This pipeline computes the correlation between significant arm-level copy number variations (cnvs) and molecular subtypes.
Testing the association between copy number variation 51 arm-level events and 10 molecular subtypes across 123 patients, 308 significant findings detected with P value < 0.05 and Q value < 0.25.
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1p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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1q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q gain cnv correlated to 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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5p gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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5q gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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7q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8p gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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8q gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12p gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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12q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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14q gain cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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15q gain cnv correlated to 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17q gain cnv correlated to 'CN_CNMF' and 'MRNASEQ_CHIERARCHICAL'.
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18p gain cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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18q gain cnv correlated to 'MRNASEQ_CHIERARCHICAL'.
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20p gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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20q gain cnv correlated to 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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22q gain cnv correlated to 'METHLYATION_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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xq gain cnv correlated to 'METHLYATION_CNMF' and 'MIRSEQ_MATURE_CNMF'.
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1p loss cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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3p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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3q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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4p loss cnv correlated to 'MIRSEQ_MATURE_CNMF'.
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4q loss cnv correlated to 'MIRSEQ_MATURE_CNMF' and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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6q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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9p loss cnv correlated to 'CN_CNMF', 'MRNASEQ_CNMF', and 'MRNASEQ_CHIERARCHICAL'.
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10p loss cnv correlated to 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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11p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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11q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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12q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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13q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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16p loss cnv correlated to 'METHLYATION_CNMF' and 'RPPA_CHIERARCHICAL'.
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16q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CHIERARCHICAL', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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17q loss cnv correlated to 'METHLYATION_CNMF' and 'RPPA_CHIERARCHICAL'.
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18p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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18q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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19p loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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19q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_CHIERARCHICAL'.
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21q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', 'MIRSEQ_MATURE_CNMF', and 'MIRSEQ_MATURE_CHIERARCHICAL'.
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22q loss cnv correlated to 'CN_CNMF', 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CHIERARCHICAL', and 'MIRSEQ_MATURE_CNMF'.
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xp loss cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MRNASEQ_CNMF', 'MRNASEQ_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
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xq loss cnv correlated to 'METHLYATION_CNMF', 'RPPA_CHIERARCHICAL', 'MIRSEQ_CNMF', and 'MIRSEQ_MATURE_CNMF'.
Clinical Features |
CN CNMF |
METHLYATION CNMF |
RPPA CNMF |
RPPA CHIERARCHICAL |
MRNASEQ CNMF |
MRNASEQ CHIERARCHICAL |
MIRSEQ CNMF |
MIRSEQ CHIERARCHICAL |
MIRSEQ MATURE CNMF |
MIRSEQ MATURE CHIERARCHICAL |
||
nCNV (%) | nWild-Type | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | Fisher's exact test | |
1q gain | 23 (19%) | 100 |
0.0004 (0.00234) |
1e-05 (0.000159) |
0.00043 (0.00249) |
1e-05 (0.000159) |
1e-05 (0.000159) |
1e-05 (0.000159) |
1e-05 (0.000159) |
1e-05 (0.000159) |
1e-05 (0.000159) |
1e-05 (0.000159) |
7p gain | 16 (13%) | 107 |
0.0007 (0.00343) |
1e-05 (0.000159) |
0.0247 (0.049) |
0.00389 (0.0119) |
1e-05 (0.000159) |
1e-05 (0.000159) |
1e-05 (0.000159) |
8e-05 (0.00068) |
1e-05 (0.000159) |
3e-05 (0.000356) |
7q gain | 16 (13%) | 107 |
0.00063 (0.00321) |
1e-05 (0.000159) |
0.0251 (0.0491) |
0.00413 (0.0125) |
3e-05 (0.000356) |
1e-05 (0.000159) |
1e-05 (0.000159) |
0.0001 (0.000797) |
1e-05 (0.000159) |
5e-05 (5e-04) |
3p loss | 12 (10%) | 111 |
0.00369 (0.0115) |
1e-05 (0.000159) |
0.0381 (0.0666) |
1e-05 (0.000159) |
0.00106 (0.00454) |
0.00083 (0.00381) |
0.00045 (0.00255) |
0.00455 (0.0136) |
1e-05 (0.000159) |
0.00099 (0.00435) |
6p loss | 21 (17%) | 102 |
0.00055 (0.00289) |
1e-05 (0.000159) |
6e-05 (0.000556) |
4e-05 (0.000425) |
1e-05 (0.000159) |
2e-05 (0.000283) |
1e-05 (0.000159) |
0.00015 (0.00112) |
1e-05 (0.000159) |
3e-05 (0.000356) |
6q loss | 20 (16%) | 103 |
0.00027 (0.00177) |
1e-05 (0.000159) |
0.00024 (0.00161) |
7e-05 (0.000626) |
3e-05 (0.000356) |
0.00013 (0.00099) |
0.00029 (0.00187) |
0.0016 (0.00628) |
1e-05 (0.000159) |
0.00094 (0.00421) |
14q gain | 13 (11%) | 110 |
0.00036 (0.00219) |
1e-05 (0.000159) |
0.268 (0.317) |
0.0298 (0.0556) |
2e-05 (0.000283) |
6e-05 (0.000556) |
4e-05 (0.000425) |
0.00011 (0.00085) |
1e-05 (0.000159) |
4e-05 (0.000425) |
20p gain | 10 (8%) | 113 |
0.175 (0.223) |
0.00076 (0.00359) |
0.0051 (0.0147) |
0.00023 (0.00156) |
0.00151 (0.00597) |
0.0003 (0.00191) |
0.0284 (0.0539) |
0.0115 (0.0265) |
5e-05 (5e-04) |
0.0176 (0.0367) |
20q gain | 10 (8%) | 113 |
0.173 (0.221) |
0.0006 (0.00309) |
0.00507 (0.0147) |
0.00019 (0.00133) |
0.00144 (0.00578) |
0.00039 (0.00231) |
0.0284 (0.0539) |
0.0102 (0.0245) |
5e-05 (5e-04) |
0.0174 (0.0364) |
11p loss | 9 (7%) | 114 |
0.00978 (0.0236) |
0.00011 (0.00085) |
0.0162 (0.0354) |
0.00118 (0.00489) |
0.0091 (0.0225) |
0.00695 (0.0186) |
0.00369 (0.0115) |
0.0511 (0.0835) |
0.00017 (0.00122) |
0.0106 (0.0253) |
11q loss | 7 (6%) | 116 |
0.0194 (0.04) |
0.00075 (0.00357) |
0.0475 (0.0801) |
0.00616 (0.0168) |
0.0358 (0.0637) |
0.0143 (0.0321) |
0.011 (0.0257) |
0.113 (0.16) |
0.00266 (0.00893) |
0.0261 (0.0508) |
12p loss | 8 (7%) | 115 |
0.00287 (0.00926) |
0.00555 (0.0157) |
0.0171 (0.0361) |
0.00246 (0.00875) |
0.00883 (0.0221) |
0.014 (0.0318) |
0.00674 (0.0181) |
0.0531 (0.0852) |
0.00926 (0.0227) |
0.0159 (0.0348) |
12q loss | 7 (6%) | 116 |
0.00798 (0.0202) |
0.00109 (0.00456) |
0.017 (0.0361) |
0.00282 (0.00925) |
0.00884 (0.0221) |
0.0135 (0.0306) |
0.0113 (0.0263) |
0.121 (0.167) |
0.00264 (0.00893) |
0.0364 (0.0641) |
16q loss | 13 (11%) | 110 |
