[1] "R version 2.15.3 (2013-03-01)"
[1] "dx" ""  
[1] "dx" " " 
[1] "dx" " " 
[1] "opt:  APOBEC"
[1] "vtyp==survival in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==binary in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==continuous in table1 table generation"
[1] "vtyp==multiclass in table1 generation"
                                     Clinical feature                      
DAYS_TO_DEATH_OR_LAST_FUP            "DAYS_TO_DEATH_OR_LAST_FUP"           
YEARS_TO_BIRTH                       "YEARS_TO_BIRTH"                      
PATHOLOGY_T_STAGE                    "PATHOLOGY_T_STAGE"                   
PATHOLOGY_N_STAGE                    "PATHOLOGY_N_STAGE"                   
PATHOLOGY_M_STAGE                    "PATHOLOGY_M_STAGE"                   
RADIATION_THERAPY                    "RADIATION_THERAPY"                   
HISTOLOGICAL_TYPE                    "HISTOLOGICAL_TYPE"                   
NUMBER_PACK_YEARS_SMOKED             "NUMBER_PACK_YEARS_SMOKED"            
NUMBER_OF_LYMPH_NODES                "NUMBER_OF_LYMPH_NODES"               
RACE                                 "RACE"                                
ETHNICITY                            "ETHNICITY"                           
WEIGHT_KG_AT_DIAGNOSIS               "WEIGHT_KG_AT_DIAGNOSIS"              
TUMOR_STATUS                         "TUMOR_STATUS"                        
NEOPLASM_HISTOLOGIC_GRADE            "NEOPLASM_HISTOLOGIC_GRADE"           
TOBACCO_SMOKING_YEAR_STOPPED         "TOBACCO_SMOKING_YEAR_STOPPED"        
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "TOBACCO_SMOKING_PACK_YEARS_SMOKED"   
TOBACCO_SMOKING_HISTORY              "TOBACCO_SMOKING_HISTORY"             
AGEBEGANSMOKINGINYEARS               "AGEBEGANSMOKINGINYEARS"              
RADIATION_THERAPY_STATUS             "RADIATION_THERAPY_STATUS"            
PREGNANCIES_COUNT_TOTAL              "PREGNANCIES_COUNT_TOTAL"             
PREGNANCIES_COUNT_STILLBIRTH         "PREGNANCIES_COUNT_STILLBIRTH"        
PREGNANCY_SPONTANEOUS_ABORTION_COUNT "PREGNANCY_SPONTANEOUS_ABORTION_COUNT"
PREGNANCIES_COUNT_LIVE_BIRTH         "PREGNANCIES_COUNT_LIVE_BIRTH"        
PREGNANCY_THERAPEUTIC_ABORTION_COUNT "PREGNANCY_THERAPEUTIC_ABORTION_COUNT"
PREGNANCIES_COUNT_ECTOPIC            "PREGNANCIES_COUNT_ECTOPIC"           
POS_LYMPH_NODE_LOCATION              "POS_LYMPH_NODE_LOCATION"             
MENOPAUSE_STATUS                     "MENOPAUSE_STATUS"                    
LYMPHOVASCULAR_INVOLVEMENT           "LYMPHOVASCULAR_INVOLVEMENT"          
LYMPH_NODES_EXAMINED_HE_COUNT        "LYMPH_NODES_EXAMINED_HE_COUNT"       
LYMPH_NODES_EXAMINED                 "LYMPH_NODES_EXAMINED"                
KERATINIZATION_SQUAMOUS_CELL         "KERATINIZATION_SQUAMOUS_CELL"        
INITIAL_PATHOLOGIC_DX_YEAR           "INITIAL_PATHOLOGIC_DX_YEAR"          
HISTORY_HORMONAL_CONTRACEPTIVES_USE  "HISTORY_HORMONAL_CONTRACEPTIVES_USE" 
HEIGHT_CM_AT_DIAGNOSIS               "HEIGHT_CM_AT_DIAGNOSIS"              
CORPUS_INVOLVEMENT                   "CORPUS_INVOLVEMENT"                  
CHEMO_CONCURRENT_TYPE                "CHEMO_CONCURRENT_TYPE"               
CERVIX_SUV_RESULTS                   "CERVIX_SUV_RESULTS"                  
AGE_AT_DIAGNOSIS                     "AGE_AT_DIAGNOSIS"                    
CLINICAL_STAGE                       "CLINICAL_STAGE"                      
                                     Statistical test           
DAYS_TO_DEATH_OR_LAST_FUP            "Cox regression test"      
YEARS_TO_BIRTH                       "Spearman correlation test"
PATHOLOGY_T_STAGE                    "Spearman correlation test"
PATHOLOGY_N_STAGE                    "Wilcoxon test"            
PATHOLOGY_M_STAGE                    "Wilcoxon test"            
RADIATION_THERAPY                    "Wilcoxon test"            
HISTOLOGICAL_TYPE                    "Kruskal-Wallis test"      
NUMBER_PACK_YEARS_SMOKED             "Spearman correlation test"
NUMBER_OF_LYMPH_NODES                "Spearman correlation test"
RACE                                 "Kruskal-Wallis test"      
ETHNICITY                            "Wilcoxon test"            
WEIGHT_KG_AT_DIAGNOSIS               "Spearman correlation test"
TUMOR_STATUS                         "Wilcoxon test"            
NEOPLASM_HISTOLOGIC_GRADE            "Kruskal-Wallis test"      
