| Pipeline | NotRunnable | Runnable | InProcess | Successful | Unsuccessful |
|---|
| 1 | TM-Aggregate_AnalysisFeatures | 0 | 0 | 0 | 1 | 0 |
| 2 | TM-Aggregate_Molecular_Subtype_Clusters | 0 | 0 | 0 | 1 | 0 |
| 3 | TM-CopyNumber_Clustering_CNMF | 0 | 0 | 0 | 1 | 0 |
| 4 | TM-CopyNumber_Clustering_CNMF_thresholded | 0 | 0 | 0 | 1 | 0 |
| 5 | TM-CopyNumber_Gistic2 | 0 | 0 | 0 | 1 | 0 |
| 6 | TM-CopyNumber_Gistic2_Postprocess_Focal | 0 | 0 | 0 | 1 | 0 |
| 7 | TM-Correlate_Clinical_vs_CopyNumber_Arm | 0 | 0 | 0 | 1 | 0 |
| 8 | TM-Correlate_Clinical_vs_CopyNumber_Focal | 0 | 0 | 0 | 1 | 0 |
| 9 | TM-Correlate_Clinical_vs_Molecular_Subtypes | 0 | 0 | 0 | 1 | 0 |
| 10 | TM-Correlate_Clinical_vs_mRNA | 0 | 0 | 0 | 1 | 0 |
| 11 | TM-Correlate_CopyNumber_vs_miR | 0 | 0 | 0 | 1 | 0 |
| 12 | TM-Correlate_CopyNumber_vs_mRNA | 0 | 0 | 0 | 1 | 0 |
| 13 | TM-Correlate_molecularSubtype_vs_CopyNumber_Arm | 0 | 0 | 0 | 1 | 0 |
| 14 | TM-Correlate_molecularSubtype_vs_CopyNumber_Focal | 0 | 0 | 0 | 1 | 0 |
| 15 | TM-miR_FindDirectTargets | 0 | 0 | 0 | 1 | 0 |
| 16 | TM-miR_Mature_Clustering_CNMF | 0 | 0 | 0 | 1 | 0 |
| 17 | TM-miR_Mature_Clustering_Consensus_Plus | 0 | 0 | 0 | 1 | 0 |
| 18 | TM-miR_Mature_Preprocess | 0 | 0 | 0 | 1 | 0 |
| 19 | TM-mRNA_lincRNA_Clustering_Consensus_Plus | 0 | 0 | 0 | 1 | 0 |
| 20 | TM-mRNA_lincRNA_CNMF | 0 | 0 | 0 | 1 | 0 |
| 21 | TM-mRNA_Preprocess | 0 | 0 | 0 | 1 | 0 |
| 22 | TM-mRNA_protein_coding_Clustering_CNMF | 0 | 0 | 0 | 1 | 0 |
| 23 | TM-mRNA_protein_coding_Clustering_Consensus_Plus | 0 | 0 | 0 | 1 | 0 |
| 24 | TM-Mutation_CoOccurrence | 0 | 0 | 0 | 1 | 0 |
| 25 | TM-Pathway_GSEA_mRNA | 0 | 0 | 0 | 0 | 1 |
| Total | 0 | 0 | 0 | 24 | 1 |