0.00084 (0.00382) |
1e-05 (0.000159) |
0.0783 (0.117) |
4e-05 (0.000425) |
3e-05 (0.000356) |
1e-05 (0.000159) |
0.0351 (0.0633) |
2e-05 (0.000283) |
0.00074 (0.00356) |
0.00166 (0.00646) |
17p loss | 14 (11%) | 109 |
0.0098 (0.0236) |
0.00278 (0.00921) |
0.00482 (0.0142) |
0.00021 (0.00145) |
0.0192 (0.0398) |
0.00109 (0.00456) |
0.269 (0.318) |
0.00197 (0.00744) |
0.00236 (0.00848) |
0.0287 (0.0541) |
21q loss | 9 (7%) | 114 |
0.00699 (0.0186) |
7e-05 (0.000626) |
0.0169 (0.0361) |
0.00256 (0.00893) |
0.00661 (0.0179) |
0.00711 (0.0187) |
0.00389 (0.0119) |
0.0518 (0.0842) |
0.00016 (0.00118) |
0.00776 (0.02) |
5p gain | 11 (9%) | 112 |
0.0952 (0.138) |
2e-05 (0.000283) |
0.0656 (0.102) |
0.003 (0.00962) |
0.00185 (0.00709) |
0.00141 (0.00575) |
0.00036 (0.00219) |
0.013 (0.0298) |
1e-05 (0.000159) |
0.00224 (0.00822) |
5q gain | 9 (7%) | 114 |
0.245 (0.292) |
8e-05 (0.00068) |
0.143 (0.191) |
0.00937 (0.0229) |
0.00898 (0.0223) |
0.00715 (0.0187) |
0.001 (0.00436) |
0.0163 (0.0354) |
6e-05 (0.000556) |
0.00591 (0.0166) |
8p gain | 12 (10%) | 111 |
0.0995 (0.142) |
9e-05 (0.000752) |
0.4 (0.444) |
0.0043 (0.0129) |
0.00046 (0.00258) |
0.00017 (0.00122) |
0.00034 (0.00211) |
0.00185 (0.00709) |
0.0001 (0.000797) |
0.00077 (0.0036) |
8q gain | 12 (10%) | 111 |
0.0993 (0.142) |
3e-05 (0.000356) |
0.404 (0.446) |
0.00407 (0.0124) |
0.0005 (0.00271) |
0.00019 (0.00133) |
0.00054 (0.00287) |
0.00195 (0.00742) |
6e-05 (0.000556) |
0.0007 (0.00343) |
9p gain | 11 (9%) | 112 |
0.00027 (0.00177) |
0.00072 (0.0035) |
0.545 (0.59) |
0.384 (0.43) |
0.00039 (0.00231) |
0.00095 (0.00421) |
4e-05 (0.000425) |
0.00545 (0.0155) |
0.0001 (0.000797) |
0.00268 (0.00893) |
9q gain | 11 (9%) | 112 |
0.00032 (0.00201) |
0.00057 (0.00297) |
0.542 (0.589) |
0.386 (0.431) |
0.00051 (0.00274) |
0.00078 (0.00362) |
1e-05 (0.000159) |
0.00609 (0.0168) |
8e-05 (0.00068) |
0.00283 (0.00925) |
3q loss | 7 (6%) | 116 |
0.0361 (0.064) |
0.002 (0.0075) |
0.0872 (0.128) |
0.00107 (0.00455) |
0.0354 (0.0635) |
0.0317 (0.0578) |
0.0113 (0.0262) |
0.0851 (0.126) |
0.00259 (0.00893) |
0.0266 (0.0516) |
18p loss | 7 (6%) | 116 |
0.0473 (0.0801) |
0.0358 (0.0637) |
0.0169 (0.0361) |
0.0974 (0.14) |
0.0347 (0.0628) |
0.0318 (0.0578) |
0.0037 (0.0115) |
0.0955 (0.138) |
0.00247 (0.00875) |
0.025 (0.049) |
18q loss | 7 (6%) | 116 |
0.0486 (0.0809) |
0.0363 (0.0641) |
0.0174 (0.0364) |
0.0986 (0.142) |
0.0357 (0.0637) |
0.0319 (0.0578) |
0.00382 (0.0118) |
0.0961 (0.139) |
0.00217 (0.00802) |
0.0249 (0.049) |
12p gain | 4 (3%) | 119 |
0.0282 (0.0538) |
0.00796 (0.0202) |
0.192 (0.24) |
0.0286 (0.0541) |
0.00489 (0.0143) |
0.00232 (0.00839) |
0.114 (0.161) |
0.0268 (0.0517) |
0.0491 (0.0814) |
0.147 (0.195) |
12q gain | 4 (3%) | 119 |
0.0281 (0.0538) |
0.0078 (0.02) |
0.194 (0.242) |
0.0304 (0.0562) |
0.00471 (0.014) |
0.00226 (0.00823) |
0.116 (0.162) |
0.0274 (0.0527) |
0.0478 (0.0802) |
0.148 (0.195) |
15q gain | 12 (10%) | 111 |
0.244 (0.292) |
0.00091 (0.00411) |
0.887 (0.93) |
0.666 (0.706) |
0.0213 (0.0432) |
0.00918 (0.0226) |
0.00266 (0.00893) |
0.0215 (0.0435) |
0.00069 (0.00343) |
0.0157 (0.0345) |
1p loss | 5 (4%) | 118 |
0.151 (0.198) |
0.00712 (0.0187) |
0.374 (0.421) |
0.0144 (0.0321) |
0.00775 (0.02) |
0.0237 (0.0473) |
0.0399 (0.0693) |
0.231 (0.28) |
0.0317 (0.0578) |
0.126 (0.174) |
xp loss | 8 (7%) | 115 |
0.14 (0.188) |
0.00574 (0.0162) |
0.521 (0.568) |
0.0249 (0.049) |
0.0197 (0.0406) |
0.0134 (0.0306) |
0.0171 (0.0361) |
0.137 (0.186) |
0.0005 (0.00271) |
0.109 (0.155) |
1p gain | 6 (5%) | 117 |
0.0109 (0.0255) |
0.00738 (0.0192) |
0.095 (0.138) |
0.131 (0.179) |
0.0526 (0.0848) |
0.0212 (0.0432) |
0.0228 (0.0457) |
0.176 (0.223) |
0.00808 (0.0204) |
0.0643 (0.101) |
13q loss | 14 (11%) | 109 |
0.00501 (0.0146) |
0.00068 (0.00343) |
0.00611 (0.0168) |
0.0407 (0.0701) |
0.0702 (0.108) |
0.0501 (0.0826) |
0.289 (0.339) |
0.58 (0.625) |
0.00203 (0.00756) |
0.345 (0.394) |
19p loss | 3 (2%) | 120 |
0.00673 (0.0181) |
0.00268 (0.00893) |
0.00137 (0.00563) |
0.00047 (0.00261) |
0.234 (0.282) |
0.00962 (0.0234) |
0.0774 (0.116) |
0.0589 (0.0931) |
||
19q loss | 3 (2%) | 120 |
0.00595 (0.0166) |
0.00287 (0.00926) |
0.00143 (0.00578) |
0.00045 (0.00255) |
0.231 (0.28) |
0.0105 (0.025) |
0.0754 (0.115) |
0.0593 (0.0934) |
||
22q loss | 13 (11%) | 110 |
3e-05 (0.000356) |
0.0108 (0.0255) |
0.105 (0.149) |
0.0404 (0.0699) |
0.0896 (0.131) |
0.0431 (0.0741) |
0.325 (0.38) |
0.332 (0.384) |
0.006 (0.0166) |
0.331 (0.383) |
xq loss | 5 (4%) | 118 |
0.147 (0.195) |
0.0157 (0.0345) |
0.14 (0.188) |
0.00263 (0.00893) |
0.0705 (0.108) |
0.0917 (0.134) |
0.0399 (0.0693) |
0.229 (0.28) |
0.0301 (0.056) |
0.13 (0.178) |
3q gain | 5 (4%) | 118 |
0.755 (0.795) |
0.374 (0.421) |
0.0564 (0.0897) |
0.0142 (0.032) |
0.211 (0.261) |
0.0373 (0.0653) |
0.744 (0.786) |
0.00513 (0.0147) |
0.165 (0.214) |
0.243 (0.292) |
9p loss | 4 (3%) | 119 |
0.00145 (0.00578) |
0.0752 (0.115) |
0.189 (0.237) |
0.201 (0.25) |
0.0217 (0.0436) |
0.00361 (0.0114) |
1 (1.00) |
0.0589 (0.0931) |
0.689 (0.729) |
0.336 (0.388) |
10p loss | 3 (2%) | 120 |
0.0772 (0.116) |
0.109 (0.155) |
0.0212 (0.0432) |
0.0217 (0.0436) |
1 (1.00) |
0.0149 (0.0331) |
0.613 (0.655) |
0.554 (0.599) |
||
17q gain | 7 (6%) | 116 |
0.00106 (0.00454) |
0.124 (0.171) |
0.0869 (0.128) |
0.138 (0.187) |
0.0504 (0.0826) |
0.00353 (0.0113) |
0.796 (0.837) |
0.0677 (0.105) |
0.182 (0.231) |
0.393 (0.437) |
22q gain | 4 (3%) | 119 |
0.0816 (0.121) |
0.0166 (0.0357) |
0.137 (0.186) |
0.185 (0.234) |
0.115 (0.161) |
0.528 (0.574) |
0.0491 (0.0814) |
0.146 (0.195) |
||
xq gain | 4 (3%) | 119 |
0.0812 (0.121) |
0.0166 (0.0357) |
0.138 (0.187) |
0.185 (0.234) |
0.0541 (0.0865) |
0.315 (0.369) |
0.0476 (0.0801) |
0.252 (0.3) |
||
4q loss | 4 (3%) | 119 |
0.341 (0.392) |
0.388 (0.432) |
0.139 (0.187) |
0.186 (0.234) |
0.166 (0.214) |
0.118 (0.164) |
0.0482 (0.0806) |
0.0435 (0.0745) |
||
16p loss | 5 (4%) | 118 |
0.124 (0.171) |
0.0452 (0.0771) |
0.374 (0.421) |
0.0144 (0.0322) |
0.213 (0.263) |
0.115 (0.162) |
0.158 (0.206) |
0.576 (0.621) |
0.165 (0.214) |
0.343 (0.392) |
17q loss | 6 (5%) | 117 |
0.0761 (0.115) |
0.0455 (0.0774) |
0.139 (0.187) |
0.00257 (0.00893) |
0.343 (0.392) |
0.147 (0.195) |
0.216 (0.266) |
0.234 (0.282) |
0.116 (0.162) |
0.206 (0.255) |
18p gain | 3 (2%) | 120 |
0.166 (0.214) |
0.0524 (0.0848) |
0.0663 (0.103) |
0.0293 (0.055) |
0.23 (0.28) |
0.285 (0.335) |
0.0756 (0.115) |
0.438 (0.482) |
||
18q gain | 3 (2%) | 120 |
0.167 (0.214) |
0.0517 (0.0842) |
0.0656 (0.102) |
0.0302 (0.0561) |
0.231 (0.28) |
0.285 (0.335) |
0.0765 (0.115) |
0.44 (0.482) |
||
4p loss | 5 (4%) | 118 |
0.404 (0.446) |
0.222 (0.272) |
0.0502 (0.0826) |
0.0653 (0.102) |
0.158 (0.206) |
0.385 (0.43) |
0.0309 (0.0569) |
0.228 (0.278) |
||
19p gain | 3 (2%) | 120 |
0.256 (0.304) |
0.151 (0.198) |
0.354 (0.403) |
0.327 (0.381) |
0.0547 (0.0872) |
0.614 (0.655) |
0.0758 (0.115) |
0.439 (0.482) |
||
19q gain | 3 (2%) | 120 |
0.256 (0.304) |
0.152 (0.199) |
0.355 (0.403) |
0.329 (0.382) |
0.0527 (0.0849) |
0.613 (0.655) |
0.0768 (0.116) |
0.441 (0.482) |
||
21q gain | 3 (2%) | 120 |
0.168 (0.215) |
0.38 (0.427) |
0.369 (0.419) |
0.204 (0.253) |
0.493 (0.538) |
0.187 (0.235) |
0.658 (0.7) |
0.342 (0.392) |
0.614 (0.655) |
0.62 (0.66) |
P value = 0.0109 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
1P GAIN MUTATED | 2 | 0 | 4 | 0 | 0 |
1P GAIN WILD-TYPE | 34 | 27 | 15 | 31 | 10 |
P value = 0.00738 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
1P GAIN MUTATED | 0 | 0 | 4 | 2 | 0 | 0 | 0 | 0 |
1P GAIN WILD-TYPE | 37 | 23 | 15 | 8 | 18 | 8 | 2 | 6 |
P value = 0.0212 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
1P GAIN MUTATED | 4 | 0 | 0 | 2 |
1P GAIN WILD-TYPE | 43 | 42 | 20 | 8 |
P value = 0.0228 (Fisher's exact test), Q value = 0.046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
1P GAIN MUTATED | 5 | 0 | 1 | 0 |
1P GAIN WILD-TYPE | 51 | 61 | 4 | 1 |
P value = 0.00808 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
1P GAIN MUTATED | 0 | 0 | 6 | 0 |
1P GAIN WILD-TYPE | 28 | 51 | 37 | 1 |
P value = 4e-04 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
1Q GAIN MUTATED | 12 | 0 | 6 | 2 | 3 |
1Q GAIN WILD-TYPE | 24 | 27 | 13 | 29 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
1Q GAIN MUTATED | 1 | 0 | 14 | 8 | 0 | 0 | 0 | 0 |
1Q GAIN WILD-TYPE | 36 | 23 | 5 | 2 | 18 | 8 | 2 | 6 |
P value = 0.00043 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
1Q GAIN MUTATED | 13 | 1 | 3 |
