |
P value = 0.00648 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
6P GAIN MUTATED | 9 | 4 | 15 |
6P GAIN WILD-TYPE | 61 | 34 | 27 |
P value = 0.0201 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
6P GAIN MUTATED | 7 | 2 | 4 | 9 | 1 | 5 |
6P GAIN WILD-TYPE | 27 | 34 | 15 | 18 | 18 | 10 |
P value = 0.00636 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
6Q GAIN MUTATED | 8 | 0 | 3 | 7 | 0 | 5 | 0 |
6Q GAIN WILD-TYPE | 26 | 30 | 30 | 15 | 8 | 17 | 1 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
6Q GAIN MUTATED | 8 | 0 | 0 | 11 | 0 | 3 | 1 |
6Q GAIN WILD-TYPE | 35 | 27 | 12 | 13 | 8 | 20 | 12 |
P value = 0.0021 (Fisher's exact test), Q value = 0.0097
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
6Q GAIN MUTATED | 7 | 3 | 13 |
6Q GAIN WILD-TYPE | 44 | 54 | 29 |
P value = 0.00432 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
6Q GAIN MUTATED | 8 | 2 | 13 |
6Q GAIN WILD-TYPE | 62 | 36 | 29 |
P value = 0.0216 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
6Q GAIN MUTATED | 6 | 2 | 3 | 8 | 0 | 4 |
6Q GAIN WILD-TYPE | 28 | 34 | 16 | 19 | 19 | 11 |
P value = 0.0155 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
7P GAIN MUTATED | 39 | 8 | 5 | 25 | 16 |
7P GAIN WILD-TYPE | 6 | 0 | 5 | 12 | 2 |
P value = 0.0213 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
7P GAIN MUTATED | 45 | 15 | 33 |
7P GAIN WILD-TYPE | 6 | 10 | 9 |
P value = 0.00076 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
7P GAIN MUTATED | 32 | 27 | 28 | 11 | 6 | 17 | 0 |
7P GAIN WILD-TYPE | 2 | 3 | 5 | 11 | 2 | 5 | 1 |
P value = 0.00859 (Fisher's exact test), Q value = 0.028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
7P GAIN MUTATED | 38 | 24 | 7 | 16 | 6 | 22 | 8 |
7P GAIN WILD-TYPE | 5 | 3 | 5 | 8 | 2 | 1 | 5 |
P value = 0.0116 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
7P GAIN MUTATED | 44 | 50 | 27 |
7P GAIN WILD-TYPE | 7 | 7 | 15 |
P value = 0.00747 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
7P GAIN MUTATED | 62 | 32 | 27 |
7P GAIN WILD-TYPE | 8 | 6 | 15 |
P value = 0.00706 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
7P GAIN MUTATED | 61 | 31 | 29 |
7P GAIN WILD-TYPE | 8 | 5 | 16 |
P value = 0.0452 (Fisher's exact test), Q value = 0.096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
7Q GAIN MUTATED | 33 | 12 | 29 | 30 |
7Q GAIN WILD-TYPE | 12 | 8 | 5 | 21 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
7Q GAIN MUTATED | 30 | 18 | 27 | 6 | 6 | 17 | 0 |
7Q GAIN WILD-TYPE | 4 | 12 | 6 | 16 | 2 | 5 | 1 |
P value = 0.00813 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
7Q GAIN MUTATED | 36 | 15 | 8 | 11 | 6 | 20 | 8 |
7Q GAIN WILD-TYPE | 7 | 12 | 4 | 13 | 2 | 3 | 5 |
P value = 0.0243 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
7Q GAIN MUTATED | 38 | 44 | 22 |
7Q GAIN WILD-TYPE | 13 | 13 | 20 |
P value = 0.0142 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
7Q GAIN MUTATED | 51 | 31 | 22 |
7Q GAIN WILD-TYPE | 19 | 7 | 20 |
P value = 0.0124 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
7Q GAIN MUTATED | 50 | 30 | 24 |
7Q GAIN WILD-TYPE | 19 | 6 | 21 |
P value = 0.00796 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
7Q GAIN MUTATED | 29 | 22 | 14 | 13 | 17 | 9 |
7Q GAIN WILD-TYPE | 5 | 14 | 5 | 14 | 2 | 6 |
P value = 0.00081 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
8P GAIN MUTATED | 37 | 20 | 22 | 31 |
8P GAIN WILD-TYPE | 8 | 0 | 12 | 20 |
P value = 0.00091 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
8P GAIN MUTATED | 41 | 6 | 4 | 22 | 12 |
8P GAIN WILD-TYPE | 4 | 2 | 6 | 15 | 6 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
8P GAIN MUTATED | 46 | 12 | 27 |
8P GAIN WILD-TYPE | 5 | 13 | 15 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
8P GAIN MUTATED | 30 | 29 | 23 | 13 | 5 | 9 | 1 |
8P GAIN WILD-TYPE | 4 | 1 | 10 | 9 | 3 | 13 | 0 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
8P GAIN MUTATED | 37 | 26 | 8 | 14 | 5 | 15 | 5 |
8P GAIN WILD-TYPE | 6 | 1 | 4 | 10 | 3 | 8 | 8 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
8P GAIN MUTATED | 45 | 44 | 21 |
8P GAIN WILD-TYPE | 6 | 13 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
8P GAIN MUTATED | 63 | 26 | 21 |
8P GAIN WILD-TYPE | 7 | 12 | 21 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
8P GAIN MUTATED | 62 | 24 | 24 |
8P GAIN WILD-TYPE | 7 | 12 | 21 |
P value = 1e-04 (Fisher's exact test), Q value = 0.00085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
8P GAIN MUTATED | 29 | 34 | 14 | 14 | 12 | 7 |
8P GAIN WILD-TYPE | 5 | 2 | 5 | 13 | 7 | 8 |
P value = 0.0115 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
8Q GAIN MUTATED | 32 | 29 | 36 | 14 |
8Q GAIN WILD-TYPE | 16 | 5 | 18 | 0 |
P value = 0.00711 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
8Q GAIN MUTATED | 40 | 17 | 23 | 31 |
8Q GAIN WILD-TYPE | 5 | 3 | 11 | 20 |
P value = 0.0128 (Fisher's exact test), Q value = 0.038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
8Q GAIN MUTATED | 40 | 6 | 6 | 21 | 13 |
8Q GAIN WILD-TYPE | 5 | 2 | 4 | 16 | 5 |
P value = 0.00228 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
8Q GAIN MUTATED | 45 | 14 | 27 |
8Q GAIN WILD-TYPE | 6 | 11 | 15 |
P value = 4e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
8Q GAIN MUTATED | 33 | 25 | 24 | 14 | 5 | 9 | 1 |
8Q GAIN WILD-TYPE | 1 | 5 | 9 | 8 | 3 | 13 | 0 |
P value = 0.00032 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
8Q GAIN MUTATED | 40 | 22 | 8 | 15 | 5 | 17 | 4 |
8Q GAIN WILD-TYPE | 3 | 5 | 4 | 9 | 3 | 6 | 9 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
8Q GAIN MUTATED | 46 | 43 | 22 |
8Q GAIN WILD-TYPE | 5 | 14 | 20 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
8Q GAIN MUTATED | 62 | 27 | 22 |
8Q GAIN WILD-TYPE | 8 | 11 | 20 |
P value = 0.00028 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
8Q GAIN MUTATED | 61 | 25 | 25 |
8Q GAIN WILD-TYPE | 8 | 11 | 20 |
P value = 0.00172 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
8Q GAIN MUTATED | 31 | 31 | 14 | 15 | 13 | 7 |
8Q GAIN WILD-TYPE | 3 | 5 | 5 | 12 | 6 | 8 |
