name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme	callscheme_name	N_tot	nsil_tot	nnon_tot	rate_sil	rate_non
TCGA-A5-A0G3-01A-11W-A062-09	42	37	5	28	1.190476e-01	1	exome+100bp flanks	34834024	9	28	2.583681e-07	8.038118e-07
TCGA-A5-A0G5-01A-11W-A062-09	135	123	12	96	8.888889e-02	1	exome+100bp flanks	34834024	25	90	7.176891e-07	2.583681e-06
TCGA-A5-A0G9-01A-11W-A062-09	262	248	14	197	5.343511e-02	1	exome+100bp flanks	34834024	49	189	1.406671e-06	5.425730e-06
TCGA-A5-A0GA-01A-11W-A062-09	305	290	15	212	4.918033e-02	1	exome+100bp flanks	34834024	72	201	2.066945e-06	5.770221e-06
TCGA-A5-A0GB-01A-11W-A062-09	717	686	31	502	4.323570e-02	1	exome+100bp flanks	34834024	175	462	5.023824e-06	1.326289e-05
TCGA-A5-A0GD-01A-11W-A062-09	1	1	0	1	0	1	exome+100bp flanks	34834024	0	1	0	2.870756e-08
TCGA-A5-A0GE-01A-11W-A062-09	34	32	2	25	5.882353e-02	1	exome+100bp flanks	34834024	6	22	1.722454e-07	6.315664e-07
TCGA-A5-A0GH-01A-21W-A062-09	447	423	24	300	5.369128e-02	1	exome+100bp flanks	34834024	118	282	3.387493e-06	8.095533e-06
TCGA-A5-A0GI-01A-11W-A062-09	260	249	11	191	4.230769e-02	1	exome+100bp flanks	34834024	56	178	1.607624e-06	5.109947e-06
TCGA-A5-A0GJ-01A-11W-A062-09	89	82	7	63	7.865169e-02	1	exome+100bp flanks	34834024	14	60	4.019059e-07	1.722454e-06
TCGA-A5-A0GM-01A-11W-A062-09	42	39	3	32	7.142857e-02	1	exome+100bp flanks	34834024	7	30	2.009530e-07	8.612269e-07
TCGA-A5-A0GN-01A-11W-A062-09	60	56	4	44	6.666667e-02	1	exome+100bp flanks	34834024	12	42	3.444908e-07	1.205718e-06
TCGA-A5-A0GP-01A-11W-A062-09	1670	1573	97	1223	5.808383e-02	1	exome+100bp flanks	34834024	336	1139	9.645742e-06	3.269792e-05
TCGA-A5-A0GQ-01A-11D-A122-09	71	70	1	50	1.408451e-02	1	exome+100bp flanks	34834024	20	48	5.741513e-07	1.377963e-06
TCGA-A5-A0GU-01A-11W-A062-09	51	47	4	39	7.843137e-02	1	exome+100bp flanks	34834024	8	36	2.296605e-07	1.033472e-06
TCGA-A5-A0GV-01A-31W-A062-09	55	50	5	40	9.090909e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-A5-A0GW-01A-11W-A062-09	317	305	12	201	3.785489e-02	1	exome+100bp flanks	34834024	100	189	2.870756e-06	5.425730e-06
TCGA-A5-A0GX-01A-11W-A062-09	40	35	5	30	1.250000e-01	1	exome+100bp flanks	34834024	5	27	1.435378e-07	7.751042e-07
TCGA-A5-A0R6-01A-11D-A10B-09	42	40	2	32	4.761905e-02	1	exome+100bp flanks	34834024	8	30	2.296605e-07	8.612269e-07
TCGA-A5-A0R7-01A-31D-A10B-09	54	51	3	38	5.555556e-02	1	exome+100bp flanks	34834024	13	36	3.731983e-07	1.033472e-06
TCGA-A5-A0R8-01A-11D-A10B-09	89	87	2	69	2.247191e-02	1	exome+100bp flanks	34834024	18	66	5.167362e-07	1.894699e-06
TCGA-A5-A0R9-01A-11D-A10B-09	49	45	4	35	8.163265e-02	1	exome+100bp flanks	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-A5-A0RA-01A-21D-A10B-09	85	82	3	70	3.529412e-02	1	exome+100bp flanks	34834024	12	68	3.444908e-07	1.952114e-06
TCGA-A5-A0VO-01A-21D-A10G-09	80	77	3	53	3.750000e-02	1	exome+100bp flanks	34834024	23	52	6.602740e-07	1.492793e-06
TCGA-A5-A0VP-01A-21D-A10B-09	1636	1569	67	1128	4.095355e-02	1	exome+100bp flanks	34834024	412	1039	1.182752e-05	2.982716e-05
TCGA-A5-A0VQ-01A-11D-A10B-09	404	378	26	284	6.435644e-02	1	exome+100bp flanks	34834024	87	262	2.497558e-06	7.521382e-06
TCGA-AJ-A23M-01A-11D-A159-09	120	110	10	81	8.333333e-02	1	exome+100bp flanks	34834024	25	74	7.176891e-07	2.124360e-06
TCGA-AP-A051-01A-21W-A027-09	9271	8829	442	6664	4.767555e-02	1	exome+100bp flanks	34834024	2037	6315	5.847731e-05	1.812883e-04
TCGA-AP-A052-01A-11W-A027-09	32	30	2	26	6.250000e-02	1	exome+100bp flanks	34834024	4	26	1.148303e-07	7.463967e-07
TCGA-AP-A053-01A-21W-A027-09	54	52	2	43	3.703704e-02	1	exome+100bp flanks	34834024	8	39	2.296605e-07	1.119595e-06
