name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-2H-A9GF-01A-11D-A37C-09	427	417	10	320	2.341920e-02	coding only	1	28837107	...	93	294	421	3.225011e-06	1.019520e-05	1.459925e-05	-4.835670e+00	...	24	28780908	...	8.338861e-07
TCGA-2H-A9GG-01A-11D-A37C-09	234	227	7	174	2.991453e-02	coding only	1	28837107	...	50	159	226	1.733877e-06	5.513729e-06	7.837125e-06	-5.105843e+00	...	10	28780908	...	3.474526e-07
TCGA-2H-A9GH-01A-11D-A37C-09	269	264	5	203	1.858736e-02	coding only	1	28837107	...	59	190	264	2.045975e-06	6.588733e-06	9.154871e-06	-5.038348e+00	...	11	28780908	...	3.821978e-07
TCGA-2H-A9GI-01A-11D-A37C-09	357	351	6	273	1.680672e-02	coding only	1	28837107	...	77	250	353	2.670171e-06	8.669386e-06	1.224117e-05	-4.912177e+00	...	20	28780908	...	6.949051e-07
TCGA-2H-A9GJ-01A-11D-A37C-09	212	207	5	168	2.358491e-02	coding only	1	28837107	...	38	159	209	1.317747e-06	5.513729e-06	7.247606e-06	-5.139805e+00	...	7	28780908	...	2.432168e-07
TCGA-2H-A9GK-01A-11D-A37C-09	402	398	4	305	9.950249e-03	coding only	1	28837107	...	91	288	391	3.155656e-06	9.987132e-06	1.355892e-05	-4.867775e+00	...	8	28780908	...	2.779620e-07
TCGA-2H-A9GL-01A-12D-A37C-09	319	314	5	247	1.567398e-02	coding only	1	28837107	...	65	230	308	2.254040e-06	7.975835e-06	1.068068e-05	-4.971401e+00	...	10	28780908	...	3.474526e-07
TCGA-2H-A9GM-01A-11D-A37C-09	235	230	5	176	2.127660e-02	coding only	1	28837107	...	54	164	232	1.872587e-06	5.687117e-06	8.045190e-06	-5.094464e+00	...	9	28780908	...	3.127073e-07
TCGA-2H-A9GN-01A-11D-A37C-09	219	216	3	174	1.369863e-02	coding only	1	28837107	...	42	164	217	1.456457e-06	5.687117e-06	7.525027e-06	-5.123492e+00	...	8	28780908	...	2.779620e-07
TCGA-2H-A9GO-01A-11D-A37C-09	252	242	10	178	3.968254e-02	exome+100bp flanks	2	35907510	...	64	164	247	1.782357e-06	4.567290e-06	6.878784e-06	-5.162488e+00	...	9	32181537	...	2.796635e-07
TCGA-2H-A9GQ-01A-11D-A37C-09	240	236	4	170	1.666667e-02	coding only	1	28837107	...	66	151	235	2.288718e-06	5.236309e-06	8.149222e-06	-5.088884e+00	...	14	28780908	...	4.864336e-07
TCGA-2H-A9GR-01A-12D-A37C-09	450	442	8	359	1.777778e-02	coding only	1	28837107	...	83	338	443	2.878236e-06	1.172101e-05	1.536215e-05	-4.813548e+00	...	14	28780908	...	4.864336e-07
TCGA-IC-A6RE-01A-11D-A33E-09	705	689	16	558	2.269504e-02	coding only	1	28837107	...	126	531	686	4.369370e-06	1.841378e-05	2.378879e-05	-4.623628e+00	...	14	28780908	...	4.864336e-07
TCGA-IC-A6RF-01A-13D-A33E-09	270	266	4	198	1.481481e-02	coding only	1	28837107	...	67	187	264	2.323395e-06	6.484700e-06	9.154871e-06	-5.038348e+00	...	6	28780908	...	2.084715e-07
TCGA-IG-A3I8-01A-11D-A247-09	158	157	1	114	6.329114e-03	coding only	1	28837107	...	43	105	154	1.491134e-06	3.641142e-06	5.340342e-06	-5.272431e+00	...	5	28780908	...	1.737263e-07
TCGA-IG-A3QL-01A-11D-A247-09	138	137	1	101	7.246377e-03	coding only	1	28837107	...	36	93	136	1.248392e-06	3.225011e-06	4.716146e-06	-5.326413e+00	...	6	28780908	...	2.084715e-07
TCGA-IG-A3Y9-01A-12D-A247-09	287	279	8	207	2.787456e-02	coding only	1	28837107	...	71	200	280	2.462106e-06	6.935508e-06	9.709712e-06	-5.012794e+00	...	2	28780908	...	6.949051e-08
TCGA-IG-A3YA-01A-11D-A247-09	114	112	2	94	1.754386e-02	coding only	1	28837107	...	17	92	112	5.895182e-07	3.190334e-06	3.883885e-06	-5.410734e+00	...	1	28780908	...	3.474526e-08
TCGA-IG-A3YB-01A-11D-A247-09	107	102	5	86	4.672897e-02	exome+100bp flanks	2	35907510	...	16	76	106	4.455892e-07	2.116549e-06	2.952029e-06	-5.529879e+00	...	9	32181537	...	2.796635e-07
TCGA-IG-A3YC-01A-11D-A247-09	103	99	4	77	3.883495e-02	coding only	1	28837107	...	22	73	103	7.629059e-07	2.531461e-06	3.571787e-06	-5.447114e+00	...	4	28780908	...	1.389810e-07
TCGA-IG-A4P3-01A-11D-A27G-09	464	457	7	372	1.508621e-02	coding only	1	28837107	...	83	363	459	2.878236e-06	1.258795e-05	1.591699e-05	-4.798139e+00	...	6	28780908	...	2.084715e-07
TCGA-IG-A4QS-01A-11D-A27G-09	289	283	6	233	2.076125e-02	coding only	1	28837107	...	50	214	286	1.733877e-06	7.420994e-06	9.917777e-06	-5.003586e+00	...	17	28780908	...	5.906693e-07
TCGA-IG-A4QT-01A-21D-A27G-09	34	34	0	25	0	coding only	1	28837107	...	9	17	33	3.120979e-07	5.895182e-07	1.144359e-06	-5.941438e+00	...	7	28780908	...	2.432168e-07