P value = 0.0499 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
11P GAIN MUTATED | 1 | 0 | 2 | 1 | 3 |
11P GAIN WILD-TYPE | 44 | 8 | 8 | 36 | 15 |
P value = 0.0394 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
11P GAIN MUTATED | 1 | 1 | 0 | 1 | 2 | 1 | 3 |
11P GAIN WILD-TYPE | 42 | 26 | 12 | 23 | 6 | 22 | 10 |
P value = 0.0308 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
11Q GAIN MUTATED | 0 | 0 | 0 | 0 | 0 | 1 | 2 |
11Q GAIN WILD-TYPE | 43 | 27 | 12 | 24 | 8 | 22 | 11 |
P value = 0.0323 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
15Q GAIN MUTATED | 19 | 17 | 12 | 3 |
15Q GAIN WILD-TYPE | 29 | 17 | 42 | 11 |
P value = 0.0167 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
15Q GAIN MUTATED | 24 | 5 | 8 | 14 |
15Q GAIN WILD-TYPE | 21 | 15 | 26 | 37 |
P value = 0.00191 (Fisher's exact test), Q value = 0.0091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
15Q GAIN MUTATED | 24 | 2 | 2 | 5 | 4 |
15Q GAIN WILD-TYPE | 21 | 6 | 8 | 32 | 14 |
P value = 0.00039 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
15Q GAIN MUTATED | 26 | 3 | 8 |
15Q GAIN WILD-TYPE | 25 | 22 | 34 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
15Q GAIN MUTATED | 23 | 13 | 8 | 3 | 2 | 2 | 0 |
15Q GAIN WILD-TYPE | 11 | 17 | 25 | 19 | 6 | 20 | 1 |
P value = 4e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
15Q GAIN MUTATED | 26 | 12 | 1 | 4 | 0 | 7 | 1 |
15Q GAIN WILD-TYPE | 17 | 15 | 11 | 20 | 8 | 16 | 12 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
15Q GAIN MUTATED | 27 | 19 | 5 |
15Q GAIN WILD-TYPE | 24 | 38 | 37 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
15Q GAIN MUTATED | 38 | 8 | 5 |
15Q GAIN WILD-TYPE | 32 | 30 | 37 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
15Q GAIN MUTATED | 37 | 8 | 6 |
15Q GAIN WILD-TYPE | 32 | 28 | 39 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
15Q GAIN MUTATED | 22 | 16 | 6 | 3 | 2 | 2 |
15Q GAIN WILD-TYPE | 12 | 20 | 13 | 24 | 17 | 13 |
P value = 0.00366 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
16P GAIN MUTATED | 2 | 8 | 5 |
16P GAIN WILD-TYPE | 49 | 17 | 37 |
P value = 0.0364 (Fisher's exact test), Q value = 0.082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
16P GAIN MUTATED | 2 | 2 | 1 | 8 | 0 | 2 | 2 |
16P GAIN WILD-TYPE | 41 | 25 | 11 | 16 | 8 | 21 | 11 |
P value = 0.00391 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
16P GAIN MUTATED | 1 | 6 | 10 |
16P GAIN WILD-TYPE | 50 | 51 | 32 |
P value = 0.0166 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
16P GAIN MUTATED | 4 | 3 | 10 |
16P GAIN WILD-TYPE | 66 | 35 | 32 |
P value = 0.00838 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
16P GAIN MUTATED | 4 | 2 | 11 |
16P GAIN WILD-TYPE | 65 | 34 | 34 |
P value = 0.00807 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
16Q GAIN MUTATED | 1 | 6 | 5 |
16Q GAIN WILD-TYPE | 50 | 19 | 37 |
P value = 0.0217 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
16Q GAIN MUTATED | 1 | 6 | 8 |
16Q GAIN WILD-TYPE | 50 | 51 | 34 |
P value = 0.0383 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
16Q GAIN MUTATED | 3 | 4 | 8 |
16Q GAIN WILD-TYPE | 67 | 34 | 34 |
P value = 0.0259 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
16Q GAIN MUTATED | 3 | 3 | 9 |
16Q GAIN WILD-TYPE | 66 | 33 | 36 |
P value = 0.0424 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
16Q GAIN MUTATED | 0 | 3 | 3 | 6 | 1 | 2 |
16Q GAIN WILD-TYPE | 34 | 33 | 16 | 21 | 18 | 13 |
P value = 0.00111 (Fisher's exact test), Q value = 0.0059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
17P GAIN MUTATED | 9 | 3 | 24 | 4 |
17P GAIN WILD-TYPE | 39 | 31 | 30 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
17P GAIN MUTATED | 2 | 3 | 18 | 17 |
17P GAIN WILD-TYPE | 43 | 17 | 16 | 34 |
P value = 4e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
17P GAIN MUTATED | 2 | 0 | 5 | 15 | 8 |
17P GAIN WILD-TYPE | 43 | 8 | 5 | 22 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
17P GAIN MUTATED | 2 | 11 | 17 |
17P GAIN WILD-TYPE | 49 | 14 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
17P GAIN MUTATED | 0 | 2 | 17 | 7 | 2 | 11 | 1 |
17P GAIN WILD-TYPE | 34 | 28 | 16 | 15 | 6 | 11 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
17P GAIN MUTATED | 2 | 1 | 5 | 11 | 4 | 12 | 5 |
17P GAIN WILD-TYPE | 41 | 26 | 7 | 13 | 4 | 11 | 8 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
17P GAIN MUTATED | 2 | 20 | 18 |
17P GAIN WILD-TYPE | 49 | 37 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
17P GAIN MUTATED | 3 | 19 | 18 |
17P GAIN WILD-TYPE | 67 | 19 | 24 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
17P GAIN MUTATED | 3 | 17 | 20 |
17P GAIN WILD-TYPE | 66 | 19 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
17P GAIN MUTATED | 1 | 2 | 11 | 11 | 9 | 6 |
17P GAIN WILD-TYPE | 33 | 34 | 8 | 16 | 10 | 9 |
P value = 0.007 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
17Q GAIN MUTATED | 12 | 6 | 27 | 5 |
17Q GAIN WILD-TYPE | 36 | 28 | 27 | 9 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
17Q GAIN MUTATED | 4 | 6 | 20 | 20 |
17Q GAIN WILD-TYPE | 41 | 14 | 14 | 31 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
17Q GAIN MUTATED | 5 | 0 | 5 | 19 | 10 |
17Q GAIN WILD-TYPE | 40 | 8 | 5 | 18 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
17Q GAIN MUTATED | 5 | 12 | 22 |
17Q GAIN WILD-TYPE | 46 | 13 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
17Q GAIN MUTATED | 2 | 4 | 20 | 8 | 2 | 13 | 1 |
17Q GAIN WILD-TYPE | 32 | 26 | 13 | 14 | 6 | 9 | 0 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
17Q GAIN MUTATED | 4 | 3 | 6 | 13 | 4 | 14 | 6 |
17Q GAIN WILD-TYPE | 39 | 24 | 6 | 11 | 4 | 9 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
17Q GAIN MUTATED | 4 | 24 | 22 |
17Q GAIN WILD-TYPE | 47 | 33 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
17Q GAIN MUTATED | 7 | 21 | 22 |
17Q GAIN WILD-TYPE | 63 | 17 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
17Q GAIN MUTATED | 6 | 20 | 24 |
17Q GAIN WILD-TYPE | 63 | 16 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