TCGA-AP-A054-01A-11W-A062-09	1145	1097	48	824	4.192140e-02	1	exome+100bp flanks	34834024	253	772	7.263014e-06	2.216224e-05
TCGA-AP-A056-01A-11W-A027-09	9586	9061	525	7119	5.476737e-02	1	exome+100bp flanks	34834024	1809	6702	5.193198e-05	1.923981e-04
TCGA-AP-A059-01A-21D-A122-09	12676	12075	601	9123	4.741243e-02	1	exome+100bp flanks	34834024	2729	8474	7.834294e-05	2.432679e-04
TCGA-AP-A05A-01A-11W-A027-09	84	76	8	62	9.523810e-02	1	exome+100bp flanks	34834024	12	61	3.444908e-07	1.751161e-06
TCGA-AP-A05D-01A-11W-A027-09	37	33	4	29	1.081081e-01	1	exome+100bp flanks	34834024	3	28	8.612269e-08	8.038118e-07
TCGA-AP-A05H-01A-11W-A027-09	79	74	5	65	6.329114e-02	1	exome+100bp flanks	34834024	8	62	2.296605e-07	1.779869e-06
TCGA-AP-A05J-01A-11W-A027-09	54	53	1	45	1.851852e-02	1	exome+100bp flanks	34834024	7	38	2.009530e-07	1.090887e-06
TCGA-AP-A05N-01A-11W-A027-09	224	206	18	158	8.035714e-02	1	exome+100bp flanks	34834024	43	151	1.234425e-06	4.334842e-06
TCGA-AP-A05P-01A-11W-A062-09	41	38	3	30	7.317073e-02	1	exome+100bp flanks	34834024	8	30	2.296605e-07	8.612269e-07
TCGA-AP-A0L8-01A-11W-A062-09	69	65	4	52	5.797101e-02	1	exome+100bp flanks	34834024	13	47	3.731983e-07	1.349256e-06
TCGA-AP-A0L9-01A-11W-A062-09	70	68	2	56	2.857143e-02	1	exome+100bp flanks	34834024	12	54	3.444908e-07	1.550208e-06
TCGA-AP-A0LD-01A-11W-A062-09	496	476	20	352	4.032258e-02	1	exome+100bp flanks	34834024	115	337	3.301370e-06	9.674449e-06
TCGA-AP-A0LE-01A-11D-A127-09	518	498	20	365	3.861004e-02	1	exome+100bp flanks	34834024	124	338	3.559738e-06	9.703157e-06
TCGA-AP-A0LF-01A-11D-A122-09	227	218	9	176	3.964758e-02	1	exome+100bp flanks	34834024	39	165	1.119595e-06	4.736748e-06
TCGA-AP-A0LG-01A-11W-A062-09	414	389	25	283	6.038647e-02	1	exome+100bp flanks	34834024	103	268	2.956879e-06	7.693627e-06
TCGA-AP-A0LH-01A-11W-A062-09	130	112	18	105	1.384615e-01	1	exome+100bp flanks	34834024	6	98	1.722454e-07	2.813341e-06
TCGA-AP-A0LI-01A-11W-A062-09	96	94	2	74	2.083333e-02	1	exome+100bp flanks	34834024	19	66	5.454437e-07	1.894699e-06
TCGA-AP-A0LJ-01A-11W-A062-09	47	45	2	37	4.255319e-02	1	exome+100bp flanks	34834024	7	33	2.009530e-07	9.473496e-07
TCGA-AP-A0LL-01A-12D-A127-09	53	51	2	42	3.773585e-02	1	exome+100bp flanks	34834024	9	38	2.583681e-07	1.090887e-06
TCGA-AP-A0LM-01A-11D-A122-09	14639	13935	704	10368	4.809072e-02	1	exome+100bp flanks	34834024	3359	9618	9.642871e-05	2.761094e-04
TCGA-AP-A0LN-01A-11W-A062-09	57	56	1	45	1.754386e-02	1	exome+100bp flanks	34834024	11	45	3.157832e-07	1.291840e-06
TCGA-AP-A0LO-01A-11W-A062-09	37	32	5	26	1.351351e-01	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-AP-A0LP-01A-12D-A10B-09	280	260	20	199	7.142857e-02	1	exome+100bp flanks	34834024	56	178	1.607624e-06	5.109947e-06
TCGA-AP-A0LQ-01A-12D-A10B-09	57	54	3	41	5.263158e-02	1	exome+100bp flanks	34834024	13	40	3.731983e-07	1.148303e-06
TCGA-AP-A0LT-01A-11W-A062-09	670	633	37	465	5.522388e-02	1	exome+100bp flanks	34834024	160	440	4.593210e-06	1.263133e-05
TCGA-AP-A0LV-01A-11W-A062-09	29	27	2	18	6.896552e-02	1	exome+100bp flanks	34834024	9	18	2.583681e-07	5.167362e-07
TCGA-AP-A1DQ-01A-11D-A135-09	32	30	2	25	6.250000e-02	1	exome+100bp flanks	34834024	5	25	1.435378e-07	7.176891e-07
TCGA-AX-A05S-01A-11W-A027-09	524	494	30	369	5.725191e-02	1	exome+100bp flanks	34834024	119	342	3.416200e-06	9.817987e-06
TCGA-AX-A05T-01A-11W-A027-09	62	56	6	41	9.677419e-02	1	exome+100bp flanks	34834024	14	36	4.019059e-07	1.033472e-06
TCGA-AX-A05U-01A-11W-A027-09	40	39	1	28	2.500000e-02	1	exome+100bp flanks	34834024	10	24	2.870756e-07	6.889816e-07
TCGA-AX-A05W-01A-21W-A027-09	65	59	6	44	9.230769e-02	1	exome+100bp flanks	34834024	15	41	4.306135e-07	1.177010e-06
