gene1	gene2	pval	qval
HRAS	Del_3p24.1	0.000114	1
HRAS	Del_3p26.2	0.000203	1
CASP8	3q-Amp	0.000229	1
CASP8	Del_3p14.2	0.000321	1
NOTCH1	Del_11q23.1	0.000393	1
HLA-A	Amp_3q26.33	0.000402	1
CASP8	Del_3p12.1	0.000449	1
TP53	Del_16q23.1	0.000636	1
CASP8	Del_11q23.1	0.000709	1
FAT1	Del_11q23.1	0.000898	1
FGFR3	TP53	0.00103	1
CASP8	Del_3p26.2	0.00119	1
HRAS	Del_11q23.1	0.00134	1
HRAS	Amp_11q13.3	0.0014	1
FAT1	Amp_11q13.3	0.00151	1
FAT1	Amp_18p11.31	0.00181	1
TP53	3q-Amp	0.00201	1
HRAS	3p-Del	0.00211	1
CDKN2A	Del_13q14.2	0.00219	1
CASP8	Del_3p24.1	0.00222	1
TP53	9q-Amp	0.00229	1
TP53	Del_16q23.3	0.00249	1
CASP8	18q-Del	0.00255	1
8p-Del	Amp_20q11.22	0.00283	1
13q-Del	Amp_8q24.21	0.00298	1
MAPK1	TP53	0.00299	1
CASP8	Del_4p16.3	0.00307	1
CASP8	Del_13q14.2	0.00307	1
CASP8	Amp_7q21.3	0.00326	1
NSD1	8q-Amp	0.00334	1
CASP8	Del_4p15.2	0.00344	1
CASP8	Del_5q12.1	0.00344	1
CASP8	Del_5q15	0.00344	1
CASP8	Del_1p13.2	0.00417	1
CASP8	Del_8p23.2	0.00454	1
CASP8	9p-Del	0.00481	1
HRAS	Del_18q23	0.00525	1
ZNF750	Del_18q23	0.00538	1
NOTCH1	Amp_3q26.33	0.00559	1
HUWE1	TP53	0.00566	1
TP53	Del_13q14.2	0.00584	1
NSD1	Amp_8q11.21	0.0059	1
CASP8	Del_7q36.1	0.00602	1
NSD1	Amp_11q13.3	0.00622	1
Amp_7p11.2	Del_14q32.32	0.00645	1
HRAS	Amp_8q24.21	0.00711	1
HRAS	Del_13q12.11	0.00794	1
HUWE1	Amp_7q21.3	0.00809	1
MLL4	Amp_11q13.3	0.00836	1
Amp_7p11.2	Del_11p15.5	0.0088	1
PIK3CA	Amp_7p11.2	0.00904	1
NOTCH1	11q-Del	0.00906	1
TGFBR2	Amp_11q13.3	0.00913	1
PIK3CA	TP53	0.00928	1
DYSF	Amp_8q11.21	0.00945	1
CASP8	Del_13q12.11	0.00947	1
PIK3CA	7p-Amp	0.00989	1
CASP8	Del_5q35.3	0.0104	1
HRAS	Amp_3q26.33	0.0108	1
11p-Del	Amp_7p11.2	0.0112	1
HRAS	Del_4p16.3	0.0113	1
HRAS	Del_4q35.2	0.0113	1
HRAS	Del_13q14.2	0.0113	1
CASP8	TP53	0.0114	1
CASP8	4p-Del	0.0116	1
HRAS	Amp_5p15.33	0.0117	1
HRAS	Del_4p15.2	0.0122	1
EPHA2	Amp_11q13.3	0.0123	1
Amp_9p23	Del_13q12.11	0.0124	1
CASP8	Del_11p15.5	0.0125	1
CASP8	Amp_5p15.33	0.0126	1
HLA-B	Amp_5p12	0.0128	1
EPHA2	Del_3p26.2	0.0135	1
EP300	Amp_9p13.3	0.0136	1
3p-Del	Amp_9p23	0.0138	1
CDKN2A	11p-Del	0.0144	1
NOTCH1	Del_Xp21.3	0.0146	1
CDKN2A	Del_3p14.2	0.0147	1
HRAS	9p-Del	0.0151	1
EPHA2	Amp_5p12	0.0154	1
CASP8	Del_4q35.2	0.0156	1
CDKN2A	18q-Del	0.0156	1
NOTCH1	Amp_7q21.3	0.0158	1
RB1	Amp_11q13.3	0.0161	1
HLA-A	Amp_11q13.3	0.0166	1
FAT1	Del_13q14.2	0.0171	1
KIAA1267	Amp_11q13.3	0.0174	1
Amp_9p13.3	Del_13q14.2	0.0176	1
Amp_9p23	Del_13q14.2	0.0187	1
Amp_20q11.22	Del_9p21.3	0.0189	1
MEFV	Del_9p21.3	0.02	1
TGFBR2	Del_18q23	0.02	1
CASP8	Del_Xp22.2	0.0201	1
Amp_6p12.1	Del_11q23.1	0.0209	1
CASP8	3p-Del	0.0214	1
NOTCH1	3p-Del	0.0219	1
20q-Amp	8p-Del	0.0226	1
TP53	11q-Del	0.0229	1
DYSF	8q-Amp	0.0232	1
Amp_7p11.2	Del_4q21.3	0.0232	1
HLA-B	Amp_3q26.33	0.0233	1
8q-Amp	4p-Del	0.0239	1
HRAS	Del_5q35.3	0.0245	1
NOTCH1	Del_3p12.1	0.0246	1
8q-Amp	4q-Del	0.0249	1
EP300	Del_21q22.3	0.025	1
EPHA2	Del_13q12.11	0.0253	1
CASP8	Del_1p36.21	0.0255	1
HRAS	4p-Del	0.0263	1
TGFBR2	Del_8p23.2	0.0265	1
HLA-B	Amp_18p11.31	0.0269	1
NOTCH1	Del_13q14.2	0.0271	1
THSD7A	Amp_9p13.3	0.0275	1
20p-Amp	8p-Del	0.0276	1
CDKN2A	9q-Amp	0.0281	1
CDKN2A	Del_11q23.1	0.0282	1
PIK3CA	18q-Del	0.0284	1
RB1	TP53	0.0284	1
Amp_7p11.2	Del_16q23.3	0.0292	1
8q-Amp	Del_14q11.2	0.0294	1
CREBBP	Del_11q23.1	0.0299	1
HRAS	Amp_5p12	0.0299	1
HRAS	Del_2q22.1	0.0323	1
MLL4	Amp_5p12	0.0323	1
KIAA1267	Del_3p14.2	0.0333	1
CDKN2A	Del_14q32.32	0.0336	1
NSD1	Amp_9p13.3	0.0339	1
NSD1	Amp_8q24.21	0.0345	1
HLA-B	Amp_11q13.3	0.0348	1
NOTCH1	Del_3p14.2	0.0348	1
3p-Del	Amp_9p24.1	0.0353	1
4p-Del	Amp_8q11.21	0.0357	1
MLL2	20q-Amp	0.036	1
CDKN2A	Del_4q22.1	0.0361	1
CASP8	Del_14q11.2	0.0364	1
KIAA1267	Del_3p12.1	0.0364	1
CASP8	8p-Del	0.0365	1
PIK3CA	Del_Xp22.2	0.0366	1
MAPK1	Amp_11q13.3	0.0367	1
HLA-B	Amp_5p15.33	0.0368	1
NSD1	Amp_12q15	0.0368	1
CASP8	Del_9p21.3	0.038	1
Amp_9p23	Del_11p15.5	0.0383	1
Amp_7p11.2	Del_10q23.31	0.0386	1
KIAA1267	Del_3p24.1	0.0387	1
RAC1	Amp_8q11.21	0.0391	1
HLA-B	5p-Amp	0.0398	1
Amp_9p24.1	Del_13q12.11	0.0401	1
CASP8	11q-Del	0.0403	1
KEAP1	Del_5q15	0.0406	1
FAT1	Del_13q12.11	0.0407	1
CASP8	Del_14q32.32	0.0409	1
RB1	8q-Amp	0.0412	1
EPHA2	Del_3p24.1	0.0422	1
HUWE1	Amp_3q26.33	0.0422	1
3q-Amp	Amp_7p11.2	0.0423	1
PIK3CA	Amp_18p11.31	0.0425	1
Amp_8q11.21	Del_14q11.2	0.0426	1
KEAP1	Del_3p14.2	0.0428	1
CDKN2A	13q-Del	0.0431	1
RAC1	Amp_8q24.21	0.0432	1
NOTCH1	Del_Xp22.2	0.044	1
HLA-B	Amp_8p11.23	0.0445	1
CASP8	Amp_5p12	0.0452	1
EP300	Del_10q23.31	0.0454	1
FGFR3	Del_8p23.2	0.0455	1
RHOA	Del_8p23.2	0.0455	1
HUWE1	Del_Xp21.3	0.0456	1
THSD7A	8p-Del	0.0456	1
EPHA2	5p-Amp	0.0457	1
7p-Amp	Del_13q14.2	0.0466	1
PIK3R1	TP53	0.0472	1
9q-Amp	9p-Del	0.0474	1
DYSF	3q-Amp	0.0475	1
KIAA1267	Del_3p26.2	0.0475	1
CASP8	Amp_18p11.31	0.0477	1
TP53	ZNF750	0.0478	1
FAT1	Del_3p14.2	0.048	1
NOTCH1	11p-Del	0.0483	1
HRAS	Del_1p13.2	0.0487	1
FAT1	SMAD4	0.049	1
FAT1	15q-Del	0.049	1
CASP8	Del_16q23.1	0.0493	1
CDKN2A	11q-Del	0.0495	1
FAT1	11q-Del	0.0495	1
CDKN2A	Del_11p15.5	0.0511	1
CREBBP	Del_16q23.1	0.0516	1
13q-Del	Amp_9p24.1	0.0516	1
NSD1	Amp_20q11.22	0.0525	1
Amp_7p11.2	Del_13q14.2	0.0525	1
HLA-A	Del_3p24.1	0.0528	1
KEAP1	Del_3p24.1	0.0528	1
Amp_9p13.3	Del_16q23.1	0.0533	1
FAT1	Amp_7q21.3	0.0548	1
8p-Amp	8p-Del	0.0557	1
NOTCH1	Del_3p24.1	0.0559	1
PIK3CA	Del_10p15.3	0.0562	1
Amp_9p24.1	Del_1p36.21	0.0566	1
Amp_9p24.1	Del_13q14.2	0.0576	1
TP53	13q-Del	0.0579	1
CASP8	11p-Del	0.0582	1
CASP8	Del_6p25.3	0.0582	1
EPHA2	3p-Del	0.0586	1
CDKN2A	3p-Del	0.0587	1
PIK3CA	3q-Del	0.0595	1
HRAS	11q-Del	0.0596	1
HRAS	Del_7q36.1	0.0596	1
FAT1	Del_6p25.3	0.0597	1
CREBBP	Del_16q23.3	0.0598	1
13q-Del	Amp_9p23	0.0598	1
PIK3CA	Amp_8q24.21	0.061	1
Amp_9p24.1	Del_4p15.2	0.0618	1
BRAF	Del_3p14.2	0.0622	1
MAPK1	Del_8p23.2	0.0622	1
FAT1	ZNF623	0.0632	1
JUB	Del_10q23.31	0.0636	1
3p-Del	Amp_9p13.3	0.0637	1
HRAS	Amp_18p11.31	0.0643	1
Amp_9p13.3	Del_16q23.3	0.0647	1
THSD7A	Amp_9p23	0.0653	1
Amp_9p23	Del_1p36.21	0.0653	1
CASP8	Del_17q25.3	0.0654	1
EP300	Del_13q12.11	0.0654	1
CDKN2A	9p-Del	0.0657	1
CDKN2A	Del_3p12.1	0.0657	1
CDKN2A	9q-Del	0.0662	1
13q-Del	Amp_8q11.21	0.0666	1
NSD1	Del_11q23.1	0.0667	1
PIK3CA	Del_3p24.1	0.0667	1
BRAF	Del_3p12.1	0.067	1
8p-Amp	Del_8p23.2	0.067	1
HLA-A	Del_5q35.3	0.0676	1
KEAP1	Del_5q35.3	0.0676	1
9q-Amp	Del_5q35.3	0.0676	1
JUB	Amp_18q11.2	0.0686	1
CASP8	Amp_12p13.33	0.0687	1
TGFBR2	Amp_12p13.33	0.0691	1
Amp_9p13.3	Del_17q25.3	0.0691	1
EP300	Amp_13q22.1	0.0692	1
7p-Amp	Del_10q23.31	0.0692	1
7p-Amp	Del_11p15.5	0.0692	1
Amp_7p11.2	Del_16q23.1	0.0694	1
HLA-A	Del_3p26.2	0.0701	1
KEAP1	Del_3p26.2	0.0701	1
NOTCH1	Amp_8p11.23	0.0701	1
BRAF	Del_3p24.1	0.0703	1
RB1	Amp_8q24.21	0.0704	1
HLA-A	4p-Del	0.071	1
Amp_9p23	Del_4q35.2	0.072	1
HRAS	Del_5q12.1	0.0721	1
HRAS	Del_5q15	0.0721	1
8p-Amp	Del_5q15	0.0721	1
PIK3CA	Del_7q36.1	0.0728	1
CASP8	Del_10q23.31	0.0729	1
PTEN	TP53	0.073	1
PTEN	8q-Amp	0.073	1
RAC1	TP53	0.073	1
RAC1	8q-Amp	0.073	1
Amp_11p13	Del_1p13.2	0.0737	1
FAT1	Del_18q23	0.0746	1
NOTCH1	Del_10q23.31	0.0747	1
NOTCH1	Del_11p15.5	0.0747	1
NFE2L2	Del_21q22.3	0.075	1
EP300	Del_1p36.21	0.0753	1
EP300	Del_4q21.3	0.0753	1
13q-Del	Amp_7p11.2	0.076	1
DYSF	Del_11q23.1	0.0767	1
Amp_9p23	Del_4p15.2	0.0769	1
NOTCH1	9q-Amp	0.0789	1
HLA-B	Amp_7p11.2	0.079	1
MLL4	5p-Amp	0.0791	1
NOTCH1	8p-Amp	0.0791	1
Amp_9p23	Del_3p24.1	0.0794	1
NFE2L2	Del_19p13.3	0.0796	1
3q-Amp	3p-Del	0.0796	1
CDKN2A	Del_3p24.1	0.0801	1
FAT1	Del_3p24.1	0.0801	1
Amp_9p13.3	Amp_11q13.3	0.0801	1
NFE2L2	Amp_5p15.33	0.0802	1
CASP8	5q-Del	0.0803	1
CASP8	Amp_18q11.2	0.0803	1
Amp_8q11.21	Del_11p15.5	0.0806	1
THSD7A	Amp_18q11.2	0.0808	1
20p-Amp	Del_Xp21.3	0.0808	1
HLA-B	Amp_7q21.3	0.0812	1
EP300	21q-Del	0.0818	1
FAT1	Amp_8q11.21	0.0829	1
BRAF	Del_3p26.2	0.0831	1
TP53	Amp_20q11.22	0.0833	1
CASP8	5p-Amp	0.0842	1
NOTCH1	Amp_18q11.2	0.0852	1
C3orf59	Del_18q23	0.0857	1
FGFR3	Del_18q23	0.0857	1
HLA-A	Amp_9p13.3	0.0867	1
FAT1	Del_4p15.2	0.0869	1
Amp_11p13	Del_7q36.1	0.0877	1
Amp_11p13	Del_19p13.3	0.0877	1
Amp_8q11.21	Amp_15q26.3	0.0885	1
FAT1	18q-Del	0.0888	1
HRAS	Del_10q23.31	0.0889	1
HRAS	Del_11p15.5	0.0889	1
3q-Amp	Amp_6p12.1	0.0891	1
EP300	Del_4q35.2	0.0895	1
FAT1	Amp_9p23	0.0902	1
EPHA2	Amp_7q21.3	0.0904	1
Amp_20q11.22	Del_Xp21.3	0.0909	1
KEAP1	18q-Del	0.0912	1
HUWE1	Amp_12q15	0.0913	1
MLL2	10p-Del	0.0913	1
IRS4	Amp_8q24.21	0.0915	1
MLL4	Amp_5p15.33	0.0916	1
PIK3CA	Amp_11q13.3	0.0919	1
FBXW7	Amp_Xq28	0.0926	1
EP300	TP53	0.0927	1
NOTCH1	ZNF750	0.0927	1
TP53	Del_10q23.31	0.0927	1
ZNF750	Del_2q22.1	0.0927	1
ADAM19	Del_11q23.1	0.0932	1
9p-Del	Amp_9p23	0.0934	1
EPHA2	Del_18q23	0.0935	1
8q-Amp	8p-Del	0.094	1
HRAS	20p-Amp	0.095	1
HRAS	5q-Del	0.095	1
HRAS	Amp_18q11.2	0.095	1
EP300	Del_4p15.2	0.0952	1
EP300	Del_5q12.1	0.0952	1
EP300	Del_5q15	0.0952	1
HRAS	5p-Amp	0.0952	1
CDKN2A	NSD1	0.0955	1
PIK3CA	Del_9p21.3	0.0961	1
CASP8	Amp_8p11.23	0.0983	1
11q-Del	Amp_9p24.1	0.0988	1
Amp_9p24.1	Del_19p13.3	0.0988	1
FBXW7	Amp_13q22.1	0.0996	1
7p-Amp	13q-Del	0.0996	1
TGFBR2	Amp_8q24.21	0.0998	1
ASXL1	CDKN2A	0.1	1
CDKN2A	1q-Amp	0.1	1
EPHA2	Del_1p13.2	0.1	1
FAT1	Del_14q32.32	0.101	1
HUWE1	Amp_5p15.33	0.102	1
NOTCH1	Del_3p26.2	0.102	1
ZNF750	18q-Del	0.102	1
EPHA2	Del_3p14.2	0.103	1
FAT1	9q-Amp	0.103	1
Amp_7p11.2	Del_11q23.1	0.103	1
CASP8	Amp_2q11.2	0.104	1
CASP8	Amp_6q12	0.104	1
CASP8	Del_7q31.1	0.104	1
MLL2	21q-Del	0.104	1
CASP8	Del_2q36.2	0.105	1
EP300	Amp_5p12	0.105	1
FAT1	MAPK1	0.105	1
FAT1	Del_3p12.1	0.105	1
HRAS	Amp_8q11.21	0.105	1
NOTCH1	12p-Amp	0.105	1
NOTCH1	Del_14q32.32	0.105	1
12p-Amp	Del_10q23.31	0.105	1
4q-Del	Amp_8q11.21	0.105	1
CASP8	Amp_20q11.22	0.106	1
EPHA2	Del_10p15.3	0.106	1
HLA-A	Amp_7p11.2	0.106	1
HLA-B	11q-Del	0.106	1
HRAS	Amp_8p11.23	0.106	1
Amp_20q11.22	Del_2q22.1	0.106	1
CASP8	Amp_Xq28	0.107	1
RASA1	Amp_8q11.21	0.107	1
HRAS	Amp_2q31.2	0.108	1
NOTCH1	4p-Del	0.108	1
Amp_12q15	Del_16q23.1	0.108	1
DYSF	Amp_9p13.3	0.109	1
EP300	Del_3p24.1	0.109	1
NOTCH1	Amp_6q12	0.109	1
BRAF	Del_18q23	0.11	1
CDKN2A	Del_7q36.1	0.11	1
KIAA1267	3p-Del	0.11	1
EPHA2	Del_21q22.3	0.111	1
HLA-A	Del_1p13.2	0.111	1
NOTCH1	Amp_18p11.31	0.111	1
HRAS	Amp_7p11.2	0.112	1
HRAS	Amp_20q11.22	0.112	1
HLA-B	Del_13q12.11	0.113	1
JUB	Amp_9p13.3	0.113	1
NSD1	Amp_9p23	0.113	1
TGFBR2	Del_13q12.11	0.113	1
CASP8	Del_4q22.1	0.114	1
Amp_11q13.3	Del_4q35.2	0.114	1
EPHA2	Del_3p12.1	0.115	1
HUWE1	Del_8p23.2	0.115	1
11q-Del	Amp_9p23	0.115	1
Amp_9p23	Del_19p13.3	0.115	1
C3orf59	Amp_5p15.33	0.116	1
HLA-B	TP53	0.116	1
HRAS	Amp_Xq28	0.116	1
HRAS	Del_Xp22.2	0.116	1
RHOA	Del_11q23.1	0.116	1
TGFBR2	TP53	0.116	1
CASP8	13q-Del	0.117	1
EPHA2	Del_7q36.1	0.117	1
HRAS	MLL2	0.117	1
KDM6A	Amp_20q11.22	0.117	1
Amp_8q11.21	Del_2q36.2	0.117	1
EP300	Del_4q22.1	0.118	1
FAT1	Amp_6p12.1	0.118	1
HLA-B	Amp_9p24.1	0.118	1
NSD1	3q-Amp	0.118	1
TGFBR2	Amp_9p24.1	0.118	1
PIK3CA	Amp_5p15.33	0.119	1
PIK3CA	Del_3p14.2	0.119	1
PTPN14	5p-Amp	0.119	1
FAT1	Del_10q23.31	0.12	1
HRAS	Del_9p21.3	0.12	1
HUWE1	Amp_7p11.2	0.12	1
PIK3CA	Del_18q23	0.12	1
SMAD4	Amp_7p11.2	0.12	1
3q-Amp	3q-Del	0.12	1
11p-Del	Amp_9p23	0.121	1
Amp_9p23	Del_6p25.3	0.121	1
Amp_12q15	Del_16q23.3	0.121	1
CREBBP	PIK3CA	0.122	1
MLL4	Amp_12p13.33	0.122	1
Amp_8q24.21	Del_10p15.3	0.122	1
Amp_9p24.1	Del_5q35.3	0.122	1
Amp_9p13.3	Del_4q22.1	0.122	1
Amp_13q22.1	Del_18q23	0.122	1
ASXL1	NSD1	0.123	1
NOTCH1	Del_4q35.2	0.123	1
Amp_2q31.2	Del_13q14.2	0.123	1
CASP8	Del_21q22.3	0.124	1
HRAS	13q-Del	0.124	1
HRAS	Amp_13q22.1	0.124	1
PTEN	Amp_18p11.31	0.124	1
RAC1	Amp_18p11.31	0.124	1
HLA-A	Del_3p14.2	0.125	1
NSD1	14q-Amp	0.125	1
Amp_12q15	Del_13q14.2	0.125	1
Amp_2q31.2	Del_14q32.32	0.126	1
Amp_9p23	Del_3p14.2	0.126	1
Del_8p23.2	Del_16q23.3	0.126	1
HLA-B	Del_11q23.1	0.127	1
HUWE1	MLL2	0.127	1
RHOA	TP53	0.127	1
ASXL1	Amp_8p11.23	0.128	1
ASXL1	Amp_8q11.21	0.128	1
CASP8	Del_Xp21.3	0.128	1
CUL3	Amp_8p11.23	0.128	1
CUL3	Amp_8q11.21	0.128	1
EP300	5p-Amp	0.128	1
IRS4	Amp_8q11.21	0.128	1
RAC1	Del_4p16.3	0.128	1
THSD7A	Del_2q22.1	0.128	1
CASP8	Amp_8q24.21	0.129	1
KEAP1	Del_19p13.3	0.129	1
EPHA2	Del_16q23.1	0.13	1
RASA1	Del_11q23.1	0.13	1
4p-Del	Amp_9p24.1	0.13	1
CASP8	7q-Amp	0.131	1
CASP8	Xp-Del	0.131	1
HLA-B	Amp_9p23	0.131	1
TGFBR2	Amp_9p23	0.131	1
HRAS	THSD7A	0.132	1
HRAS	Del_1p36.21	0.132	1
HRAS	Del_4q21.3	0.132	1
HUWE1	Amp_12p13.33	0.132	1
Amp_8q11.21	Del_10p15.3	0.132	1
CDKN2A	Del_2q22.1	0.133	1
CUL3	Amp_20q11.22	0.133	1
Amp_9p23	Del_16q23.1	0.133	1
CASP8	Del_19p13.3	0.134	1
JUB	Del_14q32.32	0.134	1
MLL2	Amp_9p13.3	0.134	1
NOTCH1	Del_4p15.2	0.134	1
PIK3CA	7q-Amp	0.134	1
PIK3CA	Xp-Del	0.134	1
EP300	11p-Del	0.135	1
EP300	Del_6p25.3	0.135	1
EP300	Del_9q21.11	0.135	1
ZNF750	Del_21q22.3	0.135	1
Amp_12q15	Del_10q23.31	0.135	1
HUWE1	Amp_18q11.2	0.136	1
PIK3R1	Amp_3q26.33	0.136	1
10p-Del	Amp_12p13.33	0.136	1
CDKN2A	5q-Del	0.137	1
FAT1	Del_4p16.3	0.138	1
HLA-A	Del_3p12.1	0.138	1
KEAP1	Del_3p12.1	0.138	1
PIK3CA	10p-Del	0.138	1
FAT1	Amp_11p13	0.139	1
ZNF623	Amp_5p12	0.139	1
ZNF623	Del_9p21.3	0.139	1
NOTCH1	13q-Del	0.14	1
NOTCH1	Amp_9p23	0.14	1
NOTCH1	Del_13q12.11	0.14	1
PIK3CA	11p-Del	0.14	1
CASP8	21q-Del	0.141	1
EP300	Del_9p21.3	0.141	1
HLA-B	Del_13q14.2	0.141	1
MEFV	Del_18q23	0.141	1
FGFR3	Amp_8q24.21	0.142	1
HLA-A	Amp_9p24.1	0.142	1
ADAM19	Amp_7p11.2	0.143	1
CDKN2A	Del_16q23.1	0.143	1
CREBBP	Del_14q32.32	0.143	1
EPHA2	Del_16q23.3	0.143	1
FAT1	Amp_9p24.1	0.143	1
IRS4	TP53	0.143	1
PIK3CA	Del_21q22.3	0.143	1
ZNF623	Amp_7p11.2	0.143	1
11q-Del	Amp_9p13.3	0.143	1
4p-Del	Amp_9p13.3	0.143	1
Amp_12p13.33	Del_7q36.1	0.143	1
BRAF	Amp_5p15.33	0.144	1
MAPK1	Del_11q23.1	0.144	1
C3orf59	NOTCH1	0.145	1
PIK3CA	9p-Del	0.145	1
Amp_9p23	Del_5q35.3	0.145	1
CDKN2A	DYSF	0.146	1
FAT1	Amp_6q12	0.146	1
MLL4	TP53	0.146	1
TGFBR2	Amp_3q26.33	0.146	1
TGFBR2	Del_11p15.5	0.146	1
9q-Amp	Del_13q12.11	0.146	1
CDKN2A	Del_2q36.2	0.147	1
FBXW7	Amp_7q21.3	0.147	1
13q-Del	Amp_7q21.3	0.147	1
EPHA2	Amp_5p15.33	0.148	1
NOTCH1	7q-Amp	0.148	1
NOTCH1	Xp-Del	0.148	1
RAC1	Amp_11q13.3	0.148	1
CDKN2A	PTEN	0.149	1
FAT1	PTEN	0.149	1
NSD1	20p-Amp	0.149	1
Amp_9p13.3	Del_4p15.2	0.149	1
HRAS	4q-Del	0.15	1
20p-Amp	Amp_11q13.3	0.15	1
EP300	Del_3p26.2	0.151	1
EPHA2	20q-Amp	0.151	1
Amp_8q11.21	Del_4p15.2	0.151	1
NFE2L2	Amp_20q11.22	0.152	1
NOTCH1	Del_10p15.3	0.152	1
CDKN2A	Del_5q12.1	0.153	1
NFE2L2	Amp_13q22.1	0.153	1
RASA1	Amp_12p13.33	0.153	1
4p-Del	Amp_9p23	0.153	1
Amp_9p24.1	Del_11p15.5	0.153	1
CASP8	4q-Del	0.154	1
HLA-B	Amp_18q11.2	0.154	1
KRTAP5-5	Amp_3q26.33	0.154	1
NFE2L2	Amp_5p12	0.155	1
RAC1	5p-Amp	0.156	1
9q-Amp	Del_16q23.3	0.156	1
Amp_6q12	Del_7q36.1	0.156	1
Amp_11p13	Del_Xp22.2	0.156	1
PIK3CA	RASA1	0.157	1
RAC1	Del_18q23	0.157	1
EPHA2	Del_4p16.3	0.158	1
EPHA2	Del_4q35.2	0.158	1
NOTCH1	Del_1p36.21	0.158	1
EPHA2	Del_10q23.31	0.159	1
EPHA2	Del_11p15.5	0.159	1
3q-Amp	Amp_7q21.3	0.159	1
7p-Amp	Del_5q12.1	0.159	1
7p-Amp	Del_5q15	0.159	1
HRAS	Del_14q11.2	0.161	1
8q-Amp	13q-Del	0.161	1
21q-Del	Del_14q32.32	0.161	1
HRAS	Amp_12p13.33	0.162	1
IRS4	Del_3p14.2	0.162	1
NFE2L2	Amp_8q11.21	0.162	1
ZNF750	Amp_8q11.21	0.162	1
NFE2L2	10p-Del	0.163	1
NFE2L2	Del_4q21.3	0.163	1
HLA-A	3q-Amp	0.164	1
MLL4	8p-Del	0.164	1
BRAF	3p-Del	0.165	1
CASP8	1q-Amp	0.165	1
CREBBP	Del_1p13.2	0.165	1
EPHA2	Del_4p15.2	0.165	1
KDM6A	Del_10p11.21	0.165	1
MAPK1	3p-Del	0.165	1
OR6C65	Del_2q22.1	0.165	1
7p-Amp	Amp_11p13	0.165	1
8q-Amp	Del_4p15.2	0.165	1
5q-Del	Amp_9p24.1	0.165	1
Amp_5p12	Del_Xp22.2	0.165	1
PIK3CA	Del_10p11.21	0.166	1
RAC1	Amp_8p11.23	0.166	1
C3orf59	Amp_5p12	0.167	1
EPHA2	20p-Amp	0.167	1
FAT1	Amp_8q24.21	0.167	1
NLRP8	Del_1p13.2	0.167	1
HUWE1	5p-Amp	0.168	1
ZNF623	Del_3p14.2	0.168	1
5p-Amp	8p-Del	0.168	1
9p-Del	Del_Xq21.33	0.168	1
EP300	Del_3p14.2	0.169	1
EP300	Del_8p23.2	0.169	1
RAC1	Amp_3q26.33	0.169	1
EP300	Del_5q35.3	0.171	1
HLA-A	Amp_5p15.33	0.171	1
HRAS	18q-Del	0.171	1
HRAS	Del_14q32.32	0.171	1
HUWE1	Del_Xp22.2	0.171	1
KEAP1	Del_11q23.1	0.171	1
MLL4	11q-Del	0.171	1
MLL4	Del_19p13.3	0.171	1
OR6C65	Amp_9p13.3	0.171	1
PTPN14	Amp_9p13.3	0.171	1
TGFBR2	Amp_2q31.2	0.171	1
8p-Del	Del_Xp22.2	0.171	1
HLA-A	Del_10q23.31	0.172	1
HLA-A	Del_11p15.5	0.172	1
NFE2L2	21q-Del	0.172	1
CDKN2A	ZNF233	0.174	1
NLRP8	Del_10p15.3	0.174	1
7q-Amp	Del_4q22.1	0.174	1
Amp_11p13	Del_1p36.21	0.174	1
Amp_11p13	Del_Xp21.3	0.174	1
Amp_11q13.3	Del_2q36.2	0.174	1
Amp_8p11.23	Del_10p15.3	0.175	1
NOTCH1	NUDT11	0.176	1
ZNF623	Del_13q12.11	0.176	1
8q-Amp	Del_9q21.11	0.176	1
HLA-A	Del_4p16.3	0.177	1
HLA-A	Del_4q35.2	0.177	1
HLA-A	Del_13q14.2	0.177	1
7p-Amp	11p-Del	0.177	1
13q-Del	Amp_12q15	0.177	1
HUWE1	NSD1	0.178	1
ZNF750	20q-Amp	0.178	1
8q-Amp	Del_10p15.3	0.178	1
Amp_8q11.21	Del_9p21.3	0.178	1
MEFV	Amp_5p15.33	0.179	1
VEZF1	Del_11q23.1	0.179	1
ZNF623	Del_3p12.1	0.179	1
8p-Amp	Del_10p11.21	0.179	1
Amp_7q21.3	Del_13q14.2	0.179	1
TGFBR2	Amp_Xq28	0.18	1
TGFBR2	Del_Xp22.2	0.18	1
ZNF233	Del_18q23	0.18	1
EP300	4p-Del	0.181	1
FAT1	Del_Xq21.33	0.181	1
HLA-A	5q-Del	0.181	1
HUWE1	7q-Amp	0.181	1
HUWE1	Xp-Del	0.181	1
HUWE1	Amp_15q26.3	0.181	1
JUB	Del_19p13.3	0.181	1
KEAP1	5q-Del	0.181	1
KIAA1267	TP53	0.181	1
NLRP8	8p-Del	0.181	1
NOTCH1	3q-Amp	0.181	1
9q-Amp	5q-Del	0.181	1
FAT1	Del_16q23.3	0.182	1
JUB	Amp_5p15.33	0.182	1
PIK3CA	PTPN14	0.183	1
PIK3CA	Amp_7q21.3	0.183	1
Amp_9p23	Del_4p16.3	0.183	1
EPHA2	Amp_2q31.2	0.184	1
FBXW7	Amp_5p12	0.184	1
HLA-A	Del_4p15.2	0.184	1
HLA-A	Del_5q12.1	0.184	1
HLA-A	Del_5q15	0.184	1
IRS4	Del_3p24.1	0.184	1
MLL4	Del_18q23	0.184	1
PTEN	Amp_8q11.21	0.184	1
EPHA2	9p-Del	0.185	1
JUB	5p-Amp	0.185	1
NOTCH1	Del_19p13.3	0.185	1
RASA1	Amp_11q13.3	0.185	1
8p-Del	Amp_13q22.1	0.185	1
DYSF	Amp_9p23	0.186	1
PIK3CA	Del_3p26.2	0.186	1
5q-Del	Amp_9p23	0.186	1
Amp_9p23	Amp_13q34	0.186	1
FAT1	Del_17q25.3	0.187	1
THSD7A	11p-Del	0.187	1
ZNF623	Del_3p24.1	0.187	1
ZNF750	Del_11p15.5	0.187	1
MAPK1	Amp_8q24.21	0.188	1
NUDT11	8q-Amp	0.188	1
HRAS	Amp_7q21.3	0.189	1
HUWE1	Amp_8p11.23	0.189	1
KIAA1267	3q-Amp	0.19	1
PTPN14	Amp_7q21.3	0.19	1
RASA1	Amp_8q24.21	0.19	1
Amp_3q26.33	Amp_8q11.21	0.19	1
Amp_13q22.1	Del_17q25.3	0.19	1
EP300	Del_3p12.1	0.191	1
TP53	Amp_9p24.1	0.191	1
C3orf59	Del_9p21.3	0.192	1
FGFR3	Del_9p21.3	0.192	1
PIK3CA	Del_11q23.1	0.192	1
ZNF750	Amp_18p11.31	0.192	1
9p-Del	Amp_9p24.1	0.192	1
SMAD4	9p-Del	0.193	1
14q-Amp	Del_14q32.32	0.193	1
10p-Del	Amp_8q24.21	0.193	1
Amp_9p23	Del_5q15	0.193	1
EPHA2	Amp_Xq28	0.194	1
EPHA2	Del_Xp22.2	0.194	1
KIAA1267	Amp_18p11.31	0.195	1
MLL4	Del_9p21.3	0.195	1
11q-Del	Amp_13q22.1	0.195	1
HLA-B	Del_3p14.2	0.196	1
TGFBR2	Amp_8p11.23	0.196	1
CASP8	20q-Amp	0.197	1
HUWE1	Del_10p15.3	0.197	1
IRS4	Del_9p21.3	0.197	1
3q-Amp	Del_8p23.2	0.197	1
EMG1	TP53	0.199	1
HLA-A	Amp_2q31.2	0.199	1
HUWE1	KDM6A	0.199	1
TGFBR2	8q-Amp	0.199	1
9q-Amp	Amp_2q31.2	0.199	1
ADAM19	Del_4q35.2	0.2	1
BRAF	Amp_5p12	0.2	1
HUWE1	Del_11q23.1	0.2	1
TGFBR2	THSD7A	0.2	1
TGFBR2	Del_1p36.21	0.2	1
TGFBR2	Del_Xp21.3	0.2	1
ZNF233	Amp_8q11.21	0.2	1
ZNF623	Del_4q35.2	0.2	1
CASP8	NSD1	0.202	1
CASP8	Del_10p11.21	0.202	1
FAT1	Amp_Xq28	0.202	1
MEFV	3p-Del	0.202	1
PIK3CA	PIK3R1	0.202	1
12p-Amp	18q-Del	0.202	1
Amp_12q15	Del_5q35.3	0.202	1
JUB	Amp_9p24.1	0.203	1
BRAF	Amp_7p11.2	0.204	1
CDKN2A	Amp_18p11.31	0.204	1
CDKN2A	Del_2q21.2	0.204	1
EPHA2	13q-Del	0.204	1
EPHA2	Amp_13q22.1	0.204	1
FBXW7	Amp_5p15.33	0.204	1
HUWE1	Del_3p26.2	0.204	1
HUWE1	Del_3p14.2	0.204	1
IRS4	Del_1p13.2	0.204	1
IRS4	Del_2q36.2	0.204	1
JUB	Amp_8p11.23	0.204	1
MAPK1	Amp_7p11.2	0.204	1
NLRP8	Del_16q23.1	0.204	1
OR6C65	Del_1p13.2	0.204	1
OR6C65	Del_2q36.2	0.204	1
PTPN14	Del_2q36.2	0.204	1
SMAD4	5p-Amp	0.204	1
Amp_9p13.3	Del_13q12.11	0.204	1
KIAA1267	Del_5q12.1	0.205	1
KIAA1267	Del_5q15	0.205	1
ZNF623	Del_5q12.1	0.205	1
ZNF623	Del_5q15	0.205	1
18q-Del	Del_16q23.3	0.205	1
CASP8	3q-Del	0.207	1
PTEN	Del_2q22.1	0.207	1
RHOA	Del_13q12.11	0.207	1
3q-Amp	Amp_6q12	0.207	1
Del_8p23.2	Del_14q32.32	0.207	1
CREBBP	TP53	0.208	1
HRAS	11p-Del	0.208	1
HRAS	Amp_12q15	0.208	1
HRAS	Del_6p25.3	0.208	1
HRAS	Del_9q21.11	0.208	1
MLL2	Del_18q23	0.208	1
8p-Amp	Del_9q21.11	0.208	1
HLA-A	3p-Del	0.209	1
HLA-A	Amp_Xq28	0.209	1
HRAS	Del_2q36.2	0.209	1
JUB	9q-Amp	0.209	1
KEAP1	3p-Del	0.209	1
KEAP1	Amp_Xq28	0.209	1
MLL2	NUDT11	0.209	1
PIK3CA	Amp_2q31.2	0.209	1
EP300	5q-Del	0.211	1
C3orf59	Del_3p14.2	0.212	1
C3orf59	Del_8p23.2	0.212	1
NSD1	7p-Amp	0.212	1
OR6C65	Del_10p15.3	0.212	1
PTPN14	Del_4q22.1	0.212	1
TP53	8p-Amp	0.213	1