17Q GAIN MUTATED | 2 | 5 | 10 | 13 | 11 | 9 |
17Q GAIN WILD-TYPE | 32 | 31 | 9 | 14 | 8 | 6 |
P value = 0.00418 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
19P GAIN MUTATED | 10 | 16 | 7 | 4 |
19P GAIN WILD-TYPE | 38 | 18 | 47 | 10 |
P value = 0.0147 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
19P GAIN MUTATED | 13 | 10 | 4 | 10 |
19P GAIN WILD-TYPE | 32 | 10 | 30 | 41 |
P value = 0.0133 (Fisher's exact test), Q value = 0.039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
19P GAIN MUTATED | 20 | 1 | 1 | 5 | 4 |
19P GAIN WILD-TYPE | 25 | 7 | 9 | 32 | 14 |
P value = 0.00694 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
19P GAIN MUTATED | 21 | 3 | 7 |
19P GAIN WILD-TYPE | 30 | 22 | 35 |
P value = 0.00217 (Fisher's exact test), Q value = 0.0099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
19P GAIN MUTATED | 12 | 15 | 4 | 3 | 1 | 2 | 0 |
19P GAIN WILD-TYPE | 22 | 15 | 29 | 19 | 7 | 20 | 1 |
P value = 0.00118 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
19P GAIN MUTATED | 14 | 14 | 0 | 4 | 0 | 4 | 1 |
19P GAIN WILD-TYPE | 29 | 13 | 12 | 20 | 8 | 19 | 12 |
P value = 0.00014 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
19P GAIN MUTATED | 28 | 3 | 6 |
19P GAIN WILD-TYPE | 42 | 35 | 36 |
P value = 0.00087 (Fisher's exact test), Q value = 0.0048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
19P GAIN MUTATED | 27 | 5 | 5 |
19P GAIN WILD-TYPE | 42 | 31 | 40 |
P value = 0.00092 (Fisher's exact test), Q value = 0.005
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
19P GAIN MUTATED | 10 | 18 | 3 | 3 | 1 | 2 |
19P GAIN WILD-TYPE | 24 | 18 | 16 | 24 | 18 | 13 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
19Q GAIN MUTATED | 8 | 16 | 3 | 2 |
19Q GAIN WILD-TYPE | 40 | 18 | 51 | 12 |
P value = 0.00153 (Fisher's exact test), Q value = 0.0079
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
19Q GAIN MUTATED | 10 | 9 | 1 | 9 |
19Q GAIN WILD-TYPE | 35 | 11 | 33 | 42 |
P value = 0.00198 (Fisher's exact test), Q value = 0.0093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
19Q GAIN MUTATED | 18 | 0 | 1 | 4 | 1 |
19Q GAIN WILD-TYPE | 27 | 8 | 9 | 33 | 17 |
P value = 0.00248 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
19Q GAIN MUTATED | 18 | 2 | 4 |
19Q GAIN WILD-TYPE | 33 | 23 | 38 |
P value = 0.00051 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
19Q GAIN MUTATED | 10 | 13 | 1 | 3 | 1 | 1 | 0 |
19Q GAIN WILD-TYPE | 24 | 17 | 32 | 19 | 7 | 21 | 1 |
P value = 0.00056 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
19Q GAIN MUTATED | 11 | 13 | 0 | 3 | 0 | 1 | 1 |
19Q GAIN WILD-TYPE | 32 | 14 | 12 | 21 | 8 | 22 | 12 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
19Q GAIN MUTATED | 24 | 1 | 4 |
19Q GAIN WILD-TYPE | 46 | 37 | 38 |
P value = 0.00035 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
19Q GAIN MUTATED | 23 | 2 | 4 |
19Q GAIN WILD-TYPE | 46 | 34 | 41 |
P value = 2e-04 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
19Q GAIN MUTATED | 8 | 16 | 1 | 3 | 0 | 1 |
19Q GAIN WILD-TYPE | 26 | 20 | 18 | 24 | 19 | 14 |
P value = 0.0182 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
20P GAIN MUTATED | 5 | 7 | 17 | 6 |
20P GAIN WILD-TYPE | 43 | 27 | 37 | 8 |
P value = 0.0106 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
20P GAIN MUTATED | 4 | 4 | 8 | 19 |
20P GAIN WILD-TYPE | 41 | 16 | 26 | 32 |
P value = 0.0494 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
20Q GAIN MUTATED | 8 | 7 | 20 | 6 |
20Q GAIN WILD-TYPE | 40 | 27 | 34 | 8 |
P value = 0.00289 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
20Q GAIN MUTATED | 5 | 3 | 12 | 21 |
20Q GAIN WILD-TYPE | 40 | 17 | 22 | 30 |
P value = 0.0422 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
20Q GAIN MUTATED | 7 | 1 | 3 | 13 | 9 |
20Q GAIN WILD-TYPE | 38 | 7 | 7 | 24 | 9 |
P value = 0.0281 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
20Q GAIN MUTATED | 8 | 10 | 15 |
20Q GAIN WILD-TYPE | 43 | 15 | 27 |
P value = 0.00512 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
20Q GAIN MUTATED | 6 | 5 | 10 | 4 | 2 | 14 | 0 |
20Q GAIN WILD-TYPE | 28 | 25 | 23 | 18 | 6 | 8 | 1 |
P value = 0.0335 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
20Q GAIN MUTATED | 10 | 13 | 18 |
20Q GAIN WILD-TYPE | 41 | 44 | 24 |
P value = 0.0124 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
20Q GAIN MUTATED | 12 | 11 | 18 |
20Q GAIN WILD-TYPE | 58 | 27 | 24 |
P value = 0.0166 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
20Q GAIN MUTATED | 12 | 10 | 19 |
20Q GAIN WILD-TYPE | 57 | 26 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
22Q GAIN MUTATED | 11 | 21 | 5 | 2 |
22Q GAIN WILD-TYPE | 37 | 13 | 49 | 12 |
P value = 0.0165 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
22Q GAIN MUTATED | 18 | 2 | 3 | 4 | 2 |
22Q GAIN WILD-TYPE | 27 | 6 | 7 | 33 | 16 |
P value = 0.00444 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
22Q GAIN MUTATED | 20 | 2 | 7 |
22Q GAIN WILD-TYPE | 31 | 23 | 35 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
22Q GAIN MUTATED | 9 | 20 | 2 | 4 | 1 | 3 | 0 |
22Q GAIN WILD-TYPE | 25 | 10 | 31 | 18 | 7 | 19 | 1 |
P value = 4e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
22Q GAIN MUTATED | 12 | 18 | 1 | 4 | 1 | 1 | 2 |
22Q GAIN WILD-TYPE | 31 | 9 | 11 | 20 | 7 | 22 | 11 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
22Q GAIN MUTATED | 30 | 3 | 6 |
22Q GAIN WILD-TYPE | 40 | 35 | 36 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
22Q GAIN MUTATED | 29 | 4 | 6 |
22Q GAIN WILD-TYPE | 40 | 32 | 39 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
22Q GAIN MUTATED | 9 | 21 | 1 | 4 | 2 | 2 |
22Q GAIN WILD-TYPE | 25 | 15 | 18 | 23 | 17 | 13 |
P value = 0.0197 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
XP GAIN MUTATED | 2 | 1 | 7 | 12 |
XP GAIN WILD-TYPE | 43 | 19 | 27 | 39 |
P value = 0.0383 (Fisher's exact test), Q value = 0.085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
XP GAIN MUTATED | 3 | 0 | 2 | 10 | 5 |
XP GAIN WILD-TYPE | 42 | 8 | 8 | 27 | 13 |