TCGA-AX-A05Y-01A-11W-A027-09	182	166	16	125	8.791209e-02	1	exome+100bp flanks	34834024	39	122	1.119595e-06	3.502323e-06
TCGA-AX-A05Z-01A-11W-A027-09	7247	6860	387	5646	5.340141e-02	1	exome+100bp flanks	34834024	1133	5296	3.252567e-05	1.520353e-04
TCGA-AX-A060-01A-11W-A027-09	697	672	25	498	3.586801e-02	1	exome+100bp flanks	34834024	163	471	4.679333e-06	1.352126e-05
TCGA-AX-A062-01A-11W-A027-09	36	34	2	29	5.555556e-02	1	exome+100bp flanks	34834024	5	26	1.435378e-07	7.463967e-07
TCGA-AX-A063-01A-11W-A027-09	995	955	40	703	4.020101e-02	1	exome+100bp flanks	34834024	239	662	6.861108e-06	1.900441e-05
TCGA-AX-A064-01A-11W-A027-09	265	255	10	189	3.773585e-02	1	exome+100bp flanks	34834024	61	177	1.751161e-06	5.081239e-06
TCGA-AX-A06B-01A-11W-A027-09	45	42	3	30	6.666667e-02	1	exome+100bp flanks	34834024	12	28	3.444908e-07	8.038118e-07
TCGA-AX-A06H-01A-11D-A122-09	408	391	17	271	4.166667e-02	1	exome+100bp flanks	34834024	111	249	3.186540e-06	7.148184e-06
TCGA-AX-A06L-01A-11D-A122-09	42	39	3	30	7.142857e-02	1	exome+100bp flanks	34834024	8	29	2.296605e-07	8.325194e-07
TCGA-AX-A0IS-01A-12D-A10M-09	68	64	4	49	5.882353e-02	1	exome+100bp flanks	34834024	11	48	3.157832e-07	1.377963e-06
TCGA-AX-A0IU-01A-11D-A10B-09	56	51	5	39	8.928571e-02	1	exome+100bp flanks	34834024	12	35	3.444908e-07	1.004765e-06
TCGA-AX-A0IW-01A-11W-A062-09	53	51	2	39	3.773585e-02	1	exome+100bp flanks	34834024	10	37	2.870756e-07	1.062180e-06
TCGA-AX-A0J0-01A-11D-A117-09	8854	8342	512	6880	5.782697e-02	1	exome+100bp flanks	34834024	1363	6278	3.912841e-05	1.802261e-04
TCGA-AX-A0J1-01A-11W-A062-09	5592	5316	276	3803	4.935622e-02	1	exome+100bp flanks	34834024	1435	3628	4.119536e-05	1.041510e-04
TCGA-AX-A1C7-01A-11D-A135-09	53	49	4	39	7.547170e-02	1	exome+100bp flanks	34834024	10	37	2.870756e-07	1.062180e-06
TCGA-AX-A1C8-01A-11D-A135-09	66	63	3	52	4.545455e-02	1	exome+100bp flanks	34834024	11	50	3.157832e-07	1.435378e-06
TCGA-AX-A1CP-01A-11D-A135-09	30	28	2	22	6.666667e-02	1	exome+100bp flanks	34834024	6	21	1.722454e-07	6.028589e-07
TCGA-AX-A2H5-01A-11D-A17D-09	54	50	4	42	7.407407e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-AX-A2HF-01A-11D-A17D-09	41	37	4	28	9.756098e-02	1	exome+100bp flanks	34834024	7	25	2.009530e-07	7.176891e-07
TCGA-B5-A0JN-01A-11D-A10B-09	121	116	5	92	4.132231e-02	1	exome+100bp flanks	34834024	24	87	6.889816e-07	2.497558e-06
TCGA-B5-A0JR-01A-13W-A062-09	621	597	24	432	3.864734e-02	1	exome+100bp flanks	34834024	158	407	4.535795e-06	1.168398e-05
TCGA-B5-A0JS-01A-11D-A10B-09	37	33	4	27	1.081081e-01	1	exome+100bp flanks	34834024	5	21	1.435378e-07	6.028589e-07
TCGA-B5-A0JT-01A-21D-A122-09	64	60	4	49	6.250000e-02	1	exome+100bp flanks	34834024	10	46	2.870756e-07	1.320548e-06
TCGA-B5-A0JV-01A-11D-A10B-09	290	281	9	201	3.103448e-02	1	exome+100bp flanks	34834024	76	188	2.181775e-06	5.397022e-06
TCGA-B5-A0JY-01A-11D-A10B-09	11696	11032	664	8856	5.677155e-02	1	exome+100bp flanks	34834024	2016	8153	5.787445e-05	2.340528e-04
TCGA-B5-A0JZ-01A-11W-A062-09	490	465	25	346	5.102041e-02	1	exome+100bp flanks	34834024	110	324	3.157832e-06	9.301251e-06
TCGA-B5-A0K0-01A-11W-A062-09	23	22	1	19	4.347826e-02	1	exome+100bp flanks	34834024	3	15	8.612269e-08	4.306135e-07
TCGA-B5-A0K1-01A-11W-A062-09	57	53	4	38	7.017544e-02	1	exome+100bp flanks	34834024	15	37	4.306135e-07	1.062180e-06
TCGA-B5-A0K2-01A-12W-A10C-09	274	260	14	191	5.109489e-02	1	exome+100bp flanks	34834024	66	178	1.894699e-06	5.109947e-06
TCGA-B5-A0K3-01A-11W-A062-09	51	48	3	34	5.882353e-02	1	exome+100bp flanks	34834024	14	33	4.019059e-07	9.473496e-07
TCGA-B5-A0K4-01A-11W-A062-09	58	53	5	46	8.620690e-02	1	exome+100bp flanks	34834024	7	41	2.009530e-07	1.177010e-06