TCGA-IG-A50L-01A-11D-A27G-09	180	178	2	148	1.111111e-02	coding only	1	28837107	...	30	131	175	1.040326e-06	4.542758e-06	6.068570e-06	-5.216914e+00	...	12	28780908	...	4.169431e-07
TCGA-IG-A51D-01A-11D-A27G-09	214	209	5	155	2.336449e-02	coding only	1	28837107	...	53	149	212	1.837910e-06	5.166954e-06	7.351639e-06	-5.133616e+00	...	5	28780908	...	1.737263e-07
TCGA-IG-A5B8-01A-11D-A28B-09	342	337	5	238	1.461988e-02	coding only	1	28837107	...	97	230	338	3.363722e-06	7.975835e-06	1.172101e-05	-4.931035e+00	...	5	28780908	...	1.737263e-07
TCGA-IG-A5S3-01A-11D-A28B-09	89	84	5	65	5.617978e-02	coding only	1	28837107	...	19	61	87	6.588733e-07	2.115330e-06	3.016946e-06	-5.520432e+00	...	2	28780908	...	6.949051e-08
TCGA-IG-A625-01A-11D-A31U-09	124	121	3	96	2.419355e-02	coding only	1	28837107	...	25	77	123	8.669386e-07	2.670171e-06	4.265338e-06	-5.370047e+00	...	18	28780908	...	6.254146e-07
TCGA-IG-A6QS-01A-12D-A33E-09	171	167	4	129	2.339181e-02	coding only	1	28837107	...	38	121	170	1.317747e-06	4.195983e-06	5.895182e-06	-5.229503e+00	...	7	28780908	...	2.432168e-07
TCGA-IG-A7DP-01A-31D-A33E-09	86	85	1	68	1.162791e-02	coding only	1	28837107	...	17	60	85	5.895182e-07	2.080653e-06	2.947591e-06	-5.530533e+00	...	7	28780908	...	2.432168e-07
TCGA-IG-A8O2-01A-11D-A36J-09	224	215	9	170	4.017857e-02	exome+100bp flanks	2	35907510	...	45	163	224	1.253220e-06	4.539440e-06	6.238249e-06	-5.204937e+00	...	7	32181537	...	2.175160e-07
TCGA-IG-A97H-01A-11D-A387-09	224	220	4	180	1.785714e-02	coding only	1	28837107	...	39	160	221	1.352424e-06	5.548407e-06	7.663737e-06	-5.115559e+00	...	18	28780908	...	6.254146e-07
TCGA-IG-A97I-01A-11D-A387-09	177	177	0	131	0	coding only	1	28837107	...	46	120	173	1.595167e-06	4.161305e-06	5.999215e-06	-5.221906e+00	...	7	28780908	...	2.432168e-07
TCGA-JY-A6F8-01A-11D-A33E-09	392	378	14	303	3.571429e-02	exome+100bp flanks	2	35907510	...	73	289	386	2.033001e-06	8.048456e-06	1.074984e-05	-4.968598e+00	...	10	32181537	...	3.107372e-07
TCGA-JY-A6FA-01A-11D-A33E-09	223	219	4	178	1.793722e-02	coding only	1	28837107	...	41	163	219	1.421779e-06	5.652439e-06	7.594382e-06	-5.119508e+00	...	11	28780908	...	3.821978e-07
TCGA-JY-A6FB-01A-11D-A33E-09	269	264	5	191	1.858736e-02	coding only	1	28837107	...	73	182	268	2.531461e-06	6.311313e-06	9.293581e-06	-5.031817e+00	...	8	28780908	...	2.779620e-07
TCGA-JY-A6FD-01A-11D-A33E-09	302	296	6	230	1.986755e-02	coding only	1	28837107	...	64	210	297	2.219363e-06	7.282284e-06	1.029923e-05	-4.987195e+00	...	17	28780908	...	5.906693e-07
TCGA-JY-A6FE-01A-11D-A33E-09	173	167	6	139	3.468208e-02	exome+100bp flanks	2	35907510	...	28	132	171	7.797812e-07	3.676111e-06	4.762235e-06	-5.322189e+00	...	5	32181537	...	1.553686e-07
TCGA-JY-A6FG-01A-11D-A33E-09	349	342	7	264	2.005731e-02	coding only	1	28837107	...	76	241	343	2.635493e-06	8.357288e-06	1.189440e-05	-4.924658e+00	...	19	28780908	...	6.601599e-07
TCGA-JY-A6FH-01A-11D-A33E-09	291	289	2	224	6.872852e-03	coding only	1	28837107	...	65	214	287	2.254040e-06	7.420994e-06	9.952455e-06	-5.002070e+00	...	6	28780908	...	2.084715e-07
TCGA-JY-A938-01A-11D-A37C-09	228	226	2	175	8.771930e-03	coding only	1	28837107	...	50	159	224	1.733877e-06	5.513729e-06	7.767769e-06	-5.109704e+00	...	13	28780908	...	4.516883e-07
TCGA-JY-A939-01A-12D-A37C-09	201	197	4	157	1.990050e-02	coding only	1	28837107	...	40	146	195	1.387102e-06	5.062921e-06	6.762121e-06	-5.169917e+00	...	6	28780908	...	2.084715e-07
TCGA-JY-A93C-01A-11D-A387-09	189	186	3	139	1.587302e-02	coding only	1	28837107	...	46	125	186	1.595167e-06	4.334693e-06	6.450023e-06	-5.190439e+00	...	12	28780908	...	4.169431e-07
TCGA-JY-A93D-01A-11D-A387-09	294	291	3	224	1.020408e-02	coding only	1	28837107	...	67	208	289	2.323395e-06	7.212929e-06	1.002181e-05	-4.999054e+00	...	11	28780908	...	3.821978e-07
TCGA-JY-A93E-01A-11D-A37C-09	287	279	8	212	2.787456e-02	coding only	1	28837107	...	65	205	283	2.254040e-06	7.108896e-06	9.813744e-06	-5.008165e+00	...	5	28780908	...	1.737263e-07
TCGA-JY-A93F-01A-21D-A37C-09	210	206	4	164	1.904762e-02	coding only	1	28837107	...	40	150	204	1.387102e-06	5.201631e-06	7.074219e-06	-5.150322e+00	...	9	28780908	...	3.127073e-07