P value = 0.00922 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
XP GAIN MUTATED | 3 | 5 | 12 |
XP GAIN WILD-TYPE | 48 | 20 | 30 |
P value = 0.00355 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
XP GAIN MUTATED | 2 | 1 | 5 | 5 | 0 | 9 | 0 |
XP GAIN WILD-TYPE | 32 | 29 | 28 | 17 | 8 | 13 | 1 |
P value = 0.00308 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
XP GAIN MUTATED | 2 | 1 | 3 | 7 | 0 | 4 | 5 |
XP GAIN WILD-TYPE | 41 | 26 | 9 | 17 | 8 | 19 | 8 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
XP GAIN MUTATED | 2 | 6 | 14 |
XP GAIN WILD-TYPE | 49 | 51 | 28 |
P value = 0.00018 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
XP GAIN MUTATED | 3 | 5 | 14 |
XP GAIN WILD-TYPE | 67 | 33 | 28 |
P value = 0.00166 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
XP GAIN MUTATED | 3 | 7 | 12 |
XP GAIN WILD-TYPE | 66 | 29 | 33 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
XP GAIN MUTATED | 2 | 1 | 6 | 11 | 1 | 1 |
XP GAIN WILD-TYPE | 32 | 35 | 13 | 16 | 18 | 14 |
P value = 0.0392 (Fisher's exact test), Q value = 0.086
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
XQ GAIN MUTATED | 3 | 1 | 4 | 8 | 5 |
XQ GAIN WILD-TYPE | 42 | 7 | 6 | 29 | 13 |
P value = 0.00755 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
XQ GAIN MUTATED | 3 | 6 | 12 |
XQ GAIN WILD-TYPE | 48 | 19 | 30 |
P value = 0.0082 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
XQ GAIN MUTATED | 2 | 1 | 7 | 5 | 0 | 8 | 0 |
XQ GAIN WILD-TYPE | 32 | 29 | 26 | 17 | 8 | 14 | 1 |
P value = 0.00257 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
XQ GAIN MUTATED | 2 | 1 | 3 | 7 | 0 | 5 | 5 |
XQ GAIN WILD-TYPE | 41 | 26 | 9 | 17 | 8 | 18 | 8 |
P value = 0.00161 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
XQ GAIN MUTATED | 2 | 8 | 13 |
XQ GAIN WILD-TYPE | 49 | 49 | 29 |
P value = 0.00032 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
XQ GAIN MUTATED | 3 | 7 | 13 |
XQ GAIN WILD-TYPE | 67 | 31 | 29 |
P value = 0.00083 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
XQ GAIN MUTATED | 3 | 7 | 13 |
XQ GAIN WILD-TYPE | 66 | 29 | 32 |
P value = 0.00045 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
XQ GAIN MUTATED | 2 | 1 | 5 | 11 | 2 | 2 |
XQ GAIN WILD-TYPE | 32 | 35 | 14 | 16 | 17 | 13 |
P value = 0.0428 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
1P LOSS MUTATED | 11 | 3 | 6 |
1P LOSS WILD-TYPE | 40 | 54 | 36 |
P value = 0.00334 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
3P LOSS MUTATED | 12 | 4 | 12 | 3 |
3P LOSS WILD-TYPE | 33 | 16 | 22 | 48 |
P value = 0.017 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
3P LOSS MUTATED | 8 | 3 | 2 | 1 | 5 |
3P LOSS WILD-TYPE | 37 | 5 | 8 | 36 | 13 |
P value = 0.002 (Fisher's exact test), Q value = 0.0093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
3P LOSS MUTATED | 11 | 5 | 11 | 1 | 3 | 0 | 0 |
3P LOSS WILD-TYPE | 23 | 25 | 22 | 21 | 5 | 22 | 1 |
P value = 0.00231 (Fisher's exact test), Q value = 0.01
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
3P LOSS MUTATED | 14 | 4 | 1 | 1 | 1 | 10 | 0 |
3P LOSS WILD-TYPE | 29 | 23 | 11 | 23 | 7 | 13 | 13 |
P value = 8e-04 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
3P LOSS MUTATED | 13 | 17 | 1 |
3P LOSS WILD-TYPE | 38 | 40 | 41 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
3P LOSS MUTATED | 18 | 12 | 1 |
3P LOSS WILD-TYPE | 52 | 26 | 41 |
P value = 0.00186 (Fisher's exact test), Q value = 0.009
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
3P LOSS MUTATED | 18 | 11 | 2 |
3P LOSS WILD-TYPE | 51 | 25 | 43 |
P value = 0.00045 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
3P LOSS MUTATED | 11 | 7 | 3 | 0 | 9 | 1 |
3P LOSS WILD-TYPE | 23 | 29 | 16 | 27 | 10 | 14 |
P value = 0.0471 (Fisher's exact test), Q value = 0.099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
3Q LOSS MUTATED | 7 | 3 | 1 | 1 | 3 |
3Q LOSS WILD-TYPE | 38 | 5 | 9 | 36 | 15 |
P value = 0.0351 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
3Q LOSS MUTATED | 12 | 3 | 0 | 2 | 0 | 6 | 0 |
3Q LOSS WILD-TYPE | 31 | 24 | 12 | 22 | 8 | 17 | 13 |
P value = 0.0491 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
3Q LOSS MUTATED | 15 | 6 | 2 |
3Q LOSS WILD-TYPE | 55 | 32 | 40 |
P value = 0.0337 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
3Q LOSS MUTATED | 15 | 6 | 2 |
3Q LOSS WILD-TYPE | 54 | 30 | 43 |
P value = 0.026 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
4P LOSS MUTATED | 28 | 17 | 24 | 25 |
4P LOSS WILD-TYPE | 17 | 3 | 10 | 26 |
P value = 0.0426 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
4P LOSS MUTATED | 20 | 23 | 25 | 9 | 3 | 13 | 1 |
4P LOSS WILD-TYPE | 14 | 7 | 8 | 13 | 5 | 9 | 0 |
P value = 0.0176 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
4P LOSS MUTATED | 31 | 43 | 20 |
4P LOSS WILD-TYPE | 20 | 14 | 22 |
P value = 0.0445 (Fisher's exact test), Q value = 0.095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
4P LOSS MUTATED | 46 | 28 | 20 |
4P LOSS WILD-TYPE | 24 | 10 | 22 |
P value = 0.0137 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
4P LOSS MUTATED | 21 | 25 | 12 | 9 | 15 | 12 |
4P LOSS WILD-TYPE | 13 | 11 | 7 | 18 | 4 | 3 |
P value = 0.0293 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
4Q LOSS MUTATED | 21 | 26 | 29 | 14 | 5 | 13 | 1 |
4Q LOSS WILD-TYPE | 13 | 4 | 4 | 8 | 3 | 9 | 0 |
P value = 0.00553 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
4Q LOSS MUTATED | 27 | 24 | 10 | 13 | 7 | 21 | 7 |
4Q LOSS WILD-TYPE | 16 | 3 | 2 | 11 | 1 | 2 | 6 |
P value = 0.00174 (Fisher's exact test), Q value = 0.0085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
4Q LOSS MUTATED | 35 | 50 | 24 |
4Q LOSS WILD-TYPE | 16 | 7 | 18 |
P value = 0.00498 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
4Q LOSS MUTATED | 51 | 34 | 24 |
4Q LOSS WILD-TYPE | 19 | 4 | 18 |
P value = 0.0298 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
4Q LOSS MUTATED | 51 | 31 | 27 |
4Q LOSS WILD-TYPE | 18 | 5 | 18 |
P value = 0.00792 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