TCGA-B5-A0K6-01A-11W-A062-09	241	230	11	177	4.564315e-02	1	exome+100bp flanks	34834024	50	168	1.435378e-06	4.822871e-06
TCGA-B5-A0K7-01A-11W-A10C-09	57	53	4	40	7.017544e-02	1	exome+100bp flanks	34834024	12	37	3.444908e-07	1.062180e-06
TCGA-B5-A0K8-01A-11D-A14K-09	53	51	2	37	3.773585e-02	1	exome+100bp flanks	34834024	14	32	4.019059e-07	9.186421e-07
TCGA-B5-A0K9-01A-21D-A10O-09	746	714	32	515	4.289544e-02	1	exome+100bp flanks	34834024	185	476	5.310899e-06	1.366480e-05
TCGA-B5-A11E-01A-11D-A10M-09	11429	10821	608	8128	5.319801e-02	1	exome+100bp flanks	34834024	2503	7528	7.185503e-05	2.161105e-04
TCGA-B5-A11F-01A-11D-A10M-09	50	50	0	39	0	1	exome+100bp flanks	34834024	10	36	2.870756e-07	1.033472e-06
TCGA-B5-A11G-01A-13D-A122-09	549	519	30	378	5.464481e-02	1	exome+100bp flanks	34834024	127	353	3.645861e-06	1.013377e-05
TCGA-B5-A11H-01A-11D-A122-09	1034	966	68	711	6.576402e-02	1	exome+100bp flanks	34834024	241	656	6.918523e-06	1.883216e-05
TCGA-B5-A11I-01A-11D-A10M-09	49	47	2	37	4.081633e-02	1	exome+100bp flanks	34834024	9	36	2.583681e-07	1.033472e-06
TCGA-B5-A11J-01A-11D-A122-09	447	421	26	311	5.816555e-02	1	exome+100bp flanks	34834024	102	285	2.928172e-06	8.181656e-06
TCGA-B5-A11M-01A-11D-A122-09	37	33	4	28	1.081081e-01	1	exome+100bp flanks	34834024	3	26	8.612269e-08	7.463967e-07
TCGA-B5-A11N-01A-11D-A122-09	2043	1915	128	1542	6.265296e-02	1	exome+100bp flanks	34834024	352	1415	1.010506e-05	4.062120e-05
TCGA-B5-A11O-01A-11D-A122-09	70	67	3	52	4.285714e-02	1	exome+100bp flanks	34834024	15	47	4.306135e-07	1.349256e-06
TCGA-B5-A11Q-01A-11D-A122-09	52	48	4	40	7.692308e-02	1	exome+100bp flanks	34834024	8	37	2.296605e-07	1.062180e-06
TCGA-B5-A11R-01A-11D-A122-09	743	699	44	530	5.921938e-02	1	exome+100bp flanks	34834024	152	486	4.363550e-06	1.395188e-05
TCGA-B5-A11S-01A-11D-A122-09	54	52	2	41	3.703704e-02	1	exome+100bp flanks	34834024	11	38	3.157832e-07	1.090887e-06
TCGA-B5-A11U-01A-11D-A122-09	346	323	23	221	6.647399e-02	1	exome+100bp flanks	34834024	98	206	2.813341e-06	5.913758e-06
TCGA-B5-A11V-01A-11D-A10M-09	65	63	2	51	3.076923e-02	1	exome+100bp flanks	34834024	11	49	3.157832e-07	1.406671e-06
TCGA-B5-A11W-01A-12D-A122-09	78	75	3	62	3.846154e-02	1	exome+100bp flanks	34834024	13	58	3.731983e-07	1.665039e-06
TCGA-B5-A11X-01A-11D-A10M-09	67	65	2	50	2.985075e-02	1	exome+100bp flanks	34834024	15	46	4.306135e-07	1.320548e-06
TCGA-B5-A11Y-01A-21D-A10M-09	1187	1133	54	803	4.549284e-02	1	exome+100bp flanks	34834024	299	744	8.583562e-06	2.135843e-05
TCGA-B5-A11Z-01A-11D-A10M-09	67	64	3	46	4.477612e-02	1	exome+100bp flanks	34834024	18	44	5.167362e-07	1.263133e-06
TCGA-B5-A121-01A-31D-A122-09	35	33	2	25	5.714286e-02	1	exome+100bp flanks	34834024	6	25	1.722454e-07	7.176891e-07
TCGA-B5-A1MU-01A-11D-A13L-09	29	27	2	26	6.896552e-02	1	exome+100bp flanks	34834024	1	25	2.870756e-08	7.176891e-07
TCGA-B5-A1MY-01A-11D-A142-09	51	48	3	39	5.882353e-02	1	exome+100bp flanks	34834024	8	38	2.296605e-07	1.090887e-06
TCGA-BG-A0LW-01A-11W-A062-09	36	33	3	26	8.333333e-02	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-BG-A0LX-01A-11W-A062-09	483	462	21	320	4.347826e-02	1	exome+100bp flanks	34834024	138	306	3.961644e-06	8.784515e-06
TCGA-BG-A0M0-01A-11W-A10C-09	153	141	12	108	7.843137e-02	1	exome+100bp flanks	34834024	32	94	9.186421e-07	2.698511e-06
TCGA-BG-A0M2-01A-11D-A10O-09	38	33	5	24	1.315789e-01	1	exome+100bp flanks	34834024	8	22	2.296605e-07	6.315664e-07
TCGA-BG-A0M3-01A-11W-A10C-09	79	74	5	57	6.329114e-02	1	exome+100bp flanks	34834024	14	55	4.019059e-07	1.578916e-06
TCGA-BG-A0M4-01A-11W-A10C-09	473	449	24	333	5.073996e-02	1	exome+100bp flanks	34834024	107	307	3.071709e-06	8.813222e-06