TCGA-KH-A6WC-01A-11D-A33E-09	224	221	3	182	1.339286e-02	coding only	1	28837107	...	38	177	219	1.317747e-06	6.137925e-06	7.594382e-06	-5.119508e+00	...	1	28780908	...	3.474526e-08
TCGA-L5-A43C-01A-11D-A247-09	182	179	3	145	1.648352e-02	coding only	1	28837107	...	34	137	181	1.179036e-06	4.750823e-06	6.276635e-06	-5.202273e+00	...	7	28780908	...	2.432168e-07
TCGA-L5-A43E-01A-11D-A247-09	230	226	4	175	1.739130e-02	coding only	1	28837107	...	48	162	221	1.664522e-06	5.617762e-06	7.663737e-06	-5.115559e+00	...	7	28780908	...	2.432168e-07
TCGA-L5-A43H-01A-11D-A247-09	135	132	3	107	2.222222e-02	coding only	1	28837107	...	25	102	135	8.669386e-07	3.537109e-06	4.681468e-06	-5.329618e+00	...	5	28780908	...	1.737263e-07
TCGA-L5-A43I-01A-11D-A247-09	261	258	3	196	1.149425e-02	coding only	1	28837107	...	62	185	259	2.150008e-06	6.415345e-06	8.981483e-06	-5.046652e+00	...	9	28780908	...	3.127073e-07
TCGA-L5-A43J-01A-12D-A247-09	885	870	15	692	1.694915e-02	coding only	1	28837107	...	177	516	879	6.137925e-06	1.789361e-05	3.048156e-05	-4.515963e+00	...	171	28780908	...	5.941439e-06
TCGA-L5-A43M-01A-11D-A247-09	76	76	0	55	0	coding only	1	28837107	...	20	51	75	6.935508e-07	1.768555e-06	2.600816e-06	-5.584890e+00	...	4	28780908	...	1.389810e-07
TCGA-L5-A4OE-01A-11D-A27G-09	388	382	6	293	1.546392e-02	coding only	1	28837107	...	89	281	382	3.086301e-06	9.744389e-06	1.324682e-05	-4.877888e+00	...	7	28780908	...	2.432168e-07
TCGA-L5-A4OF-01A-11D-A27G-09	113	111	2	93	1.769912e-02	coding only	1	28837107	...	18	78	109	6.241958e-07	2.704848e-06	3.779852e-06	-5.422525e+00	...	11	28780908	...	3.821978e-07
TCGA-L5-A4OG-01A-11D-A27G-09	214	211	3	170	1.401869e-02	coding only	1	28837107	...	41	162	213	1.421779e-06	5.617762e-06	7.386317e-06	-5.131572e+00	...	6	28780908	...	2.084715e-07
TCGA-L5-A4OH-01A-11D-A27G-09	393	386	7	313	1.781170e-02	coding only	1	28837107	...	71	296	385	2.462106e-06	1.026455e-05	1.335085e-05	-4.874491e+00	...	11	28780908	...	3.821978e-07
TCGA-L5-A4OI-01A-11D-A27G-09	2365	2320	45	1827	1.902748e-02	coding only	1	28837107	...	487	1384	2325	1.688796e-05	4.799372e-05	8.062529e-05	-4.093529e+00	...	409	28780908	...	1.421081e-05
TCGA-L5-A4OJ-01A-11D-A27G-09	493	490	3	385	6.085193e-03	coding only	1	28837107	...	103	366	485	3.571787e-06	1.269198e-05	1.681861e-05	-4.774210e+00	...	13	28780908	...	4.516883e-07
TCGA-L5-A4OM-01A-11D-A27G-09	88	88	0	73	0	coding only	1	28837107	...	14	67	86	4.854856e-07	2.323395e-06	2.982269e-06	-5.525453e+00	...	5	28780908	...	1.737263e-07
TCGA-L5-A4ON-01A-11D-A27G-09	192	186	6	144	3.125000e-02	exome+100bp flanks	2	35907510	...	41	140	189	1.141822e-06	3.898906e-06	5.263523e-06	-5.278723e+00	...	3	32181537	...	9.322115e-08
TCGA-L5-A4OO-01A-11D-A27G-09	136	135	1	104	7.352941e-03	coding only	1	28837107	...	31	97	134	1.075004e-06	3.363722e-06	4.646791e-06	-5.332847e+00	...	5	28780908	...	1.737263e-07
TCGA-L5-A4OP-01A-11D-A27G-09	142	141	1	114	7.042254e-03	coding only	1	28837107	...	27	107	139	9.362936e-07	3.710497e-06	4.820178e-06	-5.316937e+00	...	4	28780908	...	1.389810e-07
TCGA-L5-A4OQ-01A-11D-A27G-09	90	88	2	69	2.222222e-02	coding only	1	28837107	...	18	67	88	6.241958e-07	2.323395e-06	3.051624e-06	-5.515469e+00	...	1	28780908	...	3.474526e-08
TCGA-L5-A4OR-01A-11D-A27G-09	215	214	1	158	4.651163e-03	coding only	1	28837107	...	54	150	212	1.872587e-06	5.201631e-06	7.351639e-06	-5.133616e+00	...	7	28780908	...	2.432168e-07
TCGA-L5-A4OS-01A-11D-A28B-09	135	134	1	107	7.407407e-03	coding only	1	28837107	...	26	104	134	9.016161e-07	3.606464e-06	4.646791e-06	-5.332847e+00	...	3	28780908	...	1.042358e-07
TCGA-L5-A4OT-01A-11D-A28B-09	287	286	1	229	3.484321e-03	coding only	1	28837107	...	55	217	279	1.907265e-06	7.525027e-06	9.675034e-06	-5.014347e+00	...	6	28780908	...	2.084715e-07
TCGA-L5-A4OU-01A-11D-A28B-09	226	224	2	161	8.849558e-03	coding only	1	28837107	...	62	152	222	2.150008e-06	5.270986e-06	7.698414e-06	-5.113599e+00	...	7	28780908	...	2.432168e-07
TCGA-L5-A4OW-01A-11D-A28B-09	300	298	2	236	6.666667e-03	coding only	1	28837107	...	58	224	290	2.011297e-06	7.767769e-06	1.005649e-05	-4.997554e+00	...	6	28780908	...	2.084715e-07