4Q LOSS MUTATED | 22 | 29 | 15 | 13 | 18 | 12 |
4Q LOSS WILD-TYPE | 12 | 7 | 4 | 14 | 1 | 3 |
P value = 0.0197 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
5P LOSS MUTATED | 31 | 30 | 35 | 7 |
5P LOSS WILD-TYPE | 17 | 4 | 19 | 7 |
P value = 0.0274 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
5P LOSS MUTATED | 31 | 7 | 4 | 27 | 7 |
5P LOSS WILD-TYPE | 14 | 1 | 6 | 10 | 11 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
5Q LOSS MUTATED | 31 | 32 | 33 | 5 |
5Q LOSS WILD-TYPE | 17 | 2 | 21 | 9 |
P value = 0.0224 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
5Q LOSS MUTATED | 33 | 17 | 16 | 35 |
5Q LOSS WILD-TYPE | 12 | 3 | 18 | 16 |
P value = 0.0397 (Fisher's exact test), Q value = 0.087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
5Q LOSS MUTATED | 33 | 6 | 4 | 26 | 7 |
5Q LOSS WILD-TYPE | 12 | 2 | 6 | 11 | 11 |
P value = 0.00277 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
5Q LOSS MUTATED | 23 | 28 | 16 | 16 | 4 | 13 | 1 |
5Q LOSS WILD-TYPE | 11 | 2 | 17 | 6 | 4 | 9 | 0 |
P value = 0.00349 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
5Q LOSS MUTATED | 29 | 26 | 8 | 15 | 3 | 12 | 8 |
5Q LOSS WILD-TYPE | 14 | 1 | 4 | 9 | 5 | 11 | 5 |
P value = 0.0101 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
5Q LOSS MUTATED | 55 | 19 | 27 |
5Q LOSS WILD-TYPE | 15 | 19 | 15 |
P value = 0.0201 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
5Q LOSS MUTATED | 54 | 19 | 28 |
5Q LOSS WILD-TYPE | 15 | 17 | 17 |
P value = 0.0189 (Fisher's exact test), Q value = 0.05
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
5Q LOSS MUTATED | 25 | 30 | 9 | 16 | 9 | 12 |
5Q LOSS WILD-TYPE | 9 | 6 | 10 | 11 | 10 | 3 |
P value = 0.0146 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
6P LOSS MUTATED | 1 | 2 | 2 | 0 | 1 | 3 | 4 |
6P LOSS WILD-TYPE | 42 | 25 | 10 | 24 | 7 | 20 | 9 |
P value = 0.00119 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
6Q LOSS MUTATED | 1 | 2 | 2 | 0 | 2 | 4 | 5 |
6Q LOSS WILD-TYPE | 42 | 25 | 10 | 24 | 6 | 19 | 8 |
P value = 0.0277 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
6Q LOSS MUTATED | 3 | 8 | 5 |
6Q LOSS WILD-TYPE | 67 | 30 | 37 |
P value = 0.0355 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
6Q LOSS MUTATED | 3 | 7 | 6 |
6Q LOSS WILD-TYPE | 66 | 29 | 39 |
P value = 0.0276 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
8P LOSS MUTATED | 0 | 0 | 0 | 5 | 3 |
8P LOSS WILD-TYPE | 45 | 8 | 10 | 32 | 15 |
P value = 0.00923 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
8P LOSS MUTATED | 0 | 4 | 4 |
8P LOSS WILD-TYPE | 51 | 21 | 38 |
P value = 0.0215 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
8P LOSS MUTATED | 1 | 0 | 3 | 2 | 0 | 6 | 0 |
8P LOSS WILD-TYPE | 33 | 30 | 30 | 20 | 8 | 16 | 1 |
P value = 0.0477 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
8P LOSS MUTATED | 1 | 0 | 1 | 3 | 1 | 3 | 3 |
8P LOSS WILD-TYPE | 42 | 27 | 11 | 21 | 7 | 20 | 10 |
P value = 0.00966 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
8P LOSS MUTATED | 1 | 3 | 8 |
8P LOSS WILD-TYPE | 50 | 54 | 34 |
P value = 0.00193 (Fisher's exact test), Q value = 0.0092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
8P LOSS MUTATED | 1 | 3 | 8 |
8P LOSS WILD-TYPE | 69 | 35 | 34 |
P value = 0.00739 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
8P LOSS MUTATED | 1 | 4 | 7 |
8P LOSS WILD-TYPE | 68 | 32 | 38 |
P value = 0.0163 (Fisher's exact test), Q value = 0.045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
8P LOSS MUTATED | 1 | 0 | 2 | 3 | 2 | 4 |
8P LOSS WILD-TYPE | 33 | 36 | 17 | 24 | 17 | 11 |
P value = 0.0145 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
8Q LOSS MUTATED | 0 | 3 | 1 |
8Q LOSS WILD-TYPE | 51 | 22 | 41 |
P value = 0.0116 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
8Q LOSS MUTATED | 0 | 0 | 0 | 1 | 0 | 4 | 0 |
8Q LOSS WILD-TYPE | 34 | 30 | 33 | 21 | 8 | 18 | 1 |
P value = 0.0119 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
8Q LOSS MUTATED | 0 | 0 | 0 | 3 | 0 | 0 | 2 |
8Q LOSS WILD-TYPE | 43 | 27 | 12 | 21 | 8 | 23 | 11 |
P value = 0.00158 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
8Q LOSS MUTATED | 0 | 0 | 5 |
8Q LOSS WILD-TYPE | 51 | 57 | 37 |
P value = 0.00256 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
8Q LOSS MUTATED | 0 | 0 | 5 |
8Q LOSS WILD-TYPE | 70 | 38 | 37 |
P value = 0.00247 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
8Q LOSS MUTATED | 0 | 0 | 5 |
8Q LOSS WILD-TYPE | 69 | 36 | 40 |
P value = 0.00291 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
8Q LOSS MUTATED | 0 | 0 | 0 | 2 | 0 | 3 |
8Q LOSS WILD-TYPE | 34 | 36 | 19 | 25 | 19 | 12 |
P value = 0.00055 (Fisher's exact test), Q value = 0.0033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
9P LOSS MUTATED | 14 | 18 | 31 | 1 |
9P LOSS WILD-TYPE | 34 | 16 | 23 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
9Q LOSS MUTATED | 10 | 15 | 33 | 0 |
9Q LOSS WILD-TYPE | 38 | 19 | 21 | 14 |
P value = 0.0178 (Fisher's exact test), Q value = 0.048
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
9Q LOSS MUTATED | 13 | 10 | 8 | 13 | 0 | 11 | 3 |
9Q LOSS WILD-TYPE | 30 | 17 | 4 | 11 | 8 | 12 | 10 |
P value = 0.00247 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
10P LOSS MUTATED | 19 | 12 | 38 | 8 |
10P LOSS WILD-TYPE | 29 | 22 | 16 | 6 |
P value = 0.0229 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
10P LOSS MUTATED | 18 | 10 | 25 | 24 |
10P LOSS WILD-TYPE | 27 | 10 | 9 | 27 |
P value = 0.00819 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
10P LOSS MUTATED | 16 | 3 | 4 | 24 | 14 |
10P LOSS WILD-TYPE | 29 | 5 | 6 | 13 | 4 |
P value = 0.00734 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
10P LOSS MUTATED | 18 | 15 | 28 |
10P LOSS WILD-TYPE | 33 | 10 | 14 |
P value = 0.031 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
10P LOSS MUTATED | 13 | 12 | 25 | 11 | 4 | 12 | 0 |
10P LOSS WILD-TYPE | 21 | 18 | 8 | 11 | 4 | 10 | 1 |
P value = 0.00553 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
10P LOSS MUTATED | 16 | 11 | 9 | 13 | 6 | 18 | 4 |