Del_2q22.1	Del_10q23.31	0.213	1
EPHA2	10p-Del	0.214	1
EPHA2	Del_1p36.21	0.214	1
EPHA2	Del_Xp21.3	0.214	1
JUB	Amp_20q11.22	0.214	1
RAC1	Amp_5p15.33	0.214	1
RAC1	Amp_9p13.3	0.214	1
RAC1	Amp_12p13.33	0.214	1
RHOA	Amp_3q26.33	0.214	1
3q-Del	Amp_9p13.3	0.214	1
Amp_7p11.2	Del_5q15	0.214	1
Amp_9p23	Del_3p26.2	0.214	1
HLA-B	Del_3p12.1	0.215	1
15q-Del	Amp_8p11.23	0.215	1
Amp_18p11.31	Del_7q31.1	0.215	1
ZNF623	Del_3p26.2	0.216	1
Amp_20q11.22	Del_7q36.1	0.216	1
ASXL1	8q-Amp	0.217	1
CUL3	8q-Amp	0.217	1
IRS4	8q-Amp	0.217	1
Amp_9p24.1	Amp_13q22.1	0.217	1
CASP8	Amp_7p11.2	0.218	1
EP300	Del_4p16.3	0.218	1
EP300	Del_13q14.2	0.218	1
NFE2L2	Amp_6p12.1	0.218	1
8p-Amp	Del_9p21.3	0.218	1
CDKN2A	SMAD4	0.219	1
CDKN2A	Del_3p26.2	0.219	1
CREBBP	9q-Amp	0.219	1
CUL3	HUWE1	0.219	1
FAT1	Del_3p26.2	0.219	1
HLA-A	7p-Amp	0.219	1
HLA-A	13q-Del	0.219	1
HLA-A	Amp_13q22.1	0.219	1
HRAS	Del_4q22.1	0.219	1
HUWE1	OR6C65	0.219	1
NFE2L2	TP53	0.219	1
OR6C65	Del_21q22.3	0.219	1
Amp_11p13	Del_2q22.1	0.219	1
NLRP8	Amp_9p23	0.22	1
CDKN2A	Del_13q12.11	0.221	1
PIK3CA	Del_3p12.1	0.221	1
PTEN	18q-Del	0.221	1
Amp_17q12	Amp_20q11.22	0.221	1
CREBBP	Amp_8p11.23	0.222	1
HLA-B	8p-Amp	0.222	1
HRAS	Del_17q25.3	0.222	1
MLL2	Del_Xp21.3	0.222	1
NAP1L2	Amp_5p15.33	0.222	1
TGFBR2	8p-Amp	0.222	1
ZNF623	9p-Del	0.222	1
Amp_8p11.23	Amp_13q22.1	0.222	1
Del_4q35.2	Del_7q31.1	0.222	1
CDKN2A	Del_4p16.3	0.223	1
HUWE1	11q-Del	0.223	1
KDM6A	Del_16q23.1	0.223	1
NOTCH1	Del_14q11.2	0.223	1
EP300	Amp_12p13.33	0.224	1
FAT1	KRT17	0.224	1
HRAS	8q-Amp	0.224	1
Amp_9p13.3	Del_11p15.5	0.224	1
Amp_12p13.33	Del_10q23.31	0.224	1
EP300	Amp_11q13.3	0.225	1
EPHA2	21q-Del	0.225	1
EPHA2	Amp_20q11.22	0.225	1
NOTCH1	Del_16q23.1	0.225	1
NSD1	Amp_9p24.1	0.225	1
TP53	Del_17q25.3	0.225	1
Amp_8q11.21	Del_4p16.3	0.225	1
Amp_9p24.1	Del_2q36.2	0.225	1
DYSF	Amp_5p15.33	0.226	1
4p-Del	Amp_8q24.21	0.226	1
ASXL1	Del_7q36.1	0.227	1
C3orf59	Amp_18p11.31	0.227	1
FGFR3	Amp_18p11.31	0.227	1
HUWE1	Amp_5p12	0.227	1
JUB	Amp_9p23	0.227	1
FAT1	13q-Del	0.228	1
FAT1	Amp_13q22.1	0.228	1
HLA-B	Del_3p24.1	0.228	1
IRS4	Amp_11q13.3	0.228	1
CASP8	20p-Amp	0.229	1
KEAP1	Del_4q21.3	0.229	1
TGFBR2	Amp_7p11.2	0.229	1
ZNF750	9p-Del	0.229	1
20q-Amp	7q-Amp	0.229	1
5q-Del	Del_2q22.1	0.229	1
Amp_11p13	Del_11q23.1	0.229	1
CDKN2A	Del_10q23.31	0.23	1
HRAS	8p-Del	0.23	1
HRAS	Del_21q22.3	0.23	1
MLL2	Del_10p15.3	0.23	1
NSD1	9q-Amp	0.23	1
C3orf59	Del_4q35.2	0.232	1
CASP8	Del_Xq21.33	0.232	1
FGFR3	Del_4p16.3	0.232	1
HUWE1	Del_3p12.1	0.232	1
KRTAP5-5	Amp_11q13.3	0.232	1
RHOA	Del_4p16.3	0.232	1
RHOA	Del_13q14.2	0.232	1
CREBBP	Amp_20q11.22	0.233	1
EMG1	Del_9p21.3	0.233	1
FGFR3	Del_3p24.1	0.233	1
ZNF623	5p-Amp	0.233	1
Amp_8q24.21	Del_10q23.31	0.233	1
TGFBR2	Del_14q11.2	0.234	1
PTEN	Amp_7q21.3	0.235	1
ZNF750	13q-Del	0.235	1
ZNF750	Amp_13q22.1	0.235	1
PTPN14	Amp_5p12	0.236	1
EPHA2	4q-Del	0.237	1
HLA-B	MLL2	0.237	1
HUWE1	Amp_8q24.21	0.237	1
CASP8	Amp_12q15	0.238	1
CASP8	Del_9q21.11	0.238	1
EP300	Amp_15q26.3	0.238	1
FGFR3	Del_4p15.2	0.238	1
PIK3CA	Del_16q23.3	0.238	1
RHOA	Del_4p15.2	0.238	1
RHOA	Del_5q12.1	0.238	1
RHOA	Del_5q15	0.238	1
15q-Del	Amp_11q13.3	0.238	1
Del_2q21.2	Del_10q23.31	0.238	1
CDKN2A	RB1	0.239	1
EP300	Amp_7p11.2	0.239	1
BRAF	TP53	0.24	1
KDM6A	Amp_9p23	0.24	1
KDM6A	Del_16q23.3	0.24	1
MEFV	Amp_5p12	0.24	1
MLL4	Amp_18p11.31	0.24	1
PIK3R1	Amp_5p12	0.24	1
Amp_8q11.21	Del_4q22.1	0.24	1
DYSF	JUB	0.241	1
DYSF	Amp_Xq28	0.241	1
BRAF	Del_13q12.11	0.242	1
FBXW7	Amp_9p23	0.242	1
8p-Amp	Del_19p13.3	0.242	1
ASXL1	Amp_7p11.2	0.243	1
EPHA2	Del_5q35.3	0.243	1
MEFV	Amp_11q13.3	0.243	1
PIK3CA	Amp_9p13.3	0.243	1
PTPN14	Amp_7p11.2	0.243	1
SMAD4	Amp_8q24.21	0.243	1
Amp_12q15	Del_3p26.2	0.243	1
ASXL1	Amp_9p24.1	0.244	1
CDKN2A	Del_5q15	0.244	1
PIK3R1	Amp_7p11.2	0.244	1
Amp_2q31.2	Amp_8q11.21	0.244	1
HUWE1	Del_4q35.2	0.245	1
NFE2L2	11p-Del	0.245	1
NFE2L2	Del_6p25.3	0.245	1
NFE2L2	Del_9q21.11	0.245	1
HLA-B	14q-Amp	0.246	1
TGFBR2	12p-Amp	0.246	1
TGFBR2	14q-Amp	0.246	1
TGFBR2	Del_14q32.32	0.246	1
Amp_3q26.33	Del_1q44	0.246	1
MLL2	Amp_20q11.22	0.247	1
4p-Del	Amp_Xq28	0.247	1
EP300	Del_18q23	0.248	1
HLA-A	Amp_20q11.22	0.248	1
20p-Amp	Xp-Del	0.248	1
11p-Del	Amp_9p13.3	0.248	1
5q-Del	Del_2q21.2	0.248	1
Amp_9p13.3	Amp_12q15	0.248	1
CUL3	MLL2	0.249	1
EPHA2	Del_14q11.2	0.249	1
MLL2	Del_10q23.31	0.249	1
NSD1	Del_10p11.21	0.249	1
MLL2	Del_21q22.3	0.25	1
RAC1	Del_1p13.2	0.25	1
HUWE1	Del_3p24.1	0.251	1
KIAA1267	Amp_20q11.22	0.251	1
CDKN2A	Amp_12p13.33	0.252	1
DYSF	Amp_13q22.1	0.252	1
EPHA2	4p-Del	0.252	1
FBXW7	Amp_2q11.2	0.252	1
FBXW7	Amp_13q34	0.252	1
Amp_13q22.1	Del_7q31.1	0.252	1
Amp_Xq28	Del_3p26.2	0.252	1
EP300	Amp_Xq28	0.253	1
FAT1	Amp_7p11.2	0.253	1
THSD7A	Del_9p21.3	0.253	1
7q-Amp	Amp_8q11.21	0.253	1
8p-Del	Del_16q23.1	0.253	1
Amp_8q11.21	Del_2q21.2	0.253	1
8q-Amp	Del_4p16.3	0.254	1
C3orf59	9p-Del	0.255	1
FGFR3	9p-Del	0.255	1
RHOA	9p-Del	0.255	1
CDKN2A	Amp_9p24.1	0.256	1
CDKN2A	Del_4q21.3	0.256	1
EPHA2	Amp_7p11.2	0.256	1
FAT1	THSD7A	0.256	1
FAT1	Del_16q23.1	0.256	1
KRT17	Del_9p21.3	0.257	1
PIK3CA	Amp_13q22.1	0.257	1
RAC1	Del_3p12.1	0.257	1
ZNF750	21q-Del	0.257	1
HUWE1	Del_5q15	0.258	1
NLRP8	Del_3p14.2	0.258	1
NLRP8	Del_8p23.2	0.258	1
11p-Del	Amp_11p13	0.258	1
EP300	RASA1	0.259	1
HLA-B	Amp_6p12.1	0.259	1
HLA-B	Del_2q22.1	0.259	1
KDM6A	Del_10q23.31	0.259	1
MLL4	Amp_Xq28	0.259	1
MLL4	Del_11q23.1	0.259	1
NFE2L2	Amp_18p11.31	0.259	1
RASA1	Del_11p15.5	0.259	1
11q-Del	Amp_7p11.2	0.259	1
Amp_7p11.2	Del_19p13.3	0.259	1
CASP8	SMAD4	0.26	1
SMAD4	Del_2q22.1	0.26	1
3q-Amp	Del_2q21.2	0.26	1
4q-Del	Amp_7p11.2	0.26	1
Amp_17q12	Del_2q22.1	0.26	1
BRAF	Del_9p21.3	0.261	1
EPHA2	12p-Amp	0.261	1
EPHA2	Del_14q32.32	0.261	1
JUB	NOTCH1	0.261	1
NOTCH1	Amp_Xq28	0.261	1
PIK3CA	Del_8p23.2	0.261	1
ASXL1	Amp_9p23	0.262	1
ASXL1	Del_16q23.3	0.262	1
CASP8	Del_10p15.3	0.262	1
CUL3	Amp_9p23	0.262	1
NFE2L2	Del_2q36.2	0.262	1
4q-Del	Amp_8q24.21	0.262	1
Amp_6p12.1	Del_1p13.2	0.262	1
CDKN2A	Del_18q23	0.263	1
DYSF	10p-Del	0.263	1
EP300	9p-Del	0.263	1
THSD7A	Amp_2q11.2	0.263	1
Del_1p36.21	Del_7q31.1	0.263	1
ADAM19	CDKN2A	0.264	1
CASP8	Amp_2q31.2	0.264	1
HLA-A	Del_18q23	0.264	1
HUWE1	3p-Del	0.264	1
KEAP1	Del_18q23	0.264	1
KIAA1267	Del_5q35.3	0.264	1
ZNF623	Del_5q35.3	0.264	1
FGFR3	Del_3p26.2	0.265	1
HLA-A	Del_14q11.2	0.265	1
9q-Amp	Del_14q11.2	0.265	1
C3orf59	5p-Amp	0.266	1
HRAS	Del_16q23.1	0.266	1
HUWE1	12p-Amp	0.266	1
HUWE1	14q-Amp	0.266	1
HUWE1	3q-Del	0.266	1
Del_14q32.32	Del_21q22.3	0.266	1
BRAF	Del_8p23.2	0.267	1
MAPK1	Del_3p14.2	0.267	1
NOTCH1	3q-Del	0.267	1
20p-Amp	Del_Xp22.2	0.267	1
15q-Del	Amp_12p13.33	0.267	1
Amp_9p24.1	Del_7q36.1	0.267	1
Amp_5p15.33	Amp_9p24.1	0.268	1
Amp_15q26.3	Amp_18p11.31	0.268	1
BRAF	Del_4q35.2	0.269	1
CREBBP	EP300	0.269	1
CREBBP	Del_10q23.31	0.269	1
DYSF	PIK3CA	0.269	1
EP300	13q-Del	0.269	1
FAT1	8q-Amp	0.269	1
HLA-B	Amp_12p13.33	0.269	1
KEAP1	Del_8p23.2	0.269	1
MAPK1	Del_13q14.2	0.269	1
PIK3CA	Amp_6q12	0.269	1
PIK3CA	Amp_13q34	0.269	1
ZNF750	8p-Amp	0.269	1
7p-Amp	Del_13q12.11	0.269	1
11q-Del	Amp_8q24.21	0.269	1
Amp_13q22.1	Del_11p15.5	0.269	1
MLL4	Amp_13q22.1	0.27	1
NOTCH1	Del_16q23.3	0.27	1
CUL3	20q-Amp	0.271	1
20q-Amp	Del_Xp21.3	0.271	1
JUB	Amp_8q11.21	0.272	1
MLL2	20p-Amp	0.272	1
MLL2	5q-Del	0.272	1
NSD1	8p-Amp	0.272	1
Amp_12q15	Del_9q21.11	0.272	1
CDKN2A	4p-Del	0.273	1
ZNF233	8q-Amp	0.273	1
EPHA2	Amp_6p12.1	0.274	1
BRAF	Del_5q12.1	0.275	1
BRAF	Del_5q15	0.275	1
ZNF623	Del_18q23	0.275	1
CREBBP	Amp_11q13.3	0.276	1
NLRP8	Del_4p16.3	0.276	1
NOTCH1	Del_4q22.1	0.276	1
7q-Amp	Del_13q14.2	0.276	1
HLA-A	12p-Amp	0.277	1
HLA-A	14q-Amp	0.277	1
HLA-A	Amp_5p12	0.277	1
KEAP1	12p-Amp	0.277	1
KEAP1	14q-Amp	0.277	1
KEAP1	Del_14q32.32	0.277	1
NLRP8	Del_3p12.1	0.277	1
Amp_9p24.1	Del_18q23	0.277	1
HLA-A	TP53	0.278	1
NFE2L2	Del_3p24.1	0.278	1
12p-Amp	Del_7q36.1	0.278	1
14q-Amp	Del_7q36.1	0.278	1
Del_14q32.32	Del_19p13.3	0.278	1
ASXL1	FAT1	0.279	1
HLA-B	Del_3p26.2	0.279	1
JUB	NLRP8	0.279	1
JUB	3q-Amp	0.279	1
JUB	9q-Del	0.279	1
NLRP8	Del_Xp22.2	0.279	1
NOTCH1	TP53	0.279	1
Del_2q21.2	Del_Xp22.2	0.279	1
ASXL1	EP300	0.28	1
CUL3	EP300	0.28	1
IRS4	Del_11p15.5	0.28	1
MAPK1	Del_3p12.1	0.28	1
NSD1	20q-Amp	0.28	1
NSD1	Amp_2q11.2	0.28	1
NSD1	Amp_6q12	0.28	1
NSD1	Amp_13q34	0.28	1
OR6C65	Del_10q23.31	0.28	1
TGFBR2	18q-Del	0.28	1
1q-Amp	Del_10q23.31	0.28	1
MLL4	9p-Del	0.281	1
NOTCH1	Amp_12p13.33	0.281	1
ZNF750	Del_14q11.2	0.281	1
HRAS	Del_8p23.2	0.282	1
PIK3CA	Del_4q35.2	0.282	1
Amp_11p13	Del_2q36.2	0.282	1
ZNF750	8q-Amp	0.283	1
Amp_Xq28	Del_2q22.1	0.283	1
Del_2q22.1	Del_Xp22.2	0.283	1
CDKN2A	3q-Amp	0.284	1
CREBBP	Del_3p26.2	0.284	1
NLRP8	Del_4p15.2	0.284	1
PIK3CA	Del_Xp21.3	0.284	1
VEZF1	Del_13q12.11	0.284	1
C3orf59	Amp_20q11.22	0.285	1
EP300	Del_Xp21.3	0.285	1
FAT1	ZNF750	0.285	1
HUWE1	NFE2L2	0.285	1
HUWE1	Amp_6p12.1	0.285	1
HUWE1	Del_16q23.3	0.285	1
KEAP1	Amp_7p11.2	0.285	1
MAPK1	Amp_3q26.33	0.285	1
RHOA	Amp_20q11.22	0.285	1
THSD7A	Del_11p15.5	0.285	1
8p-Del	Del_16q23.3	0.285	1
Amp_9p23	Del_21q22.3	0.285	1
DYSF	8p-Amp	0.287	1
EP300	3p-Del	0.287	1
HLA-B	11p-Del	0.287	1
HLA-B	Del_6p25.3	0.287	1
HRAS	Amp_2q11.2	0.287	1
HRAS	Amp_6q12	0.287	1
HRAS	Amp_13q34	0.287	1
HRAS	Del_7q31.1	0.287	1
NOTCH1	9p-Del	0.287	1
PIK3CA	Del_11p15.5	0.287	1
TGFBR2	11p-Del	0.287	1
TGFBR2	Amp_12q15	0.287	1
TGFBR2	Del_6p25.3	0.287	1
ZNF233	Amp_5p12	0.287	1
Amp_7p11.2	Del_14q11.2	0.287	1
5p-Amp	Del_1p13.2	0.288	1
5p-Amp	Del_10q23.31	0.288	1
DYSF	Amp_8p11.23	0.289	1
PIK3CA	3p-Del	0.289	1
Amp_7p11.2	Del_3p24.1	0.289	1
ASXL1	5q-Del	0.29	1
CREBBP	Xp-Del	0.29	1
CREBBP	Del_2q21.2	0.29	1
CUL3	20p-Amp	0.29	1
FBXW7	7q-Amp	0.29	1
FBXW7	9q-Del	0.29	1
JUB	Amp_18p11.31	0.29	1
MAPK1	Del_3p24.1	0.29	1
NLRP8	Del_3p24.1	0.29	1
NOTCH1	Amp_5p12	0.29	1
SMAD4	Amp_7q21.3	0.29	1
TGFBR2	Amp_5p15.33	0.29	1
7p-Amp	9q-Del	0.29	1
18q-Del	Amp_2q31.2	0.29	1
Amp_8q11.21	Del_19p13.3	0.29	1
Del_8p23.2	Del_16q23.1	0.29	1
KDM6A	Amp_8q11.21	0.291	1
RASA1	3q-Amp	0.291	1
RB1	Amp_8q11.21	0.291	1
8q-Amp	Del_2q36.2	0.291	1
9q-Amp	Amp_11q13.3	0.291	1
Amp_9p13.3	Del_3p24.1	0.291	1
BRAF	9p-Del	0.292	1
CASP8	ZNF623	0.292	1
EPHA2	Amp_12p13.33	0.292	1
HRAS	Del_16q23.3	0.292	1
IRS4	Del_18q23	0.292	1
MAPK1	9p-Del	0.292	1
NAP1L2	Amp_7p11.2	0.292	1
OR6C65	Del_18q23	0.292	1
RAC1	Amp_9p24.1	0.292	1
TIGD4	Amp_7p11.2	0.292	1
ZNF233	Amp_7p11.2	0.292	1
3q-Del	Amp_9p24.1	0.292	1
CDKN2A	Amp_8p11.23	0.293	1
HUWE1	Del_Xq21.33	0.293	1
KRTAP5-5	Del_3p14.2	0.293	1
KRTAP5-5	Del_8p23.2	0.293	1
MLL4	Del_3p26.2	0.293	1
CDKN2A	Amp_11q13.3	0.294	1
ZNF750	14q-Amp	0.294	1
ZNF750	Del_14q32.32	0.294	1
8p-Del	Amp_9p13.3	0.294	1
OR6C65	TP53	0.296	1
PTPN14	TP53	0.296	1
Amp_7q21.3	Amp_8q11.21	0.296	1
MLL2	Del_14q11.2	0.297	1
11q-Del	Amp_6p12.1	0.297	1
Amp_6p12.1	Del_19p13.3	0.297	1
ADAM19	Amp_11q13.3	0.298	1
C3orf59	Del_5q35.3	0.298	1
HUWE1	9p-Del	0.298	1
RHOA	Del_5q35.3	0.298	1
Amp_9p24.1	Del_16q23.1	0.298	1
ADAM19	Amp_12p13.33	0.299	1
KIAA1267	Amp_9p13.3	0.299	1
KIAA1267	Amp_12p13.33	0.299	1
ZNF623	Amp_9p13.3	0.299	1
ZNF623	Amp_12p13.33	0.299	1
JUB	RASA1	0.3	1
VEZF1	3q-Amp	0.3	1
1q-Amp	Del_13q12.11	0.3	1
3q-Amp	Del_6p25.3	0.3	1
3q-Amp	Del_9q21.11	0.3	1
Amp_9p23	Del_7q36.1	0.3	1
NLRP8	10p-Del	0.301	1
NLRP8	Del_Xp21.3	0.301	1
THSD7A	Amp_15q26.3	0.301	1
7q-Amp	Del_4q21.3	0.301	1
11q-Del	Del_Xq21.33	0.301	1
Xp-Del	Del_1p36.21	0.301	1
Del_2q21.2	Del_Xp21.3	0.301	1
Del_7q36.1	Del_Xq21.33	0.301	1
KRT17	3p-Del	0.302	1
TGFBR2	Amp_7q21.3	0.302	1
TGFBR2	Del_17q25.3	0.302	1
3q-Amp	7p-Amp	0.302	1
ADAM19	Amp_8q24.21	0.303	1
CASP8	7p-Amp	0.303	1
CASP8	Amp_13q22.1	0.303	1
EPHA2	11p-Del	0.303	1
EPHA2	18q-Del	0.303	1
EPHA2	Del_6p25.3	0.303	1
EPHA2	Del_9q21.11	0.303	1
KRTAP5-5	Del_3p12.1	0.303	1
7p-Amp	Del_2q22.1	0.303	1
Amp_12q15	Del_2q36.2	0.303	1
Amp_2q31.2	Del_11q23.1	0.304	1
BRAF	5p-Amp	0.305	1
C3orf59	4p-Del	0.305	1
FGFR3	4p-Del	0.305	1
HLA-A	Amp_11p13	0.305	1
HUWE1	Amp_11p13	0.305	1
KEAP1	Amp_11p13	0.305	1
RHOA	4p-Del	0.305	1
Amp_7p11.2	Amp_9p24.1	0.305	1
Amp_9p24.1	Del_4p16.3	0.305	1
HRAS	20q-Amp	0.306	1
NOTCH1	Del_5q35.3	0.306	1
RB1	Del_9p21.3	0.306	1
ZNF623	18q-Del	0.306	1
9q-Amp	Del_2q22.1	0.306	1
RAC1	Amp_5p12	0.307	1
ADAM19	Amp_8q11.21	0.308	1
CDKN2A	HUWE1	0.308	1
CDKN2A	Del_21q22.3	0.308	1
FAT1	8p-Del	0.308	1
FAT1	Del_21q22.3	0.308	1
ZNF750	Amp_6p12.1	0.308	1
KRTAP5-5	Del_3p24.1	0.309	1
RAC1	Del_3p26.2	0.309	1
20q-Amp	Del_9p21.3	0.309	1
5p-Amp	5q-Del	0.309	1
EP300	Amp_8q11.21	0.31	1
PIK3CA	Del_6p25.3	0.31	1
PIK3CA	Del_9q21.11	0.31	1
RAC1	Amp_9p23	0.31	1
18q-Del	Amp_Xq28	0.31	1
3q-Del	Amp_9p23	0.31	1
Amp_18p11.31	Del_6p25.3	0.31	1
CREBBP	RASA1	0.311	1
IRS4	Amp_2q31.2	0.311	1
KDM6A	Amp_13q22.1	0.311	1
PTPN14	Amp_2q31.2	0.311	1
RASA1	Amp_13q22.1	0.311	1
RB1	Amp_13q22.1	0.311	1
ZNF750	Del_8p23.2	0.311	1
Amp_9p23	Del_14q11.2	0.311	1
CDKN2A	Del_16q23.3	0.312	1
MEFV	Del_4q35.2	0.312	1
Amp_2q11.2	Del_14q32.32	0.312	1
Amp_9p13.3	Del_7q36.1	0.312	1
Amp_13q34	Del_14q32.32	0.312	1
Del_9p21.3	Del_14q32.32	0.312	1
FAT1	9p-Del	0.313	1
PIK3CA	21q-Del	0.313	1
PIK3CA	5q-Del	0.313	1
13q-Del	Amp_2q31.2	0.313	1
ADAM19	Del_10p11.21	0.314	1
EP300	Amp_8p11.23	0.314	1
EPHA2	Del_10p11.21	0.314	1
PTEN	Amp_7p11.2	0.314	1
ZNF623	Del_10p11.21	0.314	1
7p-Amp	Amp_18p11.31	0.314	1
8q-Amp	Del_4q22.1	0.314	1
15q-Del	Del_10p15.3	0.314	1
Amp_17q12	Del_10p15.3	0.314	1
NOTCH1	10p-Del	0.315	1
NOTCH1	Del_4q21.3	0.315	1
CDKN2A	FGFR3	0.316	1
FAT1	RHOA	0.316	1
HLA-A	Amp_12p13.33	0.316	1
KEAP1	Amp_9p13.3	0.316	1
KEAP1	Amp_12p13.33	0.316	1
CREBBP	Amp_9p13.3	0.317	1
CREBBP	Amp_12p13.33	0.317	1
FBXW7	Amp_9p13.3	0.317	1
MEFV	Del_5q12.1	0.317	1
NUDT11	Amp_8p11.23	0.317	1
ZNF750	Amp_7p11.2	0.317	1
8q-Amp	Del_7q31.1	0.317	1
13q-Del	Amp_9p13.3	0.317	1
11q-Del	Amp_11p13	0.318	1
HLA-A	11p-Del	0.319	1
HLA-A	Amp_12q15	0.319	1
HLA-A	Del_6p25.3	0.319	1
HLA-A	Del_9q21.11	0.319	1
KEAP1	11p-Del	0.319	1
KEAP1	Del_6p25.3	0.319	1
KEAP1	Del_9q21.11	0.319	1
NSD1	12p-Amp	0.319	1
NSD1	Del_14q32.32	0.319	1
9q-Amp	Del_9q21.11	0.319	1
Amp_9p24.1	Del_5q15	0.319	1
CDKN2A	4q-Del	0.32	1
EP300	8p-Amp	0.32	1
EP300	4q-Del	0.32	1
8p-Amp	Del_11p15.5	0.32	1
ZNF233	Amp_8q24.21	0.321	1
ASXL1	Amp_Xq28	0.322	1
CASP8	Del_2q22.1	0.322	1
HUWE1	15q-Del	0.322	1
HUWE1	Amp_17q12	0.322	1
IRS4	JUB	0.322	1
JUB	OR6C65	0.322	1
PTPN14	Amp_Xq28	0.322	1
CDKN2A	Amp_12q15	0.323	1
FAT1	11p-Del	0.323	1
FAT1	Del_9q21.11	0.323	1
NFE2L2	Del_16q23.1	0.323	1
RASA1	THSD7A	0.323	1
ASXL1	3q-Amp	0.324	1
CUL3	3q-Amp	0.324	1
MAPK1	Del_3p26.2	0.324	1
NUDT11	Amp_20q11.22	0.324	1
PTPN14	3q-Amp	0.324	1
CASP8	10p-Del	0.325	1
CASP8	Del_4q21.3	0.325	1
CDKN2A	Amp_13q34	0.325	1
EPHA2	Amp_3q26.33	0.325	1
FAT1	Amp_13q34	0.325	1
MLL2	12p-Amp	0.325	1
MLL2	Del_14q32.32	0.325	1
TGFBR2	Del_2q36.2	0.325	1
CREBBP	Del_4q35.2	0.326	1
DYSF	NFE2L2	0.326	1
HRAS	9q-Del	0.326	1
HRAS	Xp-Del	0.326	1
HRAS	Amp_15q26.3	0.326	1
HRAS	Del_2q21.2	0.326	1
NFE2L2	Amp_6q12	0.326	1
NFE2L2	Amp_13q34	0.326	1
NFE2L2	Del_7q31.1	0.326	1
NSD1	Amp_7p11.2	0.326	1
RHOA	Del_2q22.1	0.326	1
8p-Amp	9q-Del	0.326	1
8p-Amp	Amp_15q26.3	0.326	1
8p-Amp	Del_2q21.2	0.326	1
CASP8	Amp_8q11.21	0.327	1
DYSF	4p-Del	0.327	1
EPHA2	TP53	0.327	1
HUWE1	11p-Del	0.327	1
HUWE1	Del_6p25.3	0.327	1
Amp_7q21.3	Del_4q35.2	0.327	1
PIK3CA	Amp_8p11.23	0.328	1
TGFBR2	3q-Amp	0.328	1
FBXW7	Del_Xp22.2	0.329	1
JUB	7p-Amp	0.329	1
NOTCH1	5p-Amp	0.329	1
THSD7A	Amp_2q31.2	0.33	1
18q-Del	Amp_13q22.1	0.33	1
CASP8	ZNF750	0.331	1
MLL4	12p-Amp	0.331	1
MLL4	Del_14q32.32	0.331	1
SMAD4	Del_7q36.1	0.331	1
Amp_5p12	Del_1p13.2	0.331	1
Amp_11q13.3	Amp_20q11.22	0.331	1
ASXL1	Amp_18p11.31	0.332	1
HUWE1	Del_18q23	0.332	1
IRS4	Amp_18p11.31	0.332	1
NFE2L2	5p-Amp	0.332	1
Amp_9p24.1	Del_16q23.3	0.332	1
ASXL1	Amp_13q22.1	0.333	1
CREBBP	1q-Amp	0.333	1
FBXW7	PTPN14	0.333	1
KIAA1267	Del_9p21.3	0.333	1
MEFV	Del_3p14.2	0.333	1
NAP1L2	Del_13q12.11	0.333	1
OR6C65	Amp_13q22.1	0.333	1
PIK3R1	Del_3p14.2	0.333	1
PIK3R1	Del_8p23.2	0.333	1
PTPN14	7p-Amp	0.333	1
PTPN14	Amp_13q22.1	0.333	1
THSD7A	Amp_8q11.21	0.333	1
1q-Amp	Amp_13q22.1	0.333	1
Amp_8q11.21	Del_1p36.21	0.333	1
Amp_Xq28	Del_3p24.1	0.333	1
C3orf59	Amp_9p13.3	0.334	1
CASP8	Amp_9p24.1	0.334	1
DYSF	Amp_3q26.33	0.334	1
RHOA	Amp_9p13.3	0.334	1
RHOA	Amp_12p13.33	0.334	1
HLA-A	Del_17q25.3	0.335	1
HLA-B	9q-Amp	0.335	1
KEAP1	TGFBR2	0.335	1
MEFV	9p-Del	0.335	1
VEZF1	9p-Del	0.335	1
8p-Amp	5q-Del	0.335	1
9q-Amp	Del_17q25.3	0.335	1
MLL2	TP53	0.336	1
BRAF	Del_5q35.3	0.337	1
HLA-B	Del_4q22.1	0.337	1
NSD1	Del_2q21.2	0.337	1
PTEN	Amp_11q13.3	0.337	1
TGFBR2	Del_4q22.1	0.337	1
ZNF750	11p-Del	0.337	1
ZNF750	Amp_12q15	0.337	1
ZNF750	Del_6p25.3	0.337	1
ZNF750	Del_9q21.11	0.337	1
Amp_7p11.2	Del_4p15.2	0.337	1
Amp_7q21.3	Amp_Xq28	0.337	1
CREBBP	Del_4p15.2	0.338	1
KIAA1267	Del_1p13.2	0.338	1
NFE2L2	Del_3p26.2	0.338	1
NLRP8	Del_3p26.2	0.338	1
NOTCH1	Amp_12q15	0.338	1
NOTCH1	Del_9q21.11	0.338	1
ZNF623	Del_1p13.2	0.338	1
ZNF623	Del_2q36.2	0.338	1
Amp_8q24.21	Del_1q44	0.338	1
Amp_11q13.3	Del_14q32.32	0.338	1
CASP8	Amp_9p13.3	0.339	1
EP300	Del_14q11.2	0.339	1
HLA-A	Del_10p11.21	0.339	1
TGFBR2	Amp_18p11.31	0.339	1
10p-Del	Amp_18p11.31	0.339	1
Amp_12p13.33	Del_2q22.1	0.339	1
DYSF	Amp_11p13	0.34	1
RAC1	Amp_18q11.2	0.34	1
ZNF750	Amp_11q13.3	0.34	1
Amp_11p13	Del_7q31.1	0.34	1
ASXL1	Del_4p16.3	0.341	1
C3orf59	18q-Del	0.341	1
FGFR3	18q-Del	0.341	1
HUWE1	Del_13q12.11	0.341	1
IRS4	Del_13q14.2	0.341	1
RHOA	18q-Del	0.341	1
ZNF750	Amp_12p13.33	0.342	1
ADAM19	Amp_5p15.33	0.343	1
FAT1	3p-Del	0.343	1
KIAA1267	Amp_5p15.33	0.343	1
KIAA1267	Del_11q23.1	0.343	1
PIK3CA	4q-Del	0.343	1
PTEN	Amp_8q24.21	0.343	1
ZNF623	Amp_5p15.33	0.343	1
Amp_5p12	Del_2q22.1	0.343	1
CDKN2A	Amp_3q26.33	0.344	1
FAT1	Amp_3q26.33	0.344	1
HLA-B	PIK3CA	0.344	1
HLA-B	3p-Del	0.344	1
Amp_9p24.1	Del_3p24.1	0.344	1
Amp_13q22.1	Del_10p11.21	0.344	1
ASXL1	10p-Del	0.345	1
ASXL1	Del_1p36.21	0.345	1
IRS4	Del_1p36.21	0.345	1
MLL4	Amp_6p12.1	0.345	1
OR6C65	10p-Del	0.345	1
PTPN14	Del_1p36.21	0.345	1
PTPN14	Del_4q21.3	0.345	1
THSD7A	1q-Amp	0.345	1
ADAM19	Del_4q22.1	0.346	1
ADAM19	Del_10p15.3	0.346	1
CREBBP	FBXW7	0.346	1
ZNF623	Del_4q22.1	0.346	1
ZNF623	Del_10p15.3	0.346	1
HRAS	KDM6A	0.347	1
HRAS	RASA1	0.347	1
JUB	10p-Del	0.347	1
MEFV	Del_3p12.1	0.347	1
PIK3R1	Del_3p12.1	0.347	1
Amp_20q11.22	Del_18q23	0.347	1
MEFV	5p-Amp	0.348	1
NOTCH1	5q-Del	0.348	1
PIK3R1	5p-Amp	0.348	1
SMAD4	Del_8p23.2	0.348	1
THSD7A	8q-Amp	0.348	1
8q-Amp	10p-Del	0.348	1
8q-Amp	Del_4q21.3	0.348	1
ASXL1	Del_4p15.2	0.349	1
C3orf59	Del_10p11.21	0.349	1
FAT1	Del_Xp22.2	0.349	1
HLA-B	Del_4p16.3	0.349	1
HLA-B	Del_4q35.2	0.349	1
JUB	MLL2	0.349	1
MLL2	Del_Xp22.2	0.349	1
OR6C65	Del_5q12.1	0.349	1
PTPN14	Del_5q12.1	0.349	1
PTPN14	Del_5q15	0.349	1
RHOA	Del_10p11.21	0.349	1
SMAD4	Del_16q23.1	0.349	1
TGFBR2	Del_13q14.2	0.349	1
TP53	Amp_9p23	0.349	1
20q-Amp	Del_11q23.1	0.349	1
15q-Del	Amp_9p24.1	0.349	1
Amp_9p24.1	Amp_17q12	0.349	1
CREBBP	Del_3p12.1	0.35	1
HLA-A	Amp_7q21.3	0.35	1
HLA-B	Del_21q22.3	0.35	1
KEAP1	Amp_7q21.3	0.35	1
NFE2L2	Del_16q23.3	0.35	1
TGFBR2	8p-Del	0.35	1
TIGD4	3q-Amp	0.35	1
ZNF233	3q-Amp	0.35	1
20q-Amp	4p-Del	0.35	1
20q-Amp	Amp_9p24.1	0.35	1
EPHA2	KEAP1	0.351	1
NOTCH1	Del_5q12.1	0.351	1
NLRP8	Del_14q32.32	0.352	1
NOTCH1	Amp_17q12	0.352	1
12p-Amp	Del_2q21.2	0.352	1
7q-Amp	Del_14q32.32	0.352	1
Amp_9p13.3	Del_3p14.2	0.352	1
HUWE1	ZNF623	0.354	1
KIAA1267	Del_21q22.3	0.354	1
MEFV	NSD1	0.354	1
MLL2	Del_5q12.1	0.354	1
ZNF623	8p-Del	0.354	1
ZNF623	Del_21q22.3	0.354	1
DYSF	Amp_12q15	0.355	1
MLL2	Amp_6p12.1	0.355	1
ZNF233	Amp_18p11.31	0.355	1
9p-Del	Amp_20q11.22	0.355	1
Amp_12q15	Amp_13q34	0.355	1
Amp_12q15	Del_7q31.1	0.355	1
CDKN2A	Del_4p15.2	0.356	1
FAT1	Del_5q12.1	0.356	1
NFE2L2	Amp_8p11.23	0.356	1
9q-Del	Amp_20q11.22	0.356	1
Xp-Del	Amp_20q11.22	0.356	1
C3orf59	Amp_7q21.3	0.357	1
MEFV	Del_3p24.1	0.357	1
OR6C65	21q-Del	0.357	1
PIK3R1	Del_3p24.1	0.357	1
RHOA	Amp_7q21.3	0.357	1
8q-Amp	Del_10q23.31	0.357	1
Del_10q23.31	Del_Xq21.33	0.357	1
Del_11p15.5	Del_Xq21.33	0.357	1
Amp_12q15	Del_3p24.1	0.358	1
CASP8	Amp_13q34	0.359	1
KEAP1	Del_13q12.11	0.359	1
MLL4	Amp_11p13	0.359	1
14q-Amp	Del_11p15.5	0.359	1
3q-Amp	Del_9p21.3	0.359	1
Amp_6q12	Del_2q22.1	0.359	1
HLA-B	Del_4p15.2	0.36	1
EPHA2	Del_4q22.1	0.361	1
FGFR3	Amp_8q11.21	0.361	1
NAP1L2	Del_4q35.2	0.361	1
NAP1L2	Del_13q14.2	0.361	1
PIK3R1	Amp_8p11.23	0.361	1
PTEN	Amp_2q31.2	0.361	1
RAC1	Amp_2q31.2	0.361	1