TCGA-BG-A0M6-01A-31D-A10B-09	45	45	0	35	0	1	exome+100bp flanks	34834024	10	34	2.870756e-07	9.760572e-07
TCGA-BG-A0M7-01A-11W-A062-09	64	58	6	45	9.375000e-02	1	exome+100bp flanks	34834024	13	44	3.731983e-07	1.263133e-06
TCGA-BG-A0M8-01A-12D-A10B-09	69	63	6	45	8.695652e-02	1	exome+100bp flanks	34834024	16	45	4.593210e-07	1.291840e-06
TCGA-BG-A0M9-01A-21W-A10C-09	62	55	7	46	1.129032e-01	1	exome+100bp flanks	34834024	9	44	2.583681e-07	1.263133e-06
TCGA-BG-A0MC-01A-21W-A062-09	62	56	6	44	9.677419e-02	1	exome+100bp flanks	34834024	12	41	3.444908e-07	1.177010e-06
TCGA-BG-A0MG-01A-21D-A10B-09	120	117	3	84	2.500000e-02	0	coding only	34834024	30	80	8.612269e-07	2.296605e-06
TCGA-BG-A0MI-01A-11W-A062-09	69	64	5	47	7.246377e-02	1	exome+100bp flanks	34834024	16	45	4.593210e-07	1.291840e-06
TCGA-BG-A0MO-01A-11W-A062-09	49	47	2	35	4.081633e-02	1	exome+100bp flanks	34834024	12	34	3.444908e-07	9.760572e-07
TCGA-BG-A0MQ-01A-11D-A10B-09	610	580	30	409	4.918033e-02	1	exome+100bp flanks	34834024	161	378	4.621918e-06	1.085146e-05
TCGA-BG-A0MS-01A-11D-A10B-09	50	48	2	38	4.000000e-02	1	exome+100bp flanks	34834024	10	37	2.870756e-07	1.062180e-06
TCGA-BG-A0MT-01A-11D-A10B-09	55	49	6	39	1.090909e-01	1	exome+100bp flanks	34834024	9	39	2.583681e-07	1.119595e-06
TCGA-BG-A0MU-01A-11D-A10B-09	76	71	5	51	6.578947e-02	1	exome+100bp flanks	34834024	19	46	5.454437e-07	1.320548e-06
TCGA-BG-A0RY-01A-11D-A10B-09	61	56	5	42	8.196721e-02	1	exome+100bp flanks	34834024	13	40	3.731983e-07	1.148303e-06
TCGA-BG-A0VT-01A-11D-A10M-09	34	29	5	24	1.470588e-01	1	exome+100bp flanks	34834024	5	23	1.435378e-07	6.602740e-07
TCGA-BG-A0VV-01A-21D-A122-09	44	42	2	34	4.545455e-02	1	exome+100bp flanks	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-BG-A0VW-01A-11D-A122-09	326	315	11	212	3.374233e-02	1	exome+100bp flanks	34834024	89	193	2.554973e-06	5.540560e-06
TCGA-BG-A0VX-01A-11D-A122-09	226	213	13	157	5.752212e-02	1	exome+100bp flanks	34834024	53	151	1.521501e-06	4.334842e-06
TCGA-BG-A0VZ-01A-11D-A10G-09	340	328	12	229	3.529412e-02	1	exome+100bp flanks	34834024	95	214	2.727219e-06	6.143419e-06
TCGA-BG-A0W1-01A-12D-A10G-09	80	74	6	59	7.500000e-02	1	exome+100bp flanks	34834024	15	56	4.306135e-07	1.607624e-06
TCGA-BG-A0W2-01A-11D-A117-09	47	42	5	29	1.063830e-01	1	exome+100bp flanks	34834024	12	28	3.444908e-07	8.038118e-07
TCGA-BG-A0YU-01A-21D-A10M-09	24	22	2	14	8.333333e-02	1	exome+100bp flanks	34834024	8	14	2.296605e-07	4.019059e-07
TCGA-BG-A0YV-01A-11D-A10M-09	89	84	5	68	5.617978e-02	1	exome+100bp flanks	34834024	14	67	4.019059e-07	1.923407e-06
TCGA-BG-A186-01A-11D-A12J-09	38	34	4	27	1.052632e-01	1	exome+100bp flanks	34834024	6	24	1.722454e-07	6.889816e-07
TCGA-BG-A187-01A-11D-A12J-09	108	96	12	78	1.111111e-01	1	exome+100bp flanks	34834024	18	70	5.167362e-07	2.009530e-06
TCGA-BG-A18A-01A-21D-A12J-09	77	72	5	51	6.493506e-02	1	exome+100bp flanks	34834024	20	47	5.741513e-07	1.349256e-06
TCGA-BG-A18B-01A-11D-A12J-09	356	340	16	260	4.494382e-02	1	exome+100bp flanks	34834024	77	240	2.210482e-06	6.889816e-06
TCGA-BG-A18C-01A-11D-A12J-09	51	48	3	38	5.882353e-02	1	exome+100bp flanks	34834024	9	33	2.583681e-07	9.473496e-07
TCGA-BG-A2AE-01A-11D-A16D-09	70	64	6	46	8.571429e-02	1	exome+100bp flanks	34834024	18	44	5.167362e-07	1.263133e-06
TCGA-BK-A0C9-01A-11W-A027-09	469	450	19	338	4.051173e-02	1	exome+100bp flanks	34834024	110	319	3.157832e-06	9.157713e-06
TCGA-BK-A0CA-01A-21D-A122-09	52	47	5	36	9.615385e-02	1	exome+100bp flanks	34834024	10	35	2.870756e-07	1.004765e-06
TCGA-BK-A0CB-01A-32D-A10B-09	76	69	7	48	9.210526e-02	1	exome+100bp flanks	34834024	19	43	5.454437e-07	1.234425e-06
TCGA-BK-A0CC-01A-21W-A027-09	46	45	1	34	2.173913e-02	1	exome+100bp flanks	34834024	11	34	3.157832e-07	9.760572e-07