TOBACCO_SMOKING_YEAR_STOPPED         "Spearman correlation test"
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "Spearman correlation test"
TOBACCO_SMOKING_HISTORY              "Spearman correlation test"
AGEBEGANSMOKINGINYEARS               "Spearman correlation test"
RADIATION_THERAPY_STATUS             "Wilcoxon test"            
PREGNANCIES_COUNT_TOTAL              "Spearman correlation test"
PREGNANCIES_COUNT_STILLBIRTH         "Spearman correlation test"
PREGNANCY_SPONTANEOUS_ABORTION_COUNT "Spearman correlation test"
PREGNANCIES_COUNT_LIVE_BIRTH         "Spearman correlation test"
PREGNANCY_THERAPEUTIC_ABORTION_COUNT "Spearman correlation test"
PREGNANCIES_COUNT_ECTOPIC            "Spearman correlation test"
POS_LYMPH_NODE_LOCATION              "Kruskal-Wallis test"      
MENOPAUSE_STATUS                     "Kruskal-Wallis test"      
LYMPHOVASCULAR_INVOLVEMENT           "Wilcoxon test"            
LYMPH_NODES_EXAMINED_HE_COUNT        "Spearman correlation test"
LYMPH_NODES_EXAMINED                 "Spearman correlation test"
KERATINIZATION_SQUAMOUS_CELL         "Wilcoxon test"            
INITIAL_PATHOLOGIC_DX_YEAR           "Spearman correlation test"
HISTORY_HORMONAL_CONTRACEPTIVES_USE  "Kruskal-Wallis test"      
HEIGHT_CM_AT_DIAGNOSIS               "Spearman correlation test"
CORPUS_INVOLVEMENT                   "Wilcoxon test"            
CHEMO_CONCURRENT_TYPE                "Kruskal-Wallis test"      
CERVIX_SUV_RESULTS                   "Spearman correlation test"
AGE_AT_DIAGNOSIS                     "Spearman correlation test"
CLINICAL_STAGE                       "Kruskal-Wallis test"      
                                     Significant variables
DAYS_TO_DEATH_OR_LAST_FUP            "N=0"                
YEARS_TO_BIRTH                       "N=2"                
PATHOLOGY_T_STAGE                    "N=0"                
PATHOLOGY_N_STAGE                    "N=0"                
PATHOLOGY_M_STAGE                    "N=0"                
RADIATION_THERAPY                    "N=0"                
HISTOLOGICAL_TYPE                    "N=0"                
NUMBER_PACK_YEARS_SMOKED             "N=1"                
NUMBER_OF_LYMPH_NODES                "N=0"                
RACE                                 "N=0"                
ETHNICITY                            "N=0"                
WEIGHT_KG_AT_DIAGNOSIS               "N=0"                
TUMOR_STATUS                         "N=0"                
NEOPLASM_HISTOLOGIC_GRADE            "N=0"                
TOBACCO_SMOKING_YEAR_STOPPED         "N=0"                
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "N=1"                
TOBACCO_SMOKING_HISTORY              "N=0"                
AGEBEGANSMOKINGINYEARS               "N=0"                
RADIATION_THERAPY_STATUS             "N=0"                
PREGNANCIES_COUNT_TOTAL              "N=0"                
PREGNANCIES_COUNT_STILLBIRTH         "N=0"                
PREGNANCY_SPONTANEOUS_ABORTION_COUNT "N=0"                
PREGNANCIES_COUNT_LIVE_BIRTH         "N=0"                
PREGNANCY_THERAPEUTIC_ABORTION_COUNT "N=0"                
PREGNANCIES_COUNT_ECTOPIC            "N=0"                
POS_LYMPH_NODE_LOCATION              "N=0"                
MENOPAUSE_STATUS                     "N=3"                
LYMPHOVASCULAR_INVOLVEMENT           "N=0"                
LYMPH_NODES_EXAMINED_HE_COUNT        "N=0"                
LYMPH_NODES_EXAMINED                 "N=0"                
KERATINIZATION_SQUAMOUS_CELL         "N=0"                
INITIAL_PATHOLOGIC_DX_YEAR           "N=3"                
HISTORY_HORMONAL_CONTRACEPTIVES_USE  "N=0"                
HEIGHT_CM_AT_DIAGNOSIS               "N=0"                
CORPUS_INVOLVEMENT                   "N=0"                
CHEMO_CONCURRENT_TYPE                "N=0"                
CERVIX_SUV_RESULTS                   "N=0"                
AGE_AT_DIAGNOSIS                     "N=2"                
CLINICAL_STAGE                       "N=0"                
                                     Associated with                           
DAYS_TO_DEATH_OR_LAST_FUP            " "                                       
YEARS_TO_BIRTH                       "older"                                   
PATHOLOGY_T_STAGE                    " "                                       
PATHOLOGY_N_STAGE                    " "                                       
