Broad GDAC Analyses Status
analyses__2016_11_03__skcm Run for Tumor Type: TCGA-SKCM
Note that the links below require Broad internal Firehose login credentials.
Pipeline
NotRunnable
Runnable
InProcess
Successful
Unsuccessful
1
TM-Aggregate_AnalysisFeatures
0
0
0
1
0
2
TM-Aggregate_Molecular_Subtype_Clusters
0
0
0
1
0
3
TM-CopyNumber_Clustering_CNMF
0
0
0
1
0
4
TM-CopyNumber_Clustering_CNMF_thresholded
0
0
0
1
0
5
TM-CopyNumber_Gistic2
0
0
0
1
0
6
TM-CopyNumber_Gistic2_Postprocess_Focal
0
0
0
1
0
7
TM-Correlate_Clinical_vs_CopyNumber_Arm
0
0
0
1
0
8
TM-Correlate_Clinical_vs_CopyNumber_Focal
0
0
0
1
0
9
TM-Correlate_Clinical_vs_Molecular_Subtypes
0
0
0
1
0
10
TM-Correlate_Clinical_vs_mRNA
0
0
0
1
0
11
TM-Correlate_CopyNumber_vs_miR
0
0
0
1
0
12
TM-Correlate_CopyNumber_vs_mRNA
0
0
0
1
0
13
TM-Correlate_molecularSubtype_vs_CopyNumber_Arm
0
0
0
1
0
14
TM-Correlate_molecularSubtype_vs_CopyNumber_Focal
0
0
0
1
0
15
TM-miR_FindDirectTargets
0
0
0
1
0
16
TM-miR_Mature_Clustering_CNMF
0
0
0
1
0
17
TM-miR_Mature_Clustering_Consensus_Plus
0
0
0
1
0
18
TM-miR_Mature_Preprocess
0
0
0
1
0
19
TM-mRNA_lincRNA_Clustering_Consensus_Plus
0
0
0
1
0
20
TM-mRNA_lincRNA_CNMF
0
0
0
1
0
21
TM-mRNA_Preprocess
0
0
0
1
0
22
TM-mRNA_protein_coding_Clustering_CNMF
0
0
0
1
0
23
TM-mRNA_protein_coding_Clustering_Consensus_Plus
0
0
0
1
0
24
TM-Mutation_CoOccurrence
0
0
0
1
0
25
TM-Pathway_GSEA_mRNA
0
0
0
0
1
Total
0
0
0
24
1
This table generated on Mon Nov 28 11:32:31 2016