1Q GAIN WILD-TYPE | 18 | 24 | 31 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
1Q GAIN MUTATED | 0 | 0 | 4 | 13 |
1Q GAIN WILD-TYPE | 16 | 23 | 27 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
1Q GAIN MUTATED | 15 | 0 | 0 | 8 |
1Q GAIN WILD-TYPE | 30 | 30 | 30 | 6 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
1Q GAIN MUTATED | 16 | 0 | 0 | 7 |
1Q GAIN WILD-TYPE | 31 | 42 | 20 | 3 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
1Q GAIN MUTATED | 19 | 0 | 4 | 0 |
1Q GAIN WILD-TYPE | 37 | 61 | 1 | 1 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
1Q GAIN MUTATED | 8 | 0 | 10 | 5 | 0 | 0 |
1Q GAIN WILD-TYPE | 19 | 18 | 18 | 2 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
1Q GAIN MUTATED | 0 | 0 | 22 | 1 |
1Q GAIN WILD-TYPE | 28 | 51 | 21 | 0 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
1Q GAIN MUTATED | 7 | 0 | 16 | 0 |
1Q GAIN WILD-TYPE | 20 | 33 | 19 | 28 |
P value = 0.0142 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
3Q GAIN MUTATED | 0 | 0 | 0 | 3 |
3Q GAIN WILD-TYPE | 16 | 23 | 31 | 17 |
P value = 0.0373 (Fisher's exact test), Q value = 0.065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
3Q GAIN MUTATED | 2 | 0 | 1 | 2 |
3Q GAIN WILD-TYPE | 45 | 42 | 19 | 8 |
P value = 0.00513 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
3Q GAIN MUTATED | 0 | 0 | 1 | 2 | 2 | 0 |
3Q GAIN WILD-TYPE | 27 | 18 | 27 | 5 | 14 | 27 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
5P GAIN MUTATED | 0 | 0 | 8 | 2 | 0 | 0 | 0 | 1 |
5P GAIN WILD-TYPE | 37 | 23 | 11 | 8 | 18 | 8 | 2 | 5 |
P value = 0.003 (Fisher's exact test), Q value = 0.0096
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
5P GAIN MUTATED | 1 | 0 | 1 | 6 |
5P GAIN WILD-TYPE | 15 | 23 | 30 | 14 |
P value = 0.00185 (Fisher's exact test), Q value = 0.0071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
5P GAIN MUTATED | 8 | 0 | 0 | 3 |
5P GAIN WILD-TYPE | 37 | 30 | 30 | 11 |
P value = 0.00141 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
5P GAIN MUTATED | 9 | 0 | 0 | 2 |
5P GAIN WILD-TYPE | 38 | 42 | 20 | 8 |
P value = 0.00036 (Fisher's exact test), Q value = 0.0022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
5P GAIN MUTATED | 9 | 0 | 2 | 0 |
5P GAIN WILD-TYPE | 47 | 61 | 3 | 1 |
P value = 0.013 (Fisher's exact test), Q value = 0.03
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
5P GAIN MUTATED | 6 | 0 | 4 | 1 | 0 | 0 |
5P GAIN WILD-TYPE | 21 | 18 | 24 | 6 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
5P GAIN MUTATED | 0 | 0 | 10 | 1 |
5P GAIN WILD-TYPE | 28 | 51 | 33 | 0 |
P value = 0.00224 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
5P GAIN MUTATED | 5 | 0 | 6 | 0 |
5P GAIN WILD-TYPE | 22 | 33 | 29 | 28 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
5Q GAIN MUTATED | 0 | 0 | 7 | 1 | 0 | 0 | 0 | 1 |
5Q GAIN WILD-TYPE | 37 | 23 | 12 | 9 | 18 | 8 | 2 | 5 |
P value = 0.00937 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
5Q GAIN MUTATED | 1 | 0 | 1 | 5 |
5Q GAIN WILD-TYPE | 15 | 23 | 30 | 15 |
P value = 0.00898 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
5Q GAIN MUTATED | 7 | 0 | 0 | 2 |
5Q GAIN WILD-TYPE | 38 | 30 | 30 | 12 |
P value = 0.00715 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
5Q GAIN MUTATED | 8 | 0 | 0 | 1 |
5Q GAIN WILD-TYPE | 39 | 42 | 20 | 9 |
P value = 0.001 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
5Q GAIN MUTATED | 7 | 0 | 2 | 0 |
5Q GAIN WILD-TYPE | 49 | 61 | 3 | 1 |
P value = 0.0163 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
5Q GAIN MUTATED | 6 | 0 | 3 | 0 | 0 | 0 |
5Q GAIN WILD-TYPE | 21 | 18 | 25 | 7 | 16 | 27 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
5Q GAIN MUTATED | 0 | 0 | 8 | 1 |
5Q GAIN WILD-TYPE | 28 | 51 | 35 | 0 |
P value = 0.00591 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
5Q GAIN MUTATED | 5 | 0 | 4 | 0 |
5Q GAIN WILD-TYPE | 22 | 33 | 31 | 28 |
P value = 7e-04 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
7P GAIN MUTATED | 12 | 0 | 2 | 2 | 0 |
7P GAIN WILD-TYPE | 24 | 27 | 17 | 29 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
7P GAIN MUTATED | 1 | 0 | 13 | 1 | 0 | 0 | 0 | 1 |
7P GAIN WILD-TYPE | 36 | 23 | 6 | 9 | 18 | 8 | 2 | 5 |
P value = 0.0247 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
7P GAIN MUTATED | 8 | 1 | 2 |
7P GAIN WILD-TYPE | 23 | 24 | 32 |
P value = 0.00389 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
7P GAIN MUTATED | 1 | 0 | 3 | 7 |
7P GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
7P GAIN MUTATED | 16 | 0 | 0 | 0 |
7P GAIN WILD-TYPE | 29 | 30 | 30 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
7P GAIN MUTATED | 16 | 0 | 0 | 0 |
7P GAIN WILD-TYPE | 31 | 42 | 20 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
7P GAIN MUTATED | 12 | 0 | 4 | 0 |
7P GAIN WILD-TYPE | 44 | 61 | 1 | 1 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
7P GAIN MUTATED | 9 | 0 | 7 | 0 | 0 | 0 |
7P GAIN WILD-TYPE | 18 | 18 | 21 | 7 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
7P GAIN MUTATED | 0 | 0 | 15 | 1 |
7P GAIN WILD-TYPE | 28 | 51 | 28 | 0 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
7P GAIN MUTATED | 8 | 0 | 8 | 0 |
7P GAIN WILD-TYPE | 19 | 33 | 27 | 28 |
P value = 0.00063 (Fisher's exact test), Q value = 0.0032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
7Q GAIN MUTATED | 12 | 0 | 2 | 2 | 0 |
7Q GAIN WILD-TYPE | 24 | 27 | 17 | 29 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
7Q GAIN MUTATED | 1 | 0 | 13 | 1 | 0 | 0 | 0 | 1 |
7Q GAIN WILD-TYPE | 36 | 23 | 6 | 9 | 18 | 8 | 2 | 5 |
P value = 0.0251 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
7Q GAIN MUTATED | 8 | 1 | 2 |
7Q GAIN WILD-TYPE | 23 | 24 | 32 |
P value = 0.00413 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
7Q GAIN MUTATED | 1 | 0 | 3 | 7 |
7Q GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
7Q GAIN MUTATED | 16 | 0 | 0 | 0 |
7Q GAIN WILD-TYPE | 29 | 30 | 30 | 14 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
7Q GAIN MUTATED | 16 | 0 | 0 | 0 |
7Q GAIN WILD-TYPE | 31 | 42 | 20 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
7Q GAIN MUTATED | 12 | 0 | 4 | 0 |
7Q GAIN WILD-TYPE | 44 | 61 | 1 | 1 |
P value = 1e-04 (Fisher's exact test), Q value = 8e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
7Q GAIN MUTATED | 9 | 0 | 7 | 0 | 0 | 0 |
7Q GAIN WILD-TYPE | 18 | 18 | 21 | 7 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
7Q GAIN MUTATED | 0 | 0 | 15 | 1 |
7Q GAIN WILD-TYPE | 28 | 51 | 28 | 0 |
P value = 5e-05 (Fisher's exact test), Q value = 5e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
7Q GAIN MUTATED | 8 | 0 | 8 | 0 |
7Q GAIN WILD-TYPE | 19 | 33 | 27 | 28 |
P value = 9e-05 (Fisher's exact test), Q value = 0.00075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
8P GAIN MUTATED | 1 | 0 | 7 | 4 | 0 | 0 | 0 | 0 |
8P GAIN WILD-TYPE | 36 | 23 | 12 | 6 | 18 | 8 | 2 | 6 |
P value = 0.0043 (Fisher's exact test), Q value = 0.013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
8P GAIN MUTATED | 1 | 0 | 3 | 7 |
8P GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 0.00046 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
8P GAIN MUTATED | 8 | 0 | 0 | 4 |
8P GAIN WILD-TYPE | 37 | 30 | 30 | 10 |
P value = 0.00017 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
8P GAIN MUTATED | 8 | 0 | 0 | 4 |
8P GAIN WILD-TYPE | 39 | 42 | 20 | 6 |
P value = 0.00034 (Fisher's exact test), Q value = 0.0021
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
8P GAIN MUTATED | 11 | 0 | 1 | 0 |
8P GAIN WILD-TYPE | 45 | 61 | 4 | 1 |
P value = 0.00185 (Fisher's exact test), Q value = 0.0071
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
8P GAIN MUTATED | 4 | 0 | 5 | 3 | 0 | 0 |
8P GAIN WILD-TYPE | 23 | 18 | 23 | 4 | 16 | 27 |
P value = 1e-04 (Fisher's exact test), Q value = 8e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
8P GAIN MUTATED | 1 | 0 | 11 | 0 |
8P GAIN WILD-TYPE | 27 | 51 | 32 | 1 |
P value = 0.00077 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
8P GAIN MUTATED | 4 | 0 | 8 | 0 |
8P GAIN WILD-TYPE | 23 | 33 | 27 | 28 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
8Q GAIN MUTATED | 1 | 0 | 7 | 4 | 0 | 0 | 0 | 0 |
8Q GAIN WILD-TYPE | 36 | 23 | 12 | 6 | 18 | 8 | 2 | 6 |
P value = 0.00407 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
8Q GAIN MUTATED | 1 | 0 | 3 | 7 |
8Q GAIN WILD-TYPE | 15 | 23 | 28 | 13 |
P value = 5e-04 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