TCGA-L5-A4OX-01A-21D-A28B-09	170	164	6	123	3.529412e-02	exome+100bp flanks	2	35907510	...	40	111	165	1.113973e-06	3.091275e-06	4.595139e-06	-5.337701e+00	...	8	32181537	...	2.485897e-07
TCGA-L5-A88S-01A-11D-A36J-09	183	179	4	142	2.185792e-02	coding only	1	28837107	...	36	137	180	1.248392e-06	4.750823e-06	6.241958e-06	-5.204679e+00	...	4	28780908	...	1.389810e-07
TCGA-L5-A88T-01A-11D-A351-09	130	129	1	107	7.692308e-03	coding only	1	28837107	...	21	101	128	7.282284e-07	3.502432e-06	4.438725e-06	-5.352742e+00	...	5	28780908	...	1.737263e-07
TCGA-L5-A88V-01A-11D-A351-09	216	211	5	164	2.314815e-02	coding only	1	28837107	...	45	156	211	1.560489e-06	5.409697e-06	7.316961e-06	-5.135669e+00	...	5	28780908	...	1.737263e-07
TCGA-L5-A88W-01A-11D-A351-09	199	192	7	155	3.517588e-02	exome+100bp flanks	2	35907510	...	37	144	197	1.030425e-06	4.010303e-06	5.486317e-06	-5.260719e+00	...	9	32181537	...	2.796635e-07
TCGA-L5-A88Y-01A-11D-A351-09	3	2	1	2	3.333333e-01	coding only	1	28837107	...	0	2	3	0	6.935508e-08	1.040326e-07	-6.982830e+00	...	0	28780908	...	0
TCGA-L5-A88Z-01A-11D-A36J-09	222	222	0	171	0	coding only	1	28837107	...	50	155	217	1.733877e-06	5.375019e-06	7.525027e-06	-5.123492e+00	...	12	28780908	...	4.169431e-07
TCGA-L5-A891-01A-11D-A36J-09	305	301	4	240	1.311475e-02	coding only	1	28837107	...	60	221	301	2.080653e-06	7.663737e-06	1.043794e-05	-4.981385e+00	...	16	28780908	...	5.559241e-07
TCGA-L5-A893-01A-11D-A36J-09	288	283	5	223	1.736111e-02	coding only	1	28837107	...	60	217	288	2.080653e-06	7.525027e-06	9.987132e-06	-5.000559e+00	...	6	28780908	...	2.084715e-07
TCGA-L5-A8NE-01A-11D-A37C-09	354	348	6	283	1.694915e-02	coding only	1	28837107	...	64	261	345	2.219363e-06	9.050839e-06	1.196375e-05	-4.922133e+00	...	15	28780908	...	5.211788e-07
TCGA-L5-A8NF-01A-11D-A37C-09	270	266	4	205	1.481481e-02	coding only	1	28837107	...	60	190	266	2.080653e-06	6.588733e-06	9.224226e-06	-5.035070e+00	...	12	28780908	...	4.169431e-07
TCGA-L5-A8NG-01A-11D-A37C-09	309	304	5	239	1.618123e-02	coding only	1	28837107	...	64	221	304	2.219363e-06	7.663737e-06	1.054197e-05	-4.977078e+00	...	14	28780908	...	4.864336e-07
TCGA-L5-A8NH-01A-11D-A37C-09	315	312	3	262	9.523810e-03	coding only	1	28837107	...	50	245	312	1.733877e-06	8.495998e-06	1.081939e-05	-4.965797e+00	...	14	28780908	...	4.864336e-07
TCGA-L5-A8NI-01A-11D-A37C-09	322	315	7	250	2.173913e-02	coding only	1	28837107	...	61	235	312	2.115330e-06	8.149222e-06	1.081939e-05	-4.965797e+00	...	10	28780908	...	3.474526e-07
TCGA-L5-A8NJ-01A-11D-A36J-09	361	357	4	279	1.108033e-02	coding only	1	28837107	...	76	267	355	2.635493e-06	9.258904e-06	1.231053e-05	-4.909723e+00	...	8	28780908	...	2.779620e-07
TCGA-L5-A8NK-01A-21D-A37C-09	331	325	6	256	1.812689e-02	coding only	1	28837107	...	68	241	326	2.358073e-06	8.357288e-06	1.130488e-05	-4.946734e+00	...	11	28780908	...	3.821978e-07
TCGA-L5-A8NL-01A-12D-A37C-09	254	253	1	200	3.937008e-03	coding only	1	28837107	...	51	187	248	1.768555e-06	6.484700e-06	8.600031e-06	-5.065500e+00	...	9	28780908	...	3.127073e-07
TCGA-L5-A8NM-01A-11D-A37C-09	2057	2016	41	1577	1.993194e-02	coding only	1	28837107	...	434	1176	2025	1.505005e-05	4.078079e-05	7.022202e-05	-4.153527e+00	...	375	28780908	...	1.302947e-05
TCGA-L5-A8NN-01A-11D-A37C-09	226	222	4	170	1.769912e-02	coding only	1	28837107	...	50	154	217	1.733877e-06	5.340342e-06	7.525027e-06	-5.123492e+00	...	9	28780908	...	3.127073e-07
TCGA-L5-A8NQ-01A-11D-A36J-09	378	369	9	285	2.380952e-02	coding only	1	28837107	...	81	274	369	2.808881e-06	9.501647e-06	1.279601e-05	-4.892925e+00	...	5	28780908	...	1.737263e-07
TCGA-L5-A8NR-01A-11D-A37C-09	343	337	6	251	1.749271e-02	coding only	1	28837107	...	83	231	338	2.878236e-06	8.010512e-06	1.172101e-05	-4.931035e+00	...	18	28780908	...	6.254146e-07
TCGA-L5-A8NS-01A-12D-A37C-09	511	498	13	413	2.544031e-02	coding only	1	28837107	...	84	378	502	2.912914e-06	1.310811e-05	1.740813e-05	-4.759248e+00	...	28	28780908	...	9.728672e-07
TCGA-L5-A8NT-01A-11D-A37C-09	221	220	1	170	4.524887e-03	coding only	1	28837107	...	50	153	215	1.733877e-06	5.305664e-06	7.455672e-06	-5.127513e+00	...	11	28780908	...	3.821978e-07
TCGA-L5-A8NU-01A-11D-A36J-09	130	129	1	99	7.692308e-03	coding only	1	28837107	...	30	86	125	1.040326e-06	2.982269e-06	4.334693e-06	-5.363042e+00	...	9	28780908	...	3.127073e-07