10P LOSS WILD-TYPE | 27 | 16 | 3 | 11 | 2 | 5 | 9 |
P value = 0.0421 (Fisher's exact test), Q value = 0.092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
10P LOSS MUTATED | 20 | 36 | 21 |
10P LOSS WILD-TYPE | 31 | 21 | 21 |
P value = 0.00062 (Fisher's exact test), Q value = 0.0037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
10P LOSS MUTATED | 27 | 29 | 21 |
10P LOSS WILD-TYPE | 43 | 9 | 21 |
P value = 0.00194 (Fisher's exact test), Q value = 0.0092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
10P LOSS MUTATED | 27 | 27 | 23 |
10P LOSS WILD-TYPE | 42 | 9 | 22 |
P value = 0.00285 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
10P LOSS MUTATED | 11 | 16 | 15 | 11 | 14 | 10 |
10P LOSS WILD-TYPE | 23 | 20 | 4 | 16 | 5 | 5 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
10Q LOSS MUTATED | 17 | 9 | 37 | 8 |
10Q LOSS WILD-TYPE | 31 | 25 | 17 | 6 |
P value = 0.0115 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
10Q LOSS MUTATED | 16 | 7 | 24 | 24 |
10Q LOSS WILD-TYPE | 29 | 13 | 10 | 27 |
P value = 0.0238 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
10Q LOSS MUTATED | 16 | 14 | 24 |
10Q LOSS WILD-TYPE | 35 | 11 | 18 |
P value = 0.00438 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
10Q LOSS MUTATED | 14 | 7 | 24 | 10 | 4 | 12 | 0 |
10Q LOSS WILD-TYPE | 20 | 23 | 9 | 12 | 4 | 10 | 1 |
P value = 0.00142 (Fisher's exact test), Q value = 0.0073
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
10Q LOSS MUTATED | 16 | 7 | 9 | 12 | 5 | 18 | 4 |
10Q LOSS WILD-TYPE | 27 | 20 | 3 | 12 | 3 | 5 | 9 |
P value = 0.00029 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
10Q LOSS MUTATED | 23 | 28 | 20 |
10Q LOSS WILD-TYPE | 47 | 10 | 22 |
P value = 0.00067 (Fisher's exact test), Q value = 0.0039
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
10Q LOSS MUTATED | 23 | 26 | 22 |
10Q LOSS WILD-TYPE | 46 | 10 | 23 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
10Q LOSS MUTATED | 10 | 13 | 15 | 9 | 13 | 11 |
10Q LOSS WILD-TYPE | 24 | 23 | 4 | 18 | 6 | 4 |
P value = 0.0441 (Fisher's exact test), Q value = 0.094
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
11P LOSS MUTATED | 33 | 17 | 22 | 27 |
11P LOSS WILD-TYPE | 12 | 3 | 12 | 24 |
P value = 0.00038 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
11P LOSS MUTATED | 32 | 22 | 9 | 12 | 4 | 18 | 2 |
11P LOSS WILD-TYPE | 11 | 5 | 3 | 12 | 4 | 5 | 11 |
P value = 0.00026 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
11P LOSS MUTATED | 37 | 45 | 17 |
11P LOSS WILD-TYPE | 14 | 12 | 25 |
P value = 0.00029 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
11P LOSS MUTATED | 54 | 28 | 17 |
11P LOSS WILD-TYPE | 16 | 10 | 25 |
P value = 0.00448 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
11P LOSS MUTATED | 53 | 25 | 21 |
11P LOSS WILD-TYPE | 16 | 11 | 24 |
P value = 0.00546 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
11P LOSS MUTATED | 25 | 29 | 15 | 10 | 12 | 8 |
11P LOSS WILD-TYPE | 9 | 7 | 4 | 17 | 7 | 7 |
P value = 0.00288 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
11Q LOSS MUTATED | 30 | 32 | 41 | 13 |
11Q LOSS WILD-TYPE | 18 | 2 | 13 | 1 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00062
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
11Q LOSS MUTATED | 27 | 30 | 27 | 14 | 7 | 11 | 0 |
11Q LOSS WILD-TYPE | 7 | 0 | 6 | 8 | 1 | 11 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
11Q LOSS MUTATED | 35 | 27 | 11 | 15 | 7 | 18 | 3 |
11Q LOSS WILD-TYPE | 8 | 0 | 1 | 9 | 1 | 5 | 10 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
11Q LOSS MUTATED | 43 | 51 | 22 |
11Q LOSS WILD-TYPE | 8 | 6 | 20 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00091
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
11Q LOSS MUTATED | 62 | 32 | 22 |
11Q LOSS WILD-TYPE | 8 | 6 | 20 |
P value = 0.00089 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
11Q LOSS MUTATED | 61 | 29 | 26 |
11Q LOSS WILD-TYPE | 8 | 7 | 19 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
11Q LOSS MUTATED | 26 | 36 | 16 | 12 | 15 | 11 |
11Q LOSS WILD-TYPE | 8 | 0 | 3 | 15 | 4 | 4 |
P value = 0.0157 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
13Q LOSS MUTATED | 33 | 32 | 39 | 9 |
13Q LOSS WILD-TYPE | 15 | 2 | 15 | 5 |
P value = 0.00047 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
13Q LOSS MUTATED | 24 | 30 | 26 | 16 | 4 | 12 | 1 |
13Q LOSS WILD-TYPE | 10 | 0 | 7 | 6 | 4 | 10 | 0 |
P value = 0.0012 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
13Q LOSS MUTATED | 31 | 27 | 11 | 14 | 6 | 17 | 7 |
13Q LOSS WILD-TYPE | 12 | 0 | 1 | 10 | 2 | 6 | 6 |
P value = 0.027 (Fisher's exact test), Q value = 0.066
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
13Q LOSS MUTATED | 42 | 46 | 25 |
13Q LOSS WILD-TYPE | 9 | 11 | 17 |
P value = 0.0232 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
13Q LOSS MUTATED | 58 | 30 | 25 |
13Q LOSS WILD-TYPE | 12 | 8 | 17 |
P value = 7e-04 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
13Q LOSS MUTATED | 23 | 35 | 14 | 14 | 15 | 12 |
13Q LOSS WILD-TYPE | 11 | 1 | 5 | 13 | 4 | 3 |
P value = 0.0241 (Fisher's exact test), Q value = 0.06
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
14Q LOSS MUTATED | 3 | 1 | 10 | 6 |
14Q LOSS WILD-TYPE | 42 | 19 | 24 | 45 |
P value = 0.0279 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
14Q LOSS MUTATED | 3 | 1 | 1 | 4 | 7 |
14Q LOSS WILD-TYPE | 42 | 7 | 9 | 33 | 11 |
P value = 0.00459 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
14Q LOSS MUTATED | 0 | 3 | 10 | 2 | 0 | 5 | 0 |
14Q LOSS WILD-TYPE | 34 | 27 | 23 | 20 | 8 | 17 | 1 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
14Q LOSS MUTATED | 0 | 3 | 0 | 5 | 0 | 10 | 2 |
14Q LOSS WILD-TYPE | 43 | 24 | 12 | 19 | 8 | 13 | 11 |
P value = 0.0367 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
14Q LOSS MUTATED | 2 | 11 | 7 |
14Q LOSS WILD-TYPE | 49 | 46 | 35 |
P value = 0.00322 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
14Q LOSS MUTATED | 3 | 10 | 7 |
14Q LOSS WILD-TYPE | 67 | 28 | 35 |