8Q GAIN MUTATED | 8 | 0 | 0 | 4 |
8Q GAIN WILD-TYPE | 37 | 30 | 30 | 10 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
8Q GAIN MUTATED | 8 | 0 | 0 | 4 |
8Q GAIN WILD-TYPE | 39 | 42 | 20 | 6 |
P value = 0.00054 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
8Q GAIN MUTATED | 11 | 0 | 1 | 0 |
8Q GAIN WILD-TYPE | 45 | 61 | 4 | 1 |
P value = 0.00195 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
8Q GAIN MUTATED | 4 | 0 | 5 | 3 | 0 | 0 |
8Q GAIN WILD-TYPE | 23 | 18 | 23 | 4 | 16 | 27 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
8Q GAIN MUTATED | 1 | 0 | 11 | 0 |
8Q GAIN WILD-TYPE | 27 | 51 | 32 | 1 |
P value = 7e-04 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
8Q GAIN MUTATED | 4 | 0 | 8 | 0 |
8Q GAIN WILD-TYPE | 23 | 33 | 27 | 28 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
9P GAIN MUTATED | 10 | 0 | 0 | 1 | 0 |
9P GAIN WILD-TYPE | 26 | 27 | 19 | 30 | 10 |
P value = 0.00072 (Fisher's exact test), Q value = 0.0035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
9P GAIN MUTATED | 1 | 0 | 8 | 1 | 1 | 0 | 0 | 0 |
9P GAIN WILD-TYPE | 36 | 23 | 11 | 9 | 17 | 8 | 2 | 6 |
P value = 0.00039 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
9P GAIN MUTATED | 10 | 0 | 0 | 0 |
9P GAIN WILD-TYPE | 35 | 30 | 30 | 14 |
P value = 0.00095 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
9P GAIN MUTATED | 10 | 0 | 0 | 0 |
9P GAIN WILD-TYPE | 37 | 42 | 20 | 10 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
9P GAIN MUTATED | 6 | 1 | 4 | 0 |
9P GAIN WILD-TYPE | 50 | 60 | 1 | 1 |
P value = 0.00545 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
9P GAIN MUTATED | 8 | 0 | 2 | 0 | 0 | 1 |
9P GAIN WILD-TYPE | 19 | 18 | 26 | 7 | 16 | 26 |
P value = 1e-04 (Fisher's exact test), Q value = 8e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
9P GAIN MUTATED | 0 | 1 | 9 | 1 |
9P GAIN WILD-TYPE | 28 | 50 | 34 | 0 |
P value = 0.00268 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
9P GAIN MUTATED | 7 | 0 | 3 | 1 |
9P GAIN WILD-TYPE | 20 | 33 | 32 | 27 |
P value = 0.00032 (Fisher's exact test), Q value = 0.002
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
9Q GAIN MUTATED | 10 | 0 | 0 | 1 | 0 |
9Q GAIN WILD-TYPE | 26 | 27 | 19 | 30 | 10 |
P value = 0.00057 (Fisher's exact test), Q value = 0.003
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
9Q GAIN MUTATED | 1 | 0 | 8 | 1 | 1 | 0 | 0 | 0 |
9Q GAIN WILD-TYPE | 36 | 23 | 11 | 9 | 17 | 8 | 2 | 6 |
P value = 0.00051 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
9Q GAIN MUTATED | 10 | 0 | 0 | 0 |
9Q GAIN WILD-TYPE | 35 | 30 | 30 | 14 |
P value = 0.00078 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
9Q GAIN MUTATED | 10 | 0 | 0 | 0 |
9Q GAIN WILD-TYPE | 37 | 42 | 20 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
9Q GAIN MUTATED | 6 | 1 | 4 | 0 |
9Q GAIN WILD-TYPE | 50 | 60 | 1 | 1 |
P value = 0.00609 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
9Q GAIN MUTATED | 8 | 0 | 2 | 0 | 0 | 1 |
9Q GAIN WILD-TYPE | 19 | 18 | 26 | 7 | 16 | 26 |
P value = 8e-05 (Fisher's exact test), Q value = 0.00068
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
9Q GAIN MUTATED | 0 | 1 | 9 | 1 |
9Q GAIN WILD-TYPE | 28 | 50 | 34 | 0 |
P value = 0.00283 (Fisher's exact test), Q value = 0.0093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
9Q GAIN MUTATED | 7 | 0 | 3 | 1 |
9Q GAIN WILD-TYPE | 20 | 33 | 32 | 27 |
P value = 0.0282 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
12P GAIN MUTATED | 0 | 0 | 3 | 1 | 0 |
12P GAIN WILD-TYPE | 36 | 27 | 16 | 30 | 10 |
P value = 0.00796 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
12P GAIN MUTATED | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 |
12P GAIN WILD-TYPE | 37 | 23 | 18 | 7 | 18 | 8 | 2 | 6 |
P value = 0.0286 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12P GAIN MUTATED | 1 | 0 | 0 | 3 |
12P GAIN WILD-TYPE | 15 | 23 | 31 | 17 |
P value = 0.00489 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
12P GAIN MUTATED | 1 | 0 | 0 | 3 |
12P GAIN WILD-TYPE | 44 | 30 | 30 | 11 |
P value = 0.00232 (Fisher's exact test), Q value = 0.0084
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12P GAIN MUTATED | 1 | 0 | 0 | 3 |
12P GAIN WILD-TYPE | 46 | 42 | 20 | 7 |
P value = 0.0268 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
12P GAIN MUTATED | 1 | 0 | 1 | 2 | 0 | 0 |
12P GAIN WILD-TYPE | 26 | 18 | 27 | 5 | 16 | 27 |
P value = 0.0491 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
12P GAIN MUTATED | 0 | 0 | 4 | 0 |
12P GAIN WILD-TYPE | 28 | 51 | 39 | 1 |
P value = 0.0281 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
12Q GAIN MUTATED | 0 | 0 | 3 | 1 | 0 |
12Q GAIN WILD-TYPE | 36 | 27 | 16 | 30 | 10 |
P value = 0.0078 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
12Q GAIN MUTATED | 0 | 0 | 1 | 3 | 0 | 0 | 0 | 0 |
12Q GAIN WILD-TYPE | 37 | 23 | 18 | 7 | 18 | 8 | 2 | 6 |
P value = 0.0304 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12Q GAIN MUTATED | 1 | 0 | 0 | 3 |
12Q GAIN WILD-TYPE | 15 | 23 | 31 | 17 |
P value = 0.00471 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
12Q GAIN MUTATED | 1 | 0 | 0 | 3 |
12Q GAIN WILD-TYPE | 44 | 30 | 30 | 11 |
P value = 0.00226 (Fisher's exact test), Q value = 0.0082
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12Q GAIN MUTATED | 1 | 0 | 0 | 3 |
12Q GAIN WILD-TYPE | 46 | 42 | 20 | 7 |
P value = 0.0274 (Fisher's exact test), Q value = 0.053
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
12Q GAIN MUTATED | 1 | 0 | 1 | 2 | 0 | 0 |
12Q GAIN WILD-TYPE | 26 | 18 | 27 | 5 | 16 | 27 |
P value = 0.0478 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
12Q GAIN MUTATED | 0 | 0 | 4 | 0 |
12Q GAIN WILD-TYPE | 28 | 51 | 39 | 1 |
P value = 0.00036 (Fisher's exact test), Q value = 0.0022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
14Q GAIN MUTATED | 11 | 0 | 1 | 1 | 0 |
14Q GAIN WILD-TYPE | 25 | 27 | 18 | 30 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
14Q GAIN MUTATED | 2 | 0 | 10 | 0 | 0 | 0 | 0 | 1 |
14Q GAIN WILD-TYPE | 35 | 23 | 9 | 10 | 18 | 8 | 2 | 5 |
P value = 0.0298 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
14Q GAIN MUTATED | 1 | 0 | 2 | 5 |
14Q GAIN WILD-TYPE | 15 | 23 | 29 | 15 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
14Q GAIN MUTATED | 13 | 0 | 0 | 0 |
14Q GAIN WILD-TYPE | 32 | 30 | 30 | 14 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
14Q GAIN MUTATED | 13 | 0 | 0 | 0 |
14Q GAIN WILD-TYPE | 34 | 42 | 20 | 10 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
14Q GAIN MUTATED | 10 | 0 | 3 | 0 |
14Q GAIN WILD-TYPE | 46 | 61 | 2 | 1 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
14Q GAIN MUTATED | 10 | 0 | 3 | 0 | 0 | 0 |
14Q GAIN WILD-TYPE | 17 | 18 | 25 | 7 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
14Q GAIN MUTATED | 0 | 0 | 12 | 1 |
14Q GAIN WILD-TYPE | 28 | 51 | 31 | 0 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
14Q GAIN MUTATED | 9 | 0 | 4 | 0 |
14Q GAIN WILD-TYPE | 18 | 33 | 31 | 28 |
P value = 0.00091 (Fisher's exact test), Q value = 0.0041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
15Q GAIN MUTATED | 1 | 1 | 8 | 1 | 0 | 0 | 0 | 1 |
15Q GAIN WILD-TYPE | 36 | 22 | 11 | 9 | 18 | 8 | 2 | 5 |
P value = 0.0213 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
15Q GAIN MUTATED | 8 | 0 | 1 | 2 |
15Q GAIN WILD-TYPE | 37 | 30 | 29 | 12 |
P value = 0.00918 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
15Q GAIN MUTATED | 9 | 0 | 1 | 1 |
15Q GAIN WILD-TYPE | 38 | 42 | 19 | 9 |
P value = 0.00266 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
15Q GAIN MUTATED | 9 | 1 | 2 | 0 |
15Q GAIN WILD-TYPE | 47 | 60 | 3 | 1 |
P value = 0.0215 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
15Q GAIN MUTATED | 6 | 0 | 5 | 0 | 1 | 0 |
15Q GAIN WILD-TYPE | 21 | 18 | 23 | 7 | 15 | 27 |
P value = 0.00069 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
15Q GAIN MUTATED | 1 | 1 | 9 | 1 |
15Q GAIN WILD-TYPE | 27 | 50 | 34 | 0 |
P value = 0.0157 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
15Q GAIN MUTATED | 5 | 1 | 6 | 0 |
15Q GAIN WILD-TYPE | 22 | 32 | 29 | 28 |
P value = 0.00106 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
17Q GAIN MUTATED | 0 | 2 | 5 | 0 | 0 |
17Q GAIN WILD-TYPE | 36 | 25 | 14 | 31 | 10 |
P value = 0.00353 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
17Q GAIN MUTATED | 2 | 0 | 2 | 3 |
17Q GAIN WILD-TYPE | 45 | 42 | 18 | 7 |
P value = 0.0293 (Fisher's exact test), Q value = 0.055