TCGA-L5-A8NV-01A-11D-A37C-09	268	263	5	214	1.865672e-02	coding only	1	28837107	...	48	204	264	1.664522e-06	7.074219e-06	9.154871e-06	-5.038348e+00	...	7	28780908	...	2.432168e-07
TCGA-L5-A8NW-01A-11D-A37C-09	333	331	2	252	6.006006e-03	coding only	1	28837107	...	77	229	327	2.670171e-06	7.941157e-06	1.133956e-05	-4.945404e+00	...	19	28780908	...	6.601599e-07
TCGA-L7-A56G-01A-21D-A27G-09	106	102	4	82	3.773585e-02	coding only	1	28837107	...	20	79	106	6.935508e-07	2.739526e-06	3.675819e-06	-5.434646e+00	...	3	28780908	...	1.042358e-07
TCGA-L7-A6VZ-01A-12D-A33E-09	401	391	10	304	2.493766e-02	coding only	1	28837107	...	86	289	396	2.982269e-06	1.002181e-05	1.373231e-05	-4.862257e+00	...	11	28780908	...	3.821978e-07
TCGA-LN-A49K-01A-11D-A247-09	111	108	3	84	2.702703e-02	coding only	1	28837107	...	24	78	109	8.322610e-07	2.704848e-06	3.779852e-06	-5.422525e+00	...	4	28780908	...	1.389810e-07
TCGA-LN-A49L-01A-11D-A247-09	196	191	5	163	2.551020e-02	coding only	1	28837107	...	27	150	191	9.362936e-07	5.201631e-06	6.623411e-06	-5.178918e+00	...	9	28780908	...	3.127073e-07
TCGA-LN-A49M-01A-21D-A27G-09	286	278	8	208	2.797203e-02	coding only	1	28837107	...	68	198	278	2.358073e-06	6.866153e-06	9.640357e-06	-5.015907e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A49N-01A-11D-A247-09	87	87	0	66	0	coding only	1	28837107	...	20	58	85	6.935508e-07	2.011297e-06	2.947591e-06	-5.530533e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A49O-01A-11D-A247-09	103	99	4	81	3.883495e-02	coding only	1	28837107	...	18	74	103	6.241958e-07	2.566138e-06	3.571787e-06	-5.447114e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A49P-01A-11D-A247-09	95	95	0	79	0	coding only	1	28837107	...	15	74	93	5.201631e-07	2.566138e-06	3.225011e-06	-5.491469e+00	...	4	28780908	...	1.389810e-07
TCGA-LN-A49R-01A-11D-A247-09	156	154	2	131	1.282051e-02	coding only	1	28837107	...	23	121	154	7.975835e-07	4.195983e-06	5.340342e-06	-5.272431e+00	...	8	28780908	...	2.779620e-07
TCGA-LN-A49S-01A-11D-A247-09	204	198	6	145	2.941176e-02	coding only	1	28837107	...	52	141	203	1.803232e-06	4.889533e-06	7.039541e-06	-5.152456e+00	...	4	28780908	...	1.389810e-07
TCGA-LN-A49U-01A-31D-A27G-09	186	183	3	138	1.612903e-02	coding only	1	28837107	...	45	134	185	1.560489e-06	4.646791e-06	6.415345e-06	-5.192780e+00	...	3	28780908	...	1.042358e-07
TCGA-LN-A49V-01A-11D-A247-09	125	123	2	86	1.600000e-02	coding only	1	28837107	...	37	78	124	1.283069e-06	2.704848e-06	4.300015e-06	-5.366530e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A49W-01A-11D-A27G-09	140	136	4	105	2.857143e-02	coding only	1	28837107	...	29	93	137	1.005649e-06	3.225011e-06	4.750823e-06	-5.323231e+00	...	11	28780908	...	3.821978e-07
TCGA-LN-A49X-01A-31D-A27G-09	134	130	4	101	2.985075e-02	coding only	1	28837107	...	29	91	133	1.005649e-06	3.155656e-06	4.612113e-06	-5.336100e+00	...	9	28780908	...	3.127073e-07
TCGA-LN-A49Y-01A-11D-A27G-09	299	295	4	224	1.337793e-02	coding only	1	28837107	...	70	213	293	2.427428e-06	7.386317e-06	1.016052e-05	-4.993084e+00	...	6	28780908	...	2.084715e-07
TCGA-LN-A4A1-01A-21D-A27G-09	193	189	4	150	2.072539e-02	coding only	1	28837107	...	39	141	192	1.352424e-06	4.889533e-06	6.658088e-06	-5.176650e+00	...	8	28780908	...	2.779620e-07
TCGA-LN-A4A2-01A-31D-A27G-09	200	196	4	149	2.000000e-02	coding only	1	28837107	...	47	142	200	1.629844e-06	4.924211e-06	6.935508e-06	-5.158922e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A4A3-01A-11D-A27G-09	117	116	1	93	8.547009e-03	coding only	1	28837107	...	23	89	116	7.975835e-07	3.086301e-06	4.022595e-06	-5.395494e+00	...	3	28780908	...	1.042358e-07
TCGA-LN-A4A4-01A-11D-A27G-09	149	146	3	116	2.013423e-02	coding only	1	28837107	...	30	109	148	1.040326e-06	3.779852e-06	5.132276e-06	-5.289690e+00	...	6	28780908	...	2.084715e-07
TCGA-LN-A4A5-01A-21D-A27G-09	121	119	2	97	1.652893e-02	coding only	1	28837107	...	21	88	118	7.282284e-07	3.051624e-06	4.091950e-06	-5.388070e+00	...	8	28780908	...	2.779620e-07
TCGA-LN-A4A6-01A-11D-A27G-09	159	156	3	128	1.886792e-02	coding only	1	28837107	...	27	117	156	9.362936e-07	4.057272e-06	5.409697e-06	-5.266827e+00	...	9	28780908	...	3.127073e-07
