
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/45/Topgenes_v1.R")
> result <- main("-s/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_TopgenesforCluster/broadinstitute.org/cancer.genome.analysis/00205/45/", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_MethylationPreprocess/CESC-TP/22316744/CESC-TP.meth.by_max_stddev.data.txt", "-u9125", "-oCESC-TP")
Cluster size 9125 broken into 6886 2239 
Cluster size 6886 broken into 3946 2940 
Cluster size 3946 broken into 2471 1475 
Cluster size 2471 broken into 1037 1434 
Done cluster 1037 
Done cluster 1434 
Done cluster 2471 
Done cluster 1475 
Done cluster 3946 
Cluster size 2940 broken into 888 2052 
Done cluster 888 
Cluster size 2052 broken into 1228 824 
Done cluster 1228 
Done cluster 824 
Done cluster 2052 
Done cluster 2940 
Done cluster 6886 
Cluster size 2239 broken into 805 1434 
Done cluster 805 
Done cluster 1434 
Done cluster 2239 
> q(save="no")