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18P GAIN MUTATED | 1 | 0 | 0 | 2 |
18P GAIN WILD-TYPE | 46 | 42 | 20 | 8 |
P value = 0.0302 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18Q GAIN MUTATED | 1 | 0 | 0 | 2 |
18Q GAIN WILD-TYPE | 46 | 42 | 20 | 8 |
P value = 0.00076 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
20P GAIN MUTATED | 1 | 0 | 5 | 4 | 0 | 0 | 0 | 0 |
20P GAIN WILD-TYPE | 36 | 23 | 14 | 6 | 18 | 8 | 2 | 6 |
P value = 0.0051 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
20P GAIN MUTATED | 6 | 1 | 0 |
20P GAIN WILD-TYPE | 25 | 24 | 34 |
P value = 0.00023 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
20P GAIN MUTATED | 1 | 0 | 0 | 6 |
20P GAIN WILD-TYPE | 15 | 23 | 31 | 14 |
P value = 0.00151 (Fisher's exact test), Q value = 0.006
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
20P GAIN MUTATED | 6 | 0 | 0 | 4 |
20P GAIN WILD-TYPE | 39 | 30 | 30 | 10 |
P value = 3e-04 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
20P GAIN MUTATED | 6 | 0 | 0 | 4 |
20P GAIN WILD-TYPE | 41 | 42 | 20 | 6 |
P value = 0.0284 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
20P GAIN MUTATED | 9 | 1 | 0 | 0 |
20P GAIN WILD-TYPE | 47 | 60 | 5 | 1 |
P value = 0.0115 (Fisher's exact test), Q value = 0.027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
20P GAIN MUTATED | 3 | 0 | 3 | 3 | 1 | 0 |
20P GAIN WILD-TYPE | 24 | 18 | 25 | 4 | 15 | 27 |
P value = 5e-05 (Fisher's exact test), Q value = 5e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
20P GAIN MUTATED | 0 | 0 | 10 | 0 |
20P GAIN WILD-TYPE | 28 | 51 | 33 | 1 |
P value = 0.0176 (Fisher's exact test), Q value = 0.037
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
20P GAIN MUTATED | 2 | 1 | 7 | 0 |
20P GAIN WILD-TYPE | 25 | 32 | 28 | 28 |
P value = 6e-04 (Fisher's exact test), Q value = 0.0031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
20Q GAIN MUTATED | 1 | 0 | 5 | 4 | 0 | 0 | 0 | 0 |
20Q GAIN WILD-TYPE | 36 | 23 | 14 | 6 | 18 | 8 | 2 | 6 |
P value = 0.00507 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
20Q GAIN MUTATED | 6 | 1 | 0 |
20Q GAIN WILD-TYPE | 25 | 24 | 34 |
P value = 0.00019 (Fisher's exact test), Q value = 0.0013
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
20Q GAIN MUTATED | 1 | 0 | 0 | 6 |
20Q GAIN WILD-TYPE | 15 | 23 | 31 | 14 |
P value = 0.00144 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
20Q GAIN MUTATED | 6 | 0 | 0 | 4 |
20Q GAIN WILD-TYPE | 39 | 30 | 30 | 10 |
P value = 0.00039 (Fisher's exact test), Q value = 0.0023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
20Q GAIN MUTATED | 6 | 0 | 0 | 4 |
20Q GAIN WILD-TYPE | 41 | 42 | 20 | 6 |
P value = 0.0284 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
20Q GAIN MUTATED | 9 | 1 | 0 | 0 |
20Q GAIN WILD-TYPE | 47 | 60 | 5 | 1 |
P value = 0.0102 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
20Q GAIN MUTATED | 3 | 0 | 3 | 3 | 1 | 0 |
20Q GAIN WILD-TYPE | 24 | 18 | 25 | 4 | 15 | 27 |
P value = 5e-05 (Fisher's exact test), Q value = 5e-04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
20Q GAIN MUTATED | 0 | 0 | 10 | 0 |
20Q GAIN WILD-TYPE | 28 | 51 | 33 | 1 |
P value = 0.0174 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
20Q GAIN MUTATED | 2 | 1 | 7 | 0 |
20Q GAIN WILD-TYPE | 25 | 32 | 28 | 28 |
P value = 0.0166 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
22Q GAIN MUTATED | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
22Q GAIN WILD-TYPE | 37 | 23 | 15 | 10 | 18 | 8 | 2 | 6 |
P value = 0.0491 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
22Q GAIN MUTATED | 0 | 0 | 4 | 0 |
22Q GAIN WILD-TYPE | 28 | 51 | 39 | 1 |
P value = 0.0166 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
XQ GAIN MUTATED | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 |
XQ GAIN WILD-TYPE | 37 | 23 | 15 | 10 | 18 | 8 | 2 | 6 |
P value = 0.0476 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
XQ GAIN MUTATED | 0 | 0 | 4 | 0 |
XQ GAIN WILD-TYPE | 28 | 51 | 39 | 1 |
P value = 0.00712 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
1P LOSS MUTATED | 0 | 0 | 2 | 3 | 0 | 0 | 0 | 0 |
1P LOSS WILD-TYPE | 37 | 23 | 17 | 7 | 18 | 8 | 2 | 6 |
P value = 0.0144 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
1P LOSS MUTATED | 0 | 0 | 0 | 3 |
1P LOSS WILD-TYPE | 16 | 23 | 31 | 17 |
P value = 0.00775 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
1P LOSS MUTATED | 2 | 0 | 0 | 3 |
1P LOSS WILD-TYPE | 43 | 30 | 30 | 11 |
P value = 0.0237 (Fisher's exact test), Q value = 0.047
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
1P LOSS MUTATED | 3 | 0 | 0 | 2 |
1P LOSS WILD-TYPE | 44 | 42 | 20 | 8 |
P value = 0.0399 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
1P LOSS MUTATED | 4 | 0 | 1 | 0 |
1P LOSS WILD-TYPE | 52 | 61 | 4 | 1 |
P value = 0.0317 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
1P LOSS MUTATED | 0 | 0 | 5 | 0 |
1P LOSS WILD-TYPE | 28 | 51 | 38 | 1 |
P value = 0.00369 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
3P LOSS MUTATED | 7 | 0 | 4 | 0 | 1 |
3P LOSS WILD-TYPE | 29 | 27 | 15 | 31 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
3P LOSS MUTATED | 0 | 0 | 9 | 3 | 0 | 0 | 0 | 0 |
3P LOSS WILD-TYPE | 37 | 23 | 10 | 7 | 18 | 8 | 2 | 6 |
P value = 0.0381 (Fisher's exact test), Q value = 0.067
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
3P LOSS MUTATED | 7 | 2 | 1 |
3P LOSS WILD-TYPE | 24 | 23 | 33 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
3P LOSS MUTATED | 2 | 0 | 0 | 8 |
3P LOSS WILD-TYPE | 14 | 23 | 31 | 12 |
P value = 0.00106 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
3P LOSS MUTATED | 9 | 0 | 0 | 3 |
3P LOSS WILD-TYPE | 36 | 30 | 30 | 11 |
P value = 0.00083 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
3P LOSS MUTATED | 10 | 0 | 0 | 2 |
3P LOSS WILD-TYPE | 37 | 42 | 20 | 8 |
P value = 0.00045 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
3P LOSS MUTATED | 11 | 0 | 1 | 0 |
3P LOSS WILD-TYPE | 45 | 61 | 4 | 1 |
P value = 0.00455 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
3P LOSS MUTATED | 6 | 0 | 4 | 2 | 0 | 0 |
3P LOSS WILD-TYPE | 21 | 18 | 24 | 5 | 16 | 27 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
3P LOSS MUTATED | 0 | 0 | 12 | 0 |
3P LOSS WILD-TYPE | 28 | 51 | 31 | 1 |
P value = 0.00099 (Fisher's exact test), Q value = 0.0044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
3P LOSS MUTATED | 6 | 0 | 6 | 0 |
3P LOSS WILD-TYPE | 21 | 33 | 29 | 28 |
P value = 0.0361 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
3Q LOSS MUTATED | 4 | 0 | 3 | 0 | 0 |
3Q LOSS WILD-TYPE | 32 | 27 | 16 | 31 | 10 |
P value = 0.002 (Fisher's exact test), Q value = 0.0075
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
3Q LOSS MUTATED | 0 | 0 | 5 | 2 | 0 | 0 | 0 | 0 |
3Q LOSS WILD-TYPE | 37 | 23 | 14 | 8 | 18 | 8 | 2 | 6 |
P value = 0.00107 (Fisher's exact test), Q value = 0.0045
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
3Q LOSS MUTATED | 1 | 0 | 0 | 5 |
3Q LOSS WILD-TYPE | 15 | 23 | 31 | 15 |
P value = 0.0354 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
3Q LOSS MUTATED | 6 | 0 | 0 | 1 |
3Q LOSS WILD-TYPE | 39 | 30 | 30 | 13 |
P value = 0.0317 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
3Q LOSS MUTATED | 6 | 0 | 0 | 1 |
3Q LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.0113 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
3Q LOSS MUTATED | 6 | 0 | 1 | 0 |
3Q LOSS WILD-TYPE | 50 | 61 | 4 | 1 |
P value = 0.00259 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
3Q LOSS MUTATED | 0 | 0 | 7 | 0 |
3Q LOSS WILD-TYPE | 28 | 51 | 36 | 1 |
P value = 0.0266 (Fisher's exact test), Q value = 0.052
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
3Q LOSS MUTATED | 4 | 0 | 3 | 0 |
3Q LOSS WILD-TYPE | 23 | 33 | 32 | 28 |
P value = 0.0309 (Fisher's exact test), Q value = 0.057
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
4P LOSS MUTATED | 0 | 0 | 5 | 0 |
4P LOSS WILD-TYPE | 28 | 51 | 38 | 1 |
P value = 0.0482 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
4Q LOSS MUTATED | 0 | 0 | 4 | 0 |
4Q LOSS WILD-TYPE | 28 | 51 | 39 | 1 |
P value = 0.0435 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
4Q LOSS MUTATED | 3 | 1 | 0 | 0 |
4Q LOSS WILD-TYPE | 24 | 32 | 35 | 28 |
P value = 0.00055 (Fisher's exact test), Q value = 0.0029
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
6P LOSS MUTATED | 12 | 0 | 6 | 2 | 1 |
6P LOSS WILD-TYPE | 24 | 27 | 13 | 29 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