3q-Del	Amp_2q31.2	0.361	1
CDKN2A	Del_17q25.3	0.362	1
HLA-B	Del_19p13.3	0.362	1
ADAM19	11q-Del	0.363	1
ADAM19	Del_7q36.1	0.363	1
CREBBP	Del_Xp21.3	0.363	1
FBXW7	THSD7A	0.363	1
KIAA1267	11q-Del	0.363	1
KIAA1267	Del_7q36.1	0.363	1
KIAA1267	Del_19p13.3	0.363	1
THSD7A	7p-Amp	0.363	1
ZNF623	11q-Del	0.363	1
ZNF623	Del_7q36.1	0.363	1
ZNF623	Del_19p13.3	0.363	1
7p-Amp	Del_4q21.3	0.363	1
10p-Del	Amp_13q22.1	0.363	1
ADAM19	Amp_3q26.33	0.364	1
NSD1	11q-Del	0.364	1
ZNF623	Amp_3q26.33	0.364	1
8q-Amp	Del_19p13.3	0.364	1
21q-Del	Amp_Xq28	0.364	1
9p-Del	Amp_12q15	0.364	1
FBXW7	Amp_7p11.2	0.365	1
NFE2L2	Del_2q21.2	0.365	1
7p-Amp	Del_11q23.1	0.365	1
13q-Del	Amp_5p15.33	0.365	1
MAPK1	Del_2q22.1	0.366	1
NLRP8	NOTCH1	0.366	1
NUDT11	Del_2q22.1	0.366	1
11p-Del	Amp_9p24.1	0.366	1
18q-Del	Del_16q23.1	0.366	1
Amp_6p12.1	Del_9p21.3	0.366	1
Amp_9p23	Del_16q23.3	0.366	1
HLA-A	9q-Amp	0.367	1
NAP1L2	Del_5q15	0.367	1
VEZF1	Amp_20q11.22	0.367	1
8p-Amp	Amp_2q31.2	0.367	1
15q-Del	Amp_9p23	0.367	1
5q-Del	Del_Xq21.33	0.367	1
Amp_9p23	Amp_17q12	0.367	1
EP300	Amp_9p24.1	0.368	1
EP300	Del_16q23.1	0.368	1
FGFR3	Amp_11q13.3	0.368	1
EPHA2	Amp_18p11.31	0.369	1
NSD1	RASA1	0.369	1
ASXL1	HRAS	0.37	1
ASXL1	8p-Amp	0.37	1
CASP8	8p-Amp	0.37	1
CUL3	HRAS	0.37	1
CUL3	8p-Amp	0.37	1
HLA-B	Amp_6q12	0.37	1
HLA-B	Amp_13q34	0.37	1
HRAS	IRS4	0.37	1
HRAS	OR6C65	0.37	1
HRAS	1q-Amp	0.37	1
IRS4	8p-Amp	0.37	1
OR6C65	4q-Del	0.37	1
TGFBR2	Amp_2q11.2	0.37	1
TGFBR2	Amp_13q34	0.37	1
8p-Amp	Del_2q22.1	0.37	1
Amp_9p13.3	Del_7q31.1	0.37	1
Amp_12p13.33	Del_7q31.1	0.37	1
CREBBP	Del_3p24.1	0.371	1
NOTCH1	Amp_11q13.3	0.371	1
HLA-B	Amp_8q24.21	0.372	1
JUB	RAC1	0.372	1
NOTCH1	Del_17q25.3	0.372	1
RAC1	Amp_Xq28	0.372	1
RAC1	Del_Xp22.2	0.372	1
SMAD4	8q-Amp	0.372	1
BRAF	Amp_9p13.3	0.373	1
C3orf59	Del_1p13.2	0.373	1
FGFR3	Del_1p13.2	0.373	1
FGFR3	Del_2q36.2	0.373	1
MAPK1	Amp_12p13.33	0.373	1
NUDT11	Amp_9p13.3	0.373	1
RASA1	12p-Amp	0.373	1
RHOA	Del_2q36.2	0.373	1
EPHA2	8p-Del	0.374	1
HLA-A	Del_2q36.2	0.374	1
MLL4	Del_6p25.3	0.374	1
MLL4	Del_9q21.11	0.374	1
14q-Amp	20p-Amp	0.374	1
CASP8	Amp_9p23	0.375	1
CASP8	Del_16q23.3	0.375	1
RAC1	Del_13q12.11	0.375	1
NOTCH1	4q-Del	0.376	1
Del_2q21.2	Del_5q35.3	0.376	1
CDKN2A	NUDT11	0.377	1
FAT1	NUDT11	0.377	1
MLL2	13q-Del	0.377	1
NOTCH1	Amp_9p24.1	0.377	1
20q-Amp	Amp_17q12	0.377	1
ASXL1	Amp_5p15.33	0.378	1
CUL3	Amp_5p15.33	0.378	1
CUL3	Del_11q23.1	0.378	1
HUWE1	Amp_2q31.2	0.378	1
PTPN14	Amp_5p15.33	0.378	1
5p-Amp	Del_Xp22.2	0.378	1
8q-Amp	21q-Del	0.378	1
EP300	Amp_6p12.1	0.379	1
EPHA2	Del_13q14.2	0.379	1
NFE2L2	Del_10q23.31	0.379	1
NSD1	Amp_12p13.33	0.379	1
Amp_5p15.33	Del_10q23.31	0.379	1
Amp_6p12.1	Del_10q23.31	0.379	1
Amp_9p13.3	Del_3p26.2	0.379	1
FAT1	Amp_9p13.3	0.38	1
FAT1	Amp_12p13.33	0.38	1
8p-Del	Amp_5p12	0.38	1
Xp-Del	Amp_11p13	0.38	1
Amp_7q21.3	Del_4q21.3	0.38	1
Amp_7q21.3	Del_Xp21.3	0.38	1
Amp_11p13	Amp_15q26.3	0.38	1
BRAF	18q-Del	0.381	1
CDKN2A	MLL2	0.381	1
KIAA1267	Amp_9p24.1	0.381	1
MAPK1	18q-Del	0.381	1
RHOA	Del_4q22.1	0.381	1
RHOA	Del_10p15.3	0.381	1
ZNF623	Amp_9p24.1	0.381	1
Del_1p36.21	Del_Xp21.3	0.381	1
KDM6A	PIK3CA	0.382	1
PIK3CA	ZNF623	0.382	1
ZNF623	3p-Del	0.382	1
Amp_8q24.21	Del_4p16.3	0.382	1
Amp_8q24.21	Del_13q14.2	0.382	1
CREBBP	3q-Del	0.383	1
FBXW7	PTEN	0.383	1
FBXW7	RAC1	0.383	1
PTEN	7p-Amp	0.383	1
RAC1	7p-Amp	0.383	1
RAC1	Amp_13q22.1	0.383	1
Amp_5p12	Del_1p36.21	0.383	1
Amp_5p12	Del_Xp21.3	0.383	1
Amp_8p11.23	Amp_11p13	0.383	1
Amp_11q13.3	Del_19p13.3	0.383	1
EP300	Amp_18p11.31	0.385	1
HUWE1	3q-Amp	0.385	1
TIGD4	9p-Del	0.385	1
ZNF233	9p-Del	0.385	1
20q-Amp	Amp_9p23	0.385	1
Amp_6p12.1	Amp_11q13.3	0.385	1
DYSF	EPHA2	0.386	1
EPHA2	Amp_2q11.2	0.386	1
EPHA2	Amp_6q12	0.386	1
EPHA2	Del_7q31.1	0.386	1
KEAP1	Del_4q22.1	0.386	1
MLL2	Amp_11p13	0.387	1
NFE2L2	RB1	0.387	1
PIK3CA	Amp_8q11.21	0.387	1
SMAD4	Del_11p15.5	0.387	1
20p-Amp	Amp_9p24.1	0.387	1
5p-Amp	11p-Del	0.387	1
Amp_9p24.1	Amp_18q11.2	0.387	1
BRAF	Del_10p11.21	0.388	1
MAPK1	Del_10p11.21	0.388	1
MAPK1	Del_18q23	0.388	1
MLL4	Amp_7p11.2	0.388	1
Amp_13q22.1	Del_1p13.2	0.388	1
HLA-B	Del_16q23.1	0.389	1
Amp_9p24.1	Del_17q25.3	0.389	1
C3orf59	8p-Del	0.39	1
C3orf59	Del_21q22.3	0.39	1
EPHA2	Del_5q12.1	0.39	1
EPHA2	Del_5q15	0.39	1
FBXW7	Amp_3q26.33	0.39	1
FGFR3	8p-Del	0.39	1
FGFR3	Del_21q22.3	0.39	1
RHOA	8p-Del	0.39	1
RHOA	Del_21q22.3	0.39	1
FAT1	NSD1	0.391	1
8q-Amp	Del_9p21.3	0.391	1
Amp_8q11.21	Del_7q31.1	0.391	1
MEFV	Del_3p26.2	0.392	1
PIK3R1	Del_3p26.2	0.392	1
8q-Amp	9q-Del	0.392	1
8q-Amp	Del_2q21.2	0.392	1
TGFBR2	9p-Del	0.393	1
ZNF750	Del_13q12.11	0.393	1
CDKN2A	12p-Amp	0.394	1
FAT1	12p-Amp	0.394	1
SMAD4	Amp_5p12	0.394	1
Amp_2q31.2	Del_19p13.3	0.394	1
NFE2L2	20p-Amp	0.395	1
NLRP8	Amp_12q15	0.395	1
NLRP8	Del_6p25.3	0.395	1
RAC1	Del_Xp21.3	0.395	1
THSD7A	Amp_7p11.2	0.395	1
10p-Del	Amp_7p11.2	0.395	1
Xp-Del	Del_6p25.3	0.395	1
Amp_7p11.2	Del_1p36.21	0.395	1
Amp_7q21.3	Del_2q22.1	0.395	1
Amp_8q24.21	Del_19p13.3	0.395	1
Amp_12q15	Amp_15q26.3	0.395	1
Amp_12q15	Del_2q21.2	0.395	1
ASXL1	14q-Amp	0.396	1
ASXL1	Del_14q32.32	0.396	1
CUL3	Del_14q32.32	0.396	1
IRS4	14q-Amp	0.396	1
OR6C65	14q-Amp	0.396	1
PTPN14	12p-Amp	0.396	1
PTPN14	14q-Amp	0.396	1
Amp_2q31.2	Amp_20q11.22	0.396	1
Amp_5p12	Del_10q23.31	0.396	1
NAP1L2	5p-Amp	0.397	1
ZNF233	5p-Amp	0.397	1
20p-Amp	Amp_17q12	0.397	1
11p-Del	Amp_8q11.21	0.397	1
Amp_8q11.21	Del_9q21.11	0.397	1
Amp_11q13.3	Del_1p13.2	0.397	1
C3orf59	Del_7q36.1	0.398	1
FGFR3	Del_19p13.3	0.398	1
HUWE1	Amp_Xq28	0.398	1
JUB	8p-Del	0.398	1
RHOA	11q-Del	0.398	1
RHOA	Amp_5p15.33	0.398	1
RHOA	Del_7q36.1	0.398	1
FAT1	3q-Amp	0.399	1
HLA-A	8p-Del	0.399	1
HLA-A	Del_21q22.3	0.399	1
KEAP1	Del_21q22.3	0.399	1
NSD1	Del_6p25.3	0.399	1
THSD7A	21q-Del	0.399	1
9q-Amp	8p-Del	0.399	1
FAT1	4p-Del	0.4	1
FBXW7	8p-Amp	0.4	1
GAGE2A	Amp_8q11.21	0.4	1
KIAA1267	Amp_9p23	0.4	1
ZNF623	Amp_9p23	0.4	1
8p-Amp	Amp_13q22.1	0.4	1
Del_Xp22.2	Del_Xq21.33	0.4	1
EP300	Amp_11p13	0.401	1
HLA-A	Amp_18p11.31	0.401	1
HUWE1	Amp_18p11.31	0.401	1
KDM6A	Amp_11p13	0.401	1
KEAP1	Amp_18p11.31	0.401	1
RASA1	Amp_11p13	0.401	1
Amp_11p13	Del_10q23.31	0.401	1
DYSF	Amp_8q24.21	0.402	1
3p-Del	Amp_Xq28	0.402	1
EP300	Amp_9p23	0.403	1
HLA-A	Amp_6q12	0.403	1
KEAP1	Amp_2q11.2	0.403	1
KEAP1	Amp_13q34	0.403	1
KEAP1	Del_7q31.1	0.403	1
9q-Amp	Amp_6q12	0.403	1
9q-Amp	Amp_13q34	0.403	1
9q-Amp	Del_7q31.1	0.403	1
Amp_9p23	Del_10q23.31	0.403	1
CDKN2A	EPHA2	0.404	1
CREBBP	Del_4q22.1	0.404	1
DYSF	Amp_7q21.3	0.404	1
FBXW7	Del_10p15.3	0.404	1
NAP1L2	NSD1	0.404	1
NOTCH1	Del_2q36.2	0.404	1
NSD1	OR6C65	0.404	1
NSD1	ZNF233	0.404	1
NSD1	1q-Amp	0.404	1
5p-Amp	7p-Amp	0.404	1
5p-Amp	13q-Del	0.404	1
TP53	Del_11p15.5	0.405	1
7p-Amp	Del_18q23	0.406	1
HUWE1	Del_5q35.3	0.407	1
MLL2	Del_4q21.3	0.407	1
NOTCH1	RB1	0.407	1
14q-Amp	Del_3p24.1	0.407	1
KRT17	Amp_11q13.3	0.408	1
Amp_9p13.3	Del_14q11.2	0.408	1
ADAM19	20q-Amp	0.409	1
ASXL1	Amp_6p12.1	0.409	1
CASP8	VEZF1	0.409	1
EMG1	Del_3p12.1	0.409	1
MLL2	SMAD4	0.409	1
MLL2	8p-Del	0.409	1
NFE2L2	PTPN14	0.409	1
OR6C65	Amp_6p12.1	0.409	1
PIK3R1	Del_2q22.1	0.409	1
HLA-B	NLRP8	0.41	1
HLA-B	7q-Amp	0.41	1
HLA-B	Xp-Del	0.41	1
MLL2	Amp_8q11.21	0.41	1
MLL4	18q-Del	0.41	1
NAP1L2	Amp_8p11.23	0.41	1
TGFBR2	7q-Amp	0.41	1
TGFBR2	Xp-Del	0.41	1
THSD7A	Del_1p13.2	0.41	1
ZNF233	Amp_8p11.23	0.41	1
14q-Amp	3p-Del	0.41	1
8q-Amp	Del_18q23	0.41	1
Amp_7p11.2	Del_6p25.3	0.41	1
Amp_7p11.2	Del_9q21.11	0.41	1
Del_2q21.2	Del_17q25.3	0.41	1
Del_2q36.2	Del_Xp21.3	0.41	1
FBXW7	Del_Xq21.33	0.411	1
KEAP1	Del_13q14.2	0.411	1
ZNF233	Del_8p23.2	0.411	1
20p-Amp	Amp_18p11.31	0.411	1
20p-Amp	Del_11q23.1	0.411	1
7p-Amp	Del_Xq21.33	0.411	1
9q-Amp	Del_13q14.2	0.411	1
13q-Del	Del_Xq21.33	0.411	1
Amp_8p11.23	Del_6p25.3	0.411	1
BRAF	Del_1p13.2	0.412	1
BRAF	Del_2q36.2	0.412	1
HLA-A	11q-Del	0.412	1
HLA-A	Del_19p13.3	0.412	1
HRAS	Del_10p11.21	0.412	1
KEAP1	11q-Del	0.412	1
KRT17	Amp_18p11.31	0.412	1
MAPK1	Del_1p13.2	0.412	1
EPHA2	Amp_9p24.1	0.413	1
IRS4	Amp_8p11.23	0.413	1
ZNF623	Del_8p23.2	0.413	1
IRS4	Amp_3q26.33	0.414	1
OR6C65	Amp_3q26.33	0.414	1
PTPN14	Amp_3q26.33	0.414	1
12p-Amp	Del_18q23	0.414	1
Amp_7q21.3	Amp_9p13.3	0.414	1
Amp_9p13.3	Amp_18p11.31	0.414	1
Del_19p13.3	Del_Xp22.2	0.414	1
FAT1	9q-Del	0.415	1
MEFV	TP53	0.415	1
C3orf59	Amp_9p24.1	0.416	1
HUWE1	Del_13q14.2	0.416	1
KDM6A	Del_6p25.3	0.416	1
PIK3CA	8p-Del	0.416	1
RAC1	Del_4q35.2	0.416	1
RAC1	Del_13q14.2	0.416	1
RASA1	11p-Del	0.416	1
RASA1	Amp_12q15	0.416	1
RASA1	Del_6p25.3	0.416	1
RB1	11p-Del	0.416	1
RB1	Amp_12q15	0.416	1
RB1	Del_6p25.3	0.416	1
RHOA	Del_16q23.1	0.416	1
TGFBR2	5p-Amp	0.416	1
Amp_11p13	Amp_18q11.2	0.416	1
MEFV	Amp_12p13.33	0.417	1
PIK3R1	Amp_9p13.3	0.417	1
TIGD4	Amp_20q11.22	0.417	1
VEZF1	Amp_9p13.3	0.417	1
Amp_9p23	Del_17q25.3	0.417	1
Del_13q12.11	Del_Xq21.33	0.417	1
CASP8	NLRP8	0.418	1
CASP8	9q-Del	0.418	1
HLA-A	PIK3CA	0.418	1
HRAS	Del_Xp21.3	0.418	1
KRT17	Del_4q35.2	0.418	1
SMAD4	Amp_2q31.2	0.418	1
7q-Amp	Del_2q22.1	0.418	1
8p-Amp	10p-Del	0.418	1
8p-Amp	Del_5q12.1	0.418	1
Xp-Del	Del_2q22.1	0.418	1
ADAM19	Del_10q23.31	0.419	1
CASP8	12p-Amp	0.419	1
CASP8	14q-Amp	0.419	1
CREBBP	Del_14q11.2	0.419	1
HRAS	PTEN	0.419	1
HRAS	3q-Del	0.419	1
KIAA1267	Del_10q23.31	0.419	1
KIAA1267	Del_11p15.5	0.419	1
PTEN	8p-Amp	0.419	1
RAC1	8p-Amp	0.419	1
ZNF623	Del_10q23.31	0.419	1
ZNF623	Del_11p15.5	0.419	1
12p-Amp	Del_2q22.1	0.419	1
8p-Amp	3q-Del	0.419	1
BRAF	Del_4q22.1	0.42	1
BRAF	Del_10p15.3	0.42	1
CREBBP	8p-Del	0.42	1
CREBBP	Del_21q22.3	0.42	1
HUWE1	7p-Amp	0.42	1
HUWE1	13q-Del	0.42	1
HUWE1	Amp_13q22.1	0.42	1
MAPK1	Del_4q22.1	0.42	1
MAPK1	Del_10p15.3	0.42	1
MLL2	11p-Del	0.42	1
EP300	20q-Amp	0.421	1
FAT1	Del_1p36.21	0.421	1
Amp_20q11.22	Del_3p12.1	0.421	1
Amp_20q11.22	Del_Xp22.2	0.421	1
ADAM19	8q-Amp	0.422	1
KEAP1	MLL4	0.422	1
KEAP1	Del_5q12.1	0.422	1
MAPK1	Amp_8q11.21	0.422	1
MLL2	Del_11p15.5	0.422	1
NUDT11	Amp_8q11.21	0.422	1
THSD7A	Del_Xq21.33	0.422	1
9q-Amp	Del_5q15	0.422	1
10p-Del	Del_Xq21.33	0.422	1
Del_1p36.21	Del_Xq21.33	0.422	1
Del_4q21.3	Del_Xq21.33	0.422	1
Del_Xp21.3	Del_Xq21.33	0.422	1
EP300	Amp_12q15	0.423	1
CUL3	Amp_11p13	0.424	1
MEFV	18q-Del	0.424	1
PIK3CA	Del_13q12.11	0.424	1
PIK3R1	18q-Del	0.424	1
Del_16q23.1	Del_18q23	0.424	1
KRTAP5-5	Del_11q23.1	0.425	1
RAC1	Del_4p15.2	0.425	1
RAC1	Del_5q12.1	0.425	1
RAC1	Del_5q15	0.425	1
ZNF750	8p-Del	0.425	1
EPHA2	7q-Amp	0.426	1
EPHA2	9q-Del	0.426	1
EPHA2	Xp-Del	0.426	1
IRS4	3p-Del	0.426	1
Amp_9p24.1	Del_3p26.2	0.426	1
NOTCH1	Amp_9p13.3	0.427	1
9q-Del	Amp_7p11.2	0.427	1
Amp_2q31.2	Del_16q23.1	0.427	1
NSD1	Del_17q25.3	0.428	1
Amp_6q12	Del_1p13.2	0.428	1
Amp_9p24.1	Del_3p14.2	0.428	1
BRAF	8p-Del	0.429	1
BRAF	Del_21q22.3	0.429	1
HUWE1	NUDT11	0.429	1
KIAA1267	5q-Del	0.429	1
MAPK1	8p-Del	0.429	1
NLRP8	Amp_9p13.3	0.429	1
SMAD4	Del_Xp22.2	0.429	1
ZNF623	5q-Del	0.429	1
15q-Del	Amp_Xq28	0.429	1
Amp_12p13.33	Del_2q21.2	0.429	1
NAP1L2	Del_5q35.3	0.43	1
FBXW7	Amp_8q24.21	0.431	1
HLA-B	KDM6A	0.431	1
HLA-B	20q-Amp	0.431	1
KDM6A	TGFBR2	0.431	1
KDM6A	Del_17q25.3	0.431	1
RASA1	TGFBR2	0.431	1
TP53	Del_6p25.3	0.431	1
3q-Del	Amp_8q11.21	0.431	1
Amp_7p11.2	Del_10p11.21	0.431	1
Amp_9p13.3	Del_4p16.3	0.431	1
Del_2q22.1	Del_5q35.3	0.431	1
HUWE1	Del_5q12.1	0.432	1
MEFV	Del_10p11.21	0.432	1
PIK3R1	Del_10p11.21	0.432	1
VEZF1	Del_10p11.21	0.432	1
HUWE1	Del_7q36.1	0.433	1
MLL4	Amp_7q21.3	0.433	1
MLL4	Del_3p12.1	0.433	1
PIK3CA	Del_5q12.1	0.433	1
Amp_9p13.3	Del_14q32.32	0.433	1
CREBBP	3p-Del	0.434	1
NFE2L2	Del_13q12.11	0.434	1
TGFBR2	Amp_5p12	0.434	1
Amp_9p13.3	Del_10q23.31	0.434	1
C3orf59	Amp_9p23	0.435	1
C3orf59	Del_16q23.3	0.435	1
RHOA	Del_16q23.3	0.435	1
ZNF233	Del_3p24.1	0.435	1
18q-Del	Amp_20q11.22	0.435	1
C3orf59	3p-Del	0.436	1
CREBBP	11q-Del	0.436	1
CREBBP	Del_7q36.1	0.436	1
CREBBP	Del_19p13.3	0.436	1
FBXW7	Del_19p13.3	0.436	1
FGFR3	3p-Del	0.436	1
HRAS	21q-Del	0.436	1
7p-Amp	11q-Del	0.436	1
BRAF	11q-Del	0.437	1
BRAF	Del_7q36.1	0.437	1
HLA-B	Amp_8q11.21	0.437	1
MAPK1	11q-Del	0.437	1
MAPK1	Del_7q36.1	0.437	1
MAPK1	Del_19p13.3	0.437	1
MLL2	Xp-Del	0.437	1
NAP1L2	4p-Del	0.437	1
ASXL1	Amp_12q15	0.438	1
CUL3	Amp_8q24.21	0.438	1
CUL3	Amp_12q15	0.438	1
IRS4	11p-Del	0.438	1
IRS4	Amp_12q15	0.438	1
IRS4	Del_6p25.3	0.438	1
KEAP1	Amp_9p24.1	0.438	1
KEAP1	Del_16q23.1	0.438	1
PTPN14	Amp_12q15	0.438	1
PTPN14	Del_6p25.3	0.438	1
ZNF750	Del_19p13.3	0.438	1
5q-Del	Amp_12q15	0.438	1
Amp_7p11.2	Amp_18q11.2	0.438	1
Amp_18q11.2	Del_6p25.3	0.438	1
Amp_Xq28	Del_3p14.2	0.438	1
CREBBP	14q-Amp	0.439	1
DYSF	Amp_2q11.2	0.439	1
PIK3R1	Amp_7q21.3	0.439	1
14q-Amp	13q-Del	0.439	1
7p-Amp	Del_14q32.32	0.439	1
11q-Del	Amp_8q11.21	0.439	1
4p-Del	Amp_7p11.2	0.439	1
Amp_6q12	Amp_13q34	0.439	1
Amp_6q12	Del_7q31.1	0.439	1
Amp_13q22.1	Del_14q32.32	0.439	1
Amp_13q34	Del_7q31.1	0.439	1
CREBBP	SMAD4	0.44	1
CREBBP	15q-Del	0.44	1
EP300	Del_11p15.5	0.44	1
MLL4	ZNF750	0.44	1
SMAD4	7p-Amp	0.44	1
SMAD4	Amp_13q22.1	0.44	1
7p-Amp	15q-Del	0.44	1
Amp_9p13.3	Del_11q23.1	0.44	1
EPHA2	Amp_9p23	0.441	1
NLRP8	18q-Del	0.441	1
Amp_7q21.3	Del_16q23.3	0.441	1
HLA-A	NLRP8	0.442	1
HLA-A	7q-Amp	0.442	1
HLA-A	9q-Del	0.442	1
HLA-A	Xp-Del	0.442	1
HLA-A	Amp_15q26.3	0.442	1
HUWE1	THSD7A	0.442	1
HUWE1	10p-Del	0.442	1
KEAP1	9q-Del	0.442	1
KEAP1	Del_2q21.2	0.442	1
KRT17	9p-Del	0.442	1
THSD7A	Del_21q22.3	0.442	1
3q-Amp	Del_Xq21.33	0.442	1
9q-Amp	9q-Del	0.442	1
8p-Del	Del_Xp21.3	0.442	1
ASXL1	Del_5q35.3	0.443	1
IRS4	Del_5q35.3	0.443	1
PTPN14	Del_5q35.3	0.443	1
THSD7A	Del_18q23	0.443	1
3q-Amp	Del_10p11.21	0.443	1
ADAM19	Amp_5p12	0.444	1
C3orf59	20q-Amp	0.444	1
KIAA1267	Amp_5p12	0.444	1
NSD1	10p-Del	0.444	1
NSD1	Del_1p36.21	0.444	1
PIK3CA	Del_19p13.3	0.444	1
RHOA	20q-Amp	0.444	1
THSD7A	Amp_3q26.33	0.444	1
Amp_6q12	Del_11q23.1	0.444	1
CDKN2A	PIK3R1	0.445	1
FAT1	PIK3R1	0.445	1
FAT1	VEZF1	0.445	1
NFE2L2	3p-Del	0.445	1
PTEN	14q-Amp	0.445	1
RAC1	12p-Amp	0.445	1
RAC1	14q-Amp	0.445	1
ZNF750	Del_13q14.2	0.445	1
14q-Amp	3q-Del	0.445	1
Amp_7p11.2	Del_17q25.3	0.445	1
Amp_8q24.21	Amp_11p13	0.445	1
CASP8	Amp_6p12.1	0.446	1
HLA-B	Del_10q23.31	0.446	1
EPHA2	RASA1	0.447	1
HRAS	Del_Xq21.33	0.447	1
KEAP1	NOTCH1	0.447	1
MLL2	Del_10p11.21	0.447	1
4q-Del	Del_Xq21.33	0.447	1
EPHA2	Del_9p21.3	0.448	1
Amp_9p24.1	Amp_Xq28	0.448	1
MLL4	Del_3p24.1	0.449	1
KIAA1267	Amp_2q31.2	0.45	1
ZNF623	Amp_2q31.2	0.45	1
CASP8	KDM6A	0.451	1
CASP8	RASA1	0.451	1
EP300	18q-Del	0.451	1
GAGE2A	PIK3CA	0.451	1
KIAA1267	Amp_7p11.2	0.451	1
KRTAP5-5	PIK3CA	0.451	1
KRTAP5-5	3p-Del	0.451	1
HLA-B	Amp_20q11.22	0.452	1
NLRP8	Del_10p11.21	0.452	1
NOTCH1	1q-Amp	0.452	1
RAC1	9p-Del	0.452	1
SMAD4	THSD7A	0.452	1
SMAD4	10p-Del	0.452	1
SMAD4	Del_1p36.21	0.452	1
SMAD4	Del_4q21.3	0.452	1
SMAD4	Del_Xp21.3	0.452	1
TGFBR2	Amp_20q11.22	0.452	1
10p-Del	15q-Del	0.452	1
10p-Del	Amp_17q12	0.452	1
Amp_17q12	Del_Xp21.3	0.452	1
Amp_20q11.22	Del_17q25.3	0.452	1
ASXL1	4p-Del	0.453	1
ASXL1	Del_17q25.3	0.453	1
CDKN2A	8p-Del	0.453	1
CUL3	HLA-B	0.453	1
CUL3	TGFBR2	0.453	1
DYSF	Del_21q22.3	0.453	1
FAT1	HUWE1	0.453	1
HLA-B	IRS4	0.453	1
HLA-B	1q-Amp	0.453	1
HUWE1	Amp_2q11.2	0.453	1
HUWE1	Amp_13q34	0.453	1
HUWE1	Del_7q31.1	0.453	1
IRS4	TGFBR2	0.453	1
IRS4	4p-Del	0.453	1
IRS4	Del_17q25.3	0.453	1
OR6C65	TGFBR2	0.453	1
OR6C65	Del_17q25.3	0.453	1
Amp_9p24.1	Del_4q22.1	0.453	1
C3orf59	Del_11p15.5	0.454	1
EP300	FGFR3	0.454	1
EP300	RHOA	0.454	1
FGFR3	Del_11p15.5	0.454	1
HRAS	8p-Amp	0.454	1
RHOA	Del_10q23.31	0.454	1
RHOA	Del_11p15.5	0.454	1
TIGD4	Del_9p21.3	0.454	1
ZNF233	Del_9p21.3	0.454	1
8p-Amp	4q-Del	0.454	1
Amp_7p11.2	Del_4p16.3	0.454	1
Amp_9p13.3	Del_2q36.2	0.454	1
BRAF	Del_16q23.1	0.455	1
MAPK1	Del_16q23.1	0.455	1
PIK3CA	Del_10q23.31	0.455	1
PIK3R1	Del_1p13.2	0.455	1
PIK3R1	Del_2q36.2	0.455	1
5p-Amp	Del_11q23.1	0.455	1
Amp_6q12	Del_3p26.2	0.455	1
HLA-A	9p-Del	0.456	1
PIK3R1	Del_18q23	0.456	1
VEZF1	Del_18q23	0.456	1
HLA-A	Del_8p23.2	0.457	1
MLL4	Amp_13q34	0.457	1
MLL4	Del_7q31.1	0.457	1
THSD7A	14q-Amp	0.457	1
12p-Amp	10p-Del	0.457	1
8p-Amp	9p-Del	0.457	1
8p-Amp	Del_2q36.2	0.457	1
Amp_12q15	Del_11q23.1	0.457	1
MLL2	ZNF623	0.458	1
THSD7A	11q-Del	0.458	1
THSD7A	Del_19p13.3	0.458	1
TIGD4	Del_2q22.1	0.458	1
ZNF233	Del_2q22.1	0.458	1
ZNF750	3p-Del	0.458	1
10p-Del	Amp_8p11.23	0.458	1
BRAF	Del_11q23.1	0.459	1
CDKN2A	21q-Del	0.459	1
MAPK1	Amp_5p15.33	0.459	1
NFE2L2	3q-Del	0.459	1
NFE2L2	Amp_9p13.3	0.459	1
NOTCH1	8p-Del	0.459	1
PTEN	Amp_6p12.1	0.459	1
RAC1	Amp_6p12.1	0.459	1
ZNF750	9q-Del	0.459	1
ZNF750	Xp-Del	0.459	1
ZNF750	Del_2q21.2	0.459	1
3q-Amp	Amp_13q34	0.459	1
Amp_18q11.2	Del_10q23.31	0.459	1
Del_13q14.2	Del_Xq21.33	0.459	1
Del_14q11.2	Del_Xq21.33	0.459	1
KRT17	NSD1	0.46	1
7p-Amp	Amp_6p12.1	0.46	1
ADAM19	Amp_Xq28	0.461	1
ADAM19	Del_Xp22.2	0.461	1
HLA-B	20p-Amp	0.461	1
HLA-B	5q-Del	0.461	1
KIAA1267	Amp_Xq28	0.461	1
TGFBR2	Amp_18q11.2	0.461	1
Amp_5p12	Amp_9p24.1	0.461	1
KDM6A	Amp_9p13.3	0.462	1
KDM6A	Amp_12p13.33	0.462	1
20q-Amp	Amp_7q21.3	0.462	1
Amp_2q31.2	Del_16q23.3	0.462	1
Amp_8q24.21	Del_14q11.2	0.462	1
Del_10p11.21	Del_14q32.32	0.462	1
HLA-A	RASA1	0.463	1
KDM6A	KEAP1	0.463	1
KDM6A	9q-Amp	0.463	1
KEAP1	RB1	0.463	1
MEFV	Del_10p15.3	0.463	1
VEZF1	Del_10p15.3	0.463	1
C3orf59	20p-Amp	0.464	1
C3orf59	5q-Del	0.464	1
C3orf59	Amp_18q11.2	0.464	1
FGFR3	Amp_18q11.2	0.464	1
GAGE2A	NOTCH1	0.464	1
RHOA	20p-Amp	0.464	1
RHOA	5q-Del	0.464	1
RHOA	Amp_18q11.2	0.464	1
14q-Amp	Del_13q14.2	0.464	1
9q-Del	Amp_7q21.3	0.464	1
Amp_7q21.3	Del_2q21.2	0.464	1
CDKN2A	KDM6A	0.465	1
MLL4	Del_13q12.11	0.465	1
NAP1L2	Amp_9p13.3	0.465	1
NAP1L2	Amp_12p13.33	0.465	1
TIGD4	Amp_9p13.3	0.465	1
ZNF233	Amp_9p13.3	0.465	1
ZNF233	Amp_12p13.33	0.465	1
14q-Amp	Del_9p21.3	0.465	1
Amp_11q13.3	Del_16q23.1	0.465	1
CDKN2A	Amp_9p23	0.466	1
DYSF	11q-Del	0.466	1
HLA-A	Amp_9p23	0.466	1
KEAP1	Amp_9p23	0.466	1
KEAP1	Del_16q23.3	0.466	1
KRT17	Amp_8p11.23	0.466	1
MLL2	Amp_7p11.2	0.466	1
11q-Del	Amp_6q12	0.466	1
Amp_6q12	Del_19p13.3	0.466	1
EP300	Del_10p11.21	0.467	1
Amp_7p11.2	Del_3p12.1	0.467	1
Del_4p15.2	Del_Xq21.33	0.467	1
Del_5q15	Del_Xq21.33	0.467	1
PIK3CA	Del_4q21.3	0.468	1
THSD7A	Amp_11q13.3	0.468	1
ASXL1	EPHA2	0.469	1
CUL3	EPHA2	0.469	1
EPHA2	IRS4	0.469	1
EPHA2	1q-Amp	0.469	1
RB1	Amp_7p11.2	0.469	1
ZNF233	Del_3p26.2	0.47	1
HUWE1	VEZF1	0.471	1
MEFV	Del_21q22.3	0.471	1
NOTCH1	Amp_13q22.1	0.471	1
NSD1	21q-Del	0.471	1
PIK3R1	8p-Del	0.471	1
Amp_Xq28	Del_3p12.1	0.471	1
ADAM19	FBXW7	0.472	1
ADAM19	7p-Amp	0.472	1
FBXW7	ZNF623	0.472	1
HUWE1	Del_16q23.1	0.472	1
KEAP1	Amp_11q13.3	0.472	1
KIAA1267	7p-Amp	0.472	1
RAC1	Amp_11p13	0.472	1
THSD7A	Amp_20q11.22	0.472	1
ZNF233	18q-Del	0.472	1
ZNF623	7p-Amp	0.472	1
ZNF623	13q-Del	0.472	1
12p-Amp	Del_Xq21.33	0.472	1
8p-Amp	Del_4q22.1	0.472	1
8p-Amp	Del_10p15.3	0.472	1
3q-Del	Amp_11p13	0.472	1
Amp_9p24.1	Del_21q22.3	0.472	1
BRAF	Del_16q23.3	0.473	1
CASP8	Amp_11p13	0.473	1
MAPK1	Del_16q23.3	0.473	1
NFE2L2	18q-Del	0.473	1
NUDT11	Amp_9p23	0.473	1
RAC1	Del_3p14.2	0.473	1
RB1	18q-Del	0.473	1
20p-Amp	18q-Del	0.473	1
CDKN2A	Del_1q44	0.474	1
HRAS	SMAD4	0.476	1
HRAS	15q-Del	0.476	1
HRAS	Amp_17q12	0.476	1
PTEN	Amp_5p15.33	0.476	1
RAC1	Del_11q23.1	0.476	1
SMAD4	8p-Amp	0.476	1
SMAD4	4q-Del	0.476	1
14q-Amp	Del_3p26.2	0.476	1
8p-Amp	Amp_17q12	0.476	1
Amp_9p23	Del_2q36.2	0.476	1
DYSF	7q-Amp	0.477	1
DYSF	9q-Del	0.477	1
FGFR3	8q-Amp	0.477	1
GAGE2A	8q-Amp	0.477	1
NFE2L2	THSD7A	0.477	1
NLRP8	Del_7q31.1	0.477	1
14q-Amp	Del_5q12.1	0.477	1
7q-Amp	Amp_6q12	0.477	1
9q-Del	Amp_6q12	0.477	1
Amp_3q26.33	Amp_11p13	0.477	1
Amp_7p11.2	Del_5q12.1	0.477	1
Amp_15q26.3	Del_7q31.1	0.477	1
MLL2	RB1	0.478	1
NOTCH1	Amp_6p12.1	0.478	1
THSD7A	Amp_8q24.21	0.478	1
Amp_5p12	Del_11q23.1	0.478	1
Amp_8q24.21	Del_4q21.3	0.478	1
FBXW7	Del_9p21.3	0.479	1
HLA-A	5p-Amp	0.479	1
MLL2	Del_9p21.3	0.479	1
NSD1	RAC1	0.479	1
CREBBP	Del_3p14.2	0.48	1
DYSF	Del_4p16.3	0.48	1
DYSF	Del_4q35.2	0.48	1
FAT1	Del_5q15	0.48	1
HLA-A	20q-Amp	0.48	1
PIK3R1	Del_7q36.1	0.48	1
PIK3R1	Del_19p13.3	0.48	1
VEZF1	11q-Del	0.48	1
20q-Amp	Amp_2q31.2	0.48	1
Amp_13q22.1	Del_8p23.2	0.48	1
NOTCH1	Del_10p11.21	0.481	1
13q-Del	Amp_11p13	0.481	1
Del_1p13.2	Del_14q11.2	0.481	1
BRAF	20q-Amp	0.482	1
MLL4	Del_21q22.3	0.482	1
NUDT11	20q-Amp	0.482	1
3p-Del	Amp_11p13	0.482	1
ADAM19	10p-Del	0.483	1
ADAM19	Del_4q21.3	0.483	1
ADAM19	Del_Xp21.3	0.483	1
ZNF623	10p-Del	0.483	1
ZNF623	Del_1p36.21	0.483	1
ZNF623	Del_4q21.3	0.483	1
Amp_9p13.3	Del_8p23.2	0.483	1
RHOA	Amp_2q31.2	0.484	1