PATHOLOGY_M_STAGE                    " "                                       
RADIATION_THERAPY                    " "                                       
HISTOLOGICAL_TYPE                    " "                                       
NUMBER_PACK_YEARS_SMOKED             "higher number_pack_years_smoked"         
NUMBER_OF_LYMPH_NODES                " "                                       
RACE                                 " "                                       
ETHNICITY                            " "                                       
WEIGHT_KG_AT_DIAGNOSIS               " "                                       
TUMOR_STATUS                         " "                                       
NEOPLASM_HISTOLOGIC_GRADE            " "                                       
TOBACCO_SMOKING_YEAR_STOPPED         " "                                       
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "higher tobacco_smoking_pack_years_smoked"
TOBACCO_SMOKING_HISTORY              " "                                       
AGEBEGANSMOKINGINYEARS               " "                                       
RADIATION_THERAPY_STATUS             " "                                       
PREGNANCIES_COUNT_TOTAL              " "                                       
PREGNANCIES_COUNT_STILLBIRTH         " "                                       
PREGNANCY_SPONTANEOUS_ABORTION_COUNT " "                                       
PREGNANCIES_COUNT_LIVE_BIRTH         " "                                       
PREGNANCY_THERAPEUTIC_ABORTION_COUNT " "                                       
PREGNANCIES_COUNT_ECTOPIC            " "                                       
POS_LYMPH_NODE_LOCATION              " "                                       
MENOPAUSE_STATUS                     " "                                       
LYMPHOVASCULAR_INVOLVEMENT           " "                                       
LYMPH_NODES_EXAMINED_HE_COUNT        " "                                       
LYMPH_NODES_EXAMINED                 " "                                       
KERATINIZATION_SQUAMOUS_CELL         " "                                       
INITIAL_PATHOLOGIC_DX_YEAR           "higher initial_pathologic_dx_year"       
HISTORY_HORMONAL_CONTRACEPTIVES_USE  " "                                       
HEIGHT_CM_AT_DIAGNOSIS               " "                                       
CORPUS_INVOLVEMENT                   " "                                       
CHEMO_CONCURRENT_TYPE                " "                                       
CERVIX_SUV_RESULTS                   " "                                       
AGE_AT_DIAGNOSIS                     "higher age_at_diagnosis"                 
CLINICAL_STAGE                       " "                                       
                                     &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
DAYS_TO_DEATH_OR_LAST_FUP            " "                                                                                       
YEARS_TO_BIRTH                       "N=2"                                                                                     
PATHOLOGY_T_STAGE                    " "                                                                                       
PATHOLOGY_N_STAGE                    " "                                                                                       
PATHOLOGY_M_STAGE                    " "                                                                                       
RADIATION_THERAPY                    " "                                                                                       
HISTOLOGICAL_TYPE                    " "                                                                                       
NUMBER_PACK_YEARS_SMOKED             "N=1"                                                                                     
NUMBER_OF_LYMPH_NODES                " "                                                                                       
RACE                                 " "                                                                                       
ETHNICITY                            " "                                                                                       