6P LOSS MUTATED | 1 | 0 | 13 | 6 | 1 | 0 | 0 | 0 |
6P LOSS WILD-TYPE | 36 | 23 | 6 | 4 | 17 | 8 | 2 | 6 |
P value = 6e-05 (Fisher's exact test), Q value = 0.00056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
6P LOSS MUTATED | 13 | 2 | 1 |
6P LOSS WILD-TYPE | 18 | 23 | 33 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
6P LOSS MUTATED | 3 | 0 | 2 | 11 |
6P LOSS WILD-TYPE | 13 | 23 | 29 | 9 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
6P LOSS MUTATED | 14 | 1 | 0 | 6 |
6P LOSS WILD-TYPE | 31 | 29 | 30 | 8 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
6P LOSS MUTATED | 15 | 1 | 0 | 5 |
6P LOSS WILD-TYPE | 32 | 41 | 20 | 5 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
6P LOSS MUTATED | 18 | 1 | 2 | 0 |
6P LOSS WILD-TYPE | 38 | 60 | 3 | 1 |
P value = 0.00015 (Fisher's exact test), Q value = 0.0011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
6P LOSS MUTATED | 9 | 0 | 8 | 3 | 0 | 1 |
6P LOSS WILD-TYPE | 18 | 18 | 20 | 4 | 16 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
6P LOSS MUTATED | 0 | 1 | 20 | 0 |
6P LOSS WILD-TYPE | 28 | 50 | 23 | 1 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
6P LOSS MUTATED | 8 | 0 | 12 | 1 |
6P LOSS WILD-TYPE | 19 | 33 | 23 | 27 |
P value = 0.00027 (Fisher's exact test), Q value = 0.0018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
6Q LOSS MUTATED | 11 | 0 | 7 | 2 | 0 |
6Q LOSS WILD-TYPE | 25 | 27 | 12 | 29 | 10 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
6Q LOSS MUTATED | 1 | 0 | 11 | 6 | 1 | 0 | 0 | 1 |
6Q LOSS WILD-TYPE | 36 | 23 | 8 | 4 | 17 | 8 | 2 | 5 |
P value = 0.00024 (Fisher's exact test), Q value = 0.0016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
6Q LOSS MUTATED | 12 | 2 | 1 |
6Q LOSS WILD-TYPE | 19 | 23 | 33 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
6Q LOSS MUTATED | 3 | 1 | 1 | 10 |
6Q LOSS WILD-TYPE | 13 | 22 | 30 | 10 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
6Q LOSS MUTATED | 12 | 1 | 0 | 7 |
6Q LOSS WILD-TYPE | 33 | 29 | 30 | 7 |
P value = 0.00013 (Fisher's exact test), Q value = 0.00099
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
6Q LOSS MUTATED | 13 | 1 | 1 | 5 |
6Q LOSS WILD-TYPE | 34 | 41 | 19 | 5 |
P value = 0.00029 (Fisher's exact test), Q value = 0.0019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
6Q LOSS MUTATED | 16 | 2 | 2 | 0 |
6Q LOSS WILD-TYPE | 40 | 59 | 3 | 1 |
P value = 0.0016 (Fisher's exact test), Q value = 0.0063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
6Q LOSS MUTATED | 9 | 0 | 6 | 3 | 1 | 1 |
6Q LOSS WILD-TYPE | 18 | 18 | 22 | 4 | 15 | 26 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
6Q LOSS MUTATED | 0 | 1 | 19 | 0 |
6Q LOSS WILD-TYPE | 28 | 50 | 24 | 1 |
P value = 0.00094 (Fisher's exact test), Q value = 0.0042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
6Q LOSS MUTATED | 8 | 1 | 10 | 1 |
6Q LOSS WILD-TYPE | 19 | 32 | 25 | 27 |
P value = 0.00145 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
9P LOSS MUTATED | 0 | 0 | 4 | 0 | 0 |
9P LOSS WILD-TYPE | 36 | 27 | 15 | 31 | 10 |
P value = 0.0217 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
9P LOSS MUTATED | 0 | 0 | 2 | 2 |
9P LOSS WILD-TYPE | 45 | 30 | 28 | 12 |
P value = 0.00361 (Fisher's exact test), Q value = 0.011
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
9P LOSS MUTATED | 0 | 0 | 2 | 2 |
9P LOSS WILD-TYPE | 47 | 42 | 18 | 8 |
P value = 0.0212 (Fisher's exact test), Q value = 0.043
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
10P LOSS MUTATED | 0 | 0 | 1 | 2 |
10P LOSS WILD-TYPE | 45 | 30 | 29 | 12 |
P value = 0.0217 (Fisher's exact test), Q value = 0.044
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
10P LOSS MUTATED | 0 | 0 | 2 | 1 |
10P LOSS WILD-TYPE | 47 | 42 | 18 | 9 |
P value = 0.0149 (Fisher's exact test), Q value = 0.033
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
10P LOSS MUTATED | 0 | 0 | 0 | 1 | 2 | 0 |
10P LOSS WILD-TYPE | 27 | 18 | 28 | 6 | 14 | 27 |
P value = 0.00978 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
11P LOSS MUTATED | 6 | 0 | 3 | 0 | 0 |
11P LOSS WILD-TYPE | 30 | 27 | 16 | 31 | 10 |
P value = 0.00011 (Fisher's exact test), Q value = 0.00085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
11P LOSS MUTATED | 0 | 0 | 7 | 2 | 0 | 0 | 0 | 0 |
11P LOSS WILD-TYPE | 37 | 23 | 12 | 8 | 18 | 8 | 2 | 6 |
P value = 0.0162 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
11P LOSS MUTATED | 5 | 1 | 0 |
11P LOSS WILD-TYPE | 26 | 24 | 34 |
P value = 0.00118 (Fisher's exact test), Q value = 0.0049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
11P LOSS MUTATED | 1 | 0 | 0 | 5 |
11P LOSS WILD-TYPE | 15 | 23 | 31 | 15 |
P value = 0.0091 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
11P LOSS MUTATED | 7 | 0 | 0 | 2 |
11P LOSS WILD-TYPE | 38 | 30 | 30 | 12 |
P value = 0.00695 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
11P LOSS MUTATED | 8 | 0 | 0 | 1 |
11P LOSS WILD-TYPE | 39 | 42 | 20 | 9 |
P value = 0.00369 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
11P LOSS MUTATED | 8 | 0 | 1 | 0 |
11P LOSS WILD-TYPE | 48 | 61 | 4 | 1 |
P value = 0.00017 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
11P LOSS MUTATED | 0 | 0 | 9 | 0 |
11P LOSS WILD-TYPE | 28 | 51 | 34 | 1 |
P value = 0.0106 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
11P LOSS MUTATED | 4 | 0 | 5 | 0 |
11P LOSS WILD-TYPE | 23 | 33 | 30 | 28 |
P value = 0.0194 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
11Q LOSS MUTATED | 6 | 0 | 1 | 0 | 0 |
11Q LOSS WILD-TYPE | 30 | 27 | 18 | 31 | 10 |
P value = 0.00075 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
11Q LOSS MUTATED | 0 | 0 | 6 | 1 | 0 | 0 | 0 | 0 |
11Q LOSS WILD-TYPE | 37 | 23 | 13 | 9 | 18 | 8 | 2 | 6 |
P value = 0.0475 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
11Q LOSS MUTATED | 4 | 1 | 0 |
11Q LOSS WILD-TYPE | 27 | 24 | 34 |
P value = 0.00616 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
11Q LOSS MUTATED | 1 | 0 | 0 | 4 |
11Q LOSS WILD-TYPE | 15 | 23 | 31 | 16 |
P value = 0.0358 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
11Q LOSS MUTATED | 6 | 0 | 0 | 1 |
11Q LOSS WILD-TYPE | 39 | 30 | 30 | 13 |
P value = 0.0143 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
11Q LOSS MUTATED | 7 | 0 | 0 | 0 |
11Q LOSS WILD-TYPE | 40 | 42 | 20 | 10 |
P value = 0.011 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
11Q LOSS MUTATED | 6 | 0 | 1 | 0 |
11Q LOSS WILD-TYPE | 50 | 61 | 4 | 1 |
P value = 0.00266 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
11Q LOSS MUTATED | 0 | 0 | 7 | 0 |
11Q LOSS WILD-TYPE | 28 | 51 | 36 | 1 |
P value = 0.0261 (Fisher's exact test), Q value = 0.051
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
11Q LOSS MUTATED | 4 | 0 | 3 | 0 |
11Q LOSS WILD-TYPE | 23 | 33 | 32 | 28 |
P value = 0.00287 (Fisher's exact test), Q value = 0.0093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
12P LOSS MUTATED | 7 | 0 | 0 | 0 | 1 |
12P LOSS WILD-TYPE | 29 | 27 | 19 | 31 | 9 |
P value = 0.00555 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
12P LOSS MUTATED | 1 | 0 | 6 | 1 | 0 | 0 | 0 | 0 |
12P LOSS WILD-TYPE | 36 | 23 | 13 | 9 | 18 | 8 | 2 | 6 |
P value = 0.0171 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
12P LOSS MUTATED | 4 | 0 | 0 |
12P LOSS WILD-TYPE | 27 | 25 | 34 |
P value = 0.00246 (Fisher's exact test), Q value = 0.0087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12P LOSS MUTATED | 0 | 0 | 0 | 4 |
12P LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.00883 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
12P LOSS MUTATED | 7 | 0 | 0 | 0 |
12P LOSS WILD-TYPE | 38 | 30 | 30 | 14 |
P value = 0.014 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12P LOSS MUTATED | 7 | 0 | 0 | 0 |
12P LOSS WILD-TYPE | 40 | 42 | 20 | 10 |
P value = 0.00674 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
12P LOSS MUTATED | 7 | 0 | 1 | 0 |
12P LOSS WILD-TYPE | 49 | 61 | 4 | 1 |
P value = 0.00926 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
12P LOSS MUTATED | 1 | 0 | 7 | 0 |
12P LOSS WILD-TYPE | 27 | 51 | 36 | 1 |
P value = 0.0159 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
12P LOSS MUTATED | 3 | 0 | 5 | 0 |
12P LOSS WILD-TYPE | 24 | 33 | 30 | 28 |
P value = 0.00798 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
12Q LOSS MUTATED | 6 | 0 | 0 | 0 | 1 |
12Q LOSS WILD-TYPE | 30 | 27 | 19 | 31 | 9 |
P value = 0.00109 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