TCGA-LN-A4A8-01A-32D-A27G-09	174	168	6	130	3.448276e-02	exome+100bp flanks	2	35907510	...	37	117	170	1.030425e-06	3.258371e-06	4.734386e-06	-5.324736e+00	...	10	32181537	...	3.107372e-07
TCGA-LN-A4A9-01A-11D-A28B-09	251	250	1	199	3.984064e-03	coding only	1	28837107	...	49	184	242	1.699200e-06	6.380668e-06	8.391965e-06	-5.076136e+00	...	8	28780908	...	2.779620e-07
TCGA-LN-A4MQ-01A-11D-A28B-09	95	93	2	72	2.105263e-02	coding only	1	28837107	...	20	67	93	6.935508e-07	2.323395e-06	3.225011e-06	-5.491469e+00	...	4	28780908	...	1.389810e-07
TCGA-LN-A4MR-01A-11D-A28B-09	198	196	2	157	1.010101e-02	coding only	1	28837107	...	39	147	195	1.352424e-06	5.097599e-06	6.762121e-06	-5.169917e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A5U5-01A-21D-A28B-09	75	74	1	54	1.333333e-02	coding only	1	28837107	...	20	50	75	6.935508e-07	1.733877e-06	2.600816e-06	-5.584890e+00	...	4	28780908	...	1.389810e-07
TCGA-LN-A5U6-01A-11D-A28B-09	123	121	2	101	1.626016e-02	coding only	1	28837107	...	20	86	120	6.935508e-07	2.982269e-06	4.161305e-06	-5.380770e+00	...	12	28780908	...	4.169431e-07
TCGA-LN-A5U7-01A-11D-A31U-09	208	207	1	157	4.807692e-03	coding only	1	28837107	...	49	148	203	1.699200e-06	5.132276e-06	7.039541e-06	-5.152456e+00	...	5	28780908	...	1.737263e-07
TCGA-LN-A7HV-01A-21D-A351-09	156	152	4	121	2.564103e-02	coding only	1	28837107	...	31	113	156	1.075004e-06	3.918562e-06	5.409697e-06	-5.266827e+00	...	8	28780908	...	2.779620e-07
TCGA-LN-A7HW-01A-22D-A351-09	140	138	2	109	1.428571e-02	coding only	1	28837107	...	29	104	138	1.005649e-06	3.606464e-06	4.785501e-06	-5.320073e+00	...	3	28780908	...	1.042358e-07
TCGA-LN-A7HX-01A-11D-A33E-09	307	299	8	240	2.605863e-02	coding only	1	28837107	...	58	231	303	2.011297e-06	8.010512e-06	1.050730e-05	-4.978509e+00	...	7	28780908	...	2.432168e-07
TCGA-LN-A7HY-01A-12D-A351-09	227	223	4	170	1.762115e-02	coding only	1	28837107	...	52	162	222	1.803232e-06	5.617762e-06	7.698414e-06	-5.113599e+00	...	4	28780908	...	1.389810e-07
TCGA-LN-A7HZ-01A-31D-A351-09	115	114	1	85	8.695652e-03	coding only	1	28837107	...	27	77	112	9.362936e-07	2.670171e-06	3.883885e-06	-5.410734e+00	...	6	28780908	...	2.084715e-07
TCGA-LN-A8HZ-01A-11D-A36J-09	229	226	3	176	1.310044e-02	coding only	1	28837107	...	50	154	226	1.733877e-06	5.340342e-06	7.837125e-06	-5.105843e+00	...	19	28780908	...	6.601599e-07
TCGA-LN-A8I0-01A-11D-A36J-09	235	229	6	179	2.553191e-02	coding only	1	28837107	...	49	159	232	1.699200e-06	5.513729e-06	8.045190e-06	-5.094464e+00	...	18	28780908	...	6.254146e-07
TCGA-LN-A8I1-01A-11D-A36J-09	223	219	4	176	1.793722e-02	coding only	1	28837107	...	42	159	219	1.456457e-06	5.513729e-06	7.594382e-06	-5.119508e+00	...	14	28780908	...	4.864336e-07
TCGA-LN-A9FO-01A-11D-A387-09	194	191	3	144	1.546392e-02	coding only	1	28837107	...	45	131	190	1.560489e-06	4.542758e-06	6.588733e-06	-5.181198e+00	...	11	28780908	...	3.821978e-07
TCGA-LN-A9FP-01A-31D-A387-09	543	530	13	409	2.394107e-02	coding only	1	28837107	...	119	394	530	4.126628e-06	1.366295e-05	1.837910e-05	-4.735676e+00	...	5	28780908	...	1.737263e-07
TCGA-LN-A9FQ-01A-31D-A387-09	196	194	2	150	1.020408e-02	coding only	1	28837107	...	43	140	195	1.491134e-06	4.854856e-06	6.762121e-06	-5.169917e+00	...	9	28780908	...	3.127073e-07
TCGA-LN-A9FR-01A-11D-A387-09	169	165	4	140	2.366864e-02	coding only	1	28837107	...	25	113	168	8.669386e-07	3.918562e-06	5.825827e-06	-5.234642e+00	...	26	28780908	...	9.033766e-07
TCGA-M9-A5M8-01A-11D-A28B-09	104	101	3	78	2.884615e-02	coding only	1	28837107	...	23	68	103	7.975835e-07	2.358073e-06	3.571787e-06	-5.447114e+00	...	9	28780908	...	3.127073e-07
TCGA-Q9-A6FU-01A-11D-A31U-09	245	238	7	191	2.857143e-02	coding only	1	28837107	...	46	182	244	1.595167e-06	6.311313e-06	8.461320e-06	-5.072562e+00	...	9	28780908	...	3.127073e-07
TCGA-Q9-A6FW-01A-31D-A31U-09	285	283	2	224	7.017544e-03	coding only	1	28837107	...	58	204	280	2.011297e-06	7.074219e-06	9.709712e-06	-5.012794e+00	...	16	28780908	...	5.559241e-07
TCGA-R6-A6DN-01B-11D-A31U-09	180	178	2	143	1.111111e-02	coding only	1	28837107	...	34	123	176	1.179036e-06	4.265338e-06	6.103247e-06	-5.214439e+00	...	17	28780908	...	5.906693e-07