WEIGHT_KG_AT_DIAGNOSIS               " "                                                                                       
TUMOR_STATUS                         " "                                                                                       
NEOPLASM_HISTOLOGIC_GRADE            " "                                                                                       
TOBACCO_SMOKING_YEAR_STOPPED         " "                                                                                       
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "N=1"                                                                                     
TOBACCO_SMOKING_HISTORY              " "                                                                                       
AGEBEGANSMOKINGINYEARS               " "                                                                                       
RADIATION_THERAPY_STATUS             " "                                                                                       
PREGNANCIES_COUNT_TOTAL              " "                                                                                       
PREGNANCIES_COUNT_STILLBIRTH         " "                                                                                       
PREGNANCY_SPONTANEOUS_ABORTION_COUNT " "                                                                                       
PREGNANCIES_COUNT_LIVE_BIRTH         " "                                                                                       
PREGNANCY_THERAPEUTIC_ABORTION_COUNT " "                                                                                       
PREGNANCIES_COUNT_ECTOPIC            " "                                                                                       
POS_LYMPH_NODE_LOCATION              " "                                                                                       
MENOPAUSE_STATUS                     " "                                                                                       
LYMPHOVASCULAR_INVOLVEMENT           " "                                                                                       
LYMPH_NODES_EXAMINED_HE_COUNT        " "                                                                                       
LYMPH_NODES_EXAMINED                 " "                                                                                       
KERATINIZATION_SQUAMOUS_CELL         " "                                                                                       
INITIAL_PATHOLOGIC_DX_YEAR           "N=0"                                                                                     
HISTORY_HORMONAL_CONTRACEPTIVES_USE  " "                                                                                       
HEIGHT_CM_AT_DIAGNOSIS               " "                                                                                       
CORPUS_INVOLVEMENT                   " "                                                                                       
CHEMO_CONCURRENT_TYPE                " "                                                                                       
CERVIX_SUV_RESULTS                   " "                                                                                       
AGE_AT_DIAGNOSIS                     "N=2"                                                                                     
CLINICAL_STAGE                       " "                                                                                       
                                     Associated with                          
DAYS_TO_DEATH_OR_LAST_FUP            " "                                      
YEARS_TO_BIRTH                       "younger"                                
PATHOLOGY_T_STAGE                    " "                                      
PATHOLOGY_N_STAGE                    " "                                      
PATHOLOGY_M_STAGE                    " "                                      
RADIATION_THERAPY                    " "                                      
HISTOLOGICAL_TYPE                    " "                                      
NUMBER_PACK_YEARS_SMOKED             "lower number_pack_years_smoked"         
NUMBER_OF_LYMPH_NODES                " "                                      