12Q LOSS MUTATED | 0 | 0 | 6 | 1 | 0 | 0 | 0 | 0 |
12Q LOSS WILD-TYPE | 37 | 23 | 13 | 9 | 18 | 8 | 2 | 6 |
P value = 0.017 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
12Q LOSS MUTATED | 4 | 0 | 0 |
12Q LOSS WILD-TYPE | 27 | 25 | 34 |
P value = 0.00282 (Fisher's exact test), Q value = 0.0093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
12Q LOSS MUTATED | 0 | 0 | 0 | 4 |
12Q LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.00884 (Fisher's exact test), Q value = 0.022
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
12Q LOSS MUTATED | 7 | 0 | 0 | 0 |
12Q LOSS WILD-TYPE | 38 | 30 | 30 | 14 |
P value = 0.0135 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
12Q LOSS MUTATED | 7 | 0 | 0 | 0 |
12Q LOSS WILD-TYPE | 40 | 42 | 20 | 10 |
P value = 0.0113 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
12Q LOSS MUTATED | 6 | 0 | 1 | 0 |
12Q LOSS WILD-TYPE | 50 | 61 | 4 | 1 |
P value = 0.00264 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
12Q LOSS MUTATED | 0 | 0 | 7 | 0 |
12Q LOSS WILD-TYPE | 28 | 51 | 36 | 1 |
P value = 0.0364 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
12Q LOSS MUTATED | 3 | 0 | 4 | 0 |
12Q LOSS WILD-TYPE | 24 | 33 | 31 | 28 |
P value = 0.00501 (Fisher's exact test), Q value = 0.015
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
13Q LOSS MUTATED | 6 | 2 | 6 | 0 | 0 |
13Q LOSS WILD-TYPE | 30 | 25 | 13 | 31 | 10 |
P value = 0.00068 (Fisher's exact test), Q value = 0.0034
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
13Q LOSS MUTATED | 1 | 0 | 8 | 2 | 3 | 0 | 0 | 0 |
13Q LOSS WILD-TYPE | 36 | 23 | 11 | 8 | 15 | 8 | 2 | 6 |
P value = 0.00611 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
13Q LOSS MUTATED | 7 | 4 | 0 |
13Q LOSS WILD-TYPE | 24 | 21 | 34 |
P value = 0.0407 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
13Q LOSS MUTATED | 2 | 2 | 1 | 6 |
13Q LOSS WILD-TYPE | 14 | 21 | 30 | 14 |
P value = 0.00203 (Fisher's exact test), Q value = 0.0076
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
13Q LOSS MUTATED | 0 | 3 | 11 | 0 |
13Q LOSS WILD-TYPE | 28 | 48 | 32 | 1 |
P value = 0.0452 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
16P LOSS MUTATED | 1 | 0 | 1 | 3 | 0 | 0 | 0 | 0 |
16P LOSS WILD-TYPE | 36 | 23 | 18 | 7 | 18 | 8 | 2 | 6 |
P value = 0.0144 (Fisher's exact test), Q value = 0.032
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
16P LOSS MUTATED | 0 | 0 | 0 | 3 |
16P LOSS WILD-TYPE | 16 | 23 | 31 | 17 |
P value = 0.00084 (Fisher's exact test), Q value = 0.0038
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
16Q LOSS MUTATED | 3 | 0 | 6 | 1 | 3 |
16Q LOSS WILD-TYPE | 33 | 27 | 13 | 30 | 7 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
16Q LOSS MUTATED | 1 | 1 | 2 | 9 | 0 | 0 | 0 | 0 |
16Q LOSS WILD-TYPE | 36 | 22 | 17 | 1 | 18 | 8 | 2 | 6 |
P value = 4e-05 (Fisher's exact test), Q value = 0.00042
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
16Q LOSS MUTATED | 0 | 1 | 0 | 8 |
16Q LOSS WILD-TYPE | 16 | 22 | 31 | 12 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
16Q LOSS MUTATED | 3 | 1 | 1 | 8 |
16Q LOSS WILD-TYPE | 42 | 29 | 29 | 6 |
P value = 1e-05 (Fisher's exact test), Q value = 0.00016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
16Q LOSS MUTATED | 3 | 1 | 1 | 8 |
16Q LOSS WILD-TYPE | 44 | 41 | 19 | 2 |
P value = 0.0351 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
16Q LOSS MUTATED | 10 | 2 | 1 | 0 |
16Q LOSS WILD-TYPE | 46 | 59 | 4 | 1 |
P value = 2e-05 (Fisher's exact test), Q value = 0.00028
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
16Q LOSS MUTATED | 1 | 0 | 4 | 6 | 1 | 1 |
16Q LOSS WILD-TYPE | 26 | 18 | 24 | 1 | 15 | 26 |
P value = 0.00074 (Fisher's exact test), Q value = 0.0036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
16Q LOSS MUTATED | 0 | 2 | 11 | 0 |
16Q LOSS WILD-TYPE | 28 | 49 | 32 | 1 |
P value = 0.00166 (Fisher's exact test), Q value = 0.0065
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
16Q LOSS MUTATED | 1 | 1 | 10 | 1 |
16Q LOSS WILD-TYPE | 26 | 32 | 25 | 27 |
P value = 0.0098 (Fisher's exact test), Q value = 0.024
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
17P LOSS MUTATED | 5 | 2 | 6 | 0 | 1 |
17P LOSS WILD-TYPE | 31 | 25 | 13 | 31 | 9 |
P value = 0.00278 (Fisher's exact test), Q value = 0.0092
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
17P LOSS MUTATED | 1 | 3 | 6 | 4 | 0 | 0 | 0 | 0 |
17P LOSS WILD-TYPE | 36 | 20 | 13 | 6 | 18 | 8 | 2 | 6 |
P value = 0.00482 (Fisher's exact test), Q value = 0.014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
17P LOSS MUTATED | 7 | 2 | 0 |
17P LOSS WILD-TYPE | 24 | 23 | 34 |
P value = 0.00021 (Fisher's exact test), Q value = 0.0014
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
17P LOSS MUTATED | 0 | 2 | 0 | 7 |
17P LOSS WILD-TYPE | 16 | 21 | 31 | 13 |
P value = 0.0192 (Fisher's exact test), Q value = 0.04
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
17P LOSS MUTATED | 7 | 0 | 3 | 4 |
17P LOSS WILD-TYPE | 38 | 30 | 27 | 10 |
P value = 0.00109 (Fisher's exact test), Q value = 0.0046
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
17P LOSS MUTATED | 7 | 0 | 3 | 4 |
17P LOSS WILD-TYPE | 40 | 42 | 17 | 6 |
P value = 0.00197 (Fisher's exact test), Q value = 0.0074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
17P LOSS MUTATED | 2 | 0 | 5 | 3 | 4 | 0 |
17P LOSS WILD-TYPE | 25 | 18 | 23 | 4 | 12 | 27 |
P value = 0.00236 (Fisher's exact test), Q value = 0.0085
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
17P LOSS MUTATED | 0 | 3 | 11 | 0 |
17P LOSS WILD-TYPE | 28 | 48 | 32 | 1 |
P value = 0.0287 (Fisher's exact test), Q value = 0.054
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
17P LOSS MUTATED | 2 | 4 | 8 | 0 |
17P LOSS WILD-TYPE | 25 | 29 | 27 | 28 |
P value = 0.0455 (Fisher's exact test), Q value = 0.077
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
17Q LOSS MUTATED | 0 | 1 | 4 | 1 | 0 | 0 | 0 | 0 |
17Q LOSS WILD-TYPE | 37 | 22 | 15 | 9 | 18 | 8 | 2 | 6 |
P value = 0.00257 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
17Q LOSS MUTATED | 0 | 0 | 0 | 4 |
17Q LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.0473 (Fisher's exact test), Q value = 0.08
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
18P LOSS MUTATED | 5 | 0 | 1 | 0 | 1 |
18P LOSS WILD-TYPE | 31 | 27 | 18 | 31 | 9 |
P value = 0.0358 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
18P LOSS MUTATED | 1 | 0 | 4 | 2 | 0 | 0 | 0 | 0 |
18P LOSS WILD-TYPE | 36 | 23 | 15 | 8 | 18 | 8 | 2 | 6 |
P value = 0.0169 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
18P LOSS MUTATED | 4 | 0 | 0 |
18P LOSS WILD-TYPE | 27 | 25 | 34 |
P value = 0.0347 (Fisher's exact test), Q value = 0.063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
18P LOSS MUTATED | 6 | 0 | 0 | 1 |
18P LOSS WILD-TYPE | 39 | 30 | 30 | 13 |
P value = 0.0318 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18P LOSS MUTATED | 6 | 0 | 0 | 1 |
18P LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.0037 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
18P LOSS MUTATED | 5 | 0 | 2 | 0 |
18P LOSS WILD-TYPE | 51 | 61 | 3 | 1 |
P value = 0.00247 (Fisher's exact test), Q value = 0.0087
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
18P LOSS MUTATED | 0 | 0 | 7 | 0 |
18P LOSS WILD-TYPE | 28 | 51 | 36 | 1 |
P value = 0.025 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
18P LOSS MUTATED | 2 | 0 | 5 | 0 |
18P LOSS WILD-TYPE | 25 | 33 | 30 | 28 |
P value = 0.0486 (Fisher's exact test), Q value = 0.081
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
18Q LOSS MUTATED | 5 | 0 | 1 | 0 | 1 |
18Q LOSS WILD-TYPE | 31 | 27 | 18 | 31 | 9 |
P value = 0.0363 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
18Q LOSS MUTATED | 1 | 0 | 4 | 2 | 0 | 0 | 0 | 0 |
18Q LOSS WILD-TYPE | 36 | 23 | 15 | 8 | 18 | 8 | 2 | 6 |
P value = 0.0174 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
18Q LOSS MUTATED | 4 | 0 | 0 |
18Q LOSS WILD-TYPE | 27 | 25 | 34 |
P value = 0.0357 (Fisher's exact test), Q value = 0.064
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
18Q LOSS MUTATED | 6 | 0 | 0 | 1 |
18Q LOSS WILD-TYPE | 39 | 30 | 30 | 13 |
P value = 0.0319 (Fisher's exact test), Q value = 0.058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
18Q LOSS MUTATED | 6 | 0 | 0 | 1 |
18Q LOSS WILD-TYPE | 41 | 42 | 20 | 9 |
P value = 0.00382 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