TCGA-R6-A6DQ-01B-11D-A31U-09	163	161	2	122	1.226994e-02	coding only	1	28837107	...	38	118	160	1.317747e-06	4.091950e-06	5.548407e-06	-5.255832e+00	...	2	28780908	...	6.949051e-08
TCGA-R6-A6KZ-01A-11D-A31U-09	232	228	4	178	1.724138e-02	coding only	1	28837107	...	49	177	230	1.699200e-06	6.137925e-06	7.975835e-06	-5.098224e+00	...	0	28780908	...	0
TCGA-R6-A6L4-01A-11D-A31U-09	170	167	3	134	1.764706e-02	coding only	1	28837107	...	33	130	168	1.144359e-06	4.508081e-06	5.825827e-06	-5.234642e+00	...	2	28780908	...	6.949051e-08
TCGA-R6-A6L6-01B-11D-A33E-09	231	228	3	188	1.298701e-02	coding only	1	28837107	...	40	177	227	1.387102e-06	6.137925e-06	7.871802e-06	-5.103926e+00	...	8	28780908	...	2.779620e-07
TCGA-R6-A6XG-01B-11D-A33E-09	392	386	6	308	1.530612e-02	coding only	1	28837107	...	78	286	382	2.704848e-06	9.917777e-06	1.324682e-05	-4.877888e+00	...	13	28780908	...	4.516883e-07
TCGA-R6-A6XQ-01B-11D-A33E-09	264	257	7	206	2.651515e-02	coding only	1	28837107	...	48	186	257	1.664522e-06	6.450023e-06	8.912128e-06	-5.050019e+00	...	16	28780908	...	5.559241e-07
TCGA-R6-A6Y0-01B-11D-A33E-09	324	314	10	255	3.086420e-02	exome+100bp flanks	2	35907510	...	57	238	313	1.587412e-06	6.628140e-06	8.716839e-06	-5.059641e+00	...	8	32181537	...	2.485897e-07
TCGA-R6-A6Y2-01B-11D-A33E-09	304	293	11	235	3.618421e-02	exome+100bp flanks	2	35907510	...	56	218	300	1.559562e-06	6.071153e-06	8.354798e-06	-5.078064e+00	...	15	32181537	...	4.661058e-07
TCGA-R6-A8W5-01B-11D-A37C-09	199	196	3	148	1.507538e-02	coding only	1	28837107	...	47	139	196	1.629844e-06	4.820178e-06	6.796798e-06	-5.167696e+00	...	7	28780908	...	2.432168e-07
TCGA-R6-A8W8-01B-11D-A37C-09	256	250	6	188	2.343750e-02	coding only	1	28837107	...	62	177	252	2.150008e-06	6.137925e-06	8.738741e-06	-5.058551e+00	...	8	28780908	...	2.779620e-07
TCGA-R6-A8WC-01A-11D-A37C-09	265	261	4	197	1.509434e-02	coding only	1	28837107	...	64	172	262	2.219363e-06	5.964537e-06	9.085516e-06	-5.041650e+00	...	22	28780908	...	7.643956e-07
TCGA-R6-A8WG-01A-11D-A37C-09	244	235	9	179	3.688525e-02	exome+100bp flanks	2	35907510	...	54	167	240	1.503864e-06	4.650838e-06	6.683839e-06	-5.174974e+00	...	10	32181537	...	3.107372e-07
TCGA-RE-A7BO-01A-11D-A33E-09	370	362	8	280	2.162162e-02	coding only	1	28837107	...	82	266	363	2.843558e-06	9.224226e-06	1.258795e-05	-4.900045e+00	...	7	28780908	...	2.432168e-07
TCGA-S8-A6BV-01A-21D-A31U-09	225	222	3	180	1.333333e-02	coding only	1	28837107	...	42	164	222	1.456457e-06	5.687117e-06	7.698414e-06	-5.113599e+00	...	13	28780908	...	4.516883e-07
TCGA-S8-A6BW-01A-11D-A31U-09	204	199	5	156	2.450980e-02	coding only	1	28837107	...	40	139	198	1.387102e-06	4.820178e-06	6.866153e-06	-5.163286e+00	...	14	28780908	...	4.864336e-07
TCGA-V5-A7RB-01A-11D-A351-09	276	271	5	227	1.811594e-02	coding only	1	28837107	...	43	216	272	1.491134e-06	7.490349e-06	9.432292e-06	-5.025383e+00	...	8	28780908	...	2.779620e-07
TCGA-V5-A7RC-01B-11D-A403-09	202	196	6	158	2.970297e-02	coding only	1	28837107	...	38	139	198	1.317747e-06	4.820178e-06	6.866153e-06	-5.163286e+00	...	15	28780908	...	5.211788e-07
TCGA-V5-A7RE-01A-11D-A351-09	226	215	11	160	4.867257e-02	exome+100bp flanks	2	35907510	...	50	140	215	1.392466e-06	3.898906e-06	5.987605e-06	-5.222747e+00	...	14	32181537	...	4.350320e-07
TCGA-V5-AASV-01A-11D-A387-09	210	208	2	165	9.523810e-03	coding only	1	28837107	...	43	123	205	1.491134e-06	4.265338e-06	7.108896e-06	-5.148198e+00	...	37	28780908	...	1.285574e-06
TCGA-V5-AASW-01A-11D-A403-09	225	222	3	163	1.333333e-02	coding only	1	28837107	...	58	147	219	2.011297e-06	5.097599e-06	7.594382e-06	-5.119508e+00	...	12	28780908	...	4.169431e-07
TCGA-V5-AASX-01A-11D-A387-09	428	422	6	315	1.401869e-02	coding only	1	28837107	...	106	299	421	3.675819e-06	1.036859e-05	1.459925e-05	-4.835670e+00	...	10	28780908	...	3.474526e-07
TCGA-VR-A8EO-01A-11D-A36J-09	158	152	6	124	3.797468e-02	exome+100bp flanks	2	35907510	...	27	113	156	7.519318e-07	3.146974e-06	4.344495e-06	-5.362061e+00	...	10	32181537	...	3.107372e-07
TCGA-VR-A8EP-01A-31D-A403-09	132	130	2	109	1.515152e-02	coding only	1	28837107	...	21	101	131	7.282284e-07	3.502432e-06	4.542758e-06	-5.342680e+00	...	7	28780908	...	2.432168e-07