TCGA-BK-A139-01A-11D-A122-09	103	101	2	76	1.941748e-02	0	coding only	34834024	23	70	6.602740e-07	2.009530e-06
TCGA-BK-A13C-01A-11D-A122-09	52	48	4	37	7.692308e-02	1	exome+100bp flanks	34834024	11	35	3.157832e-07	1.004765e-06
TCGA-BS-A0T9-01A-11D-A12J-09	65	62	3	51	4.615385e-02	1	exome+100bp flanks	34834024	8	49	2.296605e-07	1.406671e-06
TCGA-BS-A0TA-01A-11D-A10B-09	413	399	14	285	3.389831e-02	1	exome+100bp flanks	34834024	109	264	3.129125e-06	7.578797e-06
TCGA-BS-A0TC-01A-11D-A10B-09	1516	1415	101	1186	6.662269e-02	1	exome+100bp flanks	34834024	216	1084	6.200834e-06	3.111900e-05
TCGA-BS-A0TD-01A-11D-A10B-09	41	37	4	27	9.756098e-02	1	exome+100bp flanks	34834024	10	25	2.870756e-07	7.176891e-07
TCGA-BS-A0TE-01A-11D-A10B-09	354	325	29	222	8.192090e-02	1	exome+100bp flanks	34834024	94	212	2.698511e-06	6.086004e-06
TCGA-BS-A0TG-01A-32D-A10B-09	44	42	2	32	4.545455e-02	1	exome+100bp flanks	34834024	9	32	2.583681e-07	9.186421e-07
TCGA-BS-A0TI-01A-11D-A10B-09	95	84	11	72	1.157895e-01	1	exome+100bp flanks	34834024	11	68	3.157832e-07	1.952114e-06
TCGA-BS-A0TJ-01A-11D-A10B-09	652	618	34	450	5.214724e-02	1	exome+100bp flanks	34834024	156	423	4.478380e-06	1.214330e-05
TCGA-BS-A0U5-01A-11D-A10G-09	68	64	4	53	5.882353e-02	1	exome+100bp flanks	34834024	10	47	2.870756e-07	1.349256e-06
TCGA-BS-A0U7-01A-21D-A10B-09	170	162	8	115	4.705882e-02	1	exome+100bp flanks	34834024	43	106	1.234425e-06	3.043002e-06
TCGA-BS-A0U8-01A-11D-A10B-09	410	383	27	273	6.585366e-02	1	exome+100bp flanks	34834024	103	256	2.956879e-06	7.349137e-06
TCGA-BS-A0U9-01B-21D-A10M-09	42	40	2	36	4.761905e-02	1	exome+100bp flanks	34834024	3	35	8.612269e-08	1.004765e-06
TCGA-BS-A0UA-01A-11D-A122-09	337	321	16	237	4.747774e-02	1	exome+100bp flanks	34834024	79	225	2.267898e-06	6.459202e-06
TCGA-BS-A0UF-01A-11D-A10B-09	9470	8948	522	7321	5.512144e-02	1	exome+100bp flanks	34834024	1492	6735	4.283169e-05	1.933454e-04
TCGA-BS-A0UJ-01A-12D-A10B-09	2027	1928	99	1420	4.884065e-02	1	exome+100bp flanks	34834024	474	1323	1.360739e-05	3.798011e-05
TCGA-BS-A0UL-01A-11D-A10G-09	400	378	22	289	5.500000e-02	1	exome+100bp flanks	34834024	84	265	2.411435e-06	7.607505e-06
TCGA-BS-A0UM-01A-11W-A10C-09	377	359	18	270	4.774536e-02	1	exome+100bp flanks	34834024	86	255	2.468851e-06	7.320429e-06
TCGA-BS-A0UT-01A-11D-A10B-09	48	46	2	39	4.166667e-02	1	exome+100bp flanks	34834024	6	34	1.722454e-07	9.760572e-07
TCGA-BS-A0UV-01A-11D-A10B-09	10309	9764	545	7730	5.286643e-02	1	exome+100bp flanks	34834024	1889	7118	5.422859e-05	2.043404e-04
TCGA-BS-A0V6-01A-11D-A122-09	59	56	3	44	5.084746e-02	1	exome+100bp flanks	34834024	11	40	3.157832e-07	1.148303e-06
TCGA-BS-A0V7-01A-21D-A122-09	42	39	3	36	7.142857e-02	1	exome+100bp flanks	34834024	1	34	2.870756e-08	9.760572e-07
TCGA-BS-A0V8-01A-11D-A122-09	89	79	10	63	1.123596e-01	1	exome+100bp flanks	34834024	15	61	4.306135e-07	1.751161e-06
TCGA-BS-A0WQ-01A-21D-A10G-09	59	55	4	40	6.779661e-02	1	exome+100bp flanks	34834024	12	38	3.444908e-07	1.090887e-06
TCGA-D1-A0ZN-01A-11D-A122-09	52	51	1	36	1.923077e-02	1	exome+100bp flanks	34834024	15	32	4.306135e-07	9.186421e-07
TCGA-D1-A0ZO-01A-11D-A122-09	575	553	22	403	3.826087e-02	1	exome+100bp flanks	34834024	141	373	4.047767e-06	1.070792e-05
TCGA-D1-A0ZP-01A-21D-A10M-09	40	38	2	29	5.000000e-02	1	exome+100bp flanks	34834024	8	26	2.296605e-07	7.463967e-07
TCGA-D1-A0ZQ-01A-11D-A122-09	98	92	6	72	6.122449e-02	1	exome+100bp flanks	34834024	19	62	5.454437e-07	1.779869e-06
TCGA-D1-A0ZR-01A-21D-A10M-09	60	55	5	44	8.333333e-02	1	exome+100bp flanks	34834024	10	42	2.870756e-07	1.205718e-06
TCGA-D1-A0ZS-01A-11D-A122-09	411	378	33	278	8.029197e-02	1	exome+100bp flanks	34834024	92	258	2.641096e-06	7.406552e-06