18Q LOSS MUTATED | 5 | 0 | 2 | 0 |
18Q LOSS WILD-TYPE | 51 | 61 | 3 | 1 |
P value = 0.00217 (Fisher's exact test), Q value = 0.008
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
18Q LOSS MUTATED | 0 | 0 | 7 | 0 |
18Q LOSS WILD-TYPE | 28 | 51 | 36 | 1 |
P value = 0.0249 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
18Q LOSS MUTATED | 2 | 0 | 5 | 0 |
18Q LOSS WILD-TYPE | 25 | 33 | 30 | 28 |
P value = 0.00673 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
19P LOSS MUTATED | 0 | 0 | 3 | 0 | 0 |
19P LOSS WILD-TYPE | 36 | 27 | 16 | 31 | 10 |
P value = 0.00268 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
19P LOSS MUTATED | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 |
19P LOSS WILD-TYPE | 37 | 23 | 19 | 7 | 18 | 8 | 2 | 6 |
P value = 0.00137 (Fisher's exact test), Q value = 0.0056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
19P LOSS MUTATED | 0 | 0 | 0 | 3 |
19P LOSS WILD-TYPE | 45 | 30 | 30 | 11 |
P value = 0.00047 (Fisher's exact test), Q value = 0.0026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
19P LOSS MUTATED | 0 | 0 | 0 | 3 |
19P LOSS WILD-TYPE | 47 | 42 | 20 | 7 |
P value = 0.00962 (Fisher's exact test), Q value = 0.023
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
19P LOSS MUTATED | 0 | 0 | 1 | 2 | 0 | 0 |
19P LOSS WILD-TYPE | 27 | 18 | 27 | 5 | 16 | 27 |
P value = 0.00595 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
19Q LOSS MUTATED | 0 | 0 | 3 | 0 | 0 |
19Q LOSS WILD-TYPE | 36 | 27 | 16 | 31 | 10 |
P value = 0.00287 (Fisher's exact test), Q value = 0.0093
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
19Q LOSS MUTATED | 0 | 0 | 0 | 3 | 0 | 0 | 0 | 0 |
19Q LOSS WILD-TYPE | 37 | 23 | 19 | 7 | 18 | 8 | 2 | 6 |
P value = 0.00143 (Fisher's exact test), Q value = 0.0058
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
19Q LOSS MUTATED | 0 | 0 | 0 | 3 |
19Q LOSS WILD-TYPE | 45 | 30 | 30 | 11 |
P value = 0.00045 (Fisher's exact test), Q value = 0.0025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
19Q LOSS MUTATED | 0 | 0 | 0 | 3 |
19Q LOSS WILD-TYPE | 47 | 42 | 20 | 7 |
P value = 0.0105 (Fisher's exact test), Q value = 0.025
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 |
---|---|---|---|---|---|---|
ALL | 27 | 18 | 28 | 7 | 16 | 27 |
19Q LOSS MUTATED | 0 | 0 | 1 | 2 | 0 | 0 |
19Q LOSS WILD-TYPE | 27 | 18 | 27 | 5 | 16 | 27 |
P value = 0.00699 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
21Q LOSS MUTATED | 7 | 0 | 2 | 0 | 0 |
21Q LOSS WILD-TYPE | 29 | 27 | 17 | 31 | 10 |
P value = 7e-05 (Fisher's exact test), Q value = 0.00063
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
21Q LOSS MUTATED | 0 | 0 | 7 | 2 | 0 | 0 | 0 | 0 |
21Q LOSS WILD-TYPE | 37 | 23 | 12 | 8 | 18 | 8 | 2 | 6 |
P value = 0.0169 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 |
---|---|---|---|
ALL | 31 | 25 | 34 |
21Q LOSS MUTATED | 4 | 0 | 0 |
21Q LOSS WILD-TYPE | 27 | 25 | 34 |
P value = 0.00256 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
21Q LOSS MUTATED | 0 | 0 | 0 | 4 |
21Q LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.00661 (Fisher's exact test), Q value = 0.018
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
21Q LOSS MUTATED | 8 | 0 | 0 | 1 |
21Q LOSS WILD-TYPE | 37 | 30 | 30 | 13 |
P value = 0.00711 (Fisher's exact test), Q value = 0.019
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
21Q LOSS MUTATED | 8 | 0 | 0 | 1 |
21Q LOSS WILD-TYPE | 39 | 42 | 20 | 9 |
P value = 0.00389 (Fisher's exact test), Q value = 0.012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
21Q LOSS MUTATED | 8 | 0 | 1 | 0 |
21Q LOSS WILD-TYPE | 48 | 61 | 4 | 1 |
P value = 0.00016 (Fisher's exact test), Q value = 0.0012
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
21Q LOSS MUTATED | 0 | 0 | 9 | 0 |
21Q LOSS WILD-TYPE | 28 | 51 | 34 | 1 |
P value = 0.00776 (Fisher's exact test), Q value = 0.02
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 27 | 33 | 35 | 28 |
21Q LOSS MUTATED | 3 | 0 | 6 | 0 |
21Q LOSS WILD-TYPE | 24 | 33 | 29 | 28 |
P value = 3e-05 (Fisher's exact test), Q value = 0.00036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 |
---|---|---|---|---|---|
ALL | 36 | 27 | 19 | 31 | 10 |
22Q LOSS MUTATED | 2 | 2 | 9 | 0 | 0 |
22Q LOSS WILD-TYPE | 34 | 25 | 10 | 31 | 10 |
P value = 0.0108 (Fisher's exact test), Q value = 0.026
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
22Q LOSS MUTATED | 1 | 1 | 2 | 4 | 2 | 2 | 1 | 0 |
22Q LOSS WILD-TYPE | 36 | 22 | 17 | 6 | 16 | 6 | 1 | 6 |
P value = 0.0404 (Fisher's exact test), Q value = 0.07
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
22Q LOSS MUTATED | 4 | 1 | 1 | 4 |
22Q LOSS WILD-TYPE | 12 | 22 | 30 | 16 |
P value = 0.0431 (Fisher's exact test), Q value = 0.074
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
22Q LOSS MUTATED | 3 | 4 | 2 | 4 |
22Q LOSS WILD-TYPE | 44 | 38 | 18 | 6 |
P value = 0.006 (Fisher's exact test), Q value = 0.017
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
22Q LOSS MUTATED | 0 | 3 | 10 | 0 |
22Q LOSS WILD-TYPE | 28 | 48 | 33 | 1 |
P value = 0.00574 (Fisher's exact test), Q value = 0.016
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
XP LOSS MUTATED | 1 | 0 | 6 | 1 | 0 | 0 | 0 | 0 |
XP LOSS WILD-TYPE | 36 | 23 | 13 | 9 | 18 | 8 | 2 | 6 |
P value = 0.0249 (Fisher's exact test), Q value = 0.049
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
XP LOSS MUTATED | 0 | 0 | 1 | 4 |
XP LOSS WILD-TYPE | 16 | 23 | 30 | 16 |
P value = 0.0197 (Fisher's exact test), Q value = 0.041
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 45 | 30 | 30 | 14 |
XP LOSS MUTATED | 6 | 0 | 0 | 2 |
XP LOSS WILD-TYPE | 39 | 30 | 30 | 12 |
P value = 0.0134 (Fisher's exact test), Q value = 0.031
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 47 | 42 | 20 | 10 |
XP LOSS MUTATED | 7 | 0 | 0 | 1 |
XP LOSS WILD-TYPE | 40 | 42 | 20 | 9 |
P value = 0.0171 (Fisher's exact test), Q value = 0.036
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
XP LOSS MUTATED | 5 | 1 | 2 | 0 |
XP LOSS WILD-TYPE | 51 | 60 | 3 | 1 |
P value = 5e-04 (Fisher's exact test), Q value = 0.0027
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
XP LOSS MUTATED | 0 | 0 | 8 | 0 |
XP LOSS WILD-TYPE | 28 | 51 | 35 | 1 |
P value = 0.0157 (Fisher's exact test), Q value = 0.035
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 | CLUS_5 | CLUS_6 | CLUS_7 | CLUS_8 |
---|---|---|---|---|---|---|---|---|
ALL | 37 | 23 | 19 | 10 | 18 | 8 | 2 | 6 |
XQ LOSS MUTATED | 0 | 0 | 4 | 1 | 0 | 0 | 0 | 0 |
XQ LOSS WILD-TYPE | 37 | 23 | 15 | 9 | 18 | 8 | 2 | 6 |
P value = 0.00263 (Fisher's exact test), Q value = 0.0089
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 16 | 23 | 31 | 20 |
XQ LOSS MUTATED | 0 | 0 | 0 | 4 |
XQ LOSS WILD-TYPE | 16 | 23 | 31 | 16 |
P value = 0.0399 (Fisher's exact test), Q value = 0.069
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 56 | 61 | 5 | 1 |
XQ LOSS MUTATED | 4 | 0 | 1 | 0 |
XQ LOSS WILD-TYPE | 52 | 61 | 4 | 1 |
P value = 0.0301 (Fisher's exact test), Q value = 0.056
nPatients | CLUS_1 | CLUS_2 | CLUS_3 | CLUS_4 |
---|---|---|---|---|
ALL | 28 | 51 | 43 | 1 |
XQ LOSS MUTATED | 0 | 0 | 5 | 0 |
XQ LOSS WILD-TYPE | 28 | 51 | 38 | 1 |
-
Copy number data file = broad_values_by_arm.txt from GISTIC pipeline
-
Processed Copy number data file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events_Preprocess/THYM-TP/22516316/transformed.cor.cli.txt
-
Molecular subtypes file = /xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_mergedClustering/THYM-TP/22541006/THYM-TP.transferedmergedcluster.txt
-
Number of patients = 123
-
Number of significantly arm-level cnvs = 51
-
Number of molecular subtypes = 10
-
Exclude genes that fewer than K tumors have mutations, K = 3
For binary or multi-class clinical features (nominal or ordinal), two-tailed Fisher's exact tests (Fisher 1922) were used to estimate the P values using the 'fisher.test' function in R
For multiple hypothesis correction, Q value is the False Discovery Rate (FDR) analogue of the P value (Benjamini and Hochberg 1995), defined as the minimum FDR at which the test may be called significant. We used the 'Benjamini and Hochberg' method of 'p.adjust' function in R to convert P values into Q values.
In addition to the links below, the full results of the analysis summarized in this report can also be downloaded programmatically using firehose_get, or interactively from either the Broad GDAC website or TCGA Data Coordination Center Portal.