RACE                                 " "                                      
ETHNICITY                            " "                                      
WEIGHT_KG_AT_DIAGNOSIS               " "                                      
TUMOR_STATUS                         " "                                      
NEOPLASM_HISTOLOGIC_GRADE            " "                                      
TOBACCO_SMOKING_YEAR_STOPPED         " "                                      
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "lower tobacco_smoking_pack_years_smoked"
TOBACCO_SMOKING_HISTORY              " "                                      
AGEBEGANSMOKINGINYEARS               " "                                      
RADIATION_THERAPY_STATUS             " "                                      
PREGNANCIES_COUNT_TOTAL              " "                                      
PREGNANCIES_COUNT_STILLBIRTH         " "                                      
PREGNANCY_SPONTANEOUS_ABORTION_COUNT " "                                      
PREGNANCIES_COUNT_LIVE_BIRTH         " "                                      
PREGNANCY_THERAPEUTIC_ABORTION_COUNT " "                                      
PREGNANCIES_COUNT_ECTOPIC            " "                                      
POS_LYMPH_NODE_LOCATION              " "                                      
MENOPAUSE_STATUS                     " "                                      
LYMPHOVASCULAR_INVOLVEMENT           " "                                      
LYMPH_NODES_EXAMINED_HE_COUNT        " "                                      
LYMPH_NODES_EXAMINED                 " "                                      
KERATINIZATION_SQUAMOUS_CELL         " "                                      
INITIAL_PATHOLOGIC_DX_YEAR           "lower initial_pathologic_dx_year"       
HISTORY_HORMONAL_CONTRACEPTIVES_USE  " "                                      
HEIGHT_CM_AT_DIAGNOSIS               " "                                      
CORPUS_INVOLVEMENT                   " "                                      
CHEMO_CONCURRENT_TYPE                " "                                      
CERVIX_SUV_RESULTS                   " "                                      
AGE_AT_DIAGNOSIS                     "lower age_at_diagnosis"                 
CLINICAL_STAGE                       " "                                      
                                          
DAYS_TO_DEATH_OR_LAST_FUP            " "  
YEARS_TO_BIRTH                       "N=0"
PATHOLOGY_T_STAGE                    " "  
PATHOLOGY_N_STAGE                    " "  
PATHOLOGY_M_STAGE                    " "  
RADIATION_THERAPY                    " "  
HISTOLOGICAL_TYPE                    " "  
NUMBER_PACK_YEARS_SMOKED             "N=0"
NUMBER_OF_LYMPH_NODES                " "  
RACE                                 " "  
ETHNICITY                            " "  
WEIGHT_KG_AT_DIAGNOSIS               " "  
TUMOR_STATUS                         " "  
NEOPLASM_HISTOLOGIC_GRADE            " "  
TOBACCO_SMOKING_YEAR_STOPPED         " "  
TOBACCO_SMOKING_PACK_YEARS_SMOKED    "N=0"
TOBACCO_SMOKING_HISTORY              " "  
AGEBEGANSMOKINGINYEARS               " "  
RADIATION_THERAPY_STATUS             " "  
PREGNANCIES_COUNT_TOTAL              " "  
PREGNANCIES_COUNT_STILLBIRTH         " "  
PREGNANCY_SPONTANEOUS_ABORTION_COUNT " "  
PREGNANCIES_COUNT_LIVE_BIRTH         " "  
PREGNANCY_THERAPEUTIC_ABORTION_COUNT " "  
PREGNANCIES_COUNT_ECTOPIC            " "  
POS_LYMPH_NODE_LOCATION              " "  
MENOPAUSE_STATUS                     " "  
LYMPHOVASCULAR_INVOLVEMENT           " "  
LYMPH_NODES_EXAMINED_HE_COUNT        " "  
LYMPH_NODES_EXAMINED                 " "  
KERATINIZATION_SQUAMOUS_CELL         " "  
INITIAL_PATHOLOGIC_DX_YEAR           "N=3"
HISTORY_HORMONAL_CONTRACEPTIVES_USE  " "  
HEIGHT_CM_AT_DIAGNOSIS               " "  
CORPUS_INVOLVEMENT                   " "  
CHEMO_CONCURRENT_TYPE                " "  
CERVIX_SUV_RESULTS                   " "  
AGE_AT_DIAGNOSIS                     "N=0"
CLINICAL_STAGE                       " "  
[1] "vtyp==survival in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==binary in basici table generation"
[1] "vtyp==multiclass in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==continuous in basici table generation"
[1] "vtyp==multiclass in basici table generation"