P value = 0.00238 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
14Q LOSS MUTATED | 3 | 10 | 7 |
14Q LOSS WILD-TYPE | 66 | 26 | 38 |
P value = 0.00089 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
14Q LOSS MUTATED | 0 | 3 | 6 | 2 | 4 | 5 |
14Q LOSS WILD-TYPE | 34 | 33 | 13 | 25 | 15 | 10 |
P value = 0.0176 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
15Q LOSS MUTATED | 10 | 1 | 14 | 4 |
15Q LOSS WILD-TYPE | 38 | 33 | 40 | 10 |
P value = 0.00026 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
15Q LOSS MUTATED | 3 | 0 | 12 | 14 |
15Q LOSS WILD-TYPE | 42 | 20 | 22 | 37 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
15Q LOSS MUTATED | 0 | 0 | 4 | 14 | 7 |
15Q LOSS WILD-TYPE | 45 | 8 | 6 | 23 | 11 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
15Q LOSS MUTATED | 0 | 10 | 15 |
15Q LOSS WILD-TYPE | 51 | 15 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
15Q LOSS MUTATED | 0 | 1 | 9 | 9 | 2 | 8 | 0 |
15Q LOSS WILD-TYPE | 34 | 29 | 24 | 13 | 6 | 14 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
15Q LOSS MUTATED | 0 | 1 | 3 | 7 | 4 | 8 | 6 |
15Q LOSS WILD-TYPE | 43 | 26 | 9 | 17 | 4 | 15 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
15Q LOSS MUTATED | 0 | 14 | 15 |
15Q LOSS WILD-TYPE | 51 | 43 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
15Q LOSS MUTATED | 1 | 13 | 15 |
15Q LOSS WILD-TYPE | 69 | 25 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
15Q LOSS MUTATED | 1 | 12 | 16 |
15Q LOSS WILD-TYPE | 68 | 24 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
15Q LOSS MUTATED | 0 | 1 | 4 | 8 | 9 | 7 |
15Q LOSS WILD-TYPE | 34 | 35 | 15 | 19 | 10 | 8 |
P value = 0.0111 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
16P LOSS MUTATED | 12 | 8 | 16 | 8 |
16P LOSS WILD-TYPE | 33 | 12 | 18 | 43 |
P value = 0.00305 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
16P LOSS MUTATED | 11 | 26 | 7 |
16P LOSS WILD-TYPE | 40 | 31 | 35 |
P value = 0.0113 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
16P LOSS MUTATED | 19 | 18 | 7 |
16P LOSS WILD-TYPE | 51 | 20 | 35 |
P value = 0.0186 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
16Q LOSS MUTATED | 11 | 15 | 16 | 9 |
16Q LOSS WILD-TYPE | 37 | 19 | 38 | 5 |
P value = 0.0109 (Fisher's exact test), Q value = 0.034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
16Q LOSS MUTATED | 12 | 28 | 11 |
16Q LOSS WILD-TYPE | 39 | 29 | 31 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
17P LOSS MUTATED | 4 | 20 | 9 | 4 |
17P LOSS WILD-TYPE | 44 | 14 | 45 | 10 |
P value = 0.0447 (Fisher's exact test), Q value = 0.095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
17P LOSS MUTATED | 17 | 2 | 1 | 7 | 1 |
17P LOSS WILD-TYPE | 28 | 6 | 9 | 30 | 17 |
P value = 0.00313 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
17P LOSS MUTATED | 19 | 1 | 8 |
17P LOSS WILD-TYPE | 32 | 24 | 34 |
P value = 0.00065 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
17P LOSS MUTATED | 9 | 17 | 4 | 4 | 0 | 3 | 0 |
17P LOSS WILD-TYPE | 25 | 13 | 29 | 18 | 8 | 19 | 1 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
17P LOSS MUTATED | 10 | 16 | 2 | 1 | 0 | 4 | 4 |
17P LOSS WILD-TYPE | 33 | 11 | 10 | 23 | 8 | 19 | 9 |
P value = 0.00334 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
17P LOSS MUTATED | 26 | 4 | 7 |
17P LOSS WILD-TYPE | 44 | 34 | 35 |
P value = 0.0016 (Fisher's exact test), Q value = 0.0081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
17P LOSS MUTATED | 26 | 3 | 8 |
17P LOSS WILD-TYPE | 43 | 33 | 37 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
17P LOSS MUTATED | 6 | 20 | 1 | 3 | 2 | 5 |
17P LOSS WILD-TYPE | 28 | 16 | 18 | 24 | 17 | 10 |
P value = 0.00397 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
17Q LOSS MUTATED | 1 | 8 | 6 | 4 |
17Q LOSS WILD-TYPE | 47 | 26 | 48 | 10 |
P value = 0.0281 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
17Q LOSS MUTATED | 5 | 8 | 0 | 0 | 0 | 4 | 2 |
17Q LOSS WILD-TYPE | 38 | 19 | 12 | 24 | 8 | 19 | 11 |
P value = 0.0487 (Fisher's exact test), Q value = 0.1
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
18P LOSS MUTATED | 32 | 19 | 30 | 37 |
18P LOSS WILD-TYPE | 13 | 1 | 4 | 14 |
P value = 0.00587 (Fisher's exact test), Q value = 0.021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
18P LOSS MUTATED | 38 | 52 | 28 |
18P LOSS WILD-TYPE | 13 | 5 | 14 |
P value = 0.0196 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
18P LOSS MUTATED | 55 | 35 | 28 |
18P LOSS WILD-TYPE | 15 | 3 | 14 |
P value = 0.0369 (Fisher's exact test), Q value = 0.083
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
18P LOSS MUTATED | 24 | 31 | 16 | 16 | 18 | 13 |
18P LOSS WILD-TYPE | 10 | 5 | 3 | 11 | 1 | 2 |
P value = 0.0293 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
18Q LOSS MUTATED | 33 | 32 | 45 | 12 |
18Q LOSS WILD-TYPE | 15 | 2 | 9 | 2 |
P value = 0.0175 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
18Q LOSS MUTATED | 41 | 52 | 29 |
18Q LOSS WILD-TYPE | 10 | 5 | 13 |
P value = 0.0309 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
18Q LOSS MUTATED | 58 | 35 | 29 |
18Q LOSS WILD-TYPE | 12 | 3 | 13 |
P value = 0.00803 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
18Q LOSS MUTATED | 24 | 34 | 16 | 17 | 18 | 13 |
18Q LOSS WILD-TYPE | 10 | 2 | 3 | 10 | 1 | 2 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
19P LOSS MUTATED | 11 | 2 | 31 | 5 |
19P LOSS WILD-TYPE | 37 | 32 | 23 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
19P LOSS MUTATED | 4 | 1 | 23 | 21 |
19P LOSS WILD-TYPE | 41 | 19 | 11 | 30 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
19P LOSS MUTATED | 2 | 2 | 4 | 21 | 11 |
19P LOSS WILD-TYPE | 43 | 6 | 6 | 16 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
19P LOSS MUTATED | 2 | 14 | 24 |
19P LOSS WILD-TYPE | 49 | 11 | 18 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
19P LOSS MUTATED | 0 | 2 | 21 | 12 | 1 | 13 | 0 |
19P LOSS WILD-TYPE | 34 | 28 | 12 | 10 | 7 | 9 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
19P LOSS MUTATED | 0 | 2 | 9 | 12 | 5 | 15 | 6 |