Amp_7q21.3	Del_10q23.31	0.484	1
ASXL1	CASP8	0.485	1
ASXL1	HLA-A	0.485	1
CASP8	OR6C65	0.485	1
CUL3	HLA-A	0.485	1
CUL3	KEAP1	0.485	1
CUL3	9q-Amp	0.485	1
CUL3	Del_2q22.1	0.485	1
EPHA2	5q-Del	0.485	1
EPHA2	Amp_18q11.2	0.485	1
HLA-A	1q-Amp	0.485	1
IRS4	Del_2q22.1	0.485	1
KEAP1	OR6C65	0.485	1
OR6C65	9q-Amp	0.485	1
PTPN14	9q-Amp	0.485	1
RHOA	Del_3p14.2	0.485	1
CDKN2A	Del_19p13.3	0.486	1
FBXW7	TP53	0.486	1
JUB	11p-Del	0.486	1
JUB	Amp_12q15	0.486	1
JUB	Del_9q21.11	0.486	1
Amp_11p13	Amp_12p13.33	0.486	1
Del_6p25.3	Del_Xp22.2	0.486	1
NAP1L2	Amp_7q21.3	0.487	1
NOTCH1	Del_7q36.1	0.487	1
PIK3CA	Amp_18q11.2	0.487	1
PTEN	Amp_12q15	0.487	1
PTEN	Del_6p25.3	0.487	1
RAC1	Amp_12q15	0.487	1
RAC1	Del_6p25.3	0.487	1
RAC1	Del_9q21.11	0.487	1
3q-Del	Amp_12q15	0.487	1
Xp-Del	Del_2q36.2	0.487	1
SMAD4	Del_14q11.2	0.488	1
Amp_17q12	Del_14q11.2	0.488	1
MLL2	NSD1	0.489	1
PTEN	Amp_8p11.23	0.489	1
CREBBP	4p-Del	0.49	1
FAT1	Del_2q22.1	0.49	1
HLA-A	NSD1	0.49	1
HLA-B	4p-Del	0.49	1
DYSF	Del_4p15.2	0.491	1
DYSF	Del_5q12.1	0.491	1
GAGE2A	Amp_5p12	0.491	1
THSD7A	Amp_9p24.1	0.491	1
TP53	Del_2q36.2	0.491	1
Amp_9p24.1	Del_Xp21.3	0.491	1
BRAF	EP300	0.492	1
BRAF	Del_10q23.31	0.492	1
BRAF	Del_11p15.5	0.492	1
DYSF	Amp_9p24.1	0.492	1
EP300	MAPK1	0.492	1
EP300	NUDT11	0.492	1
HLA-B	Amp_2q31.2	0.492	1
MAPK1	Del_10q23.31	0.492	1
Amp_9p24.1	Amp_13q34	0.492	1
Amp_9p24.1	Del_7q31.1	0.492	1
Amp_9p23	Del_18q23	0.492	1
Amp_13q34	Del_16q23.1	0.492	1
Del_16q23.3	Del_18q23	0.492	1
HRAS	12p-Amp	0.493	1
HRAS	14q-Amp	0.493	1
CDKN2A	ZNF750	0.494	1
C3orf59	Amp_Xq28	0.495	1
EP300	9q-Amp	0.495	1
FGFR3	Amp_Xq28	0.495	1
FGFR3	Del_Xp22.2	0.495	1
KEAP1	Del_10q23.31	0.495	1
KEAP1	Del_11p15.5	0.495	1
KIAA1267	21q-Del	0.495	1
MLL4	NLRP8	0.495	1
MLL4	9q-Del	0.495	1
MLL4	Xp-Del	0.495	1
MLL4	Amp_15q26.3	0.495	1
NFE2L2	Del_4p16.3	0.495	1
NFE2L2	Del_4q35.2	0.495	1
NFE2L2	Del_13q14.2	0.495	1
RB1	Amp_7q21.3	0.495	1
RHOA	Del_Xp22.2	0.495	1
SMAD4	Amp_18p11.31	0.495	1
ZNF623	21q-Del	0.495	1
9q-Amp	Del_11p15.5	0.495	1
Amp_11q13.3	Del_10q23.31	0.495	1
ASXL1	Amp_9p13.3	0.496	1
ASXL1	Amp_12p13.33	0.496	1
GAGE2A	Amp_7p11.2	0.496	1
IRS4	Amp_9p13.3	0.496	1
MLL4	3q-Amp	0.496	1
8p-Del	Amp_12p13.33	0.496	1
DYSF	KDM6A	0.497	1
DYSF	RASA1	0.497	1
KDM6A	Amp_2q11.2	0.497	1
KDM6A	Amp_13q34	0.497	1
NUDT11	PIK3CA	0.497	1
PIK3R1	Del_16q23.1	0.497	1
RASA1	Del_7q31.1	0.497	1
TGFBR2	Del_11q23.1	0.497	1
VEZF1	Amp_9p24.1	0.497	1
VEZF1	Del_16q23.1	0.497	1
Amp_11p13	Del_3p24.1	0.497	1
HRAS	NSD1	0.498	1
RAC1	Amp_20q11.22	0.498	1
RHOA	Amp_5p12	0.498	1
20q-Amp	Del_2q36.2	0.498	1
10p-Del	Amp_11p13	0.498	1
11p-Del	Amp_8q24.21	0.498	1
3q-Del	Amp_20q11.22	0.498	1
8q-Amp	Del_5q35.3	0.499	1
11q-Del	Del_2q22.1	0.499	1
PIK3CA	Amp_2q11.2	0.5	1
SMAD4	12p-Amp	0.5	1
SMAD4	14q-Amp	0.5	1
12p-Amp	15q-Del	0.5	1
14q-Amp	15q-Del	0.5	1
Amp_12q15	Del_2q22.1	0.5	1
Amp_17q12	Del_14q32.32	0.5	1
BRAF	20p-Amp	0.501	1
BRAF	5q-Del	0.501	1
HLA-B	3q-Del	0.501	1
KRTAP5-5	MLL2	0.501	1
MAPK1	Amp_18q11.2	0.501	1
NUDT11	20p-Amp	0.501	1
RAC1	Del_17q25.3	0.501	1
TGFBR2	3q-Del	0.501	1
20q-Amp	Del_Xp22.2	0.501	1
3q-Del	Del_17q25.3	0.501	1
ASXL1	ZNF750	0.502	1
C3orf59	Del_3p12.1	0.502	1
KRT17	Del_3p14.2	0.502	1
KRT17	Del_8p23.2	0.502	1
KRTAP5-5	Del_9p21.3	0.502	1
OR6C65	ZNF750	0.502	1
PTPN14	ZNF750	0.502	1
FBXW7	Del_9q21.11	0.503	1
TIGD4	Del_1p13.2	0.503	1
TIGD4	Del_2q36.2	0.503	1
7p-Amp	Del_6p25.3	0.503	1
8q-Amp	Del_21q22.3	0.503	1
11p-Del	Amp_13q22.1	0.503	1
Amp_12q15	Amp_13q22.1	0.503	1
EMG1	Amp_8q11.21	0.504	1
HRAS	Del_19p13.3	0.504	1
NLRP8	Del_13q12.11	0.504	1
PIK3CA	Del_16q23.1	0.504	1
8p-Amp	11q-Del	0.504	1
Amp_8q11.21	Del_1q44	0.504	1
Amp_9p23	Amp_13q22.1	0.504	1
Amp_13q22.1	Del_16q23.3	0.504	1
C3orf59	Amp_7p11.2	0.505	1
CASP8	PIK3CA	0.505	1
FGFR3	Amp_7p11.2	0.505	1
RHOA	Amp_7p11.2	0.505	1
3p-Del	Del_2q22.1	0.505	1
ADAM19	HRAS	0.506	1
ADAM19	4q-Del	0.506	1
C3orf59	FBXW7	0.506	1
C3orf59	7p-Amp	0.506	1
C3orf59	Amp_13q22.1	0.506	1
FBXW7	RHOA	0.506	1
FGFR3	7p-Amp	0.506	1
HRAS	ZNF623	0.506	1
JUB	Del_4q35.2	0.506	1
OR6C65	18q-Del	0.506	1
RHOA	7p-Amp	0.506	1
RHOA	13q-Del	0.506	1
TP53	1q-Amp	0.506	1
ZNF623	4q-Del	0.506	1
14q-Amp	Del_2q36.2	0.506	1
1q-Amp	18q-Del	0.506	1
Amp_Xq28	Del_13q14.2	0.506	1
CREBBP	3q-Amp	0.507	1
FBXW7	3q-Amp	0.507	1
NFE2L2	Del_4p15.2	0.507	1
HLA-B	Amp_Xq28	0.508	1
HLA-B	Del_Xp22.2	0.508	1
KEAP1	Amp_5p12	0.508	1
RAC1	Del_3p24.1	0.508	1
NSD1	Del_4q22.1	0.509	1
TP53	20p-Amp	0.509	1
Amp_7p11.2	Del_2q36.2	0.509	1
HLA-A	20p-Amp	0.51	1
HLA-A	Amp_18q11.2	0.51	1
KEAP1	Amp_18q11.2	0.51	1
ZNF233	Del_4q22.1	0.51	1
9q-Amp	Amp_18q11.2	0.51	1
4p-Del	Amp_20q11.22	0.51	1
HUWE1	NLRP8	0.511	1
KIAA1267	Del_13q12.11	0.511	1
14q-Amp	Del_14q11.2	0.511	1
10p-Del	Amp_8q11.21	0.511	1
8p-Del	Xp-Del	0.511	1
Amp_8q11.21	Del_4q21.3	0.511	1
FGFR3	MLL2	0.512	1
MLL2	RHOA	0.512	1
NFE2L2	8q-Amp	0.512	1
HRAS	Amp_6p12.1	0.513	1
IRS4	Amp_7p11.2	0.513	1
MLL2	Amp_8p11.23	0.513	1
NFE2L2	15q-Del	0.513	1
NFE2L2	4q-Del	0.513	1
NFE2L2	Amp_17q12	0.513	1
OR6C65	Amp_7p11.2	0.513	1
11p-Del	Del_Xq21.33	0.513	1
8p-Del	Amp_9p23	0.513	1
Amp_8q24.21	Del_14q32.32	0.513	1
Del_9q21.11	Del_Xq21.33	0.513	1
C3orf59	Del_3p24.1	0.514	1
HUWE1	18q-Del	0.514	1
KEAP1	Amp_20q11.22	0.514	1
MEFV	Amp_9p23	0.514	1
NLRP8	Xp-Del	0.514	1
NLRP8	Amp_15q26.3	0.514	1
NLRP8	Del_2q21.2	0.514	1
PIK3R1	Amp_9p23	0.514	1
PIK3R1	Del_16q23.3	0.514	1
RHOA	Del_3p24.1	0.514	1
VEZF1	Del_16q23.3	0.514	1
7q-Amp	9q-Del	0.514	1
7q-Amp	Del_2q21.2	0.514	1
9q-Del	Amp_15q26.3	0.514	1
Xp-Del	Del_2q21.2	0.514	1
Amp_9p13.3	Del_6p25.3	0.514	1
Amp_9p13.3	Del_9q21.11	0.514	1
Amp_15q26.3	Del_2q21.2	0.514	1
HLA-A	Del_9p21.3	0.515	1
JUB	Amp_5p12	0.515	1
MLL4	RASA1	0.515	1
NOTCH1	Amp_11p13	0.515	1
BRAF	NOTCH1	0.516	1
C3orf59	10p-Del	0.516	1
C3orf59	Del_1p36.21	0.516	1
C3orf59	Del_4q21.3	0.516	1
EPHA2	PTEN	0.516	1
EPHA2	RAC1	0.516	1
EPHA2	3q-Del	0.516	1
FGFR3	THSD7A	0.516	1
FGFR3	Del_1p36.21	0.516	1
KRT17	Del_3p12.1	0.516	1
MLL4	Del_13q14.2	0.516	1
RHOA	10p-Del	0.516	1
RHOA	Del_4q21.3	0.516	1
RHOA	Del_Xp21.3	0.516	1
OR6C65	Del_10p11.21	0.517	1
PTPN14	Del_10p11.21	0.517	1
Amp_7p11.2	Del_3p26.2	0.517	1
ADAM19	Del_14q11.2	0.518	1
CDKN2A	IRS4	0.518	1
CDKN2A	OR6C65	0.518	1
CDKN2A	Del_6p25.3	0.518	1
CDKN2A	Del_9q21.11	0.518	1
CUL3	FAT1	0.518	1
FAT1	1q-Amp	0.518	1
FAT1	Amp_12q15	0.518	1
RAC1	Del_5q35.3	0.518	1
TIGD4	8p-Del	0.518	1
ZNF233	8p-Del	0.518	1
ASXL1	Amp_2q11.2	0.519	1
ASXL1	Amp_6q12	0.519	1
CDKN2A	Amp_Xq28	0.519	1
CDKN2A	Del_Xp22.2	0.519	1
DYSF	OR6C65	0.519	1
EP300	Del_1p13.2	0.519	1
EP300	Del_Xp22.2	0.519	1
IRS4	Amp_2q11.2	0.519	1
KRT17	Amp_9p13.3	0.519	1
KRT17	Amp_12p13.33	0.519	1
OR6C65	Amp_6q12	0.519	1
PTPN14	Amp_2q11.2	0.519	1
PTPN14	Amp_6q12	0.519	1
PTPN14	Del_7q31.1	0.519	1
THSD7A	Amp_12q15	0.519	1
THSD7A	Del_9q21.11	0.519	1
1q-Amp	Del_7q31.1	0.519	1
10p-Del	Amp_12q15	0.519	1
Amp_9p23	Del_7q31.1	0.519	1
Amp_13q34	Del_16q23.3	0.519	1
Amp_Xq28	Del_10q23.31	0.519	1
Del_6p25.3	Del_Xp21.3	0.519	1
MLL2	PIK3CA	0.52	1
BRAF	Amp_2q31.2	0.521	1
FBXW7	Amp_18p11.31	0.521	1
MAPK1	Amp_2q31.2	0.521	1
Amp_13q22.1	Amp_18p11.31	0.521	1
ASXL1	MLL2	0.522	1
CDKN2A	NAP1L2	0.522	1
CDKN2A	TIGD4	0.522	1
CREBBP	20q-Amp	0.522	1
MAPK1	Del_9p21.3	0.522	1
MLL2	OR6C65	0.522	1
MLL2	PTPN14	0.522	1
RB1	Del_8p23.2	0.522	1
20q-Amp	7p-Amp	0.522	1
Del_9p21.3	Del_16q23.3	0.522	1
HLA-A	Amp_8q11.21	0.523	1
KEAP1	Amp_8q11.21	0.523	1
MEFV	20q-Amp	0.523	1
PIK3CA	RAC1	0.523	1
RAC1	3p-Del	0.523	1
NLRP8	Del_7q36.1	0.524	1
Amp_7p11.2	Del_3p14.2	0.524	1
Del_2q21.2	Del_19p13.3	0.524	1
CREBBP	Del_17q25.3	0.525	1
FBXW7	HLA-B	0.525	1
HLA-B	13q-Del	0.525	1
HLA-B	Amp_13q22.1	0.525	1
KRT17	Del_3p24.1	0.525	1
TGFBR2	13q-Del	0.525	1
TGFBR2	Amp_13q22.1	0.525	1
7p-Amp	Del_17q25.3	0.525	1
Del_16q23.3	Del_Xp21.3	0.525	1
KRT17	18q-Del	0.526	1
NAP1L2	Del_7q36.1	0.526	1
PIK3R1	Amp_5p15.33	0.526	1
4q-Del	Amp_20q11.22	0.526	1
Amp_11p13	Del_4q35.2	0.526	1
Amp_12q15	Del_3p12.1	0.526	1
EMG1	Amp_5p15.33	0.527	1
EMG1	Del_11q23.1	0.527	1
HLA-B	Del_Xq21.33	0.527	1
SMAD4	Amp_11p13	0.527	1
15q-Del	Amp_11p13	0.527	1
Amp_9p13.3	Del_Xp22.2	0.527	1
Amp_11p13	Amp_17q12	0.527	1
Del_1q44	Del_11q23.1	0.527	1
C3orf59	21q-Del	0.528	1
DYSF	NOTCH1	0.528	1
FGFR3	21q-Del	0.528	1
JUB	Amp_7p11.2	0.528	1
NOTCH1	Amp_13q34	0.528	1
RAC1	4p-Del	0.528	1
RHOA	21q-Del	0.528	1
Amp_9p13.3	Del_2q22.1	0.528	1
OR6C65	Amp_7q21.3	0.529	1
TGFBR2	Del_2q22.1	0.529	1
ADAM19	12p-Amp	0.53	1
ADAM19	14q-Amp	0.53	1
ADAM19	Del_14q32.32	0.53	1
KIAA1267	12p-Amp	0.53	1
RASA1	Del_4q22.1	0.53	1
ZNF623	12p-Amp	0.53	1
Del_11q23.1	Del_Xq21.33	0.53	1
BRAF	Del_Xp22.2	0.531	1
HUWE1	Del_9p21.3	0.531	1
JUB	NUDT11	0.531	1
MAPK1	Del_Xp22.2	0.531	1
8q-Amp	11q-Del	0.531	1
Amp_7q21.3	Del_4q22.1	0.531	1
EP300	VEZF1	0.532	1
HLA-A	PTEN	0.532	1
KEAP1	3q-Del	0.532	1
RAC1	9q-Amp	0.532	1
VEZF1	Del_11p15.5	0.532	1
9q-Amp	3q-Del	0.532	1
HUWE1	Del_10p11.21	0.533	1
KRT17	Del_10p11.21	0.533	1
NSD1	8p-Del	0.533	1
TIGD4	Del_18q23	0.533	1
KDM6A	Xp-Del	0.534	1
KDM6A	Amp_15q26.3	0.534	1
KDM6A	Del_2q21.2	0.534	1
KRTAP5-5	Del_13q12.11	0.534	1
NLRP8	RB1	0.534	1
NLRP8	3q-Amp	0.534	1
RASA1	Amp_15q26.3	0.534	1
RASA1	Del_2q21.2	0.534	1
RB1	Amp_15q26.3	0.534	1
1q-Amp	Del_18q23	0.534	1
ADAM19	3q-Amp	0.535	1
CREBBP	Del_4p16.3	0.535	1
CREBBP	Del_13q14.2	0.535	1
RAC1	Del_9p21.3	0.535	1
ZNF623	3q-Amp	0.535	1
ZNF750	20p-Amp	0.535	1
ZNF750	Amp_18q11.2	0.535	1
3q-Amp	Amp_12q15	0.535	1
Amp_13q22.1	Del_13q14.2	0.535	1
ASXL1	MLL4	0.536	1
EP300	8q-Amp	0.536	1
FBXW7	Del_2q22.1	0.536	1
IRS4	MLL4	0.536	1
MAPK1	8q-Amp	0.536	1
THSD7A	3q-Amp	0.536	1
14q-Amp	Del_21q22.3	0.536	1
8q-Amp	Del_11p15.5	0.536	1
8p-Del	Del_14q32.32	0.536	1
Amp_7p11.2	Del_4q22.1	0.536	1
CREBBP	Amp_3q26.33	0.537	1
FAT1	Del_11p15.5	0.537	1
JUB	20p-Amp	0.537	1
21q-Del	Amp_12q15	0.537	1
ZNF750	Amp_8q24.21	0.538	1
C3orf59	4q-Del	0.539	1
CDKN2A	Del_14q11.2	0.539	1
FAT1	Del_14q11.2	0.539	1
FGFR3	HRAS	0.539	1
HRAS	RHOA	0.539	1
RHOA	4q-Del	0.539	1
VEZF1	Amp_11q13.3	0.539	1
5p-Amp	11q-Del	0.539	1
SMAD4	11p-Del	0.54	1
SMAD4	Amp_12q15	0.54	1
SMAD4	Del_6p25.3	0.54	1
SMAD4	Del_9q21.11	0.54	1
3q-Amp	Del_10p15.3	0.54	1
Amp_11q13.3	Amp_18q11.2	0.54	1
EPHA2	Del_Xq21.33	0.541	1
HLA-B	Del_4q21.3	0.541	1
HLA-B	Del_Xp21.3	0.541	1
MLL2	Amp_Xq28	0.541	1
THSD7A	Del_17q25.3	0.541	1
8q-Amp	Del_1p36.21	0.541	1
10p-Del	Del_17q25.3	0.541	1
Amp_9p23	Del_3p12.1	0.541	1
BRAF	FBXW7	0.542	1
BRAF	7p-Amp	0.542	1
BRAF	13q-Del	0.542	1
BRAF	Amp_13q22.1	0.542	1
CDKN2A	Del_7q31.1	0.542	1
CREBBP	NUDT11	0.542	1
DYSF	FAT1	0.542	1
FAT1	Del_7q31.1	0.542	1
FBXW7	MAPK1	0.542	1
FBXW7	NUDT11	0.542	1
HLA-B	Amp_9p13.3	0.542	1
HUWE1	RASA1	0.542	1
KDM6A	Del_21q22.3	0.542	1
MAPK1	7p-Amp	0.542	1
MAPK1	13q-Del	0.542	1
MAPK1	Amp_13q22.1	0.542	1
MEFV	20p-Amp	0.542	1
MEFV	5q-Del	0.542	1
NAP1L2	Amp_9p24.1	0.542	1
NAP1L2	Del_16q23.1	0.542	1
NUDT11	Amp_13q22.1	0.542	1
PIK3R1	Amp_18q11.2	0.542	1
RASA1	8p-Del	0.542	1
RB1	8p-Del	0.542	1
TGFBR2	Amp_9p13.3	0.542	1
TIGD4	Amp_9p24.1	0.542	1
VEZF1	Amp_18q11.2	0.542	1
ZNF233	Amp_9p24.1	0.542	1
ZNF233	Del_16q23.1	0.542	1
JUB	18q-Del	0.543	1
KIAA1267	NFE2L2	0.543	1
KIAA1267	Amp_6p12.1	0.543	1
NFE2L2	ZNF623	0.543	1
RASA1	Amp_3q26.33	0.543	1
SMAD4	Amp_8q11.21	0.543	1
Amp_11q13.3	Del_17q25.3	0.543	1
Del_13q12.11	Del_19p13.3	0.543	1
PIK3R1	Amp_8q24.21	0.544	1
VEZF1	Amp_8q24.21	0.544	1
Amp_20q11.22	Del_4q22.1	0.544	1
PIK3CA	Del_5q35.3	0.545	1
CREBBP	Amp_5p15.33	0.546	1
DYSF	5p-Amp	0.546	1
NFE2L2	9p-Del	0.546	1
NFE2L2	Del_4q22.1	0.546	1
Amp_5p15.33	Amp_13q22.1	0.546	1
CREBBP	Amp_5p12	0.547	1
DYSF	Del_11p15.5	0.547	1
EP300	Amp_2q11.2	0.547	1
EP300	Amp_6q12	0.547	1
EP300	Amp_13q34	0.547	1
EP300	Del_7q31.1	0.547	1
PTEN	ZNF750	0.547	1
RAC1	ZNF750	0.547	1
ZNF750	Amp_20q11.22	0.547	1
7p-Amp	Amp_5p12	0.547	1
13q-Del	Amp_5p12	0.547	1
21q-Del	Amp_9p23	0.547	1
Amp_6q12	Del_10q23.31	0.547	1
EPHA2	7p-Amp	0.548	1
NOTCH1	PTEN	0.548	1
21q-Del	Amp_8q11.21	0.548	1
EP300	Amp_5p15.33	0.549	1
EP300	Del_11q23.1	0.549	1
GAGE2A	3q-Amp	0.549	1
KRTAP5-5	3q-Amp	0.549	1
NLRP8	Amp_9p24.1	0.549	1
9q-Del	Del_16q23.1	0.549	1
Amp_9p24.1	Amp_15q26.3	0.549	1
Amp_11q13.3	Del_2q22.1	0.549	1
EMG1	3p-Del	0.55	1
NFE2L2	Del_14q32.32	0.55	1
THSD7A	Amp_18p11.31	0.55	1
Amp_18p11.31	Del_4q21.3	0.55	1
ASXL1	Del_1p13.2	0.551	1
ASXL1	Del_2q36.2	0.551	1
C3orf59	Del_14q11.2	0.551	1
CDKN2A	KIAA1267	0.551	1
KIAA1267	Del_13q14.2	0.551	1
RHOA	Del_14q11.2	0.551	1
ZNF623	Del_4p16.3	0.551	1
ZNF623	Del_13q14.2	0.551	1
1q-Amp	Del_2q36.2	0.551	1
Amp_11p13	Del_14q11.2	0.551	1
Amp_11q13.3	Del_16q23.3	0.551	1
BRAF	10p-Del	0.552	1
BRAF	Del_1p36.21	0.552	1
BRAF	Del_4q21.3	0.552	1
BRAF	Del_Xp21.3	0.552	1
FBXW7	Amp_12p13.33	0.552	1
MAPK1	10p-Del	0.552	1
MAPK1	Del_1p36.21	0.552	1
MAPK1	Del_4q21.3	0.552	1
MAPK1	Del_Xp21.3	0.552	1
NOTCH1	Del_6p25.3	0.552	1
NUDT11	Del_1p36.21	0.552	1
12p-Amp	11q-Del	0.552	1
14q-Amp	11q-Del	0.552	1
20q-Amp	Del_7q36.1	0.552	1
Del_9p21.3	Del_16q23.1	0.552	1
BRAF	Amp_3q26.33	0.553	1
KDM6A	RASA1	0.553	1
KDM6A	RB1	0.553	1
RASA1	RB1	0.553	1
HLA-B	15q-Del	0.554	1
KDM6A	Del_19p13.3	0.554	1
NLRP8	Del_4q35.2	0.554	1
NLRP8	Del_13q14.2	0.554	1
RASA1	11q-Del	0.554	1
RB1	11q-Del	0.554	1
RB1	Del_19p13.3	0.554	1
SMAD4	TGFBR2	0.554	1
TGFBR2	Amp_17q12	0.554	1
TGFBR2	Del_9p21.3	0.554	1
7q-Amp	Del_4q35.2	0.554	1
8p-Amp	Del_5q35.3	0.554	1
8p-Amp	Del_6p25.3	0.554	1
Amp_8p11.23	Del_2q22.1	0.554	1
Amp_17q12	Del_17q25.3	0.554	1
Amp_20q11.22	Del_14q11.2	0.554	1
ASXL1	NLRP8	0.555	1
ASXL1	7q-Amp	0.555	1
ASXL1	Amp_15q26.3	0.555	1
CUL3	Xp-Del	0.555	1
GAGE2A	Amp_18p11.31	0.555	1
HLA-A	Del_Xp22.2	0.555	1
HUWE1	Del_11p15.5	0.555	1
IRS4	9q-Del	0.555	1
KRTAP5-5	Amp_18p11.31	0.555	1
NLRP8	1q-Amp	0.555	1
OR6C65	Amp_15q26.3	0.555	1
PTPN14	7q-Amp	0.555	1
PTPN14	Amp_15q26.3	0.555	1
PTPN14	Del_2q21.2	0.555	1
5p-Amp	Amp_17q12	0.555	1
Amp_2q31.2	Del_8p23.2	0.555	1
HLA-A	Del_Xq21.33	0.556	1
KEAP1	Del_Xq21.33	0.556	1
KIAA1267	Amp_11p13	0.556	1
MAPK1	Amp_5p12	0.556	1
MLL2	Amp_12p13.33	0.556	1
9q-Amp	Del_Xq21.33	0.556	1
C3orf59	Del_3p26.2	0.557	1
PIK3CA	5p-Amp	0.557	1
RHOA	Del_3p26.2	0.557	1
8p-Amp	Del_13q12.11	0.557	1
FBXW7	20p-Amp	0.558	1
FBXW7	Amp_18q11.2	0.558	1
HLA-B	21q-Del	0.558	1
NSD1	Amp_8p11.23	0.558	1
RAC1	Del_2q22.1	0.558	1
TGFBR2	21q-Del	0.558	1
7p-Amp	5q-Del	0.558	1
13q-Del	Amp_18q11.2	0.558	1
Amp_6p12.1	Amp_7p11.2	0.558	1
Amp_13q22.1	Amp_18q11.2	0.558	1
Del_5q35.3	Del_Xq21.33	0.558	1
JUB	Del_10p11.21	0.559	1
KIAA1267	Del_4p15.2	0.559	1
NAP1L2	Amp_9p23	0.559	1
NAP1L2	Del_16q23.3	0.559	1
TIGD4	Amp_9p23	0.559	1
ZNF233	Del_16q23.3	0.559	1
ZNF623	Del_4p15.2	0.559	1
Amp_9p24.1	Del_14q11.2	0.559	1
Del_2q22.1	Del_11q23.1	0.559	1
GAGE2A	Del_13q14.2	0.56	1
KRTAP5-5	Del_4p16.3	0.56	1
KRTAP5-5	Del_4q35.2	0.56	1
KRTAP5-5	Del_13q14.2	0.56	1
MLL4	20q-Amp	0.56	1
EP300	10p-Del	0.561	1
MEFV	Amp_2q31.2	0.561	1
NFE2L2	8p-Del	0.561	1
PIK3R1	Amp_2q31.2	0.561	1
20p-Amp	Amp_2q11.2	0.561	1
5q-Del	Amp_13q34	0.561	1
Del_2q22.1	Del_Xp21.3	0.561	1
C3orf59	12p-Amp	0.562	1
C3orf59	14q-Amp	0.562	1
CDKN2A	PIK3CA	0.562	1
FGFR3	12p-Amp	0.562	1
FGFR3	14q-Amp	0.562	1
KRT17	Del_10p15.3	0.562	1
PIK3CA	VEZF1	0.562	1
PIK3R1	3p-Del	0.562	1
RHOA	12p-Amp	0.562	1
RHOA	14q-Amp	0.562	1
RHOA	Del_14q32.32	0.562	1
9q-Amp	Del_3p26.2	0.562	1
BRAF	21q-Del	0.563	1
NUDT11	Amp_7p11.2	0.563	1
PTPN14	Del_10p15.3	0.563	1
THSD7A	Del_4q35.2	0.563	1
Amp_6q12	Del_3p14.2	0.563	1
Amp_7p11.2	Del_21q22.3	0.563	1
Del_13q14.2	Del_Xp21.3	0.563	1
ADAM19	Del_18q23	0.564	1
DYSF	PTEN	0.564	1
EPHA2	Del_4q21.3	0.564	1
KIAA1267	Del_18q23	0.564	1
NLRP8	Del_5q12.1	0.564	1
NLRP8	Del_5q15	0.564	1
NOTCH1	Del_18q23	0.564	1
NSD1	SMAD4	0.564	1
NSD1	Amp_17q12	0.564	1
PTEN	Amp_2q11.2	0.564	1
PTEN	Amp_6q12	0.564	1
RAC1	Amp_2q11.2	0.564	1
RAC1	Amp_6q12	0.564	1
RAC1	Amp_13q34	0.564	1
3q-Del	Amp_2q11.2	0.564	1
3q-Del	Amp_6q12	0.564	1
9p-Del	Amp_Xq28	0.564	1
KRTAP5-5	Del_4p15.2	0.565	1
KRTAP5-5	Del_5q15	0.565	1
NFE2L2	Amp_8q24.21	0.565	1
PIK3CA	Amp_9p23	0.565	1
18q-Del	Amp_7p11.2	0.565	1
Amp_11p13	Del_3p26.2	0.565	1
5p-Amp	Amp_2q31.2	0.566	1
8q-Amp	5q-Del	0.566	1
HUWE1	Amp_20q11.22	0.567	1
4p-Del	Del_Xq21.33	0.567	1
CREBBP	18q-Del	0.568	1
EPHA2	SMAD4	0.568	1
EPHA2	Amp_17q12	0.568	1
HLA-B	3q-Amp	0.568	1
PIK3CA	Del_5q15	0.568	1
PTEN	Amp_12p13.33	0.568	1
TIGD4	20q-Amp	0.568	1
20q-Amp	Del_13q14.2	0.568	1
18q-Del	Amp_9p13.3	0.568	1
18q-Del	Amp_12p13.33	0.568	1
3q-Del	Amp_11q13.3	0.568	1
Amp_8p11.23	Del_7q31.1	0.568	1
ADAM19	11p-Del	0.569	1
ADAM19	Del_9q21.11	0.569	1
KIAA1267	11p-Del	0.569	1
KIAA1267	Amp_12q15	0.569	1
TGFBR2	Del_10p11.21	0.569	1
ZNF623	11p-Del	0.569	1
ZNF623	Amp_12q15	0.569	1
ZNF623	Del_9q21.11	0.569	1
8p-Amp	4p-Del	0.569	1
4q-Del	Amp_9p23	0.569	1
Amp_8q11.21	Del_16q23.3	0.569	1
JUB	MEFV	0.57	1
JUB	PIK3R1	0.57	1
KRT17	Del_21q22.3	0.57	1
MAPK1	MLL2	0.57	1
MEFV	Amp_Xq28	0.57	1
MEFV	Del_Xp22.2	0.57	1
PIK3R1	Del_Xp22.2	0.57	1
VEZF1	Amp_Xq28	0.57	1
Amp_11p13	Del_14q32.32	0.57	1
CREBBP	KEAP1	0.571	1
EPHA2	Amp_9p13.3	0.571	1
FBXW7	HLA-A	0.571	1
KEAP1	13q-Del	0.571	1
KEAP1	Amp_13q22.1	0.571	1
9q-Amp	Amp_13q22.1	0.571	1
Amp_12q15	Del_5q15	0.571	1
MLL2	Amp_13q22.1	0.572	1
SMAD4	Amp_8p11.23	0.572	1
ZNF750	Del_Xq21.33	0.572	1
Amp_12q15	Del_14q11.2	0.572	1
ASXL1	RASA1	0.573	1
ASXL1	RB1	0.573	1
CDKN2A	Amp_18q11.2	0.573	1
CUL3	KDM6A	0.573	1
EP300	MLL4	0.573	1
FAT1	20p-Amp	0.573	1
FAT1	5q-Del	0.573	1
FAT1	Amp_18q11.2	0.573	1
IRS4	KDM6A	0.573	1
IRS4	RASA1	0.573	1
KDM6A	3q-Amp	0.573	1
MLL4	Del_11p15.5	0.573	1
OR6C65	RASA1	0.573	1
OR6C65	RB1	0.573	1
RB1	1q-Amp	0.573	1
ASXL1	8p-Del	0.574	1
BRAF	4q-Del	0.574	1
C3orf59	NFE2L2	0.574	1
C3orf59	Amp_6p12.1	0.574	1
CUL3	Del_21q22.3	0.574	1
FGFR3	Amp_6p12.1	0.574	1
HRAS	MAPK1	0.574	1
HRAS	NUDT11	0.574	1
HUWE1	IRS4	0.574	1
HUWE1	1q-Amp	0.574	1
IRS4	8p-Del	0.574	1
MAPK1	4q-Del	0.574	1
NUDT11	8p-Amp	0.574	1
OR6C65	8p-Del	0.574	1
PTPN14	Del_21q22.3	0.574	1
RHOA	Amp_6p12.1	0.574	1
1q-Amp	Del_21q22.3	0.574	1
EMG1	8q-Amp	0.575	1
HLA-B	4q-Del	0.575	1
JUB	Amp_2q31.2	0.575	1
NLRP8	Del_16q23.3	0.575	1
TGFBR2	4q-Del	0.575	1
7q-Amp	Del_16q23.3	0.575	1
8q-Amp	Del_1q44	0.575	1
9q-Del	Amp_9p23	0.575	1
9q-Del	Del_16q23.3	0.575	1
Amp_5p12	Del_4p16.3	0.575	1
Amp_9p23	Amp_15q26.3	0.575	1
Amp_9p23	Del_2q21.2	0.575	1
FBXW7	Amp_11q13.3	0.576	1
PIK3CA	Del_Xq21.33	0.576	1
9p-Del	Amp_11p13	0.576	1
Amp_5p12	Del_19p13.3	0.576	1
Amp_6p12.1	Del_7q36.1	0.576	1
Amp_8p11.23	Amp_9p13.3	0.576	1
ADAM19	Del_9p21.3	0.577	1
CDKN2A	Del_4q35.2	0.577	1
KRT17	Del_7q36.1	0.577	1
THSD7A	Amp_12p13.33	0.577	1
Amp_9p13.3	Del_1p36.21	0.577	1
Amp_9p13.3	Del_Xp21.3	0.577	1
Del_4p15.2	Del_Xp21.3	0.577	1
RAC1	18q-Del	0.578	1
5p-Amp	Del_9p21.3	0.578	1
10p-Del	Amp_18q11.2	0.578	1
FAT1	14q-Amp	0.579	1
KDM6A	Amp_9p24.1	0.579	1
RASA1	Amp_9p24.1	0.579	1
ASXL1	Del_9p21.3	0.58	1
CREBBP	PIK3R1	0.58	1
CREBBP	VEZF1	0.58	1
DYSF	Amp_20q11.22	0.58	1
FAT1	Amp_20q11.22	0.58	1
FBXW7	MEFV	0.58	1
HLA-A	Del_11q23.1	0.58	1
KDM6A	Amp_11q13.3	0.58	1
MEFV	7p-Amp	0.58	1
MLL4	3q-Del	0.58	1
NFE2L2	Del_11q23.1	0.58	1
OR6C65	Del_9p21.3	0.58	1
PIK3R1	7p-Amp	0.58	1
VEZF1	7p-Amp	0.58	1
VEZF1	Amp_13q22.1	0.58	1
20q-Amp	Del_3p12.1	0.58	1
Amp_20q11.22	Del_7q31.1	0.58	1
HLA-B	Del_18q23	0.581	1
KRTAP5-5	9p-Del	0.581	1
NFE2L2	Del_3p14.2	0.581	1
NSD1	Amp_2q31.2	0.581	1
SMAD4	Amp_20q11.22	0.581	1
Amp_5p15.33	Del_1p36.21	0.581	1
HLA-A	15q-Del	0.582	1
HLA-A	Amp_17q12	0.582	1
HLA-B	KIAA1267	0.582	1
HLA-B	ZNF623	0.582	1
KEAP1	15q-Del	0.582	1
KIAA1267	TGFBR2	0.582	1
OR6C65	Del_3p14.2	0.582	1
RB1	Amp_5p15.33	0.582	1
TGFBR2	ZNF623	0.582	1
ZNF623	Del_17q25.3	0.582	1
1q-Amp	Amp_8q11.21	0.582	1
9q-Amp	15q-Del	0.582	1
9q-Amp	Amp_17q12	0.582	1
Amp_8q24.21	Del_4q22.1	0.582	1
ADAM19	9p-Del	0.584	1
C3orf59	TP53	0.584	1
KIAA1267	9p-Del	0.584	1
Amp_9p24.1	Del_11q23.1	0.584	1
BRAF	Del_14q11.2	0.585	1
MAPK1	Del_14q11.2	0.585	1
NAP1L2	Amp_18q11.2	0.585	1
PIK3CA	Amp_Xq28	0.585	1
TIGD4	20p-Amp	0.585	1
ZNF233	5q-Del	0.585	1
ZNF750	Del_9p21.3	0.585	1
Amp_5p15.33	Del_1p13.2	0.585	1
ASXL1	11q-Del	0.586	1
C3orf59	3q-Amp	0.586	1
CUL3	11q-Del	0.586	1
CUL3	Del_7q36.1	0.586	1
CUL3	Del_19p13.3	0.586	1
IRS4	Del_13q12.11	0.586	1
IRS4	Del_19p13.3	0.586	1
OR6C65	Del_7q36.1	0.586	1
OR6C65	Del_19p13.3	0.586	1
PTPN14	Del_7q36.1	0.586	1
RHOA	3q-Amp	0.586	1
SMAD4	Amp_5p15.33	0.586	1
20q-Amp	4q-Del	0.586	1
8p-Del	Amp_11p13	0.586	1
Amp_5p15.33	Amp_17q12	0.586	1