TCGA-D1-A0ZU-01A-11D-A10M-09	40	40	0	28	0	1	exome+100bp flanks	34834024	12	27	3.444908e-07	7.751042e-07
TCGA-D1-A0ZV-01A-11D-A10M-09	43	41	2	34	4.651163e-02	1	exome+100bp flanks	34834024	7	31	2.009530e-07	8.899345e-07
TCGA-D1-A0ZZ-01A-11D-A10M-09	77	74	3	56	3.896104e-02	1	exome+100bp flanks	34834024	15	54	4.306135e-07	1.550208e-06
TCGA-D1-A101-01A-12D-A10M-09	285	271	14	187	4.912281e-02	1	exome+100bp flanks	34834024	77	178	2.210482e-06	5.109947e-06
TCGA-D1-A102-01A-11D-A10M-09	57	48	9	34	1.578947e-01	1	exome+100bp flanks	34834024	13	33	3.731983e-07	9.473496e-07
TCGA-D1-A103-01A-11D-A10M-09	8365	7903	462	5902	5.523013e-02	1	exome+100bp flanks	34834024	1835	5486	5.267838e-05	1.574897e-04
TCGA-D1-A15V-01A-11D-A122-09	46	45	1	36	2.173913e-02	1	exome+100bp flanks	34834024	8	29	2.296605e-07	8.325194e-07
TCGA-D1-A15W-01A-11D-A122-09	79	74	5	61	6.329114e-02	1	exome+100bp flanks	34834024	12	58	3.444908e-07	1.665039e-06
TCGA-D1-A15X-01A-11D-A122-09	1911	1827	84	1307	4.395604e-02	1	exome+100bp flanks	34834024	480	1212	1.377963e-05	3.479357e-05
TCGA-D1-A15Z-01A-11D-A122-09	87	83	4	68	4.597701e-02	1	exome+100bp flanks	34834024	14	58	4.019059e-07	1.665039e-06
TCGA-D1-A160-01A-11D-A122-09	494	472	22	355	4.453441e-02	1	exome+100bp flanks	34834024	108	319	3.100417e-06	9.157713e-06
TCGA-D1-A161-01A-11D-A122-09	102	97	5	71	4.901961e-02	1	exome+100bp flanks	34834024	25	69	7.176891e-07	1.980822e-06
TCGA-D1-A163-01A-11D-A12J-09	549	523	26	374	4.735883e-02	1	exome+100bp flanks	34834024	139	344	3.990352e-06	9.875402e-06
TCGA-D1-A165-01A-11D-A12J-09	67	64	3	51	4.477612e-02	1	exome+100bp flanks	34834024	12	46	3.444908e-07	1.320548e-06
TCGA-D1-A167-01A-11D-A12J-09	1985	1906	79	1342	3.979849e-02	1	exome+100bp flanks	34834024	525	1260	1.507147e-05	3.617153e-05
TCGA-D1-A168-01A-31D-A12J-09	64	62	2	49	3.125000e-02	1	exome+100bp flanks	34834024	13	45	3.731983e-07	1.291840e-06
TCGA-D1-A169-01A-11D-A12J-09	55	54	1	41	1.818182e-02	1	exome+100bp flanks	34834024	13	38	3.731983e-07	1.090887e-06
TCGA-D1-A16B-01A-11D-A12J-09	55	53	2	44	3.636364e-02	1	exome+100bp flanks	34834024	7	41	2.009530e-07	1.177010e-06
TCGA-D1-A16D-01A-11D-A12J-09	45	41	4	36	8.888889e-02	1	exome+100bp flanks	34834024	5	35	1.435378e-07	1.004765e-06
TCGA-D1-A16E-01A-22D-A12J-09	70	66	4	47	5.714286e-02	1	exome+100bp flanks	34834024	17	46	4.880286e-07	1.320548e-06
TCGA-D1-A16F-01A-11D-A12J-09	412	389	23	268	5.582524e-02	1	exome+100bp flanks	34834024	113	244	3.243955e-06	7.004646e-06
TCGA-D1-A16G-01A-31D-A12J-09	35	35	0	26	0	1	exome+100bp flanks	34834024	9	23	2.583681e-07	6.602740e-07
TCGA-D1-A16I-01A-11D-A12J-09	44	42	2	31	4.545455e-02	1	exome+100bp flanks	34834024	10	27	2.870756e-07	7.751042e-07
TCGA-D1-A16J-01A-11D-A12J-09	237	223	14	163	5.907173e-02	1	exome+100bp flanks	34834024	55	152	1.578916e-06	4.363550e-06
TCGA-D1-A16N-01A-11D-A12J-09	129	121	8	93	6.201550e-02	1	exome+100bp flanks	34834024	26	87	7.463967e-07	2.497558e-06
TCGA-D1-A16O-01A-11D-A12J-09	41	38	3	30	7.317073e-02	1	exome+100bp flanks	34834024	6	26	1.722454e-07	7.463967e-07
TCGA-D1-A16Q-01A-12D-A12J-09	34	33	1	28	2.941176e-02	1	exome+100bp flanks	34834024	5	24	1.435378e-07	6.889816e-07
TCGA-D1-A16R-01A-11D-A12J-09	45	44	1	36	2.222222e-02	1	exome+100bp flanks	34834024	8	34	2.296605e-07	9.760572e-07
TCGA-D1-A16S-01A-11D-A12J-09	49	47	2	39	4.081633e-02	1	exome+100bp flanks	34834024	6	36	1.722454e-07	1.033472e-06
TCGA-D1-A16X-01A-11D-A12J-09	2305	2180	125	1741	5.422993e-02	1	exome+100bp flanks	34834024	403	1597	1.156915e-05	4.584598e-05
TCGA-D1-A16Y-01A-31D-A12J-09	1257	1186	71	946	5.648369e-02	1	exome+100bp flanks	34834024	225	883	6.459202e-06	2.534878e-05