19P LOSS WILD-TYPE | 43 | 25 | 3 | 12 | 3 | 8 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
19P LOSS MUTATED | 1 | 27 | 21 |
19P LOSS WILD-TYPE | 50 | 30 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
19P LOSS MUTATED | 2 | 26 | 21 |
19P LOSS WILD-TYPE | 68 | 12 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
19P LOSS MUTATED | 2 | 23 | 24 |
19P LOSS WILD-TYPE | 67 | 13 | 21 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
19P LOSS MUTATED | 0 | 2 | 12 | 12 | 13 | 10 |
19P LOSS WILD-TYPE | 34 | 34 | 7 | 15 | 6 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
19Q LOSS MUTATED | 11 | 1 | 35 | 6 |
19Q LOSS WILD-TYPE | 37 | 33 | 19 | 8 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
19Q LOSS MUTATED | 4 | 0 | 27 | 22 |
19Q LOSS WILD-TYPE | 41 | 20 | 7 | 29 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
19Q LOSS MUTATED | 1 | 2 | 4 | 22 | 14 |
19Q LOSS WILD-TYPE | 44 | 6 | 6 | 15 | 4 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
19Q LOSS MUTATED | 1 | 14 | 28 |
19Q LOSS WILD-TYPE | 50 | 11 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
19Q LOSS MUTATED | 0 | 1 | 25 | 13 | 1 | 13 | 0 |
19Q LOSS WILD-TYPE | 34 | 29 | 8 | 9 | 7 | 9 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
19Q LOSS MUTATED | 0 | 1 | 9 | 13 | 5 | 19 | 6 |
19Q LOSS WILD-TYPE | 43 | 26 | 3 | 11 | 3 | 4 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
19Q LOSS MUTATED | 1 | 30 | 22 |
19Q LOSS WILD-TYPE | 50 | 27 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
19Q LOSS MUTATED | 1 | 30 | 22 |
19Q LOSS WILD-TYPE | 69 | 8 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
19Q LOSS MUTATED | 1 | 27 | 25 |
19Q LOSS WILD-TYPE | 68 | 9 | 20 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
19Q LOSS MUTATED | 0 | 1 | 14 | 13 | 15 | 10 |
19Q LOSS WILD-TYPE | 34 | 35 | 5 | 14 | 4 | 5 |
P value = 0.0307 (Fisher's exact test), Q value = 0.072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
20P LOSS MUTATED | 5 | 17 | 7 |
20P LOSS WILD-TYPE | 46 | 40 | 35 |
P value = 0.00912 (Fisher's exact test), Q value = 0.029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
20P LOSS MUTATED | 2 | 9 | 9 | 5 | 3 | 1 |
20P LOSS WILD-TYPE | 32 | 27 | 10 | 22 | 16 | 14 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
22Q LOSS MUTATED | 7 | 3 | 26 | 7 |
22Q LOSS WILD-TYPE | 41 | 31 | 28 | 7 |
P value = 5e-05 (Fisher's exact test), Q value = 0.00046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
22Q LOSS MUTATED | 5 | 3 | 19 | 16 |
22Q LOSS WILD-TYPE | 40 | 17 | 15 | 35 |
P value = 0.00166 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 45 | 8 | 10 | 37 | 18 |
22Q LOSS MUTATED | 5 | 1 | 4 | 16 | 9 |
22Q LOSS WILD-TYPE | 40 | 7 | 6 | 21 | 9 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 25 | 42 |
22Q LOSS MUTATED | 5 | 14 | 16 |
22Q LOSS WILD-TYPE | 46 | 11 | 26 |
P value = 4e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
22Q LOSS MUTATED | 3 | 2 | 19 | 8 | 2 | 9 | 0 |
22Q LOSS WILD-TYPE | 31 | 28 | 14 | 14 | 6 | 13 | 1 |
P value = 4e-05 (Fisher's exact test), Q value = 4e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 43 | 27 | 12 | 24 | 8 | 23 | 13 |
22Q LOSS MUTATED | 4 | 2 | 7 | 10 | 4 | 12 | 4 |
22Q LOSS WILD-TYPE | 39 | 25 | 5 | 14 | 4 | 11 | 9 |
P value = 0.00014 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
22Q LOSS MUTATED | 4 | 22 | 17 |
22Q LOSS WILD-TYPE | 47 | 35 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
22Q LOSS MUTATED | 6 | 20 | 17 |
22Q LOSS WILD-TYPE | 64 | 18 | 25 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 69 | 36 | 45 |
22Q LOSS MUTATED | 6 | 18 | 19 |
22Q LOSS WILD-TYPE | 63 | 18 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
22Q LOSS MUTATED | 3 | 3 | 13 | 10 | 7 | 7 |
22Q LOSS WILD-TYPE | 31 | 33 | 6 | 17 | 12 | 8 |
P value = 0.00316 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
XP LOSS MUTATED | 2 | 7 | 16 | 4 |
XP LOSS WILD-TYPE | 46 | 27 | 38 | 10 |
P value = 0.0052 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
XP LOSS MUTATED | 3 | 6 | 4 | 16 |
XP LOSS WILD-TYPE | 42 | 14 | 30 | 35 |
P value = 0.0449 (Fisher's exact test), Q value = 0.095
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
XP LOSS MUTATED | 4 | 7 | 5 | 10 | 0 | 3 | 0 |
XP LOSS WILD-TYPE | 30 | 23 | 28 | 12 | 8 | 19 | 1 |
P value = 0.0167 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
XP LOSS MUTATED | 2 | 9 | 3 | 10 | 1 | 4 |
XP LOSS WILD-TYPE | 32 | 27 | 16 | 17 | 18 | 11 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 48 | 34 | 54 | 14 |
XQ LOSS MUTATED | 0 | 7 | 18 | 3 |
XQ LOSS WILD-TYPE | 48 | 27 | 36 | 11 |
P value = 0.00139 (Fisher's exact test), Q value = 0.0072
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 20 | 34 | 51 |
XQ LOSS MUTATED | 2 | 6 | 4 | 16 |
XQ LOSS WILD-TYPE | 43 | 14 | 30 | 35 |
P value = 0.0227 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 |
---|---|---|---|---|---|---|---|
ALL | 34 | 30 | 33 | 22 | 8 | 22 | 1 |
XQ LOSS MUTATED | 4 | 7 | 3 | 10 | 0 | 4 | 0 |
XQ LOSS WILD-TYPE | 30 | 23 | 30 | 12 | 8 | 18 | 1 |
P value = 0.0235 (Fisher's exact test), Q value = 0.059
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 51 | 57 | 42 |
XQ LOSS MUTATED | 7 | 7 | 14 |
XQ LOSS WILD-TYPE | 44 | 50 | 28 |
P value = 0.0115 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 70 | 38 | 42 |
XQ LOSS MUTATED | 11 | 3 | 14 |
XQ LOSS WILD-TYPE | 59 | 35 | 28 |
P value = 0.00518 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 34 | 36 | 19 | 27 | 19 | 15 |
XQ LOSS MUTATED | 2 | 9 | 4 | 10 | 0 | 3 |
XQ LOSS WILD-TYPE | 32 | 27 | 15 | 17 | 19 | 12 |
-
Copy number data file = broad_values_by_arm.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/TGCT-TP/22533661/transformed.cor.cli.txt
-
Molecular subtypes file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/TGCT-TP/22541961/TGCT-TP.transferedmergedcluster.txt
-
Number of patients = 150
-
Number of significantly arm-level cnvs = 75
-
Number of molecular subtypes = 10
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.