C3orf59	Amp_11p13	0.587	1
DYSF	Amp_5p12	0.587	1
EMG1	Amp_5p12	0.587	1
HLA-A	Del_1p36.21	0.587	1
HLA-A	Del_4q21.3	0.587	1
KEAP1	10p-Del	0.587	1
KEAP1	Del_Xp21.3	0.587	1
MLL4	20p-Amp	0.587	1
MLL4	Amp_18q11.2	0.587	1
RHOA	Amp_11p13	0.587	1
THSD7A	9q-Amp	0.587	1
9q-Amp	Del_Xp21.3	0.587	1
21q-Del	Del_2q22.1	0.587	1
Amp_2q11.2	Amp_5p12	0.587	1
Amp_9p23	Del_2q22.1	0.587	1
CASP8	KEAP1	0.588	1
DYSF	Del_Xq21.33	0.588	1
NLRP8	PIK3CA	0.588	1
NLRP8	3p-Del	0.588	1
PIK3CA	9q-Del	0.588	1
PIK3CA	Amp_15q26.3	0.588	1
20q-Amp	9q-Del	0.588	1
20q-Amp	Xp-Del	0.588	1
MLL4	Amp_3q26.33	0.589	1
NOTCH1	Amp_8q24.21	0.589	1
DYSF	Amp_2q31.2	0.59	1
DYSF	Amp_11q13.3	0.59	1
HUWE1	Del_1p13.2	0.59	1
HUWE1	Del_2q36.2	0.59	1
MEFV	10p-Del	0.59	1
MEFV	Del_Xp21.3	0.59	1
PIK3R1	THSD7A	0.59	1
PIK3R1	10p-Del	0.59	1
PIK3R1	Del_1p36.21	0.59	1
PIK3R1	Del_Xp21.3	0.59	1
VEZF1	10p-Del	0.59	1
12p-Amp	11p-Del	0.59	1
12p-Amp	Del_9q21.11	0.59	1
14q-Amp	11p-Del	0.59	1
14q-Amp	Del_6p25.3	0.59	1
Amp_2q31.2	Del_7q31.1	0.59	1
Amp_6q12	Amp_11q13.3	0.59	1
Amp_12q15	Del_14q32.32	0.59	1
CDKN2A	MLL4	0.591	1
GAGE2A	5p-Amp	0.591	1
TGFBR2	Del_4p16.3	0.591	1
TGFBR2	Del_4q35.2	0.591	1
7p-Amp	9p-Del	0.591	1
Amp_7p11.2	Del_1q44	0.591	1
Amp_7p11.2	Del_Xp21.3	0.591	1
KRT17	Amp_9p24.1	0.592	1
MLL4	NSD1	0.592	1
THSD7A	18q-Del	0.592	1
3q-Amp	Amp_18q11.2	0.592	1
ASXL1	CUL3	0.593	1
ASXL1	1q-Amp	0.593	1
CUL3	IRS4	0.593	1
CUL3	OR6C65	0.593	1
CUL3	PTPN14	0.593	1
IRS4	OR6C65	0.593	1
IRS4	PTPN14	0.593	1
IRS4	1q-Amp	0.593	1
KDM6A	Del_4p16.3	0.593	1
KDM6A	Del_13q14.2	0.593	1
OR6C65	PTPN14	0.593	1
OR6C65	1q-Amp	0.593	1
PTPN14	1q-Amp	0.593	1
RHOA	Amp_18p11.31	0.593	1
TGFBR2	Del_3p24.1	0.593	1
5p-Amp	Amp_7p11.2	0.593	1
Amp_7p11.2	Amp_11p13	0.593	1
Amp_8q11.21	Del_7q36.1	0.593	1
Del_3p24.1	Del_17q25.3	0.593	1
20p-Amp	11q-Del	0.594	1
20p-Amp	Del_7q36.1	0.594	1
CDKN2A	Del_1p36.21	0.595	1
CDKN2A	Del_Xp21.3	0.595	1
EMG1	MLL2	0.595	1
FBXW7	Amp_2q31.2	0.595	1
7q-Amp	9p-Del	0.595	1
Amp_2q31.2	Amp_13q22.1	0.595	1
Del_2q22.1	Del_5q12.1	0.595	1
BRAF	12p-Amp	0.596	1
BRAF	14q-Amp	0.596	1
HRAS	3q-Amp	0.596	1
MAPK1	12p-Amp	0.596	1
MAPK1	14q-Amp	0.596	1
NUDT11	14q-Amp	0.596	1
20q-Amp	3p-Del	0.596	1
Del_2q22.1	Del_Xq21.33	0.596	1
EPHA2	8p-Amp	0.597	1
GAGE2A	NSD1	0.597	1
JUB	Del_8p23.2	0.597	1
PTEN	Amp_5p12	0.597	1
SMAD4	ZNF750	0.597	1
ZNF750	15q-Del	0.597	1
Amp_12q15	Del_10p15.3	0.597	1
EPHA2	Del_8p23.2	0.598	1
NAP1L2	Del_11q23.1	0.598	1
NLRP8	RAC1	0.598	1
NOTCH1	Del_4p16.3	0.598	1
PIK3CA	Amp_5p12	0.598	1
PTEN	7q-Amp	0.598	1
PTEN	Del_2q21.2	0.598	1
RAC1	7q-Amp	0.598	1
RAC1	9q-Del	0.598	1
RAC1	Xp-Del	0.598	1
RAC1	Amp_15q26.3	0.598	1
RAC1	Del_2q21.2	0.598	1
ZNF233	Amp_5p15.33	0.598	1
7q-Amp	3q-Del	0.598	1
Amp_8q11.21	Del_6p25.3	0.598	1
Amp_8q24.21	Del_7q31.1	0.598	1
C3orf59	11p-Del	0.599	1
C3orf59	Amp_12q15	0.599	1
C3orf59	Del_6p25.3	0.599	1
C3orf59	Del_9q21.11	0.599	1
EPHA2	PIK3CA	0.599	1
FGFR3	Amp_12q15	0.599	1
FGFR3	Del_9q21.11	0.599	1
PIK3R1	8q-Amp	0.599	1
RAC1	Amp_7q21.3	0.599	1
RHOA	11p-Del	0.599	1
RHOA	Amp_12q15	0.599	1
RHOA	Del_6p25.3	0.599	1
ADAM19	5p-Amp	0.6	1
KIAA1267	5p-Amp	0.6	1
MEFV	21q-Del	0.6	1
PIK3R1	21q-Del	0.6	1
THSD7A	TP53	0.6	1
Amp_8q24.21	Amp_9p13.3	0.6	1
C3orf59	Del_4p16.3	0.601	1
CASP8	8q-Amp	0.601	1
EP300	NLRP8	0.601	1
EP300	9q-Del	0.601	1
EP300	Xp-Del	0.601	1
NLRP8	Del_10q23.31	0.601	1
NLRP8	Del_11p15.5	0.601	1
RHOA	Del_4q35.2	0.601	1
5p-Amp	Amp_11p13	0.601	1
7q-Amp	Del_10q23.31	0.601	1
Amp_8p11.23	Del_5q12.1	0.601	1
Del_2q21.2	Del_11p15.5	0.601	1
KRTAP5-5	Amp_8p11.23	0.602	1
MLL4	Amp_8p11.23	0.602	1
DYSF	Del_5q35.3	0.603	1
HLA-A	21q-Del	0.603	1
KDM6A	Del_4p15.2	0.603	1
KEAP1	21q-Del	0.603	1
RASA1	Del_4p15.2	0.603	1
TGFBR2	Del_4p15.2	0.603	1
TGFBR2	Del_5q12.1	0.603	1
TIGD4	Amp_2q31.2	0.603	1
8p-Amp	Del_10q23.31	0.603	1
Amp_9p24.1	Amp_11q13.3	0.603	1
DYSF	Del_Xp22.2	0.604	1
HLA-A	Del_13q12.11	0.604	1
IRS4	Del_3p12.1	0.604	1
JUB	Amp_2q11.2	0.604	1
JUB	Amp_13q34	0.604	1
JUB	Del_7q31.1	0.604	1
KIAA1267	Amp_8q11.21	0.604	1
MLL2	Del_1p36.21	0.604	1
MLL4	Del_Xq21.33	0.604	1
OR6C65	Del_3p12.1	0.604	1
PTPN14	Del_3p12.1	0.604	1
ZNF623	Amp_8q11.21	0.604	1
Amp_6q12	Del_3p24.1	0.604	1
Del_7q31.1	Del_Xp22.2	0.604	1
RAC1	Amp_7p11.2	0.605	1
Amp_2q31.2	Del_13q12.11	0.606	1
Amp_9p13.3	Del_Xq21.33	0.606	1
BRAF	NFE2L2	0.607	1
JUB	NSD1	0.607	1
MLL2	Amp_6q12	0.607	1
MLL2	Amp_13q34	0.607	1
NFE2L2	NUDT11	0.607	1
NSD1	Amp_Xq28	0.607	1
NUDT11	Amp_6p12.1	0.607	1
Amp_6p12.1	Del_16q23.1	0.607	1
JUB	Del_2q36.2	0.608	1
KRT17	Amp_9p23	0.608	1
PIK3CA	14q-Amp	0.608	1
SMAD4	4p-Del	0.608	1
4p-Del	Amp_17q12	0.608	1
Amp_8q11.21	Del_2q22.1	0.608	1
C3orf59	Del_4p15.2	0.609	1
C3orf59	Del_5q15	0.609	1
FGFR3	Del_5q12.1	0.609	1
FGFR3	Del_5q15	0.609	1
HUWE1	Del_4q22.1	0.609	1
KIAA1267	NSD1	0.609	1
Amp_9p24.1	Del_3p12.1	0.609	1
Amp_9p24.1	Del_10q23.31	0.609	1
ADAM19	KEAP1	0.61	1
ADAM19	9q-Amp	0.61	1
ASXL1	Del_16q23.1	0.61	1
CUL3	Amp_9p24.1	0.61	1
HLA-B	12p-Amp	0.61	1
HLA-B	Del_1p13.2	0.61	1
HLA-B	Del_14q32.32	0.61	1
HRAS	PIK3R1	0.61	1
HRAS	VEZF1	0.61	1
KEAP1	KIAA1267	0.61	1
KIAA1267	9q-Amp	0.61	1
KIAA1267	Amp_3q26.33	0.61	1
NFE2L2	Del_3p12.1	0.61	1
OR6C65	Amp_9p24.1	0.61	1
PIK3R1	8p-Amp	0.61	1
PTPN14	Amp_9p24.1	0.61	1
TGFBR2	Del_1p13.2	0.61	1
ZNF623	9q-Amp	0.61	1
ZNF750	Del_4q21.3	0.61	1
ZNF750	Del_Xp21.3	0.61	1
14q-Amp	Del_17q25.3	0.61	1
C3orf59	Del_17q25.3	0.612	1
DYSF	SMAD4	0.612	1
FGFR3	Del_17q25.3	0.612	1
HLA-B	RHOA	0.612	1
JUB	TIGD4	0.612	1
RHOA	TGFBR2	0.612	1
RHOA	Del_17q25.3	0.612	1
SMAD4	Amp_2q11.2	0.612	1
SMAD4	Amp_6q12	0.612	1
SMAD4	Amp_13q34	0.612	1
SMAD4	Del_7q31.1	0.612	1
ZNF750	Del_3p26.2	0.612	1
15q-Del	Amp_2q11.2	0.612	1
15q-Del	Amp_6q12	0.612	1
15q-Del	Amp_13q34	0.612	1
Amp_8q11.21	Del_Xp22.2	0.612	1
Amp_17q12	Del_7q31.1	0.612	1
CREBBP	Del_Xp22.2	0.613	1
FBXW7	JUB	0.613	1
MLL2	PTEN	0.613	1
MLL2	RAC1	0.613	1
MLL2	Del_13q14.2	0.613	1
MLL4	Amp_20q11.22	0.613	1
7p-Amp	Amp_Xq28	0.613	1
13q-Del	Amp_Xq28	0.613	1
3p-Del	Amp_8q11.21	0.613	1
Amp_13q22.1	Amp_Xq28	0.613	1
Amp_13q22.1	Del_Xp22.2	0.613	1
IRS4	3q-Amp	0.614	1
NLRP8	20p-Amp	0.614	1
NLRP8	Amp_18q11.2	0.614	1
20p-Amp	9q-Del	0.614	1
4p-Del	Amp_13q34	0.614	1
Amp_7q21.3	Amp_9p24.1	0.614	1
Amp_7q21.3	Del_16q23.1	0.614	1
Amp_18q11.2	Del_2q21.2	0.614	1
KDM6A	PTEN	0.615	1
KDM6A	RAC1	0.615	1
KDM6A	3q-Del	0.615	1
MLL4	Amp_2q31.2	0.615	1
RAC1	RASA1	0.615	1
RASA1	3q-Del	0.615	1
Amp_5p15.33	Del_10p15.3	0.615	1
KDM6A	20q-Amp	0.616	1
KRT17	Del_18q23	0.616	1
ADAM19	Amp_8p11.23	0.617	1
KIAA1267	Amp_8p11.23	0.617	1
Amp_5p12	Del_9q21.11	0.617	1
C3orf59	CDKN2A	0.618	1
CDKN2A	RHOA	0.618	1
FAT1	FGFR3	0.618	1
GAGE2A	Del_5q35.3	0.618	1
KRTAP5-5	Del_5q35.3	0.618	1
MAPK1	Del_13q12.11	0.618	1
MLL4	Del_3p14.2	0.618	1
MLL4	Del_8p23.2	0.618	1
PIK3CA	13q-Del	0.618	1
THSD7A	9p-Del	0.618	1
CREBBP	5p-Amp	0.619	1
CREBBP	Amp_13q34	0.619	1
FBXW7	5p-Amp	0.619	1
FBXW7	Amp_6q12	0.619	1
HLA-A	4q-Del	0.619	1
HRAS	KEAP1	0.619	1
HUWE1	4p-Del	0.619	1
KEAP1	4q-Del	0.619	1
NUDT11	Amp_11p13	0.619	1
13q-Del	Amp_6q12	0.619	1
13q-Del	Amp_13q34	0.619	1
Amp_2q11.2	Amp_13q22.1	0.619	1
Amp_5p15.33	Amp_11p13	0.619	1
Amp_8p11.23	Amp_9p24.1	0.619	1
NLRP8	Del_Xq21.33	0.62	1
NOTCH1	Del_21q22.3	0.62	1
PTEN	Del_2q36.2	0.62	1
RAC1	Del_2q36.2	0.62	1
7q-Amp	Del_Xq21.33	0.62	1
3p-Del	Amp_7p11.2	0.62	1
5q-Del	Amp_7p11.2	0.62	1
9q-Del	Del_Xq21.33	0.62	1
Xp-Del	Del_Xq21.33	0.62	1
CREBBP	NAP1L2	0.621	1
CREBBP	ZNF233	0.621	1
FBXW7	NAP1L2	0.621	1
FBXW7	TIGD4	0.621	1
FBXW7	ZNF233	0.621	1
MEFV	Del_14q11.2	0.621	1
NAP1L2	7p-Amp	0.621	1
NAP1L2	13q-Del	0.621	1
NAP1L2	Amp_13q22.1	0.621	1
PIK3R1	Del_14q11.2	0.621	1
TIGD4	7p-Amp	0.621	1
TIGD4	13q-Del	0.621	1
TIGD4	Amp_13q22.1	0.621	1
VEZF1	Del_14q11.2	0.621	1
ZNF233	13q-Del	0.621	1
ZNF233	Amp_13q22.1	0.621	1
18q-Del	Amp_9p23	0.621	1
Del_4q35.2	Del_19p13.3	0.621	1
8p-Amp	Del_4p16.3	0.622	1
8p-Amp	Del_4q35.2	0.622	1
Del_9p21.3	Del_Xq21.33	0.622	1
8q-Amp	Del_8p23.2	0.623	1
10p-Del	Amp_11q13.3	0.623	1
21q-Del	Amp_7p11.2	0.623	1
Amp_11q13.3	Del_1p36.21	0.623	1
Amp_11q13.3	Del_4q21.3	0.623	1
EP300	KRT17	0.624	1
KIAA1267	ZNF750	0.624	1
KRT17	Del_11p15.5	0.624	1
KRTAP5-5	4p-Del	0.624	1
MEFV	Amp_7p11.2	0.624	1
TGFBR2	Del_10p15.3	0.624	1
VEZF1	Amp_7p11.2	0.624	1
ZNF623	ZNF750	0.624	1
Del_10p15.3	Del_17q25.3	0.624	1
ADAM19	Amp_20q11.22	0.625	1
EMG1	Del_13q12.11	0.625	1
JUB	Del_10p15.3	0.625	1
Amp_20q11.22	Del_8p23.2	0.625	1
9q-Amp	Del_10p11.21	0.626	1
11q-Del	Amp_12q15	0.626	1
Amp_12q15	Del_7q36.1	0.626	1
EP300	PIK3CA	0.627	1
HRAS	Amp_9p13.3	0.627	1
20q-Amp	Amp_9p13.3	0.627	1
20q-Amp	Amp_12p13.33	0.627	1
4q-Del	Amp_9p13.3	0.627	1
Amp_11p13	Amp_12q15	0.627	1
Amp_11p13	Del_9q21.11	0.627	1
HUWE1	Del_21q22.3	0.628	1
MLL4	SMAD4	0.628	1
MLL4	Amp_17q12	0.628	1
NFE2L2	Del_17q25.3	0.628	1
8q-Amp	Amp_2q31.2	0.628	1
Amp_11p13	Del_3p14.2	0.628	1
Amp_11p13	Del_8p23.2	0.628	1
CDKN2A	3q-Del	0.629	1
EP300	KDM6A	0.629	1
MLL4	Del_Xp22.2	0.629	1
PIK3CA	15q-Del	0.629	1
PIK3CA	Amp_17q12	0.629	1
RB1	Del_11p15.5	0.629	1
SMAD4	3p-Del	0.629	1
Amp_6p12.1	Del_3p24.1	0.629	1
Amp_18p11.31	Del_10p11.21	0.629	1
IRS4	Del_11q23.1	0.63	1
MLL2	PIK3R1	0.63	1
PTPN14	Del_11q23.1	0.63	1
RHOA	Del_18q23	0.63	1
ZNF750	Amp_9p13.3	0.63	1
Amp_11p13	Del_16q23.1	0.63	1
BRAF	11p-Del	0.631	1
BRAF	Amp_12q15	0.631	1
BRAF	Del_6p25.3	0.631	1
BRAF	Del_9q21.11	0.631	1
CREBBP	Del_2q36.2	0.631	1
EPHA2	14q-Amp	0.631	1
FBXW7	Del_2q36.2	0.631	1
MAPK1	11p-Del	0.631	1
MAPK1	Amp_12q15	0.631	1
MAPK1	Del_9q21.11	0.631	1
NAP1L2	THSD7A	0.631	1
NAP1L2	Del_4q21.3	0.631	1
NAP1L2	Del_Xp21.3	0.631	1
NUDT11	Amp_12q15	0.631	1
NUDT11	Del_9q21.11	0.631	1
THSD7A	ZNF233	0.631	1
TIGD4	Del_4q21.3	0.631	1
ZNF233	Del_4q21.3	0.631	1
12p-Amp	20q-Amp	0.631	1
14q-Amp	20q-Amp	0.631	1
3q-Amp	Amp_11q13.3	0.631	1
ASXL1	Del_13q14.2	0.632	1
FBXW7	13q-Del	0.632	1
IRS4	Del_4q35.2	0.632	1
KRT17	5q-Del	0.632	1
KRT17	Amp_18q11.2	0.632	1
MEFV	12p-Amp	0.632	1
MLL2	Amp_7q21.3	0.632	1
NAP1L2	3p-Del	0.632	1
PIK3CA	TIGD4	0.632	1
PIK3CA	ZNF233	0.632	1
PIK3R1	12p-Amp	0.632	1
PIK3R1	14q-Amp	0.632	1
PIK3R1	Del_14q32.32	0.632	1
RB1	9p-Del	0.632	1
VEZF1	12p-Amp	0.632	1
VEZF1	14q-Amp	0.632	1
VEZF1	Del_14q32.32	0.632	1
13q-Del	Amp_13q22.1	0.632	1
ASXL1	3q-Del	0.633	1
CUL3	PTEN	0.633	1
EP300	Del_2q22.1	0.633	1
FAT1	21q-Del	0.633	1
FBXW7	NSD1	0.633	1
IRS4	PTEN	0.633	1
NOTCH1	NSD1	0.633	1
OR6C65	Amp_9p23	0.633	1
PTPN14	Amp_9p23	0.633	1
RAC1	1q-Amp	0.633	1
RASA1	3p-Del	0.633	1
10p-Del	Del_Xp22.2	0.633	1
3p-Del	Amp_20q11.22	0.633	1
Amp_Xq28	Del_1p36.21	0.633	1
Amp_Xq28	Del_4q21.3	0.633	1
Del_1p36.21	Del_Xp22.2	0.633	1
DYSF	THSD7A	0.634	1
DYSF	Del_4q21.3	0.634	1
DYSF	Del_Xp21.3	0.634	1
THSD7A	Amp_6q12	0.634	1
THSD7A	Amp_13q34	0.634	1
THSD7A	Del_7q31.1	0.634	1
8p-Amp	Del_4p15.2	0.634	1
10p-Del	Amp_6q12	0.634	1
Amp_3q26.33	Amp_7p11.2	0.634	1
Amp_13q34	Del_4q21.3	0.634	1
Amp_13q34	Del_Xp21.3	0.634	1
Del_7q31.1	Del_Xp21.3	0.634	1
MLL2	Del_5q15	0.635	1
Amp_7q21.3	Del_Xq21.33	0.635	1
Amp_8q11.21	Del_10q23.31	0.635	1
Amp_9p24.1	Amp_20q11.22	0.635	1
CASP8	15q-Del	0.636	1
CASP8	Amp_17q12	0.636	1
NAP1L2	Amp_11q13.3	0.636	1
TIGD4	Amp_11q13.3	0.636	1
ZNF233	Amp_11q13.3	0.636	1
11q-Del	Amp_2q31.2	0.636	1
Amp_2q31.2	Del_7q36.1	0.636	1
C3orf59	Amp_11q13.3	0.637	1
CDKN2A	Del_5q35.3	0.637	1
EPHA2	Del_2q36.2	0.637	1
KDM6A	Del_Xq21.33	0.637	1
RASA1	Del_Xq21.33	0.637	1
RB1	Del_Xq21.33	0.637	1
RHOA	Amp_11q13.3	0.637	1
TGFBR2	Del_21q22.3	0.637	1
Amp_6p12.1	Del_16q23.3	0.637	1
ADAM19	Amp_2q11.2	0.638	1
ADAM19	Amp_6q12	0.638	1
ADAM19	Amp_13q34	0.638	1
ADAM19	Del_7q31.1	0.638	1
C3orf59	KEAP1	0.638	1
C3orf59	9q-Amp	0.638	1
DYSF	KIAA1267	0.638	1
FGFR3	HLA-A	0.638	1
FGFR3	KEAP1	0.638	1
HLA-B	9p-Del	0.638	1
KIAA1267	Amp_2q11.2	0.638	1
KIAA1267	Amp_6q12	0.638	1
KIAA1267	Amp_13q34	0.638	1
KIAA1267	Del_7q31.1	0.638	1
RHOA	9q-Amp	0.638	1
ZNF623	Amp_2q11.2	0.638	1
ZNF623	Amp_6q12	0.638	1
ZNF623	Amp_13q34	0.638	1
ZNF623	Del_7q31.1	0.638	1
9q-Amp	3p-Del	0.638	1
9q-Amp	Amp_7q21.3	0.638	1
BRAF	3q-Amp	0.639	1
EMG1	3q-Amp	0.639	1
FBXW7	Del_8p23.2	0.639	1
MAPK1	3q-Amp	0.639	1
MLL2	Amp_12q15	0.639	1
MLL2	Del_9q21.11	0.639	1
3q-Amp	Del_1q44	0.639	1
Amp_8q24.21	Del_4p15.2	0.639	1
NFE2L2	Del_18q23	0.64	1
ZNF233	21q-Del	0.64	1
CASP8	GAGE2A	0.641	1
CASP8	KRTAP5-5	0.641	1
FAT1	NLRP8	0.641	1
FAT1	7q-Amp	0.641	1
FAT1	Xp-Del	0.641	1
FAT1	Del_2q21.2	0.641	1
GAGE2A	Del_2q22.1	0.641	1
HUWE1	JUB	0.641	1
HUWE1	RAC1	0.641	1
NLRP8	8q-Amp	0.641	1
RAC1	Del_21q22.3	0.641	1
TIGD4	Amp_8q24.21	0.641	1
7q-Amp	8q-Amp	0.641	1
Amp_Xq28	Del_21q22.3	0.641	1
ASXL1	Del_5q15	0.642	1
IRS4	Del_4p15.2	0.642	1
IRS4	Del_5q12.1	0.642	1
IRS4	Del_5q15	0.642	1
KDM6A	20p-Amp	0.642	1
KDM6A	Amp_18q11.2	0.642	1
MEFV	NFE2L2	0.642	1
MEFV	Amp_6p12.1	0.642	1
NFE2L2	PIK3R1	0.642	1
NOTCH1	Del_8p23.2	0.642	1
OR6C65	Del_4p15.2	0.642	1
OR6C65	Del_5q15	0.642	1
PIK3R1	Amp_6p12.1	0.642	1
PTPN14	Del_4p15.2	0.642	1
RASA1	Amp_18q11.2	0.642	1
BRAF	TGFBR2	0.643	1
EMG1	Amp_18p11.31	0.643	1
GAGE2A	Amp_11q13.3	0.643	1
HLA-B	NUDT11	0.643	1
MAPK1	TGFBR2	0.643	1
20q-Amp	18q-Del	0.643	1
Amp_18p11.31	Del_1q44	0.643	1
MLL4	7p-Amp	0.644	1
MLL4	13q-Del	0.644	1
NLRP8	15q-Del	0.644	1
PIK3CA	Amp_6p12.1	0.644	1
SMAD4	7q-Amp	0.644	1
SMAD4	9q-Del	0.644	1
SMAD4	Xp-Del	0.644	1
SMAD4	Amp_15q26.3	0.644	1
SMAD4	Del_2q21.2	0.644	1
TIGD4	TP53	0.644	1
TP53	ZNF233	0.644	1
ZNF623	Del_11q23.1	0.644	1
7q-Amp	15q-Del	0.644	1
15q-Del	9q-Del	0.644	1
15q-Del	Amp_15q26.3	0.644	1
9q-Del	Amp_17q12	0.644	1
Xp-Del	Amp_17q12	0.644	1
Amp_17q12	Del_2q21.2	0.644	1
SMAD4	Amp_9p13.3	0.645	1
5p-Amp	Del_1p36.21	0.645	1
5p-Amp	Del_Xp21.3	0.645	1
15q-Del	Amp_9p13.3	0.645	1
Amp_9p13.3	Amp_17q12	0.645	1
Amp_12q15	Del_6p25.3	0.645	1
EP300	Del_16q23.3	0.646	1
HLA-B	Amp_11p13	0.646	1
KRT17	Amp_8q11.21	0.646	1
MAPK1	Amp_18p11.31	0.646	1
MLL4	4p-Del	0.646	1
3q-Amp	Amp_2q31.2	0.646	1
Amp_9p23	Del_11q23.1	0.646	1
Amp_11p13	Del_17q25.3	0.646	1
EMG1	Del_4p16.3	0.647	1
EMG1	Del_4q35.2	0.647	1
EMG1	Del_13q14.2	0.647	1
EP300	12p-Amp	0.647	1
EP300	Del_14q32.32	0.647	1
FBXW7	Amp_8q11.21	0.647	1
GAGE2A	Amp_8q24.21	0.647	1
GAGE2A	Amp_9p13.3	0.647	1
KRTAP5-5	Amp_8q24.21	0.647	1
KRTAP5-5	Amp_12p13.33	0.647	1
RHOA	5p-Amp	0.647	1
TP53	Del_7q36.1	0.647	1
14q-Amp	Del_10q23.31	0.647	1
7p-Amp	Del_4q22.1	0.647	1
13q-Del	Amp_8p11.23	0.647	1
Amp_13q22.1	Del_10p15.3	0.647	1
Amp_15q26.3	Amp_20q11.22	0.647	1
Del_1q44	Del_4q35.2	0.647	1
Del_1q44	Del_13q14.2	0.647	1
EPHA2	NFE2L2	0.648	1
KRT17	Amp_2q31.2	0.648	1
NAP1L2	NOTCH1	0.648	1
NOTCH1	TIGD4	0.648	1
NOTCH1	ZNF233	0.648	1
3q-Amp	Amp_18p11.31	0.648	1
9q-Amp	Del_8p23.2	0.648	1
Amp_8p11.23	Del_3p26.2	0.648	1
Amp_8q24.21	Del_11p15.5	0.648	1
Amp_12p13.33	Del_1p13.2	0.648	1
CASP8	DYSF	0.649	1
DYSF	21q-Del	0.649	1
DYSF	Del_2q22.1	0.649	1
Amp_9p24.1	Del_1p13.2	0.649	1
Amp_13q34	Del_2q22.1	0.649	1
Del_2q22.1	Del_7q31.1	0.649	1
HRAS	NAP1L2	0.65	1
HRAS	TIGD4	0.65	1
NAP1L2	8p-Amp	0.65	1
NAP1L2	4q-Del	0.65	1
NFE2L2	4p-Del	0.65	1
NSD1	Del_16q23.3	0.65	1
PIK3CA	8q-Amp	0.65	1
ZNF233	8p-Amp	0.65	1
ZNF233	4q-Del	0.65	1
8q-Amp	3p-Del	0.65	1
4p-Del	Amp_12p13.33	0.65	1
ADAM19	4p-Del	0.651	1
ASXL1	Amp_8q24.21	0.651	1
C3orf59	ZNF750	0.651	1
CDKN2A	HLA-A	0.651	1
CREBBP	THSD7A	0.651	1
CREBBP	10p-Del	0.651	1
CREBBP	Del_4q21.3	0.651	1
FBXW7	Del_Xp21.3	0.651	1
HLA-B	Del_7q36.1	0.651	1
KIAA1267	4p-Del	0.651	1
NOTCH1	15q-Del	0.651	1
RAC1	11q-Del	0.651	1
RAC1	Del_7q36.1	0.651	1
RAC1	Del_19p13.3	0.651	1
ZNF623	4p-Del	0.651	1
7p-Amp	10p-Del	0.651	1
EMG1	Del_4p15.2	0.652	1
HLA-A	Del_14q32.32	0.652	1
KDM6A	5p-Amp	0.652	1
21q-Del	Del_Xp22.2	0.652	1
Del_1q44	Del_5q12.1	0.652	1
Del_1q44	Del_5q15	0.652	1
BRAF	Del_4p16.3	0.653	1
BRAF	Del_13q14.2	0.653	1
MAPK1	Del_4p16.3	0.653	1
MAPK1	Del_4q35.2	0.653	1
MEFV	Amp_11p13	0.653	1
MLL4	ZNF623	0.653	1
NFE2L2	20q-Amp	0.653	1
NUDT11	Del_13q14.2	0.653	1
Amp_5p12	Del_17q25.3	0.653	1
Del_1p13.2	Del_Xp21.3	0.654	1
Del_2q22.1	Del_18q23	0.654	1
ASXL1	Del_Xq21.33	0.655	1
C3orf59	NSD1	0.655	1
CUL3	Del_Xq21.33	0.655	1
EPHA2	NUDT11	0.655	1
IRS4	Del_Xq21.33	0.655	1
JUB	7q-Amp	0.655	1
JUB	Del_2q21.2	0.655	1
NLRP8	Amp_Xq28	0.655	1
PTPN14	Del_Xq21.33	0.655	1
TGFBR2	Del_3p26.2	0.655	1
1q-Amp	Del_Xq21.33	0.655	1
7q-Amp	Amp_Xq28	0.655	1
9q-Del	Amp_Xq28	0.655	1
Amp_9p24.1	Amp_12q15	0.655	1
Amp_9p24.1	Amp_18p11.31	0.655	1
Amp_9p24.1	Del_6p25.3	0.655	1
Amp_9p24.1	Del_9q21.11	0.655	1
Amp_11p13	Del_3p12.1	0.655	1
Amp_15q26.3	Del_Xp22.2	0.655	1
Amp_Xq28	Del_2q21.2	0.655	1
Del_1p13.2	Del_Xq21.33	0.655	1
Del_2q36.2	Del_Xq21.33	0.655	1
Del_3p26.2	Del_17q25.3	0.655	1
ADAM19	TP53	0.656	1
CDKN2A	Amp_9p13.3	0.656	1
FAT1	20q-Amp	0.656	1
NLRP8	Del_18q23	0.656	1
Amp_3q26.33	Del_Xq21.33	0.656	1
Amp_8p11.23	Del_9q21.11	0.656	1
Del_2q21.2	Del_18q23	0.656	1
JUB	KRT17	0.657	1
JUB	11q-Del	0.657	1
KRT17	Amp_Xq28	0.657	1
KRT17	Del_Xp22.2	0.657	1
TP53	Amp_11p13	0.657	1
20p-Amp	Del_3p12.1	0.657	1
Amp_7q21.3	Amp_20q11.22	0.657	1
ASXL1	Del_10q23.31	0.658	1
CUL3	Del_11p15.5	0.658	1
GAGE2A	Del_10p11.21	0.658	1
IRS4	Del_10q23.31	0.658	1
JUB	8q-Amp	0.658	1
KDM6A	NOTCH1	0.658	1
KEAP1	Del_4q35.2	0.658	1
KRTAP5-5	Del_10p11.21	0.658	1
MEFV	Amp_3q26.33	0.658	1
MLL4	Del_Xp21.3	0.658	1
OR6C65	Del_11p15.5	0.658	1
VEZF1	Amp_3q26.33	0.658	1
NAP1L2	Del_14q11.2	0.659	1
NSD1	Del_4q21.3	0.659	1
NSD1	Del_Xp21.3	0.659	1
TIGD4	Del_14q11.2	0.659	1
BRAF	Del_4p15.2	0.66	1
DYSF	Amp_12p13.33	0.66	1
KDM6A	SMAD4	0.66	1
KDM6A	Amp_17q12	0.66	1
MAPK1	Del_4p15.2	0.66	1
MAPK1	Del_5q12.1	0.66	1
MAPK1	Del_5q15	0.66	1
MLL2	Del_Xq21.33	0.66	1
NLRP8	Amp_3q26.33	0.66	1
NUDT11	Del_5q12.1	0.66	1
NUDT11	Del_5q15	0.66	1
RASA1	15q-Del	0.66	1
RB1	SMAD4	0.66	1
RB1	Amp_17q12	0.66	1
Amp_11p13	Del_16q23.3	0.66	1
Amp_20q11.22	Del_13q12.11	0.66	1
CDKN2A	Amp_11p13	0.661	1
FBXW7	Amp_20q11.22	0.661	1
5p-Amp	Del_17q25.3	0.661	1
13q-Del	Amp_20q11.22	0.661	1
Amp_8q11.21	Del_14q32.32	0.661	1
HLA-A	Amp_8q24.21	0.662	1
Amp_7p11.2	Amp_20q11.22	0.662	1
C3orf59	Amp_8p11.23	0.663	1
FBXW7	8p-Del	0.663	1
FBXW7	Del_21q22.3	0.663	1
FGFR3	Amp_8p11.23	0.663	1
PIK3CA	Amp_9p24.1	0.663	1
SMAD4	Del_10p11.21	0.663	1
14q-Amp	5q-Del	0.663	1
13q-Del	8p-Del	0.663	1
15q-Del	Del_10p11.21	0.663	1
5q-Del	Del_14q32.32	0.663	1
Del_2q22.1	Del_14q32.32	0.663	1
DYSF	HRAS	0.664	1
HLA-B	Amp_12q15	0.664	1
HLA-B	Del_9q21.11	0.664	1
KEAP1	Del_1p13.2	0.664	1
KEAP1	Del_2q36.2	0.664	1
KRTAP5-5	Amp_7q21.3	0.664	1
MEFV	Amp_12q15	0.664	1
MEFV	Del_6p25.3	0.664	1
MEFV	Del_9q21.11	0.664	1
PIK3R1	Amp_12q15	0.664	1
PIK3R1	Del_6p25.3	0.664	1
TGFBR2	Del_9q21.11	0.664	1
VEZF1	11p-Del	0.664	1
VEZF1	Amp_12q15	0.664	1
VEZF1	Del_9q21.11	0.664	1
8p-Amp	Amp_2q11.2	0.664	1
8p-Amp	Del_7q31.1	0.664	1
9q-Amp	Del_2q36.2	0.664	1
4q-Del	Amp_13q34	0.664	1
C3orf59	DYSF	0.665	1
C3orf59	Amp_2q11.2	0.665	1
C3orf59	Amp_6q12	0.665	1
C3orf59	Amp_13q34	0.665	1
CREBBP	KRT17	0.665	1
DYSF	FGFR3	0.665	1
DYSF	RHOA	0.665	1
EMG1	9p-Del	0.665	1
FBXW7	KRT17	0.665	1
FGFR3	Amp_2q11.2	0.665	1
FGFR3	Amp_6q12	0.665	1
FGFR3	Amp_13q34	0.665	1
KRT17	7p-Amp	0.665	1
KRT17	Amp_13q22.1	0.665	1
NSD1	Del_1p13.2	0.665	1
RHOA	Amp_2q11.2	0.665	1
RHOA	Amp_6q12	0.665	1
RHOA	Amp_13q34	0.665	1
12p-Amp	Amp_11q13.3	0.665	1
20p-Amp	Amp_9p23	0.665	1
Amp_Xq28	Del_5q35.3	0.665	1
Del_4q22.1	Del_Xq21.33	0.665	1
Del_7q36.1	Del_19p13.3	0.665	1
Del_10p15.3	Del_Xq21.33	0.665	1
C3orf59	Amp_8q11.21	0.666	1
EPHA2	Amp_11p13	0.666	1
MLL2	8p-Amp	0.666	1
Amp_5p15.33	Amp_6q12	0.666	1
ADAM19	NLRP8	0.668	1
ADAM19	9q-Del	0.668	1
ADAM19	Xp-Del	0.668	1
ADAM19	Amp_15q26.3	0.668	1
BRAF	KEAP1	0.668	1
BRAF	9q-Amp	0.668	1
CREBBP	7q-Amp	0.668	1
FBXW7	Xp-Del	0.668	1
FBXW7	Amp_15q26.3	0.668	1
HLA-A	MAPK1	0.668	1
HLA-A	NUDT11	0.668	1
KDM6A	Amp_2q31.2	0.668	1
KEAP1	MAPK1	0.668	1
KIAA1267	NLRP8	0.668	1
KIAA1267	7q-Amp	0.668	1
KIAA1267	Xp-Del	0.668	1
NFE2L2	Del_11p15.5	0.668	1
NLRP8	13q-Del	0.668	1
NLRP8	Amp_5p12	0.668	1
RASA1	Amp_2q31.2	0.668	1
RB1	Amp_2q31.2	0.668	1
ZNF623	7q-Amp	0.668	1
ZNF623	9q-Del	0.668	1
ZNF623	Amp_15q26.3	0.668	1
7p-Amp	Del_2q21.2	0.668	1
7q-Amp	13q-Del	0.668	1
7q-Amp	Amp_13q22.1	0.668	1
9q-Amp	Del_4p15.2	0.668	1
9q-Amp	Del_5q12.1	0.668	1
13q-Del	Amp_15q26.3	0.668	1
9q-Del	Amp_5p12	0.668	1
Amp_9p13.3	Del_10p15.3	0.668	1
Amp_12p13.33	Del_10p15.3	0.668	1
Amp_13q22.1	Del_2q21.2	0.668	1
Amp_20q11.22	Del_9q21.11	0.668	1
HLA-A	Amp_6p12.1	0.669	1
IRS4	Del_3p26.2	0.669	1