TCGA-VR-A8EQ-01A-11D-A36J-09	351	348	3	269	8.547009e-03	coding only	1	28837107	...	78	241	342	2.704848e-06	8.357288e-06	1.185972e-05	-4.925926e+00	...	20	28780908	...	6.949051e-07
TCGA-VR-A8ER-01A-11D-A36J-09	162	160	2	137	1.234568e-02	coding only	1	28837107	...	23	132	161	7.975835e-07	4.577436e-06	5.583084e-06	-5.253126e+00	...	4	28780908	...	1.389810e-07
TCGA-VR-A8ET-01A-11D-A403-09	62	60	2	49	3.225806e-02	coding only	1	28837107	...	11	40	60	3.814530e-07	1.387102e-06	2.080653e-06	-5.681800e+00	...	7	28780908	...	2.432168e-07
TCGA-VR-A8EU-01A-11D-A36J-09	240	235	5	181	2.083333e-02	coding only	1	28837107	...	53	163	238	1.837910e-06	5.652439e-06	8.253255e-06	-5.083375e+00	...	17	28780908	...	5.906693e-07
TCGA-VR-A8EW-01A-11D-A36J-09	185	182	3	141	1.621622e-02	coding only	1	28837107	...	40	137	182	1.387102e-06	4.750823e-06	6.311313e-06	-5.199880e+00	...	2	28780908	...	6.949051e-08
TCGA-VR-A8EX-01A-11D-A36J-09	293	289	4	231	1.365188e-02	coding only	1	28837107	...	58	223	290	2.011297e-06	7.733092e-06	1.005649e-05	-4.997554e+00	...	6	28780908	...	2.084715e-07
TCGA-VR-A8EY-01A-11D-A36J-09	194	189	5	155	2.577320e-02	coding only	1	28837107	...	33	143	193	1.144359e-06	4.958889e-06	6.692766e-06	-5.174394e+00	...	12	28780908	...	4.169431e-07
TCGA-VR-A8EZ-01A-11D-A36J-09	307	299	8	235	2.605863e-02	coding only	1	28837107	...	64	223	302	2.219363e-06	7.733092e-06	1.047262e-05	-4.979945e+00	...	7	28780908	...	2.432168e-07
TCGA-VR-A8Q7-01A-11D-A37C-09	180	176	4	141	2.222222e-02	coding only	1	28837107	...	33	122	171	1.144359e-06	4.230660e-06	5.929860e-06	-5.226956e+00	...	12	28780908	...	4.169431e-07
TCGA-VR-AA4D-01A-11D-A37C-09	194	189	5	152	2.577320e-02	coding only	1	28837107	...	37	136	190	1.283069e-06	4.716146e-06	6.588733e-06	-5.181198e+00	...	13	28780908	...	4.516883e-07
TCGA-VR-AA4G-01A-11D-A37C-09	191	188	3	148	1.570681e-02	coding only	1	28837107	...	39	140	190	1.352424e-06	4.854856e-06	6.588733e-06	-5.181198e+00	...	8	28780908	...	2.779620e-07
TCGA-VR-AA7B-01A-31D-A403-09	239	235	4	189	1.673640e-02	coding only	1	28837107	...	46	176	234	1.595167e-06	6.103247e-06	8.114545e-06	-5.090736e+00	...	8	28780908	...	2.779620e-07
TCGA-VR-AA7D-01A-11D-A403-09	146	145	1	109	6.849315e-03	coding only	1	28837107	...	36	103	146	1.248392e-06	3.571787e-06	5.062921e-06	-5.295599e+00	...	6	28780908	...	2.084715e-07
TCGA-VR-AA7I-01A-11D-A403-09	106	105	1	84	9.433962e-03	coding only	1	28837107	...	21	78	105	7.282284e-07	2.704848e-06	3.641142e-06	-5.438762e+00	...	5	28780908	...	1.737263e-07
TCGA-X8-AAAR-01A-11D-A403-09	199	196	3	147	1.507538e-02	coding only	1	28837107	...	48	134	194	1.664522e-06	4.646791e-06	6.727443e-06	-5.172150e+00	...	9	28780908	...	3.127073e-07
TCGA-XP-A8T6-01A-11D-A36J-09	235	228	7	167	2.978723e-02	coding only	1	28837107	...	59	158	232	2.045975e-06	5.479052e-06	8.045190e-06	-5.094464e+00	...	9	28780908	...	3.127073e-07
TCGA-XP-A8T7-01A-11D-A36J-09	229	226	3	181	1.310044e-02	coding only	1	28837107	...	44	164	224	1.525812e-06	5.687117e-06	7.767769e-06	-5.109704e+00	...	13	28780908	...	4.516883e-07
TCGA-XP-A8T8-01A-11D-A36J-09	242	240	2	195	8.264463e-03	coding only	1	28837107	...	45	179	241	1.560489e-06	6.207280e-06	8.357288e-06	-5.077935e+00	...	15	28780908	...	5.211788e-07
TCGA-Z6-A8JD-01A-11D-A36J-09	282	275	7	218	2.482270e-02	coding only	1	28837107	...	54	205	276	1.872587e-06	7.108896e-06	9.571002e-06	-5.019043e+00	...	10	28780908	...	3.474526e-07
TCGA-Z6-A8JE-01A-11D-A37C-09	289	287	2	239	6.920415e-03	coding only	1	28837107	...	48	230	286	1.664522e-06	7.975835e-06	9.917777e-06	-5.003586e+00	...	6	28780908	...	2.084715e-07
TCGA-Z6-A9VB-01A-21D-A37C-09	216	214	2	165	9.259259e-03	coding only	1	28837107	...	49	147	215	1.699200e-06	5.097599e-06	7.455672e-06	-5.127513e+00	...	17	28780908	...	5.906693e-07
TCGA-Z6-AAPN-01A-11D-A403-09	442	437	5	354	1.131222e-02	coding only	1	28837107	...	83	343	437	2.878236e-06	1.189440e-05	1.515409e-05	-4.819470e+00	...	6	28780908	...	2.084715e-07
TCGA-ZR-A9CJ-01B-11D-A387-09	218	214	4	169	1.834862e-02	coding only	1	28837107	...	44	154	212	1.525812e-06	5.340342e-06	7.351639e-06	-5.133616e+00	...	10	28780908	...	3.474526e-07