TCGA-D1-A174-01A-11D-A12J-09	750	706	44	513	5.866667e-02	1	exome+100bp flanks	34834024	183	469	5.253484e-06	1.346385e-05
TCGA-D1-A176-01A-11D-A12J-09	378	358	20	272	5.291005e-02	1	exome+100bp flanks	34834024	81	254	2.325313e-06	7.291721e-06
TCGA-D1-A177-01A-21D-A12J-09	786	742	44	541	5.597964e-02	1	exome+100bp flanks	34834024	182	505	5.224777e-06	1.449732e-05
TCGA-D1-A17A-01A-11D-A12J-09	243	226	17	167	6.995885e-02	1	exome+100bp flanks	34834024	58	151	1.665039e-06	4.334842e-06
TCGA-D1-A17B-01A-22D-A12J-09	273	260	13	196	4.761905e-02	1	exome+100bp flanks	34834024	61	183	1.751161e-06	5.253484e-06
TCGA-D1-A17C-01A-11D-A12J-09	61	59	2	43	3.278689e-02	1	exome+100bp flanks	34834024	15	42	4.306135e-07	1.205718e-06
TCGA-D1-A17D-01A-12D-A12J-09	510	483	27	348	5.294118e-02	1	exome+100bp flanks	34834024	125	322	3.588446e-06	9.243836e-06
TCGA-D1-A17F-01A-11D-A12J-09	240	224	16	159	6.666667e-02	1	exome+100bp flanks	34834024	60	147	1.722454e-06	4.220012e-06
TCGA-D1-A17H-01A-11D-A12J-09	629	597	32	427	5.087440e-02	1	exome+100bp flanks	34834024	161	395	4.621918e-06	1.133949e-05
TCGA-D1-A17K-01A-11D-A12J-09	60	58	2	42	3.333333e-02	1	exome+100bp flanks	34834024	16	39	4.593210e-07	1.119595e-06
TCGA-D1-A17L-01A-11D-A12J-09	70	68	2	56	2.857143e-02	1	exome+100bp flanks	34834024	12	54	3.444908e-07	1.550208e-06
TCGA-D1-A17M-01A-21D-A12J-09	418	400	18	299	4.306220e-02	1	exome+100bp flanks	34834024	92	277	2.641096e-06	7.951995e-06
TCGA-D1-A17N-01A-11D-A12J-09	32	32	0	26	0	1	exome+100bp flanks	34834024	5	25	1.435378e-07	7.176891e-07
TCGA-D1-A17Q-01A-11D-A12J-09	6770	6393	377	5092	5.568685e-02	1	exome+100bp flanks	34834024	1203	4686	3.453520e-05	1.345236e-04
TCGA-D1-A17R-01A-11D-A12J-09	176	167	9	130	5.113636e-02	1	exome+100bp flanks	34834024	34	124	9.760572e-07	3.559738e-06
TCGA-D1-A17S-01A-11D-A12J-09	48	45	3	36	6.250000e-02	1	exome+100bp flanks	34834024	7	34	2.009530e-07	9.760572e-07
TCGA-D1-A17T-01A-11D-A12J-09	69	62	7	48	1.014493e-01	1	exome+100bp flanks	34834024	14	46	4.019059e-07	1.320548e-06
TCGA-D1-A17U-01A-21D-A12J-09	363	343	20	246	5.509642e-02	1	exome+100bp flanks	34834024	89	229	2.554973e-06	6.574032e-06
TCGA-D1-A1NU-01A-11D-A14G-09	93	88	5	68	5.376344e-02	1	exome+100bp flanks	34834024	20	62	5.741513e-07	1.779869e-06
TCGA-D1-A1NX-01A-11D-A16D-09	53	49	4	41	7.547170e-02	1	exome+100bp flanks	34834024	7	38	2.009530e-07	1.090887e-06
TCGA-DI-A0WH-01A-12D-A12J-09	520	497	23	353	4.423077e-02	1	exome+100bp flanks	34834024	133	331	3.818106e-06	9.502204e-06
TCGA-DI-A1NN-01A-11D-A16D-09	63	58	5	38	7.936508e-02	1	exome+100bp flanks	34834024	20	35	5.741513e-07	1.004765e-06
TCGA-E6-A1LZ-01A-11D-A142-09	215	204	11	167	5.116279e-02	1	exome+100bp flanks	34834024	36	153	1.033472e-06	4.392257e-06
TCGA-EO-A1Y5-01A-11D-A159-09	84	78	6	57	7.142857e-02	1	exome+100bp flanks	34834024	19	50	5.454437e-07	1.435378e-06
TCGA-EO-A1Y8-01A-11D-A159-09	61	57	4	42	6.557377e-02	1	exome+100bp flanks	34834024	15	37	4.306135e-07	1.062180e-06
TCGA-EY-A1GS-01A-11D-A13L-09	283	274	9	209	3.180212e-02	1	exome+100bp flanks	34834024	61	196	1.751161e-06	5.626683e-06
TCGA-EY-A212-01A-11D-A14K-09	66	63	3	49	4.545455e-02	1	exome+100bp flanks	34834024	13	48	3.731983e-07	1.377963e-06
TCGA-FI-A2D2-01A-11D-A17D-09	50	44	6	40	1.200000e-01	1	exome+100bp flanks	34834024	4	39	1.148303e-07	1.119595e-06
TCGA-FI-A2EW-01A-11D-A17D-09	113	101	12	77	1.061947e-01	1	exome+100bp flanks	34834024	22	69	6.315664e-07	1.980822e-06
TCGA-FI-A2EX-01A-11D-A17D-09	61	55	6	47	9.836066e-02	1	exome+100bp flanks	34834024	8	42	2.296605e-07	1.205718e-06
TCGA-FI-A2F8-01A-12D-A17D-09	76	73	3	54	3.947368e-02	1	exome+100bp flanks	34834024	16	51	4.593210e-07	1.464086e-06