KEAP1	Amp_6p12.1	0.669	1
NAP1L2	12p-Amp	0.669	1
NAP1L2	14q-Amp	0.669	1
NAP1L2	Del_14q32.32	0.669	1
OR6C65	Del_3p26.2	0.669	1
TIGD4	12p-Amp	0.669	1
TIGD4	14q-Amp	0.669	1
TIGD4	Del_14q32.32	0.669	1
ZNF233	12p-Amp	0.669	1
ZNF233	14q-Amp	0.669	1
ZNF233	Del_14q32.32	0.669	1
10p-Del	Del_Xp21.3	0.669	1
Amp_13q22.1	Del_3p12.1	0.669	1
ASXL1	9p-Del	0.67	1
ASXL1	Amp_18q11.2	0.67	1
CREBBP	21q-Del	0.67	1
IRS4	5q-Del	0.67	1
IRS4	9p-Del	0.67	1
IRS4	Amp_18q11.2	0.67	1
OR6C65	5q-Del	0.67	1
PIK3CA	Del_1p13.2	0.67	1
PTPN14	5q-Del	0.67	1
PTPN14	Amp_18q11.2	0.67	1
8p-Amp	Amp_7q21.3	0.67	1
4q-Del	Amp_7q21.3	0.67	1
Amp_2q31.2	Amp_9p24.1	0.67	1
CDKN2A	HRAS	0.671	1
FAT1	8p-Amp	0.671	1
HUWE1	Del_2q22.1	0.671	1
PTEN	RAC1	0.671	1
PTEN	3q-Del	0.671	1
RAC1	3q-Del	0.671	1
20p-Amp	Amp_9p13.3	0.671	1
20p-Amp	Amp_12p13.33	0.671	1
Del_2q22.1	Del_21q22.3	0.671	1
DYSF	18q-Del	0.672	1
MLL4	21q-Del	0.672	1
PIK3CA	Del_4p16.3	0.672	1
RASA1	Amp_8p11.23	0.672	1
RB1	Amp_8p11.23	0.672	1
THSD7A	Amp_8p11.23	0.672	1
18q-Del	Amp_2q11.2	0.672	1
18q-Del	Amp_13q34	0.672	1
4q-Del	Del_Xp22.2	0.672	1
HLA-B	NSD1	0.673	1
MLL2	Del_17q25.3	0.673	1
PTEN	Amp_9p24.1	0.673	1
PTEN	Del_16q23.1	0.673	1
RAC1	Del_16q23.1	0.673	1
ZNF750	12p-Amp	0.673	1
Amp_5p15.33	Del_19p13.3	0.673	1
EMG1	5p-Amp	0.674	1
KRT17	10p-Del	0.674	1
KRT17	Del_Xp21.3	0.674	1
PIK3R1	Del_13q12.11	0.674	1
RHOA	Del_9p21.3	0.674	1
8q-Amp	Del_5q15	0.674	1
DYSF	Del_13q12.11	0.675	1
FAT1	Del_1p13.2	0.675	1
HLA-B	MEFV	0.675	1
HLA-B	PIK3R1	0.675	1
HLA-B	VEZF1	0.675	1
KRT17	Amp_5p15.33	0.675	1
KRT17	Del_11q23.1	0.675	1
MEFV	TGFBR2	0.675	1
MEFV	Del_17q25.3	0.675	1
TGFBR2	VEZF1	0.675	1
VEZF1	Del_17q25.3	0.675	1
3q-Amp	Del_18q23	0.675	1
8p-Del	Del_Xq21.33	0.675	1
Amp_2q11.2	Del_13q12.11	0.675	1
Amp_6q12	Del_13q12.11	0.675	1
Amp_12q15	Del_3p14.2	0.675	1
EPHA2	11q-Del	0.676	1
EPHA2	Del_19p13.3	0.676	1
GAGE2A	Del_1p13.2	0.676	1
HLA-A	Del_4q22.1	0.676	1
HLA-A	Del_10p15.3	0.676	1
KRTAP5-5	Del_1p13.2	0.676	1
KRTAP5-5	Del_2q36.2	0.676	1
ADAM19	Del_3p14.2	0.677	1
ADAM19	Del_8p23.2	0.677	1
ASXL1	SMAD4	0.677	1
CUL3	SMAD4	0.677	1
CUL3	15q-Del	0.677	1
IRS4	SMAD4	0.677	1
IRS4	15q-Del	0.677	1
IRS4	Amp_17q12	0.677	1
NLRP8	Amp_7p11.2	0.677	1
OR6C65	SMAD4	0.677	1
OR6C65	15q-Del	0.677	1
OR6C65	Amp_17q12	0.677	1
PTPN14	15q-Del	0.677	1
SMAD4	1q-Amp	0.677	1
1q-Amp	15q-Del	0.677	1
1q-Amp	Amp_17q12	0.677	1
20p-Amp	Del_9p21.3	0.677	1
Xp-Del	Amp_7p11.2	0.677	1
Amp_7p11.2	Del_2q21.2	0.677	1
Amp_12p13.33	Del_14q32.32	0.677	1
ASXL1	PIK3CA	0.678	1
IRS4	PIK3CA	0.678	1
NOTCH1	Amp_7p11.2	0.678	1
PIK3CA	ZNF750	0.678	1
PIK3CA	1q-Amp	0.678	1
PTPN14	3p-Del	0.678	1
8q-Amp	Amp_3q26.33	0.678	1
Amp_13q22.1	Del_7q36.1	0.678	1
EMG1	NSD1	0.679	1
FGFR3	MLL4	0.679	1
NAP1L2	NFE2L2	0.679	1
NAP1L2	Amp_6p12.1	0.679	1
NFE2L2	ZNF233	0.679	1
NLRP8	4p-Del	0.679	1
NSD1	Del_1q44	0.679	1
TGFBR2	Del_16q23.1	0.679	1
Amp_13q34	Del_14q11.2	0.679	1
CASP8	MLL2	0.68	1
NUDT11	ZNF750	0.68	1
PIK3CA	Amp_11p13	0.68	1
12p-Amp	Del_4p16.3	0.68	1
12p-Amp	Del_4q35.2	0.68	1
14q-Amp	Del_4q35.2	0.68	1
JUB	RB1	0.681	1
KDM6A	Amp_Xq28	0.681	1
KDM6A	Del_Xp22.2	0.681	1
NOTCH1	Amp_20q11.22	0.681	1
RASA1	Amp_Xq28	0.681	1
RB1	Amp_Xq28	0.681	1
GAGE2A	Del_10p15.3	0.682	1
HLA-B	Del_17q25.3	0.682	1
KRT17	21q-Del	0.682	1
KRTAP5-5	Del_4q22.1	0.682	1
KRTAP5-5	Del_10p15.3	0.682	1
NAP1L2	Amp_5p12	0.682	1
NLRP8	Del_1p36.21	0.682	1
RASA1	Amp_20q11.22	0.682	1
THSD7A	9q-Del	0.682	1
7q-Amp	Del_Xp21.3	0.682	1
Amp_8p11.23	Del_2q36.2	0.682	1
Amp_11p13	Del_13q12.11	0.682	1
Amp_15q26.3	Del_Xp21.3	0.682	1
Del_1p36.21	Del_2q21.2	0.682	1
DYSF	Del_10p11.21	0.683	1
EPHA2	Amp_12q15	0.683	1
RASA1	8q-Amp	0.683	1
TP53	Amp_Xq28	0.683	1
Amp_9p23	Amp_12q15	0.683	1
ADAM19	RASA1	0.684	1
ADAM19	3p-Del	0.684	1
EMG1	Amp_8p11.23	0.684	1
JUB	Amp_8q24.21	0.684	1
KDM6A	ZNF623	0.684	1
KIAA1267	RASA1	0.684	1
KIAA1267	RB1	0.684	1
NFE2L2	Amp_18q11.2	0.684	1
RASA1	ZNF623	0.684	1
Amp_8p11.23	Del_1q44	0.684	1
Amp_9p24.1	Del_5q12.1	0.684	1
ADAM19	Amp_9p13.3	0.685	1
BRAF	CDKN2A	0.685	1
CDKN2A	MAPK1	0.685	1
EP300	Amp_3q26.33	0.685	1
MLL2	NLRP8	0.685	1
MLL2	9q-Del	0.685	1
MLL2	Amp_15q26.3	0.685	1
NOTCH1	THSD7A	0.685	1
9q-Amp	Del_9p21.3	0.685	1
8p-Del	Amp_9p24.1	0.685	1
Del_16q23.1	Del_21q22.3	0.685	1
FGFR3	Del_5q35.3	0.686	1
5p-Amp	Del_4p16.3	0.686	1
Amp_20q11.22	Del_4q21.3	0.686	1
EPHA2	PIK3R1	0.687	1
EPHA2	VEZF1	0.687	1
MLL4	4q-Del	0.687	1
NSD1	Del_10p15.3	0.687	1
ASXL1	5p-Amp	0.688	1
CUL3	5p-Amp	0.688	1
EMG1	Amp_3q26.33	0.688	1
GAGE2A	HUWE1	0.688	1
GAGE2A	8p-Del	0.688	1
GAGE2A	Del_21q22.3	0.688	1
KRTAP5-5	8p-Del	0.688	1
NOTCH1	Amp_5p15.33	0.688	1
21q-Del	Del_Xp21.3	0.688	1
Amp_7p11.2	Amp_9p13.3	0.688	1
Amp_20q11.22	Del_1q44	0.688	1
CASP8	NFE2L2	0.689	1
CREBBP	4q-Del	0.689	1
FBXW7	HRAS	0.689	1
HRAS	7p-Amp	0.689	1
HUWE1	KEAP1	0.689	1
KEAP1	8p-Del	0.689	1
NAP1L2	Amp_11p13	0.689	1
TIGD4	Amp_11p13	0.689	1
ZNF233	Amp_11p13	0.689	1
7p-Amp	Del_5q35.3	0.689	1
8p-Amp	13q-Del	0.689	1
9q-Amp	Del_3p24.1	0.689	1
Amp_9p23	Del_1p13.2	0.689	1
FAT1	KDM6A	0.69	1
JUB	Del_16q23.1	0.69	1
MLL2	Amp_2q31.2	0.69	1
18q-Del	Del_14q32.32	0.69	1
Amp_5p15.33	Del_13q14.2	0.69	1
Amp_9p24.1	Del_Xp22.2	0.69	1
Amp_11p13	Del_11p15.5	0.69	1
PTEN	Del_Xq21.33	0.691	1
RAC1	Del_Xq21.33	0.691	1
8p-Amp	Del_18q23	0.691	1
3q-Del	Del_Xq21.33	0.691	1
Del_5q15	Del_14q32.32	0.691	1
ADAM19	18q-Del	0.693	1
BRAF	Amp_2q11.2	0.693	1
BRAF	Amp_6q12	0.693	1
BRAF	Amp_13q34	0.693	1
BRAF	Del_7q31.1	0.693	1
C3orf59	NLRP8	0.693	1
C3orf59	7q-Amp	0.693	1
C3orf59	9q-Del	0.693	1
C3orf59	Xp-Del	0.693	1
C3orf59	Amp_15q26.3	0.693	1
DYSF	MAPK1	0.693	1
FAT1	Del_4q35.2	0.693	1
FGFR3	NLRP8	0.693	1
FGFR3	9q-Del	0.693	1
FGFR3	Xp-Del	0.693	1
FGFR3	Amp_15q26.3	0.693	1
FGFR3	Del_2q21.2	0.693	1
KIAA1267	18q-Del	0.693	1
MAPK1	Amp_2q11.2	0.693	1
MAPK1	Amp_6q12	0.693	1
MAPK1	Amp_13q34	0.693	1
MAPK1	Del_7q31.1	0.693	1
MLL2	NAP1L2	0.693	1
NOTCH1	20p-Amp	0.693	1
NUDT11	Amp_2q11.2	0.693	1
NUDT11	Amp_13q34	0.693	1
NUDT11	Del_7q31.1	0.693	1
PIK3R1	3q-Amp	0.693	1
RASA1	Del_9p21.3	0.693	1
RHOA	7q-Amp	0.693	1
RHOA	9q-Del	0.693	1
RHOA	Xp-Del	0.693	1
RHOA	Amp_15q26.3	0.693	1
RHOA	Del_2q21.2	0.693	1
Amp_5p12	Amp_17q12	0.693	1
Amp_6p12.1	Del_3p26.2	0.693	1
ADAM19	Del_3p12.1	0.694	1
ASXL1	Amp_2q31.2	0.694	1
CREBBP	RB1	0.694	1
DYSF	14q-Amp	0.694	1
DYSF	Del_14q32.32	0.694	1
FBXW7	KDM6A	0.694	1
FBXW7	RB1	0.694	1
KRTAP5-5	11q-Del	0.694	1
KRTAP5-5	Del_7q36.1	0.694	1
OR6C65	Amp_2q31.2	0.694	1
PIK3CA	Del_4p15.2	0.694	1
PTEN	Amp_9p23	0.694	1
PTEN	Del_16q23.3	0.694	1
RAC1	Del_16q23.3	0.694	1
RB1	7p-Amp	0.694	1
12p-Amp	Del_7q31.1	0.694	1
14q-Amp	Del_7q31.1	0.694	1
Amp_6q12	Del_14q32.32	0.694	1
MAPK1	5p-Amp	0.695	1
RAC1	3q-Amp	0.695	1
Amp_8q24.21	Del_16q23.3	0.695	1
NLRP8	21q-Del	0.696	1
NOTCH1	PIK3CA	0.697	1
20q-Amp	Del_9q21.11	0.697	1
EMG1	Del_5q35.3	0.698	1
HLA-A	PIK3R1	0.698	1
HLA-A	VEZF1	0.698	1
KEAP1	MEFV	0.698	1
MEFV	9q-Amp	0.698	1
VEZF1	9q-Amp	0.698	1
14q-Amp	Del_3p14.2	0.698	1
Amp_7p11.2	Amp_9p23	0.698	1
Amp_20q11.22	Del_2q36.2	0.698	1
ADAM19	ASXL1	0.699	1
ADAM19	PTPN14	0.699	1
ASXL1	KIAA1267	0.699	1
CUL3	KIAA1267	0.699	1
CUL3	ZNF623	0.699	1
IRS4	ZNF623	0.699	1
KIAA1267	PTPN14	0.699	1
KIAA1267	1q-Amp	0.699	1
MLL2	9p-Del	0.699	1
NAP1L2	Amp_12q15	0.699	1
NAP1L2	Del_9q21.11	0.699	1
TIGD4	Del_9q21.11	0.699	1
ZNF233	Amp_12q15	0.699	1
ZNF233	Del_9q21.11	0.699	1
ZNF623	1q-Amp	0.699	1
Amp_8q11.21	Del_13q12.11	0.699	1
Amp_Xq28	Del_4q35.2	0.699	1
Del_4q21.3	Del_19p13.3	0.699	1
Del_19p13.3	Del_Xp21.3	0.699	1
EP300	20p-Amp	0.7	1
EP300	Amp_18q11.2	0.7	1
EPHA2	Del_17q25.3	0.7	1
KEAP1	9p-Del	0.7	1
KRT17	Del_14q11.2	0.7	1
MEFV	Amp_18p11.31	0.7	1
SMAD4	Del_10p15.3	0.7	1
15q-Del	Amp_7p11.2	0.7	1
KDM6A	Del_5q35.3	0.701	1
MLL4	Del_14q11.2	0.701	1
NFE2L2	Amp_12p13.33	0.701	1
8p-Amp	Amp_3q26.33	0.701	1
Amp_7p11.2	Amp_18p11.31	0.701	1
Amp_18q11.2	Del_10p11.21	0.701	1
BRAF	NSD1	0.702	1
C3orf59	Amp_3q26.33	0.702	1
C3orf59	Del_11q23.1	0.702	1
CDKN2A	Amp_20q11.22	0.702	1
EMG1	4p-Del	0.702	1
EPHA2	NSD1	0.702	1
FGFR3	Amp_5p15.33	0.702	1
HLA-A	Del_7q36.1	0.702	1
KEAP1	Amp_12q15	0.702	1
KIAA1267	Del_10p11.21	0.702	1
NOTCH1	OR6C65	0.702	1
9q-Amp	11p-Del	0.702	1
9q-Amp	11q-Del	0.702	1
Del_16q23.1	Del_19p13.3	0.702	1
NOTCH1	ZNF623	0.703	1
Amp_8p11.23	Del_4q22.1	0.703	1
HUWE1	Amp_8q11.21	0.704	1
RB1	Del_18q23	0.704	1
3q-Amp	Del_7q31.1	0.704	1
4p-Del	Amp_12q15	0.704	1
8p-Del	Amp_8q11.21	0.704	1
Amp_8q11.21	Del_21q22.3	0.704	1
ADAM19	Del_3p24.1	0.705	1
FAT1	Del_10p15.3	0.705	1
HUWE1	21q-Del	0.705	1
PTEN	20q-Amp	0.705	1
RAC1	20q-Amp	0.705	1
ZNF750	Amp_11p13	0.705	1
20q-Amp	3q-Del	0.705	1
Amp_9p24.1	Del_Xq21.33	0.705	1
Amp_9p23	Del_4q22.1	0.705	1
Del_16q23.1	Del_Xq21.33	0.705	1
ASXL1	Del_Xp22.2	0.706	1
CUL3	Del_Xp22.2	0.706	1
GAGE2A	Amp_9p24.1	0.706	1
GAGE2A	Del_16q23.1	0.706	1
HLA-B	Del_16q23.3	0.706	1
HRAS	10p-Del	0.706	1
IRS4	Amp_Xq28	0.706	1
JUB	1q-Amp	0.706	1
KDM6A	10p-Del	0.706	1
KDM6A	Del_1p36.21	0.706	1
KDM6A	Del_4q21.3	0.706	1
KDM6A	Del_Xp21.3	0.706	1
KRTAP5-5	Del_16q23.1	0.706	1
OR6C65	Del_Xp22.2	0.706	1
PIK3CA	4p-Del	0.706	1
PIK3R1	Del_13q14.2	0.706	1
PTPN14	Del_Xp22.2	0.706	1
RASA1	Del_4q21.3	0.706	1
RASA1	Del_Xp21.3	0.706	1
TGFBR2	Del_16q23.3	0.706	1
THSD7A	8p-Amp	0.706	1
8p-Amp	Del_4q21.3	0.706	1
4q-Del	Del_Xp21.3	0.706	1
Amp_7p11.2	Del_Xp22.2	0.706	1
MLL2	15q-Del	0.707	1
NOTCH1	8q-Amp	0.707	1
11q-Del	Amp_12p13.33	0.707	1
Amp_8q11.21	Del_13q14.2	0.707	1
Amp_9p13.3	Del_19p13.3	0.707	1
C3orf59	RASA1	0.708	1
C3orf59	RB1	0.708	1
FGFR3	KDM6A	0.708	1
FGFR3	RASA1	0.708	1
RASA1	RHOA	0.708	1
RB1	RHOA	0.708	1
RB1	Amp_5p12	0.708	1
7q-Amp	Amp_11q13.3	0.708	1
15q-Del	Del_9p21.3	0.708	1
Amp_8p11.23	Amp_18p11.31	0.708	1
KRT17	12p-Amp	0.709	1
KRT17	Del_14q32.32	0.709	1
MAPK1	Amp_8p11.23	0.709	1
SMAD4	8p-Del	0.709	1
SMAD4	Del_21q22.3	0.709	1
Amp_17q12	Del_21q22.3	0.709	1
CASP8	Amp_15q26.3	0.71	1
FBXW7	Amp_9p24.1	0.71	1
FBXW7	Del_16q23.1	0.71	1
HLA-B	TIGD4	0.71	1
HLA-B	ZNF233	0.71	1
HRAS	NLRP8	0.71	1
HRAS	7q-Amp	0.71	1
KIAA1267	Amp_7q21.3	0.71	1
MEFV	ZNF750	0.71	1
NAP1L2	Del_17q25.3	0.71	1
NFE2L2	Amp_2q11.2	0.71	1
NLRP8	Del_2q22.1	0.71	1
TGFBR2	ZNF233	0.71	1
TIGD4	Del_17q25.3	0.71	1
VEZF1	ZNF750	0.71	1
ZNF233	Del_17q25.3	0.71	1
ZNF623	Amp_7q21.3	0.71	1
12p-Amp	Del_Xp22.2	0.71	1
Amp_6p12.1	Del_7q31.1	0.71	1
Amp_8p11.23	Del_10q23.31	0.71	1
Amp_13q22.1	Del_16q23.1	0.71	1
Del_14q32.32	Del_Xp22.2	0.71	1
KDM6A	4p-Del	0.711	1
MLL2	Amp_9p23	0.711	1
MLL2	Del_16q23.3	0.711	1
NSD1	PIK3CA	0.711	1
PTEN	15q-Del	0.711	1
RAC1	SMAD4	0.711	1
RAC1	15q-Del	0.711	1
RAC1	Amp_17q12	0.711	1
SMAD4	3q-Del	0.711	1
CDKN2A	Del_8p23.2	0.712	1
PIK3R1	Del_5q12.1	0.712	1
PIK3R1	Del_5q15	0.712	1
PTEN	Del_13q14.2	0.712	1
SMAD4	Amp_11q13.3	0.712	1
VEZF1	Del_5q12.1	0.712	1
Amp_12q15	Del_11p15.5	0.712	1
Amp_13q22.1	Del_11q23.1	0.712	1
Amp_Xq28	Del_5q15	0.712	1
Del_4p15.2	Del_Xp22.2	0.712	1
EPHA2	Amp_8p11.23	0.713	1
HRAS	Del_10p15.3	0.713	1
5p-Amp	Del_19p13.3	0.713	1
Amp_12q15	Del_13q12.11	0.713	1
CDKN2A	FBXW7	0.714	1
CDKN2A	Amp_13q22.1	0.714	1
CREBBP	FAT1	0.714	1
NFE2L2	Amp_2q31.2	0.714	1
NOTCH1	21q-Del	0.715	1
PIK3CA	8p-Amp	0.715	1
PIK3CA	Amp_12q15	0.715	1
3q-Amp	Amp_11p13	0.715	1
8p-Amp	3p-Del	0.715	1
9q-Del	Amp_8q24.21	0.715	1
ASXL1	Amp_20q11.22	0.716	1
BRAF	Amp_20q11.22	0.716	1
EP300	3q-Del	0.716	1
KDM6A	Amp_7p11.2	0.716	1
PTPN14	Amp_20q11.22	0.716	1
RAC1	Del_10q23.31	0.716	1
RAC1	Del_11p15.5	0.716	1
Amp_7q21.3	Del_14q32.32	0.716	1
CASP8	FGFR3	0.717	1
CASP8	RHOA	0.717	1
EMG1	Del_2q22.1	0.717	1
FGFR3	Del_2q22.1	0.717	1
PIK3CA	Del_7q31.1	0.717	1
Del_1q44	Del_2q22.1	0.717	1
DYSF	Del_1p13.2	0.718	1
DYSF	Del_2q36.2	0.718	1
GAGE2A	Del_16q23.3	0.718	1
KRT17	Amp_6p12.1	0.718	1
KRTAP5-5	Del_16q23.3	0.718	1
SMAD4	TP53	0.718	1
TP53	15q-Del	0.718	1
TP53	Amp_17q12	0.718	1
Amp_6q12	Del_2q36.2	0.718	1
Amp_13q34	Del_1p13.2	0.718	1
ASXL1	CREBBP	0.719	1
ASXL1	7p-Amp	0.719	1
ASXL1	13q-Del	0.719	1
BRAF	NLRP8	0.719	1
BRAF	7q-Amp	0.719	1
BRAF	9q-Del	0.719	1
BRAF	Xp-Del	0.719	1
BRAF	Amp_15q26.3	0.719	1
BRAF	Del_2q21.2	0.719	1
CREBBP	PTPN14	0.719	1
CUL3	FBXW7	0.719	1
CUL3	7p-Amp	0.719	1
FBXW7	1q-Amp	0.719	1
HLA-B	Del_5q35.3	0.719	1
IRS4	13q-Del	0.719	1
KDM6A	21q-Del	0.719	1
MAPK1	NLRP8	0.719	1
MAPK1	9q-Del	0.719	1
MAPK1	Xp-Del	0.719	1
MAPK1	Amp_15q26.3	0.719	1
MAPK1	Del_2q21.2	0.719	1
NUDT11	9q-Del	0.719	1
NUDT11	Amp_15q26.3	0.719	1
OR6C65	7p-Amp	0.719	1
OR6C65	13q-Del	0.719	1
RB1	21q-Del	0.719	1
SMAD4	11q-Del	0.719	1
SMAD4	Del_19p13.3	0.719	1
TGFBR2	9q-Amp	0.719	1
1q-Amp	13q-Del	0.719	1
11q-Del	15q-Del	0.719	1
BRAF	Amp_11q13.3	0.72	1
HLA-B	Del_8p23.2	0.72	1
NUDT11	Amp_11q13.3	0.72	1
PTEN	Del_5q12.1	0.72	1
PTEN	Del_5q15	0.72	1
TGFBR2	20q-Amp	0.72	1
TGFBR2	Del_3p14.2	0.72	1
20q-Amp	Del_17q25.3	0.72	1
7q-Amp	Amp_9p13.3	0.72	1
9q-Del	Amp_9p13.3	0.72	1
Amp_9p13.3	Amp_15q26.3	0.72	1
Amp_9p13.3	Del_2q21.2	0.72	1
ASXL1	TP53	0.721	1
CDKN2A	20p-Amp	0.721	1
EMG1	Amp_9p13.3	0.721	1
KEAP1	5p-Amp	0.721	1
TP53	VEZF1	0.721	1
14q-Amp	Del_11q23.1	0.721	1
Amp_9p13.3	Del_1q44	0.721	1
Amp_12p13.33	Del_1q44	0.721	1
DYSF	MEFV	0.722	1
DYSF	VEZF1	0.722	1
HUWE1	PIK3CA	0.722	1
JUB	Del_16q23.3	0.722	1
MEFV	Amp_2q11.2	0.722	1
MEFV	Amp_6q12	0.722	1
MEFV	Amp_13q34	0.722	1
MEFV	Del_7q31.1	0.722	1
MLL2	Del_5q35.3	0.722	1
PIK3R1	Amp_2q11.2	0.722	1
PIK3R1	Amp_6q12	0.722	1
PIK3R1	Del_7q31.1	0.722	1
VEZF1	Amp_13q34	0.722	1
VEZF1	Del_7q31.1	0.722	1
5p-Amp	18q-Del	0.722	1
Amp_5p12	Amp_13q22.1	0.722	1
Amp_9p23	Amp_Xq28	0.722	1
Amp_Xq28	Del_16q23.3	0.722	1
Del_16q23.3	Del_21q22.3	0.722	1
Del_16q23.3	Del_Xp22.2	0.722	1
ASXL1	C3orf59	0.723	1
ASXL1	FGFR3	0.723	1
ASXL1	RHOA	0.723	1
C3orf59	CUL3	0.723	1
C3orf59	IRS4	0.723	1
C3orf59	PTPN14	0.723	1
C3orf59	1q-Amp	0.723	1
CUL3	FGFR3	0.723	1
CUL3	RHOA	0.723	1
FGFR3	OR6C65	0.723	1
FGFR3	PTPN14	0.723	1
KIAA1267	8q-Amp	0.723	1
NLRP8	Del_14q11.2	0.723	1
PTPN14	RHOA	0.723	1
RHOA	1q-Amp	0.723	1
ZNF623	8q-Amp	0.723	1
7q-Amp	Del_14q11.2	0.723	1
11q-Del	18q-Del	0.723	1
Amp_2q11.2	Del_13q14.2	0.723	1
Amp_6q12	Del_4p16.3	0.723	1
Amp_6q12	Del_13q14.2	0.723	1
GAGE2A	20q-Amp	0.724	1
KDM6A	MLL2	0.724	1
MLL2	RASA1	0.724	1
20q-Amp	Amp_7p11.2	0.724	1
20q-Amp	Amp_11q13.3	0.724	1
20q-Amp	Del_4q22.1	0.724	1
Amp_13q22.1	Del_4q35.2	0.724	1
Amp_20q11.22	Del_11p15.5	0.724	1
C3orf59	Amp_12p13.33	0.725	1
FGFR3	Amp_9p13.3	0.725	1
FGFR3	Amp_12p13.33	0.725	1
THSD7A	4p-Del	0.725	1
1q-Amp	8q-Amp	0.725	1
4p-Del	Del_Xp21.3	0.725	1
Amp_2q11.2	Amp_11p13	0.725	1
Amp_11p13	Amp_13q34	0.725	1
Del_16q23.3	Del_Xq21.33	0.725	1
CREBBP	12p-Amp	0.726	1
EMG1	18q-Del	0.726	1
FBXW7	12p-Amp	0.726	1
FBXW7	14q-Amp	0.726	1
NFE2L2	Amp_3q26.33	0.726	1
PTEN	20p-Amp	0.726	1
RAC1	20p-Amp	0.726	1
RAC1	5q-Del	0.726	1
14q-Amp	9p-Del	0.726	1
20p-Amp	3q-Del	0.726	1
20p-Amp	Del_9q21.11	0.726	1
3q-Amp	10p-Del	0.726	1
3q-Amp	8p-Del	0.726	1
11p-Del	Amp_18q11.2	0.726	1
3q-Del	Amp_18q11.2	0.726	1
Amp_11p13	Amp_18p11.31	0.726	1
Amp_12q15	Amp_18q11.2	0.726	1
ADAM19	Del_1p13.2	0.727	1
HLA-A	Del_16q23.1	0.727	1
KRT17	Amp_11p13	0.727	1
NFE2L2	Del_10p11.21	0.727	1
TP53	Amp_13q34	0.727	1
9q-Amp	Del_16q23.1	0.727	1
Amp_8q11.21	Del_8p23.2	0.727	1
11q-Del	Amp_5p12	0.728	1
Amp_7p11.2	Del_18q23	0.728	1
NAP1L2	Del_8p23.2	0.729	1
SMAD4	Del_Xq21.33	0.729	1
TIGD4	Del_8p23.2	0.729	1
TP53	20q-Amp	0.729	1
ZNF233	Del_3p14.2	0.729	1
15q-Del	Del_Xq21.33	0.729	1
Amp_5p15.33	Amp_7p11.2	0.729	1
Amp_6q12	Del_10p15.3	0.729	1
Amp_9p24.1	Del_4q21.3	0.729	1
Amp_17q12	Del_Xq21.33	0.729	1
Del_16q23.1	Del_Xp21.3	0.729	1
MAPK1	Del_5q35.3	0.73	1
MLL4	NFE2L2	0.73	1
TGFBR2	4p-Del	0.73	1
7q-Amp	18q-Del	0.73	1
18q-Del	Amp_15q26.3	0.73	1
18q-Del	Del_2q21.2	0.73	1
Amp_9p23	Del_5q12.1	0.73	1
Del_2q22.1	Del_16q23.1	0.73	1
ASXL1	Del_Xp21.3	0.731	1
CUL3	Del_Xp21.3	0.731	1
EMG1	Del_10p11.21	0.731	1
EP300	KRTAP5-5	0.731	1
HLA-A	ZNF233	0.731	1
KEAP1	TIGD4	0.731	1
KRTAP5-5	Del_10q23.31	0.731	1
KRTAP5-5	Del_11p15.5	0.731	1
NAP1L2	9q-Amp	0.731	1
OR6C65	Del_1p36.21	0.731	1
OR6C65	Del_4q21.3	0.731	1
PIK3R1	9p-Del	0.731	1
PTPN14	10p-Del	0.731	1
PTPN14	Del_Xp21.3	0.731	1
ZNF233	9q-Amp	0.731	1
1q-Amp	Del_1p36.21	0.731	1
20q-Amp	Del_5q35.3	0.731	1
ADAM19	PTEN	0.732	1
ADAM19	RAC1	0.732	1
EPHA2	Del_11q23.1	0.732	1
HRAS	RB1	0.732	1
KDM6A	4q-Del	0.732	1
KIAA1267	PTEN	0.732	1
KIAA1267	RAC1	0.732	1
KIAA1267	3q-Del	0.732	1
PTEN	ZNF623	0.732	1
RAC1	ZNF623	0.732	1
RB1	8p-Amp	0.732	1
TIGD4	Del_13q12.11	0.732	1
ZNF233	Del_13q12.11	0.732	1
ZNF623	3q-Del	0.732	1
9q-Amp	Amp_7p11.2	0.732	1
5q-Del	Amp_8p11.23	0.732	1
BRAF	RASA1	0.733	1
BRAF	RB1	0.733	1
CREBBP	Amp_7p11.2	0.733	1
DYSF	Del_5q15	0.733	1
EP300	TGFBR2	0.733	1
EP300	Del_17q25.3	0.733	1
HLA-B	Del_11p15.5	0.733	1
KDM6A	MAPK1	0.733	1
KRT17	8q-Amp	0.733	1
MAPK1	RASA1	0.733	1
MAPK1	RB1	0.733	1
NUDT11	RASA1	0.733	1
NUDT11	RB1	0.733	1
PTEN	Del_3p24.1	0.733	1
TGFBR2	Del_10q23.31	0.733	1
CREBBP	Del_18q23	0.734	1
MLL4	PIK3R1	0.734	1
OR6C65	Del_5q35.3	0.734	1
ZNF750	Del_3p24.1	0.735	1
CREBBP	Del_5q15	0.736	1
EMG1	Amp_7q21.3	0.736	1
EPHA2	9q-Amp	0.736	1
KIAA1267	Del_10p15.3	0.736	1
KRT17	11p-Del	0.736	1
KRT17	Amp_12q15	0.736	1
KRT17	Del_6p25.3	0.736	1
KRT17	Del_9q21.11	0.736	1
MLL2	Del_3p24.1	0.736	1
Amp_7q21.3	Del_1q44	0.736	1
Amp_11p13	Del_4p16.3	0.736	1
Amp_11p13	Del_13q14.2	0.736	1
BRAF	4p-Del	0.737	1
FAT1	Del_9p21.3	0.737	1
GAGE2A	5q-Del	0.737	1
KRTAP5-5	5q-Del	0.737	1
KRTAP5-5	Amp_18q11.2	0.737	1
MAPK1	4p-Del	0.737	1
NLRP8	12p-Amp	0.737	1
PTEN	Del_9p21.3	0.737	1
ZNF750	Del_17q25.3	0.737	1
12p-Amp	9q-Del	0.737	1
9q-Del	Del_14q32.32	0.737	1
Amp_8q11.21	Del_Xq21.33	0.737	1
Amp_8q24.21	Amp_9p24.1	0.737	1
Amp_8q24.21	Del_16q23.1	0.737	1
Del_2q21.2	Del_14q32.32	0.737	1
CDKN2A	CUL3	0.738	1
CDKN2A	PTPN14	0.738	1
CDKN2A	Amp_2q11.2	0.738	1
FAT1	IRS4	0.738	1
FAT1	OR6C65	0.738	1
FAT1	Amp_2q11.2	0.738	1
JUB	20q-Amp	0.738	1
RHOA	3p-Del	0.738	1
SMAD4	Amp_3q26.33	0.738	1
3q-Amp	18q-Del	0.738	1
8q-Amp	9p-Del	0.738	1
8q-Amp	Amp_11p13	0.738	1
Del_16q23.3	Del_19p13.3	0.738	1
NFE2L2	Amp_7q21.3	0.739	1
8q-Amp	Amp_9p24.1	0.739	1
11p-Del	Del_2q22.1	0.739	1
CDKN2A	HLA-B	0.74	1
CDKN2A	TGFBR2	0.74	1
FBXW7	Del_16q23.3	0.74	1
FGFR3	Del_10p11.21	0.74	1
HUWE1	20q-Amp	0.74	1
HUWE1	Amp_6q12	0.74	1
KRT17	Amp_8q24.21	0.74	1
RASA1	Del_2q22.1	0.74	1
RB1	Del_2q22.1	0.74	1
7p-Amp	Del_16q23.3	0.74	1
7q-Amp	Del_10p11.21	0.74	1
8p-Amp	Del_7q36.1	0.74	1
11p-Del	Amp_6q12	0.74	1
8p-Del	Amp_6q12	0.74	1
Amp_6p12.1	Del_3p14.2	0.74	1
Amp_7p11.2	Del_7q36.1	0.74	1
Amp_13q34	Del_6p25.3	0.74	1
Del_7q31.1	Del_21q22.3	0.74	1
CDKN2A	15q-Del	0.741	1
FAT1	Amp_17q12	0.741	1
KEAP1	MLL2	0.741	1
NAP1L2	ZNF750	0.741	1
NOTCH1	Del_5q15	0.741	1
THSD7A	Del_14q32.32	0.742	1
ZNF233	Del_3p12.1	0.742	1
14q-Amp	Del_1p36.21	0.742	1
20p-Amp	Del_18q23	0.742	1
Del_1p13.2	Del_14q32.32	0.742	1
Del_14q32.32	Del_Xp21.3	0.742	1
ADAM19	Del_3p26.2	0.743	1
CREBBP	Del_2q22.1	0.743	1
CUL3	21q-Del	0.743	1
IRS4	21q-Del	0.743	1
KRTAP5-5	TP53	0.743	1
OR6C65	4p-Del	0.743	1
PTPN14	21q-Del	0.743	1
PTPN14	4p-Del	0.743	1
TGFBR2	Del_3p12.1	0.743	1
THSD7A	Amp_5p15.33	0.743	1
1q-Amp	21q-Del	0.743	1
10p-Del	Amp_5p15.33	0.743	1
Amp_3q26.33	Amp_9p13.3	0.743	1
Amp_8p11.23	Del_19p13.3	0.743	1
Amp_18p11.31	Del_Xq21.33	0.743	1
ADAM19	8p-Del	0.744	1
ADAM19	Del_21q22.3	0.744	1
KIAA1267	8p-Del	0.744	1
MLL4	Del_2q36.2	0.744	1
DYSF	Del_8p23.2	0.745	1
EP300	Del_Xq21.33	0.745	1
FGFR3	Del_3p14.2	0.745	1
NFE2L2	7p-Amp	0.745	1
NFE2L2	13q-Del	0.745	1
RASA1	Del_14q11.2	0.745	1
7q-Amp	Del_13q12.11	0.745	1
Xp-Del	Del_13q12.11	0.745	1
Amp_9p24.1	Amp_12p13.33	0.745	1
Amp_15q26.3	Del_13q12.11	0.745	1
EMG1	Del_1p13.2	0.746	1
EMG1	Del_2q36.2	0.746	1
KRT17	TGFBR2	0.746	1
KRT17	Del_17q25.3	0.746	1
MEFV	NLRP8	0.746	1
MEFV	7q-Amp	0.746	1
MEFV	9q-Del	0.746	1
MEFV	Xp-Del	0.746	1
MEFV	Amp_15q26.3	0.746	1
MEFV	Del_2q21.2	0.746	1
PIK3CA	Del_14q11.2	0.746	1
PIK3R1	7q-Amp	0.746	1
PIK3R1	Xp-Del	0.746	1
PIK3R1	Amp_15q26.3	0.746	1
PIK3R1	Del_2q21.2	0.746	1
VEZF1	9q-Del	0.746	1
VEZF1	Amp_15q26.3	0.746	1
VEZF1	Del_2q21.2	0.746	1
5q-Del	Amp_20q11.22	0.746	1
Amp_18q11.2	Del_2q36.2	0.746	1
Del_1p13.2	Del_1q44	0.746	1
ASXL1	NUDT11	0.747	1
ASXL1	Amp_5p12	0.747	1
BRAF	CUL3	0.747	1
BRAF	1q-Amp	0.747	1
CUL3	MAPK1	0.747	1
CUL3	NUDT11	0.747	1
HUWE1	Del_14q11.2	0.747	1
MAPK1	OR6C65	0.747	1
NUDT11	OR6C65	0.747	1
OR6C65	Amp_5p12	0.747	1
SMAD4	15q-Del	0.747	1
SMAD4	Amp_17q12	0.747	1
TGFBR2	20p-Amp	0.747	1
