
R version 2.10.1 (2009-12-14)
Copyright (C) 2009 The R Foundation for Statistical Computing
ISBN 3-900051-07-0

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> source("/xchip/tcga/gdac_prod/applications/process_mgmt/firehose_task_registry/tcga-gdac/GDAC_mergedClustering/broadinstitute.org/cancer.genome.analysis/10572/2/merger_clustering.R")
> result <- main("-w/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506569/GDAC_selectBestcluster_22535183/GBMLGG-TP.bestclus.txt", "-y/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/GBMLGG-TP/22506571/GDAC_selectBestcluster_22516328/GBMLGG-TP.bestclus.txt", "-c/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506572/GDAC_selectBestcluster_22537075/GBMLGG-TP.bestclus.txt", "-d/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/GBMLGG-TP/22506577/GDAC_selectBestcluster_22516360/GBMLGG-TP.bestclus.txt", "-e/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506568/GDAC_selectBestcluster_22537510/GBMLGG-TP.bestclus.txt", "-f/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/GBMLGG-TP/22506564/GDAC_selectBestcluster_22518997/GBMLGG-TP.bestclus.txt", "-g/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22534399/GDAC_selectBestcluster_22572578/GBMLGG-TP.bestclus.txt", "-a/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506544/GDAC_selectBestcluster_22542978/GBMLGG-TP.bestclus.txt", "-iGBMLGG-TP", "-b/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506574/GDAC_selectBestcluster_22538724/GBMLGG-TP.bestclus.txt", "-j/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/GBMLGG-TP/22506546/GDAC_selectBestcluster_22512973/GBMLGG-TP.bestclus.txt", "-l/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506576/GDAC_selectBestcluster_22546646/GBMLGG-TP.bestclus.txt", "-m/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/GBMLGG-TP/22506575/GDAC_selectBestcluster_22516387/GBMLGG-TP.bestclus.txt", "-n/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_CNMFClustering_FH/GBMLGG-TP/22506545/GDAC_selectBestcluster_22535706/GBMLGG-TP.bestclus.txt", "-p/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_pipelineConsensusClusteringPlus/GBMLGG-TP/22506566/GDAC_selectBestcluster_22516330/GBMLGG-TP.bestclus.txt")
[1] "**** cluster demension ***"
[1] "dim(together):"
[1] 1114   15
> q(save="no")