1q-Amp	Amp_5p12	0.747	1
20p-Amp	Del_17q25.3	0.747	1
Amp_8p11.23	Del_14q11.2	0.747	1
Amp_11p13	Del_4p15.2	0.747	1
Amp_18q11.2	Del_17q25.3	0.747	1
ADAM19	Del_Xq21.33	0.748	1
FGFR3	Amp_7q21.3	0.748	1
KIAA1267	Del_Xq21.33	0.748	1
KRT17	Amp_5p12	0.748	1
NLRP8	Amp_5p15.33	0.748	1
NLRP8	Del_11q23.1	0.748	1
TP53	10p-Del	0.748	1
TP53	Del_1p36.21	0.748	1
TP53	Del_4q21.3	0.748	1
7q-Amp	Del_11q23.1	0.748	1
Amp_8q11.21	Del_5q35.3	0.748	1
Amp_9p13.3	Del_4q35.2	0.748	1
Del_2q21.2	Del_11q23.1	0.748	1
NAP1L2	3q-Amp	0.749	1
PIK3CA	TGFBR2	0.749	1
TGFBR2	3p-Del	0.749	1
THSD7A	Del_4p16.3	0.749	1
21q-Del	Amp_9p24.1	0.749	1
21q-Del	Del_16q23.1	0.749	1
9p-Del	Del_Xp22.2	0.749	1
Amp_18p11.31	Del_10q23.31	0.749	1
Del_4p16.3	Del_Xp21.3	0.749	1
EMG1	Del_10p15.3	0.75	1
KRTAP5-5	Amp_2q31.2	0.75	1
MLL2	3p-Del	0.75	1
RB1	Amp_12p13.33	0.75	1
THSD7A	Amp_5p12	0.75	1
ZNF750	5p-Amp	0.75	1
10p-Del	Amp_5p12	0.75	1
11p-Del	Amp_12p13.33	0.75	1
Xp-Del	Amp_7q21.3	0.75	1
Amp_11p13	Del_10p11.21	0.75	1
Del_1q44	Del_4q22.1	0.75	1
Del_1q44	Del_10p15.3	0.75	1
ASXL1	Del_18q23	0.751	1
DYSF	Del_19p13.3	0.751	1
HLA-A	Del_16q23.3	0.751	1
NFE2L2	7q-Amp	0.751	1
5p-Amp	Del_3p14.2	0.751	1
7q-Amp	Amp_6p12.1	0.751	1
Amp_6p12.1	Amp_15q26.3	0.751	1
Del_4p16.3	Del_Xq21.33	0.751	1
Del_4q35.2	Del_Xq21.33	0.751	1
DYSF	NAP1L2	0.752	1
DYSF	TIGD4	0.752	1
DYSF	ZNF233	0.752	1
HLA-A	KEAP1	0.752	1
KEAP1	9q-Amp	0.752	1
KRT17	Amp_7p11.2	0.752	1
NAP1L2	Amp_6q12	0.752	1
TIGD4	Amp_2q11.2	0.752	1
TIGD4	Amp_6q12	0.752	1
TIGD4	Amp_13q34	0.752	1
ZNF233	Amp_6q12	0.752	1
ZNF233	Amp_13q34	0.752	1
ZNF233	Del_7q31.1	0.752	1
20q-Amp	Del_4p15.2	0.752	1
C3orf59	PTEN	0.753	1
C3orf59	3q-Del	0.753	1
CDKN2A	VEZF1	0.753	1
EP300	JUB	0.753	1
EPHA2	ZNF750	0.753	1
FAT1	Del_5q35.3	0.753	1
FGFR3	PTEN	0.753	1
FGFR3	3q-Del	0.753	1
JUB	Amp_3q26.33	0.753	1
JUB	Del_11p15.5	0.753	1
PTEN	RHOA	0.753	1
RAC1	RHOA	0.753	1
RHOA	3q-Del	0.753	1
3q-Amp	Amp_5p15.33	0.753	1
18q-Del	Amp_8p11.23	0.753	1
Del_11p15.5	Del_Xp22.2	0.753	1
EP300	EPHA2	0.754	1
NAP1L2	Amp_18p11.31	0.754	1
Amp_12q15	Amp_18p11.31	0.754	1
ASXL1	4q-Del	0.755	1
DYSF	TGFBR2	0.755	1
DYSF	Del_17q25.3	0.755	1
EMG1	HUWE1	0.755	1
EMG1	8p-Del	0.755	1
FBXW7	20q-Amp	0.755	1
FGFR3	NOTCH1	0.755	1
HLA-B	Amp_2q11.2	0.755	1
HLA-B	Del_7q31.1	0.755	1
MLL4	PIK3CA	0.755	1
MLL4	3p-Del	0.755	1
MLL4	Del_4p16.3	0.755	1
MLL4	Del_4q35.2	0.755	1
MLL4	Del_10p15.3	0.755	1
TGFBR2	Amp_6q12	0.755	1
1q-Amp	8p-Amp	0.755	1
1q-Amp	Amp_7p11.2	0.755	1
20q-Amp	11q-Del	0.755	1
20q-Amp	13q-Del	0.755	1
20q-Amp	Del_19p13.3	0.755	1
8p-Del	Del_1q44	0.755	1
Amp_2q11.2	Del_17q25.3	0.755	1
Amp_18q11.2	Del_Xq21.33	0.755	1
Del_1q44	Del_21q22.3	0.755	1
Del_10p15.3	Del_14q32.32	0.755	1
GAGE2A	JUB	0.756	1
GAGE2A	Amp_Xq28	0.756	1
GAGE2A	Del_3p26.2	0.756	1
JUB	KRTAP5-5	0.756	1
KRTAP5-5	Amp_Xq28	0.756	1
KRTAP5-5	Del_3p26.2	0.756	1
KRTAP5-5	Del_Xp22.2	0.756	1
MLL2	NFE2L2	0.756	1
SMAD4	Del_16q23.3	0.756	1
7p-Amp	Amp_9p13.3	0.756	1
8p-Amp	Del_14q11.2	0.756	1
Amp_9p13.3	Del_10p11.21	0.756	1
Amp_17q12	Del_16q23.3	0.756	1
KRT17	MLL2	0.757	1
Amp_20q11.22	Del_19p13.3	0.757	1
BRAF	Del_2q22.1	0.758	1
CASP8	NUDT11	0.758	1
HUWE1	Del_10q23.31	0.758	1
JUB	PTEN	0.758	1
KDM6A	12p-Amp	0.758	1
KDM6A	Del_14q32.32	0.758	1
PTEN	Amp_Xq28	0.758	1
PTEN	Del_Xp22.2	0.758	1
RASA1	Del_14q32.32	0.758	1
RB1	12p-Amp	0.758	1
RB1	14q-Amp	0.758	1
RB1	Del_14q32.32	0.758	1
14q-Amp	21q-Del	0.758	1
3q-Del	Amp_Xq28	0.758	1
KDM6A	PIK3R1	0.759	1
KDM6A	VEZF1	0.759	1
MEFV	RASA1	0.759	1
MEFV	RB1	0.759	1
MLL4	11p-Del	0.759	1
MLL4	Amp_12q15	0.759	1
PIK3R1	RB1	0.759	1
PTEN	5p-Amp	0.759	1
RASA1	VEZF1	0.759	1
RB1	VEZF1	0.759	1
Amp_8q11.21	Amp_12p13.33	0.759	1
Amp_9p23	Del_4q21.3	0.759	1
Amp_9p23	Del_Xp21.3	0.759	1
Amp_20q11.22	Del_4p15.2	0.759	1
EMG1	11q-Del	0.76	1
EMG1	Del_7q36.1	0.76	1
EMG1	Del_19p13.3	0.76	1
FGFR3	Del_3p12.1	0.76	1
NFE2L2	Del_1p36.21	0.76	1
NUDT11	Del_11q23.1	0.76	1
RHOA	Del_3p12.1	0.76	1
THSD7A	Amp_6p12.1	0.76	1
THSD7A	Del_4p15.2	0.76	1
TIGD4	Del_4q35.2	0.76	1
TIGD4	Del_13q14.2	0.76	1
ZNF233	Del_13q14.2	0.76	1
11q-Del	Del_1q44	0.76	1
18q-Del	Amp_9p24.1	0.76	1
9p-Del	Amp_6q12	0.76	1
Amp_6p12.1	Del_1p36.21	0.76	1
Del_1q44	Del_19p13.3	0.76	1
5p-Amp	Del_18q23	0.761	1
18q-Del	Amp_12q15	0.761	1
Amp_18p11.31	Del_19p13.3	0.761	1
Amp_18q11.2	Del_10p15.3	0.761	1
Del_3p14.2	Del_Xq21.33	0.761	1
Del_14q11.2	Del_19p13.3	0.761	1
Del_14q32.32	Del_18q23	0.761	1
MEFV	Amp_20q11.22	0.762	1
PIK3R1	Amp_20q11.22	0.762	1
Amp_7q21.3	Amp_11p13	0.762	1
Amp_12p13.33	Del_4p15.2	0.762	1
C3orf59	Del_2q36.2	0.763	1
CREBBP	GAGE2A	0.763	1
CREBBP	KRTAP5-5	0.763	1
FBXW7	KRTAP5-5	0.763	1
FBXW7	Amp_11p13	0.763	1
GAGE2A	13q-Del	0.763	1
GAGE2A	Amp_13q22.1	0.763	1
KEAP1	20q-Amp	0.763	1
KRTAP5-5	7p-Amp	0.763	1
KRTAP5-5	13q-Del	0.763	1
KRTAP5-5	Amp_13q22.1	0.763	1
MLL4	NAP1L2	0.763	1
NAP1L2	Amp_3q26.33	0.763	1
RHOA	Del_1p13.2	0.763	1
Amp_12q15	Del_4p16.3	0.763	1
Del_2q22.1	Del_17q25.3	0.763	1
CASP8	THSD7A	0.764	1
HLA-A	KRT17	0.764	1
KRT17	9q-Amp	0.764	1
MLL4	Del_4p15.2	0.764	1
MLL4	Del_5q12.1	0.764	1
NFE2L2	Del_1p13.2	0.764	1
7q-Amp	Amp_11p13	0.764	1
Amp_11p13	Del_2q21.2	0.764	1
ADAM19	SMAD4	0.765	1
ADAM19	Amp_17q12	0.765	1
BRAF	Amp_12p13.33	0.765	1
HUWE1	MLL4	0.765	1
KIAA1267	SMAD4	0.765	1
KIAA1267	15q-Del	0.765	1
MAPK1	Amp_9p13.3	0.765	1
NAP1L2	Del_5q12.1	0.765	1
SMAD4	ZNF623	0.765	1
SMAD4	20q-Amp	0.765	1
ZNF233	Del_5q15	0.765	1
ZNF623	Amp_17q12	0.765	1
EPHA2	Amp_8q24.21	0.766	1
PIK3CA	PTEN	0.766	1
Amp_6q12	Del_3p12.1	0.766	1
CUL3	Del_14q11.2	0.767	1
IRS4	Del_14q11.2	0.767	1
NSD1	PTEN	0.767	1
OR6C65	Del_14q11.2	0.767	1
PTPN14	Del_14q11.2	0.767	1
8q-Amp	Del_4q35.2	0.767	1
11p-Del	Del_Xp22.2	0.767	1
Amp_8q24.21	Del_1p36.21	0.767	1
Amp_Xq28	Del_6p25.3	0.767	1
Amp_Xq28	Del_9q21.11	0.767	1
Del_9q21.11	Del_Xp22.2	0.767	1
HUWE1	Del_14q32.32	0.768	1
KEAP1	Amp_5p15.33	0.768	1
NSD1	Del_16q23.1	0.768	1
12p-Amp	Del_21q22.3	0.768	1
14q-Amp	8p-Del	0.768	1
3q-Del	Amp_3q26.33	0.768	1
4q-Del	Amp_9p24.1	0.768	1
5q-Del	Amp_Xq28	0.768	1
Amp_8p11.23	Del_13q12.11	0.768	1
Amp_18q11.2	Amp_Xq28	0.768	1
Del_2q22.1	Del_16q23.3	0.768	1
ADAM19	Amp_9p24.1	0.769	1
CREBBP	PTEN	0.769	1
FBXW7	3q-Del	0.769	1
FGFR3	Del_Xq21.33	0.769	1
GAGE2A	THSD7A	0.769	1
GAGE2A	10p-Del	0.769	1
GAGE2A	Del_4q21.3	0.769	1
GAGE2A	Del_Xp21.3	0.769	1
HLA-A	ZNF750	0.769	1
KIAA1267	Del_16q23.1	0.769	1
KRTAP5-5	THSD7A	0.769	1
KRTAP5-5	10p-Del	0.769	1
KRTAP5-5	Del_1p36.21	0.769	1
KRTAP5-5	Del_4q21.3	0.769	1
KRTAP5-5	Del_Xp21.3	0.769	1
PTEN	13q-Del	0.769	1
RAC1	13q-Del	0.769	1
ZNF623	Del_16q23.1	0.769	1
ZNF750	9q-Amp	0.769	1
ZNF750	Amp_8p11.23	0.769	1
7p-Amp	18q-Del	0.769	1
7p-Amp	3q-Del	0.769	1
8q-Amp	11p-Del	0.769	1
8q-Amp	Del_6p25.3	0.769	1
13q-Del	3q-Del	0.769	1
Amp_11q13.3	Del_10p11.21	0.769	1
ASXL1	Del_2q22.1	0.77	1
CASP8	CUL3	0.77	1
CASP8	IRS4	0.77	1
EMG1	Amp_9p24.1	0.77	1
EMG1	Del_16q23.1	0.77	1
EP300	FBXW7	0.77	1
EP300	Amp_8q24.21	0.77	1
EPHA2	Amp_13q34	0.77	1
FBXW7	Del_10q23.31	0.77	1
NLRP8	Del_2q36.2	0.77	1
PTPN14	Del_2q22.1	0.77	1
3q-Amp	7q-Amp	0.77	1
3q-Amp	9q-Del	0.77	1
Xp-Del	Del_1p13.2	0.77	1
Amp_9p24.1	Del_1q44	0.77	1
Amp_13q22.1	Del_10q23.31	0.77	1
Del_1p13.2	Del_2q21.2	0.77	1
Del_1q44	Del_16q23.1	0.77	1
C3orf59	Del_10p15.3	0.771	1
FGFR3	Del_4q22.1	0.771	1
FGFR3	Del_10p15.3	0.771	1
KDM6A	Amp_6p12.1	0.771	1
RASA1	Amp_6p12.1	0.771	1
Amp_8p11.23	Del_10p11.21	0.771	1
ASXL1	MEFV	0.772	1
ASXL1	VEZF1	0.772	1
C3orf59	8q-Amp	0.772	1
CUL3	MEFV	0.772	1
CUL3	PIK3R1	0.772	1
CUL3	VEZF1	0.772	1
IRS4	MEFV	0.772	1
IRS4	PIK3R1	0.772	1
IRS4	VEZF1	0.772	1
MEFV	PTPN14	0.772	1
MEFV	1q-Amp	0.772	1
OR6C65	VEZF1	0.772	1
PIK3R1	PTPN14	0.772	1
PIK3R1	1q-Amp	0.772	1
PTPN14	VEZF1	0.772	1
TP53	11p-Del	0.772	1
3q-Amp	Del_17q25.3	0.772	1
EP300	11q-Del	0.773	1
EP300	Del_7q36.1	0.773	1
EP300	Del_19p13.3	0.773	1
HLA-B	MLL4	0.773	1
MLL4	Del_17q25.3	0.773	1
THSD7A	20q-Amp	0.773	1
ZNF750	Amp_9p23	0.773	1
20p-Amp	Amp_7p11.2	0.773	1
20q-Amp	Del_1p36.21	0.773	1
20q-Amp	Del_4q21.3	0.773	1
3p-Del	Amp_13q22.1	0.773	1
Amp_2q11.2	Amp_9p24.1	0.773	1
Amp_2q31.2	Del_17q25.3	0.773	1
Amp_6q12	Amp_9p24.1	0.773	1
Amp_6q12	Del_16q23.1	0.773	1
Amp_12q15	Del_4p15.2	0.773	1
Amp_12q15	Del_5q12.1	0.773	1
CREBBP	Del_8p23.2	0.774	1
EP300	SMAD4	0.774	1
EP300	15q-Del	0.774	1
EP300	Amp_17q12	0.774	1
KRT17	ZNF750	0.774	1
NAP1L2	NLRP8	0.774	1
NAP1L2	7q-Amp	0.774	1
NAP1L2	Xp-Del	0.774	1
NLRP8	TIGD4	0.774	1
NLRP8	ZNF233	0.774	1
NOTCH1	Amp_8q11.21	0.774	1
PTEN	Del_3p26.2	0.774	1
SMAD4	Del_10q23.31	0.774	1
TIGD4	7q-Amp	0.774	1
TIGD4	9q-Del	0.774	1
TIGD4	Amp_15q26.3	0.774	1
TIGD4	Del_2q21.2	0.774	1
ZNF233	9q-Del	0.774	1
ZNF233	Amp_15q26.3	0.774	1
ZNF233	Del_2q21.2	0.774	1
15q-Del	Del_10q23.31	0.774	1
8p-Del	Amp_5p15.33	0.774	1
Amp_5p15.33	Del_21q22.3	0.774	1
Amp_9p24.1	Del_10p11.21	0.774	1
Amp_13q22.1	Del_3p14.2	0.774	1
Del_10p11.21	Del_16q23.1	0.774	1
BRAF	PTEN	0.775	1
BRAF	3q-Del	0.775	1
EP300	KEAP1	0.775	1
HUWE1	20p-Amp	0.775	1
HUWE1	5q-Del	0.775	1
JUB	Amp_7q21.3	0.775	1
MAPK1	RAC1	0.775	1
MAPK1	3q-Del	0.775	1
MEFV	Del_5q35.3	0.775	1
NUDT11	PTEN	0.775	1
NUDT11	RAC1	0.775	1
PIK3R1	Del_5q35.3	0.775	1
VEZF1	Del_5q35.3	0.775	1
9q-Amp	Del_10q23.31	0.775	1
8p-Del	Amp_18q11.2	0.775	1
GAGE2A	21q-Del	0.776	1
PIK3CA	Del_14q32.32	0.776	1
SMAD4	3q-Amp	0.776	1
21q-Del	Del_16q23.3	0.776	1
Amp_6p12.1	Del_4q22.1	0.776	1
Amp_6p12.1	Del_10p15.3	0.776	1
Amp_9p13.3	Del_4q21.3	0.776	1
Amp_12p13.33	Del_1p36.21	0.776	1
Amp_12p13.33	Del_4q21.3	0.776	1
ASXL1	Del_8p23.2	0.777	1
CUL3	Del_8p23.2	0.777	1
IRS4	Del_8p23.2	0.777	1
PTPN14	Del_3p14.2	0.777	1
THSD7A	Amp_11p13	0.777	1
Amp_9p13.3	Del_9p21.3	0.777	1
Del_3p12.1	Del_Xq21.33	0.777	1
CDKN2A	NFE2L2	0.778	1
CUL3	Amp_9p13.3	0.778	1
EMG1	Amp_11q13.3	0.778	1
IRS4	Amp_12p13.33	0.778	1
NLRP8	11p-Del	0.778	1
NLRP8	Amp_18p11.31	0.778	1
NOTCH1	20q-Amp	0.778	1
PTPN14	Amp_12p13.33	0.778	1
1q-Amp	Amp_12p13.33	0.778	1
5p-Amp	Amp_2q11.2	0.778	1
5p-Amp	Amp_6q12	0.778	1
7q-Amp	11p-Del	0.778	1
7q-Amp	Amp_18p11.31	0.778	1
11p-Del	Xp-Del	0.778	1
11p-Del	Del_2q21.2	0.778	1
9q-Del	Amp_12q15	0.778	1
9q-Del	Del_6p25.3	0.778	1
Xp-Del	Del_9q21.11	0.778	1
Amp_11q13.3	Del_1q44	0.778	1
Amp_18p11.31	Del_2q21.2	0.778	1
FGFR3	HUWE1	0.779	1
HUWE1	RHOA	0.779	1
ASXL1	12p-Amp	0.78	1
EMG1	Amp_9p23	0.78	1
EMG1	Del_16q23.3	0.78	1
IRS4	12p-Amp	0.78	1
IRS4	Del_14q32.32	0.78	1
NLRP8	Del_4q22.1	0.78	1
OR6C65	12p-Amp	0.78	1
PIK3CA	Del_13q14.2	0.78	1
PTEN	Del_Xp21.3	0.78	1
PTPN14	Del_14q32.32	0.78	1
RAC1	THSD7A	0.78	1
RAC1	Del_1p36.21	0.78	1
RAC1	Del_4q21.3	0.78	1
Xp-Del	Del_10p15.3	0.78	1
Amp_9p23	Del_1q44	0.78	1
Amp_15q26.3	Del_10p15.3	0.78	1
Del_1q44	Del_16q23.3	0.78	1
CREBBP	11p-Del	0.781	1
CREBBP	Del_6p25.3	0.781	1
CREBBP	Del_9q21.11	0.781	1
FBXW7	Amp_12q15	0.781	1
FBXW7	Del_10p11.21	0.781	1
KEAP1	4p-Del	0.781	1
NAP1L2	9p-Del	0.781	1
TP53	Amp_13q22.1	0.781	1
14q-Amp	Amp_20q11.22	0.781	1
7p-Amp	Amp_12q15	0.781	1
7p-Amp	Del_9q21.11	0.781	1
7p-Amp	Del_10p11.21	0.781	1
9q-Amp	4p-Del	0.781	1
Amp_5p15.33	Amp_9p23	0.781	1
Amp_8p11.23	Del_16q23.1	0.781	1
Amp_20q11.22	Del_3p26.2	0.781	1
GAGE2A	HRAS	0.782	1
GAGE2A	8p-Amp	0.782	1
HRAS	KRTAP5-5	0.782	1
KRTAP5-5	4q-Del	0.782	1
PTEN	Amp_20q11.22	0.782	1
Amp_17q12	Amp_18p11.31	0.782	1
ADAM19	ZNF623	0.783	1
KIAA1267	ZNF623	0.783	1
SMAD4	20p-Amp	0.783	1
SMAD4	Amp_18q11.2	0.783	1
20p-Amp	15q-Del	0.783	1
20p-Amp	Del_13q14.2	0.783	1
5q-Del	Amp_17q12	0.783	1
Amp_18q11.2	Del_13q14.2	0.783	1
DYSF	KRT17	0.784	1
JUB	Del_Xq21.33	0.784	1
KRT17	Amp_2q11.2	0.784	1
KRT17	Amp_6q12	0.784	1
KRT17	Amp_13q34	0.784	1
KRT17	Del_7q31.1	0.784	1
MLL2	Amp_18q11.2	0.784	1
NSD1	Del_Xp22.2	0.784	1
RB1	Amp_11p13	0.784	1
20p-Amp	4p-Del	0.784	1
11p-Del	Amp_7q21.3	0.784	1
18q-Del	Del_17q25.3	0.784	1
C3orf59	15q-Del	0.785	1
C3orf59	Amp_17q12	0.785	1
CDKN2A	20q-Amp	0.785	1
CREBBP	20p-Amp	0.785	1
CREBBP	Amp_18q11.2	0.785	1
DYSF	9q-Amp	0.785	1
FGFR3	SMAD4	0.785	1
FGFR3	15q-Del	0.785	1
FGFR3	Amp_17q12	0.785	1
HLA-A	Amp_2q11.2	0.785	1
HLA-A	Amp_13q34	0.785	1
HLA-A	Del_7q31.1	0.785	1
NOTCH1	RAC1	0.785	1
RHOA	SMAD4	0.785	1
RHOA	Amp_17q12	0.785	1
ZNF623	Amp_8q24.21	0.785	1
20p-Amp	7p-Amp	0.785	1
20p-Amp	13q-Del	0.785	1
20q-Amp	Del_1q44	0.785	1
20q-Amp	Del_16q23.1	0.785	1
8q-Amp	Del_5q12.1	0.785	1
9q-Amp	Amp_2q11.2	0.785	1
Amp_11q13.3	Del_13q14.2	0.785	1
Del_2q21.2	Del_9p21.3	0.785	1
ADAM19	Amp_9p23	0.786	1
BRAF	Amp_7q21.3	0.786	1
C3orf59	11q-Del	0.786	1
C3orf59	Del_19p13.3	0.786	1
FGFR3	Del_7q36.1	0.786	1
JUB	TGFBR2	0.786	1
JUB	Del_17q25.3	0.786	1
KDM6A	NAP1L2	0.786	1
KDM6A	ZNF233	0.786	1
KIAA1267	Del_16q23.3	0.786	1
MAPK1	Amp_7q21.3	0.786	1
NAP1L2	RASA1	0.786	1
NAP1L2	RB1	0.786	1
RASA1	TIGD4	0.786	1
RASA1	ZNF233	0.786	1
RB1	TIGD4	0.786	1
RB1	ZNF233	0.786	1
RHOA	Del_19p13.3	0.786	1
20q-Amp	Del_2q22.1	0.786	1
Xp-Del	Del_13q14.2	0.786	1
Amp_8q11.21	Amp_17q12	0.786	1
Amp_15q26.3	Del_13q14.2	0.786	1
Del_5q12.1	Del_19p13.3	0.786	1
Del_17q25.3	Del_Xp22.2	0.786	1
ASXL1	18q-Del	0.787	1
IRS4	18q-Del	0.787	1
PTPN14	18q-Del	0.787	1
THSD7A	Del_10q23.31	0.787	1
3q-Amp	Del_4q35.2	0.787	1
5p-Amp	Del_3p12.1	0.787	1
8q-Amp	Del_16q23.3	0.787	1
Del_11p15.5	Del_Xp21.3	0.787	1
FAT1	Del_8p23.2	0.788	1
KDM6A	Del_11q23.1	0.788	1
RB1	Del_11q23.1	0.788	1
8p-Del	Amp_6p12.1	0.788	1
Amp_5p12	Del_8p23.2	0.788	1
Del_3p24.1	Del_Xq21.33	0.788	1
BRAF	Del_Xq21.33	0.789	1
CDKN2A	GAGE2A	0.789	1
CDKN2A	KRTAP5-5	0.789	1
FAT1	KRTAP5-5	0.789	1
FGFR3	Amp_5p12	0.789	1
HRAS	NFE2L2	0.789	1
KRTAP5-5	Del_14q11.2	0.789	1
MAPK1	Del_Xq21.33	0.789	1
NFE2L2	8p-Amp	0.789	1
NUDT11	Del_Xq21.33	0.789	1
PIK3R1	Amp_8q11.21	0.789	1
SMAD4	Del_4p16.3	0.789	1
SMAD4	Del_4q35.2	0.789	1
VEZF1	Amp_8q11.21	0.789	1
20q-Amp	9p-Del	0.789	1
11q-Del	Amp_18q11.2	0.789	1
5q-Del	Del_19p13.3	0.789	1
Amp_12q15	Del_9p21.3	0.789	1
Amp_17q12	Del_4p16.3	0.789	1
Amp_18q11.2	Del_7q36.1	0.789	1
EMG1	EP300	0.79	1
EMG1	Del_10q23.31	0.79	1
EMG1	Del_11p15.5	0.79	1
EP300	Del_1q44	0.79	1
HUWE1	9q-Del	0.79	1
KRT17	Del_13q12.11	0.79	1
PTEN	21q-Del	0.79	1
RAC1	21q-Del	0.79	1
7p-Amp	Amp_8q11.21	0.79	1
21q-Del	3q-Del	0.79	1
8p-Del	Del_2q21.2	0.79	1
Del_1q44	Del_10q23.31	0.79	1
Del_1q44	Del_11p15.5	0.79	1
Del_2q21.2	Del_21q22.3	0.79	1
Del_4q35.2	Del_17q25.3	0.79	1
HLA-B	Amp_15q26.3	0.791	1
HLA-B	Del_2q21.2	0.791	1
NLRP8	Del_17q25.3	0.791	1
PIK3CA	Del_2q21.2	0.791	1
TGFBR2	9q-Del	0.791	1
TGFBR2	Amp_15q26.3	0.791	1
ASXL1	NFE2L2	0.792	1
FAT1	Del_2q36.2	0.792	1
IRS4	NFE2L2	0.792	1
NFE2L2	OR6C65	0.792	1
NFE2L2	1q-Amp	0.792	1
PTPN14	Amp_6p12.1	0.792	1
ASXL1	Del_3p12.1	0.793	1
HUWE1	8q-Amp	0.793	1
5p-Amp	Amp_13q22.1	0.793	1
ADAM19	FAT1	0.794	1
HRAS	Amp_9p23	0.794	1
KIAA1267	20q-Amp	0.794	1
PIK3CA	Del_2q36.2	0.794	1
THSD7A	Del_6p25.3	0.794	1
ZNF623	20q-Amp	0.794	1
7q-Amp	Del_5q15	0.794	1
11p-Del	Del_Xp21.3	0.794	1
Xp-Del	Del_4p15.2	0.794	1
Amp_12p13.33	Del_18q23	0.794	1
Amp_12q15	Del_4q21.3	0.794	1
Amp_13q22.1	Del_Xq21.33	0.794	1
Amp_20q11.22	Del_5q35.3	0.794	1
Amp_Xq28	Del_13q12.11	0.794	1
Del_2q21.2	Del_5q12.1	0.794	1
Del_2q21.2	Del_5q15	0.794	1
GAGE2A	12p-Amp	0.795	1
GAGE2A	14q-Amp	0.795	1
GAGE2A	Del_14q32.32	0.795	1
KRTAP5-5	12p-Amp	0.795	1
KRTAP5-5	14q-Amp	0.795	1
KRTAP5-5	Del_14q32.32	0.795	1
KRTAP5-5	Del_18q23	0.795	1
PIK3CA	Amp_12p13.33	0.795	1
SMAD4	Del_4p15.2	0.795	1
SMAD4	Del_5q15	0.795	1
TP53	Amp_8p11.23	0.795	1
14q-Amp	Del_13q12.11	0.795	1
5p-Amp	Del_2q36.2	0.795	1
11p-Del	Amp_5p12	0.795	1
Amp_5p12	Amp_12q15	0.795	1
Amp_5p12	Del_6p25.3	0.795	1
Amp_6q12	Amp_8q11.21	0.795	1
Amp_6q12	Amp_9p23	0.795	1
Amp_6q12	Del_16q23.3	0.795	1
Amp_8p11.23	Amp_Xq28	0.795	1
Amp_8p11.23	Del_Xp22.2	0.795	1
Amp_17q12	Del_4p15.2	0.795	1
Amp_17q12	Del_5q12.1	0.795	1
ASXL1	Del_10p11.21	0.796	1
DYSF	Amp_7p11.2	0.796	1
EMG1	20p-Amp	0.796	1
EMG1	Amp_18q11.2	0.796	1
KDM6A	Del_2q36.2	0.796	1
MLL4	Amp_9p24.1	0.796	1
RASA1	Del_2q36.2	0.796	1
1q-Amp	Del_10p11.21	0.796	1
20p-Amp	Del_1q44	0.796	1
5q-Del	Del_1q44	0.796	1
Amp_2q11.2	Amp_8p11.23	0.796	1
Amp_3q26.33	Amp_13q22.1	0.796	1
Amp_7p11.2	Amp_13q34	0.796	1
Amp_11p13	Del_4q22.1	0.796	1
Amp_11p13	Del_10p15.3	0.796	1
Amp_11q13.3	Amp_Xq28	0.796	1
Del_3p26.2	Del_14q32.32	0.796	1
ASXL1	NAP1L2	0.797	1
ASXL1	TIGD4	0.797	1
CUL3	NAP1L2	0.797	1
CUL3	TIGD4	0.797	1
IRS4	NAP1L2	0.797	1
IRS4	TIGD4	0.797	1
KDM6A	11p-Del	0.797	1
KDM6A	Amp_12q15	0.797	1
KDM6A	Del_9q21.11	0.797	1
MEFV	PTEN	0.797	1
MEFV	RAC1	0.797	1
MEFV	3q-Del	0.797	1
MLL2	Amp_9p24.1	0.797	1
MLL2	Del_16q23.1	0.797	1
NAP1L2	OR6C65	0.797	1
NAP1L2	PTPN14	0.797	1
NAP1L2	1q-Amp	0.797	1
NSD1	TIGD4	0.797	1
OR6C65	ZNF233	0.797	1
PIK3R1	RAC1	0.797	1
PIK3R1	3q-Del	0.797	1
PTEN	VEZF1	0.797	1
PTPN14	TIGD4	0.797	1
PTPN14	ZNF233	0.797	1
RAC1	VEZF1	0.797	1
RASA1	Del_9q21.11	0.797	1
RB1	Del_9q21.11	0.797	1
TIGD4	1q-Amp	0.797	1
5p-Amp	3p-Del	0.797	1
8p-Amp	Del_3p24.1	0.797	1
Amp_9p23	Amp_11q13.3	0.797	1
EPHA2	3q-Amp	0.798	1
7p-Amp	Del_3p12.1	0.798	1
Amp_11q13.3	Del_10p15.3	0.798	1
C3orf59	MLL2	0.799	1
CASP8	PIK3R1	0.799	1
HLA-B	7p-Amp	0.799	1
HLA-B	8q-Amp	0.799	1
HLA-B	Del_5q12.1	0.799	1
HLA-B	Del_5q15	0.799	1
HUWE1	8p-Del	0.799	1
MAPK1	Del_2q36.2	0.799	1
MEFV	Del_2q22.1	0.799	1
MLL4	8q-Amp	0.799	1
NFE2L2	11q-Del	0.799	1
NFE2L2	Del_7q36.1	0.799	1
NLRP8	11q-Del	0.799	1
NLRP8	Del_19p13.3	0.799	1
NUDT11	Del_1p13.2	0.799	1
NUDT11	Del_2q36.2	0.799	1
PIK3CA	THSD7A	0.799	1
PIK3CA	Del_1p36.21	0.799	1
TGFBR2	7p-Amp	0.799	1
TGFBR2	Del_5q15	0.799	1
7q-Amp	11q-Del	0.799	1
7q-Amp	Del_7q36.1	0.799	1
11q-Del	Del_2q21.2	0.799	1
13q-Del	Del_17q25.3	0.799	1
5q-Del	Amp_8q11.21	0.799	1
Xp-Del	Del_19p13.3	0.799	1
Amp_15q26.3	Del_7q36.1	0.799	1
Amp_15q26.3	Del_19p13.3	0.799	1
DYSF	ZNF750	0.8	1
RASA1	Del_3p26.2	0.8	1
RB1	Del_3p26.2	0.8	1
THSD7A	Del_10p11.21	0.8	1
ZNF750	Amp_2q11.2	0.8	1
ZNF750	Amp_6q12	0.8	1
ZNF750	Amp_13q34	0.8	1
Amp_18p11.31	Del_16q23.1	0.8	1
Amp_Xq28	Del_1p13.2	0.8	1
Del_1p13.2	Del_Xp22.2	0.8	1
Del_2q36.2	Del_Xp22.2	0.8	1
Del_4q22.1	Del_19p13.3	0.8	1
C3orf59	ZNF623	0.801	1
C3orf59	Del_16q23.1	0.801	1
FGFR3	KIAA1267	0.801	1
FGFR3	ZNF623	0.801	1
FGFR3	Del_16q23.1	0.801	1
NSD1	Del_Xq21.33	0.801	1
RAC1	4q-Del	0.801	1
RB1	3q-Amp	0.801	1
RHOA	ZNF623	0.801	1
RHOA	Amp_9p24.1	0.801	1
THSD7A	20p-Amp	0.801	1
THSD7A	5q-Del	0.801	1
5p-Amp	Del_3p26.2	0.801	1
15q-Del	Amp_2q31.2	0.801	1
Amp_2q31.2	Amp_17q12	0.801	1
Amp_11q13.3	Amp_12p13.33	0.801	1
Amp_11q13.3	Amp_12q15	0.801	1
Amp_11q13.3	Del_6p25.3	0.801	1
Amp_18q11.2	Del_1p36.21	0.801	1
Amp_18q11.2	Del_4q21.3	0.801	1
Del_2q22.1	Del_3p14.2	0.801	1
EP300	NOTCH1	0.802	1
GAGE2A	NFE2L2	0.802	1
GAGE2A	Amp_6p12.1	0.802	1
HLA-A	MLL4	0.802	1
KRTAP5-5	NFE2L2	0.802	1
KRTAP5-5	Amp_6p12.1	0.802	1
MEFV	Amp_8q24.21	0.802	1
MLL4	9q-Amp	0.802	1
NOTCH1	14q-Amp	0.802	1
TGFBR2	Amp_8q11.21	0.802	1
ZNF750	Amp_5p15.33	0.802	1
20q-Amp	Del_3p26.2	0.802	1
4q-Del	Amp_5p12	0.802	1
Amp_8q11.21	Del_17q25.3	0.802	1
Del_5q35.3	Del_14q32.32	0.802	1
ADAM19	EP300	0.803	1
ASXL1	Amp_11p13	0.803	1
EP300	KIAA1267	0.803	1
EP300	ZNF623	0.803	1
IRS4	Amp_11p13	0.803	1
KRT17	NLRP8	0.803	1
KRT17	7q-Amp	0.803	1
KRT17	9q-Del	0.803	1
KRT17	Xp-Del	0.803	1
KRT17	Amp_15q26.3	0.803	1
KRT17	Del_2q21.2	0.803	1
NFE2L2	Del_14q11.2	0.803	1
OR6C65	Amp_11p13	0.803	1
PTPN14	Amp_11p13	0.803	1
TIGD4	Amp_8p11.23	0.803	1
12p-Amp	Del_14q32.32	0.803	1
20q-Amp	Del_18q23	0.803	1
Amp_6p12.1	Amp_20q11.22	0.803	1
Amp_7p11.2	Amp_12q15	0.803	1
ASXL1	Amp_7q21.3	0.804	1
BRAF	SMAD4	0.804	1
BRAF	15q-Del	0.804	1
BRAF	Amp_17q12	0.804	1
MAPK1	SMAD4	0.804	1
MAPK1	15q-Del	0.804	1
NSD1	Amp_13q22.1	0.804	1
NUDT11	SMAD4	0.804	1
NUDT11	15q-Del	0.804	1
NUDT11	Amp_17q12	0.804	1
OR6C65	Del_3p24.1	0.804	1
PTPN14	Del_3p24.1	0.804	1
14q-Amp	Del_16q23.1	0.804	1
8q-Amp	3q-Del	0.804	1
21q-Del	Amp_8q24.21	0.804	1
3p-Del	Amp_6p12.1	0.804	1
4q-Del	Del_2q22.1	0.804	1
9p-Del	Amp_9p13.3	0.804	1
Amp_8q11.21	Del_4q35.2	0.804	1
DYSF	20q-Amp	0.805	1
EPHA2	NLRP8	0.805	1
EPHA2	Amp_15q26.3	0.805	1
HRAS	Amp_11p13	0.805	1
KDM6A	Del_4q22.1	0.805	1
KDM6A	Del_10p15.3	0.805	1
MEFV	Amp_9p13.3	0.805	1
PIK3R1	Amp_12p13.33	0.805	1
VEZF1	Amp_12p13.33	0.805	1
20q-Amp	Amp_6q12	0.805	1
20q-Amp	Del_7q31.1	0.805	1
8p-Amp	Amp_11p13	0.805	1
Amp_8q11.21	Del_10p11.21	0.805	1
Del_1p13.2	Del_6p25.3	0.805	1
EMG1	Amp_2q31.2	0.806	1
NUDT11	Del_4q22.1	0.806	1
ZNF750	4p-Del	0.806	1
Amp_2q31.2	Del_1q44	0.806	1
Amp_5p15.33	Del_2q22.1	0.806	1
Amp_5p12	Del_10p15.3	0.806	1
MLL2	Amp_8q24.21	0.807	1
ZNF750	5q-Del	0.807	1
5p-Amp	Del_13q14.2	0.807	1
Amp_8q24.21	Del_6p25.3	0.807	1
CDKN2A	Amp_5p15.33	0.808	1
FAT1	Amp_5p15.33	0.808	1
NAP1L2	Amp_20q11.22	0.808	1
21q-Del	Del_9q21.11	0.808	1
3p-Del	Del_Xq21.33	0.808	1
Amp_9p23	Del_10p11.21	0.808	1
Del_10p11.21	Del_16q23.3	0.808	1
GAGE2A	Amp_11p13	0.809	1
HLA-B	RB1	0.809	1
KDM6A	Amp_18p11.31	0.809	1
KRTAP5-5	Amp_11p13	0.809	1
MLL2	Del_1p13.2	0.809	1
RASA1	Del_17q25.3	0.809	1
RB1	Amp_18p11.31	0.809	1
RB1	Del_17q25.3	0.809	1
12p-Amp	Amp_8q11.21	0.809	1
5p-Amp	Del_3p24.1	0.809	1
Amp_2q31.2	Del_3p26.2	0.809	1
Amp_18p11.31	Del_14q11.2	0.809	1
CASP8	9q-Amp	0.81	1
FAT1	JUB	0.81	1
FAT1	4q-Del	0.81	1
HLA-A	Del_2q22.1	0.81	1
JUB	SMAD4	0.81	1
JUB	Amp_17q12	0.81	1
KEAP1	Amp_2q31.2	0.81	1
KEAP1	Del_2q22.1	0.81	1
MEFV	Del_Xq21.33	0.81	1
NLRP8	TP53	0.81	1
SMAD4	Amp_Xq28	0.81	1
TP53	Amp_15q26.3	0.81	1
VEZF1	Del_Xq21.33	0.81	1
Amp_5p12	Del_13q14.2	0.81	1
Amp_17q12	Del_Xp22.2	0.81	1
ADAM19	20p-Amp	0.811	1
ADAM19	Amp_18q11.2	0.811	1
ASXL1	Del_13q12.11	0.811	1
CDKN2A	EP300	0.811	1
EMG1	Amp_Xq28	0.811	1
EMG1	Del_Xp22.2	0.811	1
HLA-B	THSD7A	0.811	1
HLA-B	10p-Del	0.811	1
HLA-B	Del_1p36.21	0.811	1
KIAA1267	20p-Amp	0.811	1
KIAA1267	Amp_18q11.2	0.811	1
NOTCH1	9q-Del	0.811	1
NOTCH1	Del_2q21.2	0.811	1
RAC1	Del_14q11.2	0.811	1
TGFBR2	10p-Del	0.811	1
TGFBR2	Del_4q21.3	0.811	1
VEZF1	18q-Del	0.811	1
ZNF623	20p-Amp	0.811	1
ZNF623	Amp_18q11.2	0.811	1
Del_1q44	Del_Xp22.2	0.811	1
KEAP1	PIK3CA	0.812	1
5p-Amp	Del_10p15.3	0.812	1
10p-Del	Amp_7q21.3	0.812	1
Amp_7q21.3	Del_1p36.21	0.812	1
Amp_9p24.1	Del_4q35.2	0.812	1
BRAF	HUWE1	0.813	1
JUB	Amp_Xq28	0.813	1
KDM6A	KRT17	0.813	1
KRT17	RASA1	0.813	1
KRT17	RB1	0.813	1
KRT17	Del_4p16.3	0.813	1
KRT17	Del_13q14.2	0.813	1
MAPK1	Del_21q22.3	0.813	1
Amp_2q31.2	Amp_18p11.31	0.813	1
Del_4q22.1	Del_Xp22.2	0.813	1
KRTAP5-5	Amp_8q11.21	0.814	1
RASA1	Del_21q22.3	0.814	1
RB1	Del_21q22.3	0.814	1
THSD7A	5p-Amp	0.814	1
20q-Amp	Del_16q23.3	0.814	1
5p-Amp	Del_2q22.1	0.814	1
7p-Amp	Del_3p24.1	0.814	1
8q-Amp	Del_7q36.1	0.814	1
11q-Del	Del_21q22.3	0.814	1
Amp_3q26.33	Amp_9p23	0.814	1
Amp_13q22.1	Del_3p24.1	0.814	1
Amp_Xq28	Del_9p21.3	0.814	1
ASXL1	11p-Del	0.815	1
ASXL1	Del_6p25.3	0.815	1
ASXL1	Del_9q21.11	0.815	1
CUL3	11p-Del	0.815	1
CUL3	Del_9q21.11	0.815	1
DYSF	Amp_6q12	0.815	1
DYSF	Amp_13q34	0.815	1
IRS4	Del_9q21.11	0.815	1
OR6C65	11p-Del	0.815	1
VEZF1	Amp_5p15.33	0.815	1
1q-Amp	Del_9q21.11	0.815	1
20q-Amp	Del_13q12.11	0.815	1
18q-Del	Amp_5p12	0.815	1
Amp_2q11.2	Amp_13q34	0.815	1
Amp_Xq28	Del_11q23.1	0.815	1
CREBBP	Del_13q12.11	0.816	1
CUL3	Amp_11q13.3	0.816	1
DYSF	Del_10q23.31	0.816	1
EMG1	FBXW7	0.816	1
EMG1	7p-Amp	0.816	1
EMG1	13q-Del	0.816	1
EMG1	Amp_13q22.1	0.816	1
FBXW7	Del_1q44	0.816	1
FBXW7	Del_13q12.11	0.816	1
FGFR3	Del_16q23.3	0.816	1
GAGE2A	Del_9q21.11	0.816	1
KDM6A	Del_4q35.2	0.816	1
KRTAP5-5	11p-Del	0.816	1
KRTAP5-5	Amp_12q15	0.816	1
KRTAP5-5	Del_6p25.3	0.816	1
KRTAP5-5	Del_9q21.11	0.816	1
MLL4	Amp_9p23	0.816	1
OR6C65	Amp_11q13.3	0.816	1
RASA1	Del_4p16.3	0.816	1
RASA1	Del_13q14.2	0.816	1
SMAD4	Del_3p14.2	0.816	1
7p-Amp	Del_1q44	0.816	1
13q-Del	Del_1q44	0.816	1
Amp_13q22.1	Del_1q44	0.816	1
Amp_18q11.2	Del_16q23.1	0.816	1
Del_6p25.3	Del_10p15.3	0.816	1
Del_7q31.1	Del_11p15.5	0.816	1
C3orf59	FGFR3	0.817	1
FBXW7	Del_1p13.2	0.817	1
KRT17	Del_4p15.2	0.817	1
NFE2L2	14q-Amp	0.817	1
7p-Amp	Del_1p13.2	0.817	1
15q-Del	Amp_5p15.33	0.817	1
Amp_5p12	Amp_9p23	0.817	1
Amp_6p12.1	Del_14q32.32	0.817	1
Amp_13q22.1	Del_2q36.2	0.817	1
CDKN2A	NLRP8	0.818	1
CDKN2A	Xp-Del	0.818	1
CDKN2A	Amp_15q26.3	0.818	1
FAT1	NAP1L2	0.818	1
FAT1	TIGD4	0.818	1
FAT1	ZNF233	0.818	1
FAT1	Amp_15q26.3	0.818	1
FAT1	Del_10p11.21	0.818	1
KEAP1	7q-Amp	0.818	1
KEAP1	Xp-Del	0.818	1
KEAP1	Amp_15q26.3	0.818	1
NLRP8	9q-Amp	0.818	1
NSD1	TP53	0.818	1
TIGD4	Del_5q35.3	0.818	1
ZNF233	Del_5q35.3	0.818	1
7q-Amp	9q-Amp	0.818	1
7q-Amp	Amp_9p24.1	0.818	1
7q-Amp	Del_16q23.1	0.818	1
9q-Amp	Xp-Del	0.818	1
9q-Amp	Amp_15q26.3	0.818	1
9q-Amp	Del_2q21.2	0.818	1
9q-Del	Amp_9p24.1	0.818	1
Xp-Del	Amp_9p24.1	0.818	1
Xp-Del	Del_16q23.1	0.818	1
Amp_15q26.3	Del_16q23.1	0.818	1
ADAM19	NUDT11	0.819	1
BRAF	Del_19p13.3	0.819	1
CREBBP	Amp_17q12	0.819	1
FBXW7	15q-Del	0.819	1
FBXW7	Amp_17q12	0.819	1
KIAA1267	NUDT11	0.819	1
MAPK1	ZNF623	0.819	1
NUDT11	11q-Del	0.819	1
NUDT11	Del_7q36.1	0.819	1
NUDT11	Del_19p13.3	0.819	1
8q-Amp	Amp_7q21.3	0.819	1
9q-Amp	Amp_12p13.33	0.819	1
13q-Del	15q-Del	0.819	1
15q-Del	Amp_13q22.1	0.819	1
Amp_7p11.2	Del_5q35.3	0.819	1
NAP1L2	PTEN	0.82	1
NAP1L2	RAC1	0.82	1
NAP1L2	3q-Del	0.82	1
PTEN	TIGD4	0.82	1
PTEN	ZNF233	0.82	1
TIGD4	3q-Del	0.82	1
ZNF233	3q-Del	0.82	1
ZNF623	Amp_18p11.31	0.82	1
20p-Amp	Del_2q22.1	0.82	1
5p-Amp	Del_4p15.2	0.82	1
5p-Amp	Del_5q15	0.82	1
8p-Amp	11p-Del	0.82	1
8p-Amp	Amp_12q15	0.82	1
4q-Del	Amp_12q15	0.82	1
Amp_18q11.2	Del_2q22.1	0.82	1
EMG1	10p-Del	0.821	1
EMG1	Del_1p36.21	0.821	1
EMG1	Del_4q21.3	0.821	1
EMG1	Del_Xp21.3	0.821	1
PTEN	12p-Amp	0.821	1
PTPN14	Del_1p13.2	0.821	1
THSD7A	Del_1q44	0.821	1
10p-Del	Del_1q44	0.821	1
Del_1p36.21	Del_1q44	0.821	1
Del_1q44	Del_4q21.3	0.821	1
Del_1q44	Del_Xp21.3	0.821	1
HLA-A	JUB	0.822	1
JUB	KEAP1	0.822	1
KDM6A	11q-Del	0.822	1
NSD1	Del_4q35.2	0.822	1
RASA1	Del_7q36.1	0.822	1
RASA1	Del_19p13.3	0.822	1
RB1	Del_7q36.1	0.822	1
9q-Amp	Amp_Xq28	0.822	1
9q-Amp	Del_Xp22.2	0.822	1
Amp_6p12.1	Amp_9p24.1	0.822	1
Del_3p26.2	Del_Xq21.33	0.822	1
FGFR3	20q-Amp	0.823	1
GAGE2A	HLA-B	0.823	1
GAGE2A	TGFBR2	0.823	1
GAGE2A	Del_17q25.3	0.823	1
HLA-B	KRTAP5-5	0.823	1
KDM6A	Del_5q12.1	0.823	1
KDM6A	Del_5q15	0.823	1
KRTAP5-5	TGFBR2	0.823	1
KRTAP5-5	Del_17q25.3	0.823	1
MEFV	Amp_7q21.3	0.823	1
RASA1	Del_5q12.1	0.823	1
RB1	Del_5q15	0.823	1
VEZF1	Amp_7q21.3	0.823	1
20q-Amp	Del_14q11.2	0.823	1
8p-Amp	Del_Xq21.33	0.823	1
Amp_2q31.2	Del_4q35.2	0.823	1
Amp_7p11.2	Del_4q35.2	0.823	1
Amp_8q11.21	Del_5q15	0.823	1
CUL3	KRT17	0.824	1
IRS4	KRT17	0.824	1
KEAP1	3q-Amp	0.824	1
KRT17	PTPN14	0.824	1
KRT17	1q-Amp	0.824	1
MEFV	SMAD4	0.824	1
MEFV	15q-Del	0.824	1
MEFV	Amp_17q12	0.824	1
PIK3R1	SMAD4	0.824	1
PIK3R1	15q-Del	0.824	1
SMAD4	VEZF1	0.824	1
VEZF1	15q-Del	0.824	1
VEZF1	Amp_17q12	0.824	1
Amp_11p13	Del_18q23	0.824	1
ASXL1	Del_11q23.1	0.825	1
HLA-B	Del_2q36.2	0.825	1
IRS4	Amp_5p15.33	0.825	1
JUB	Del_21q22.3	0.825	1
KDM6A	3p-Del	0.825	1
NAP1L2	Del_18q23	0.825	1
1q-Amp	Del_11q23.1	0.825	1
7p-Amp	Amp_20q11.22	0.825	1
8p-Del	Amp_Xq28	0.825	1
Amp_5p12	Del_21q22.3	0.825	1
Amp_13q22.1	Amp_20q11.22	0.825	1
ADAM19	Del_4p16.3	0.826	1
DYSF	20p-Amp	0.826	1
DYSF	5q-Del	0.826	1
DYSF	Amp_18q11.2	0.826	1
EPHA2	8q-Amp	0.826	1
KIAA1267	Del_4p16.3	0.826	1
KIAA1267	Del_4q35.2	0.826	1
NOTCH1	Del_1p13.2	0.826	1
20p-Amp	9p-Del	0.826	1
20p-Amp	Amp_6q12	0.826	1
20p-Amp	Del_7q31.1	0.826	1
8q-Amp	Del_14q32.32	0.826	1
5q-Del	Amp_6q12	0.826	1
8p-Del	Amp_12q15	0.826	1
Amp_5p15.33	Amp_9p13.3	0.826	1
Amp_12q15	Del_21q22.3	0.826	1
ADAM19	Amp_2q31.2	0.827	1
ASXL1	HLA-B	0.827	1
ASXL1	TGFBR2	0.827	1
CASP8	PTEN	0.827	1
CDKN2A	RAC1	0.827	1
CDKN2A	5p-Amp	0.827	1
CREBBP	JUB	0.827	1
CREBBP	8q-Amp	0.827	1
CREBBP	Amp_Xq28	0.827	1
CUL3	Del_17q25.3	0.827	1
FBXW7	8q-Amp	0.827	1
HLA-B	OR6C65	0.827	1
JUB	Amp_13q22.1	0.827	1
MLL2	Del_4q22.1	0.827	1
PTPN14	TGFBR2	0.827	1
TGFBR2	1q-Amp	0.827	1
THSD7A	Amp_17q12	0.827	1
12p-Amp	Del_8p23.2	0.827	1
14q-Amp	Del_8p23.2	0.827	1
3q-Amp	Del_16q23.3	0.827	1
5p-Amp	15q-Del	0.827	1
10p-Del	Amp_2q31.2	0.827	1
13q-Del	Del_Xp22.2	0.827	1
15q-Del	Del_Xp21.3	0.827	1
21q-Del	Del_1q44	0.827	1
3q-Del	Amp_7p11.2	0.827	1
Amp_2q31.2	Del_Xp21.3	0.827	1
Amp_17q12	Del_4q21.3	0.827	1
EPHA2	THSD7A	0.828	1
HLA-A	18q-Del	0.828	1
NSD1	Del_9q21.11	0.828	1
ZNF750	Amp_2q31.2	0.828	1
14q-Amp	Del_16q23.3	0.828	1
Amp_5p15.33	Del_14q11.2	0.828	1
Amp_9p23	Amp_20q11.22	0.828	1
Amp_9p23	Del_14q32.32	0.828	1
ASXL1	Del_10p15.3	0.829	1
EMG1	Del_3p14.2	0.829	1
EMG1	Del_8p23.2	0.829	1
EPHA2	KRTAP5-5	0.829	1
IRS4	Del_4q22.1	0.829	1
MLL2	Del_3p14.2	0.829	1
MLL4	Amp_8q11.21	0.829	1
OR6C65	Del_4q22.1	0.829	1
1q-Amp	Del_10p15.3	0.829	1
5p-Amp	Del_21q22.3	0.829	1
7q-Amp	Del_18q23	0.829	1
4p-Del	Amp_2q11.2	0.829	1
Amp_17q12	Del_3p12.1	0.829	1
Del_1q44	Del_8p23.2	0.829	1
MLL2	Del_3p26.2	0.83	1
MLL4	Amp_2q11.2	0.83	1
MLL4	Amp_6q12	0.83	1
5p-Amp	Del_11p15.5	0.83	1
8q-Amp	Amp_15q26.3	0.83	1
13q-Del	Amp_11q13.3	0.83	1
Amp_3q26.33	Amp_9p24.1	0.83	1
ADAM19	Del_4p15.2	0.831	1
ADAM19	Del_5q12.1	0.831	1
ADAM19	Del_5q15	0.831	1
C3orf59	EP300	0.831	1
C3orf59	Del_10q23.31	0.831	1
NFE2L2	PTEN	0.831	1
NFE2L2	RAC1	0.831	1
NLRP8	ZNF750	0.831	1
OR6C65	3q-Amp	0.831	1
ZNF750	Amp_15q26.3	0.831	1
12p-Amp	Amp_18p11.31	0.831	1
20p-Amp	4q-Del	0.831	1
3q-Del	Amp_6p12.1	0.831	1
4q-Del	Amp_18q11.2	0.831	1
EMG1	HRAS	0.832	1
EMG1	8p-Amp	0.832	1
EMG1	4q-Del	0.832	1
GAGE2A	Amp_5p15.33	0.832	1
GAGE2A	Del_11q23.1	0.832	1
HRAS	Del_1q44	0.832	1
KRTAP5-5	Amp_5p15.33	0.832	1
NAP1L2	Del_Xq21.33	0.832	1
NLRP8	5p-Amp	0.832	1
TIGD4	Del_Xq21.33	0.832	1
ZNF233	Del_Xq21.33	0.832	1
12p-Amp	Amp_11p13	0.832	1
14q-Amp	Amp_11p13	0.832	1
5p-Amp	7q-Amp	0.832	1
5p-Amp	9q-Del	0.832	1
5p-Amp	Amp_15q26.3	0.832	1
8p-Amp	Amp_11q13.3	0.832	1
8p-Amp	Del_1q44	0.832	1
4q-Del	Del_1q44	0.832	1
5q-Del	Amp_9p13.3	0.832	1
BRAF	Amp_9p24.1	0.833	1
FBXW7	KEAP1	0.833	1
HLA-A	NOTCH1	0.833	1
HUWE1	Amp_9p13.3	0.833	1
KEAP1	7p-Amp	0.833	1
NUDT11	Amp_9p24.1	0.833	1
NUDT11	Del_16q23.1	0.833	1
TP53	Del_13q12.11	0.833	1
5p-Amp	21q-Del	0.833	1
7p-Amp	9q-Amp	0.833	1
9q-Amp	13q-Del	0.833	1
3p-Del	Amp_8p11.23	0.833	1
Amp_7p11.2	Del_13q12.11	0.833	1
Amp_20q11.22	Del_1p13.2	0.833	1
BRAF	FGFR3	0.834	1
C3orf59	MAPK1	0.834	1
C3orf59	NUDT11	0.834	1
FGFR3	NUDT11	0.834	1
HLA-A	KDM6A	0.834	1
HLA-A	RB1	0.834	1
MEFV	Del_1p13.2	0.834	1
MEFV	Del_2q36.2	0.834	1
MLL2	Del_11q23.1	0.834	1
NUDT11	RHOA	0.834	1
PTEN	Amp_9p13.3	0.834	1
THSD7A	Del_2q36.2	0.834	1
VEZF1	Del_1p13.2	0.834	1
VEZF1	Del_2q36.2	0.834	1
3q-Del	Amp_12p13.33	0.834	1
Amp_3q26.33	Amp_13q34	0.834	1
Amp_8p11.23	Del_4q21.3	0.834	1
JUB	ZNF623	0.835	1
KIAA1267	Del_Xp22.2	0.835	1
NFE2L2	Amp_11q13.3	0.835	1
ZNF623	Amp_Xq28	0.835	1
ZNF623	Del_Xp22.2	0.835	1
3q-Amp	Amp_12p13.33	0.835	1
Amp_8q24.21	Del_21q22.3	0.835	1
C3orf59	Del_13q12.11	0.836	1
FAT1	7p-Amp	0.836	1
GAGE2A	HLA-A	0.836	1
HLA-A	KRTAP5-5	0.836	1
HRAS	TGFBR2	0.836	1
JUB	Del_7q36.1	0.836	1
KRTAP5-5	9q-Amp	0.836	1
SMAD4	21q-Del	0.836	1
15q-Del	21q-Del	0.836	1
21q-Del	Amp_17q12	0.836	1
4q-Del	Del_17q25.3	0.836	1
Xp-Del	Del_16q23.3	0.836	1
Amp_8p11.23	Del_13q14.2	0.836	1
Amp_12q15	Del_19p13.3	0.836	1
Amp_15q26.3	Del_16q23.3	0.836	1
Amp_Xq28	Del_19p13.3	0.836	1
Del_2q22.1	Del_19p13.3	0.836	1
ADAM19	PIK3R1	0.837	1
ADAM19	VEZF1	0.837	1
ASXL1	Del_21q22.3	0.837	1
EMG1	Del_14q11.2	0.837	1
IRS4	Del_21q22.3	0.837	1
KEAP1	Del_10p11.21	0.837	1
KIAA1267	PIK3R1	0.837	1
KIAA1267	VEZF1	0.837	1
MLL2	TGFBR2	0.837	1
PIK3R1	ZNF623	0.837	1
PTEN	Del_18q23	0.837	1
PTPN14	8p-Del	0.837	1
5p-Amp	Del_13q12.11	0.837	1
Amp_8q24.21	Amp_13q22.1	0.837	1
Amp_9p23	Amp_18p11.31	0.837	1
Amp_18p11.31	Del_16q23.3	0.837	1
Del_1q44	Del_14q11.2	0.837	1
Del_9p21.3	Del_11q23.1	0.837	1
CUL3	Amp_18p11.31	0.838	1
EPHA2	OR6C65	0.838	1
FGFR3	20p-Amp	0.838	1
FGFR3	5q-Del	0.838	1
OR6C65	Amp_18p11.31	0.838	1
SMAD4	Del_3p24.1	0.838	1
1q-Amp	Amp_18p11.31	0.838	1
4p-Del	Del_Xp22.2	0.838	1
CASP8	TIGD4	0.839	1
CASP8	ZNF233	0.839	1
FBXW7	Del_11q23.1	0.839	1
JUB	ZNF750	0.839	1
KRT17	5p-Amp	0.839	1
NSD1	Amp_15q26.3	0.839	1
ZNF750	Amp_Xq28	0.839	1
9q-Amp	Del_4p16.3	0.839	1
9q-Amp	Del_4q35.2	0.839	1
Amp_8p11.23	Amp_17q12	0.839	1
CREBBP	HUWE1	0.84	1
CREBBP	7p-Amp	0.84	1
CREBBP	13q-Del	0.84	1
CREBBP	Amp_13q22.1	0.84	1
EMG1	Del_3p24.1	0.84	1
EP300	NSD1	0.84	1
FBXW7	HUWE1	0.84	1
FBXW7	7p-Amp	0.84	1
MEFV	Del_4q22.1	0.84	1
NSD1	Del_21q22.3	0.84	1
PIK3R1	Del_10p15.3	0.84	1
PTPN14	Del_3p26.2	0.84	1
THSD7A	Amp_Xq28	0.84	1
VEZF1	3p-Del	0.84	1
7p-Amp	Amp_13q22.1	0.84	1
7p-Amp	Del_21q22.3	0.84	1
8q-Amp	Del_Xq21.33	0.84	1
13q-Del	Del_21q22.3	0.84	1
HUWE1	Amp_9p24.1	0.841	1
PTEN	Amp_11p13	0.841	1
ZNF750	Del_3p14.2	0.841	1
14q-Amp	Del_2q22.1	0.841	1
14q-Amp	Del_Xq21.33	0.841	1
20q-Amp	Del_11p15.5	0.841	1
Amp_6p12.1	Amp_8q24.21	0.841	1
Amp_18p11.31	Del_4q22.1	0.841	1
Del_14q32.32	Del_Xq21.33	0.841	1
EMG1	12p-Amp	0.842	1
EMG1	14q-Amp	0.842	1
EMG1	Del_14q32.32	0.842	1
12p-Amp	Del_1q44	0.842	1
14q-Amp	Del_1q44	0.842	1
8q-Amp	Del_2q22.1	0.842	1
3p-Del	Amp_2q31.2	0.842	1
Amp_9p23	Amp_18q11.2	0.842	1
Amp_Xq28	Del_4p16.3	0.842	1
Del_1q44	Del_14q32.32	0.842	1
Del_13q14.2	Del_Xp22.2	0.842	1
ADAM19	Amp_13q22.1	0.843	1
CREBBP	ZNF623	0.843	1
KIAA1267	13q-Del	0.843	1
KIAA1267	Amp_13q22.1	0.843	1
KRTAP5-5	ZNF750	0.843	1
NFE2L2	Amp_9p23	0.843	1
RASA1	9p-Del	0.843	1
ZNF623	Amp_13q22.1	0.843	1
18q-Del	Amp_18q11.2	0.843	1
Amp_5p15.33	Del_17q25.3	0.843	1
Amp_6p12.1	Amp_9p23	0.843	1
Amp_7q21.3	Del_1p13.2	0.843	1
Amp_20q11.22	Del_1p36.21	0.843	1
Del_2q22.1	Del_4q35.2	0.843	1
ASXL1	Del_4q35.2	0.844	1
DYSF	Xp-Del	0.844	1
DYSF	Amp_15q26.3	0.844	1
DYSF	Del_2q21.2	0.844	1
FAT1	Amp_5p12	0.844	1
HLA-A	THSD7A	0.844	1
HLA-A	10p-Del	0.844	1
HLA-B	8p-Del	0.844	1
IRS4	Del_4p16.3	0.844	1
KEAP1	THSD7A	0.844	1
KEAP1	Del_1p36.21	0.844	1
KRT17	PTEN	0.844	1
KRT17	RAC1	0.844	1
KRT17	3q-Del	0.844	1
MLL4	Del_5q35.3	0.844	1
NAP1L2	SMAD4	0.844	1
NAP1L2	15q-Del	0.844	1
NAP1L2	Amp_17q12	0.844	1
NLRP8	Amp_2q11.2	0.844	1
NLRP8	Amp_13q34	0.844	1
OR6C65	Del_4p16.3	0.844	1
OR6C65	Del_4q35.2	0.844	1
PTPN14	Del_4p16.3	0.844	1
PTPN14	Del_4q35.2	0.844	1
SMAD4	TIGD4	0.844	1
SMAD4	ZNF233	0.844	1
TIGD4	15q-Del	0.844	1
TIGD4	Amp_17q12	0.844	1
ZNF233	Amp_17q12	0.844	1
1q-Amp	Del_13q14.2	0.844	1
7q-Amp	Amp_2q11.2	0.844	1
7q-Amp	Amp_13q34	0.844	1
7q-Amp	Del_7q31.1	0.844	1
8p-Amp	15q-Del	0.844	1
9q-Amp	Del_1p36.21	0.844	1
9q-Amp	Del_4q21.3	0.844	1
15q-Del	4q-Del	0.844	1
9q-Del	Amp_2q11.2	0.844	1
Xp-Del	Amp_13q34	0.844	1
Xp-Del	Del_7q31.1	0.844	1
Amp_6q12	Amp_15q26.3	0.844	1
Amp_6q12	Del_2q21.2	0.844	1
Amp_8q24.21	Del_11q23.1	0.844	1
ASXL1	Del_19p13.3	0.845	1
BRAF	Amp_9p23	0.845	1
IRS4	11q-Del	0.845	1
IRS4	Del_7q36.1	0.845	1
NLRP8	20q-Amp	0.845	1
OR6C65	11q-Del	0.845	1
PTPN14	11q-Del	0.845	1
PTPN14	Del_19p13.3	0.845	1
14q-Amp	Amp_12q15	0.845	1
14q-Amp	Del_9q21.11	0.845	1
20q-Amp	Amp_15q26.3	0.845	1
11p-Del	Amp_20q11.22	0.845	1
15q-Del	Amp_20q11.22	0.845	1
Amp_12q15	Amp_20q11.22	0.845	1
Amp_20q11.22	Del_6p25.3	0.845	1
Del_9q21.11	Del_14q32.32	0.845	1
Del_10p15.3	Del_Xp21.3	0.845	1
HUWE1	MEFV	0.846	1
KEAP1	Del_4p15.2	0.846	1
NAP1L2	Amp_8q11.21	0.846	1
NLRP8	Amp_8p11.23	0.846	1
PIK3R1	Del_21q22.3	0.846	1
RB1	ZNF750	0.846	1
TIGD4	Amp_8q11.21	0.846	1
VEZF1	8p-Del	0.846	1
VEZF1	Del_21q22.3	0.846	1
14q-Amp	Del_3p12.1	0.846	1
20p-Amp	Del_14q11.2	0.846	1
8p-Amp	Del_3p26.2	0.846	1
Xp-Del	Amp_8p11.23	0.846	1
Amp_2q31.2	Amp_13q34	0.846	1
Amp_8p11.23	Del_2q21.2	0.846	1
Amp_18q11.2	Del_14q11.2	0.846	1
C3orf59	Amp_8q24.21	0.847	1
HLA-B	Del_14q11.2	0.847	1
PIK3CA	SMAD4	0.847	1
RAC1	Del_10p11.21	0.847	1
3p-Del	Amp_17q12	0.847	1
3q-Del	Del_10p11.21	0.847	1
Amp_12p13.33	Amp_18p11.31	0.847	1
Amp_12p13.33	Del_19p13.3	0.847	1
Del_14q11.2	Del_17q25.3	0.847	1
EMG1	NFE2L2	0.848	1
EMG1	Amp_6p12.1	0.848	1
KRT17	Del_3p26.2	0.848	1
NFE2L2	Del_1q44	0.848	1
TP53	8q-Amp	0.848	1
12p-Amp	Del_4p15.2	0.848	1
14q-Amp	Del_5q15	0.848	1
3q-Amp	Amp_8q11.21	0.848	1
Amp_6p12.1	Del_1q44	0.848	1
Amp_8p11.23	Del_4p15.2	0.848	1
Del_5q12.1	Del_14q32.32	0.848	1
BRAF	NUDT11	0.849	1
FBXW7	ZNF750	0.849	1
MAPK1	NUDT11	0.849	1
NAP1L2	18q-Del	0.849	1
NSD1	TGFBR2	0.849	1
PIK3CA	Amp_20q11.22	0.849	1
TIGD4	18q-Del	0.849	1
ZNF750	7p-Amp	0.849	1
14q-Amp	Amp_5p12	0.849	1
Xp-Del	Amp_5p12	0.849	1
Amp_5p12	Del_2q21.2	0.849	1
ADAM19	Del_1p36.21	0.85	1
ASXL1	KEAP1	0.85	1
ASXL1	9q-Amp	0.85	1
ASXL1	Del_5q12.1	0.85	1
DYSF	GAGE2A	0.85	1
DYSF	KRTAP5-5	0.85	1
EP300	14q-Amp	0.85	1
EP300	Amp_7q21.3	0.85	1
EPHA2	HRAS	0.85	1
GAGE2A	Amp_2q11.2	0.85	1
GAGE2A	Amp_6q12	0.85	1
GAGE2A	Amp_13q34	0.85	1
GAGE2A	Del_7q31.1	0.85	1
HLA-A	PTPN14	0.85	1
IRS4	KEAP1	0.85	1
IRS4	9q-Amp	0.85	1
KEAP1	1q-Amp	0.85	1
KIAA1267	THSD7A	0.85	1
KIAA1267	10p-Del	0.85	1
KIAA1267	Del_Xp21.3	0.85	1
KRTAP5-5	Amp_2q11.2	0.85	1
KRTAP5-5	Amp_6q12	0.85	1
KRTAP5-5	Amp_13q34	0.85	1
KRTAP5-5	Del_7q31.1	0.85	1
MLL2	Del_4p15.2	0.85	1
THSD7A	ZNF623	0.85	1
ZNF623	Del_Xp21.3	0.85	1
12p-Amp	Del_11p15.5	0.85	1
8q-Amp	Amp_6p12.1	0.85	1
18q-Del	Del_2q22.1	0.85	1
5q-Del	Amp_5p15.33	0.85	1
Amp_7q21.3	Del_11p15.5	0.85	1
Amp_8p11.23	Del_11p15.5	0.85	1
Amp_20q11.22	Del_4p16.3	0.85	1
Amp_20q11.22	Del_13q14.2	0.85	1
Del_3p14.2	Del_17q25.3	0.85	1
C3orf59	PIK3R1	0.851	1
C3orf59	VEZF1	0.851	1
FBXW7	Del_18q23	0.851	1
FGFR3	MEFV	0.851	1
FGFR3	PIK3R1	0.851	1
KEAP1	Amp_3q26.33	0.851	1
NFE2L2	Del_Xq21.33	0.851	1
PTEN	11p-Del	0.851	1
RAC1	11p-Del	0.851	1
7p-Amp	Del_7q36.1	0.851	1
7p-Amp	Del_19p13.3	0.851	1
13q-Del	Del_19p13.3	0.851	1
3q-Del	Del_9q21.11	0.851	1
4p-Del	Amp_11p13	0.851	1
Amp_8p11.23	Del_3p24.1	0.851	1
Amp_9p13.3	Del_3p12.1	0.851	1
Amp_11p13	Del_9p21.3	0.851	1
Amp_Xq28	Del_4p15.2	0.851	1
C3orf59	Amp_2q31.2	0.852	1
CREBBP	Amp_18p11.31	0.852	1
CREBBP	Del_1p36.21	0.852	1
CREBBP	Del_9p21.3	0.852	1
FBXW7	10p-Del	0.852	1
FGFR3	Amp_2q31.2	0.852	1
KRT17	Amp_20q11.22	0.852	1
MAPK1	20q-Amp	0.852	1
MEFV	NOTCH1	0.852	1
MEFV	Del_7q36.1	0.852	1
MEFV	Del_19p13.3	0.852	1
NOTCH1	VEZF1	0.852	1
PIK3R1	11q-Del	0.852	1
PIK3R1	Del_9p21.3	0.852	1
THSD7A	Amp_13q22.1	0.852	1
VEZF1	Del_7q36.1	0.852	1
VEZF1	Del_19p13.3	0.852	1
5p-Amp	4q-Del	0.852	1
7p-Amp	Del_1p36.21	0.852	1
7p-Amp	Del_Xp21.3	0.852	1
13q-Del	Del_Xp21.3	0.852	1
Amp_5p15.33	Del_14q32.32	0.852	1
Amp_13q22.1	Del_Xp21.3	0.852	1
Amp_13q34	Del_13q12.11	0.852	1
Amp_18q11.2	Del_13q12.11	0.852	1
EMG1	Amp_11p13	0.853	1
FAT1	RB1	0.853	1
HLA-A	8q-Amp	0.853	1
KEAP1	8q-Amp	0.853	1
NLRP8	Amp_20q11.22	0.853	1
TGFBR2	11q-Del	0.853	1
TGFBR2	Del_19p13.3	0.853	1
7q-Amp	Amp_20q11.22	0.853	1
15q-Del	Del_14q11.2	0.853	1
Amp_11p13	Del_1q44	0.853	1
Amp_11q13.3	Del_2q21.2	0.853	1
Amp_12q15	Del_18q23	0.853	1
Del_17q25.3	Del_19p13.3	0.853	1
EP300	7q-Amp	0.854	1
FBXW7	4p-Del	0.854	1
KRT17	Del_Xq21.33	0.854	1
PIK3CA	11q-Del	0.854	1
TIGD4	Del_10p11.21	0.854	1
ZNF233	Del_10p11.21	0.854	1
20p-Amp	Del_3p26.2	0.854	1
20q-Amp	5q-Del	0.854	1
20q-Amp	Amp_18p11.31	0.854	1
20q-Amp	Amp_18q11.2	0.854	1
7q-Amp	Del_11p15.5	0.854	1
3q-Del	Amp_7q21.3	0.854	1
Xp-Del	Del_11p15.5	0.854	1
Amp_7p11.2	Amp_15q26.3	0.854	1
Amp_15q26.3	Del_10q23.31	0.854	1
Del_2q22.1	Del_5q15	0.854	1
HUWE1	Del_1p36.21	0.855	1
Amp_2q31.2	Del_3p24.1	0.855	1
Amp_6q12	Del_Xp22.2	0.855	1
Amp_13q34	Amp_Xq28	0.855	1
Amp_13q34	Del_Xp22.2	0.855	1
Amp_Xq28	Del_7q31.1	0.855	1
Del_9q21.11	Del_16q23.1	0.855	1
Del_21q22.3	Del_Xp21.3	0.855	1
ADAM19	NAP1L2	0.856	1
ADAM19	ZNF233	0.856	1
EMG1	Del_3p26.2	0.856	1
KIAA1267	NAP1L2	0.856	1
KIAA1267	ZNF233	0.856	1
NAP1L2	ZNF623	0.856	1
NSD1	Amp_18q11.2	0.856	1
RASA1	Del_16q23.3	0.856	1
RB1	5p-Amp	0.856	1
RB1	Amp_9p23	0.856	1
SMAD4	Del_5q35.3	0.856	1
TIGD4	ZNF623	0.856	1
ZNF233	ZNF623	0.856	1
ZNF750	Del_10p11.21	0.856	1
3p-Del	Amp_12q15	0.856	1
Amp_5p12	Del_11p15.5	0.856	1
Amp_9p23	Del_10p15.3	0.856	1
GAGE2A	MLL4	0.857	1
KRTAP5-5	MLL4	0.857	1
MLL4	7q-Amp	0.857	1
NLRP8	Amp_8q24.21	0.857	1
OR6C65	PIK3CA	0.857	1
OR6C65	3p-Del	0.857	1
ZNF750	Del_3p12.1	0.857	1
20p-Amp	Del_3p14.2	0.857	1
7q-Amp	Amp_8q24.21	0.857	1
11p-Del	Amp_6p12.1	0.857	1
Amp_6p12.1	Amp_12q15	0.857	1
Amp_8q24.21	Del_2q21.2	0.857	1
Amp_12p13.33	Del_4p16.3	0.857	1
Amp_12p13.33	Del_4q35.2	0.857	1
ADAM19	21q-Del	0.858	1
EMG1	11p-Del	0.858	1
EMG1	Amp_12q15	0.858	1
EMG1	Del_6p25.3	0.858	1
EMG1	Del_9q21.11	0.858	1
KDM6A	Amp_6q12	0.858	1
KRT17	Amp_3q26.33	0.858	1
KRTAP5-5	NOTCH1	0.858	1
MAPK1	Del_11p15.5	0.858	1
NFE2L2	Del_8p23.2	0.858	1
NUDT11	Del_10q23.31	0.858	1
RASA1	Amp_6q12	0.858	1
RASA1	Amp_13q34	0.858	1
RB1	Amp_2q11.2	0.858	1
RB1	Amp_6q12	0.858	1
RB1	Amp_13q34	0.858	1
RB1	Del_7q31.1	0.858	1
20q-Amp	Del_1p13.2	0.858	1
11p-Del	Del_1q44	0.858	1
18q-Del	Amp_3q26.33	0.858	1
Amp_12q15	Del_1q44	0.858	1
Del_1q44	Del_6p25.3	0.858	1
C3orf59	JUB	0.859	1
C3orf59	Del_Xp22.2	0.859	1
FAT1	Del_7q36.1	0.859	1
FAT1	Del_19p13.3	0.859	1
FGFR3	JUB	0.859	1
JUB	RHOA	0.859	1
RHOA	Amp_Xq28	0.859	1
THSD7A	ZNF750	0.859	1
TIGD4	Amp_7q21.3	0.859	1
ZNF750	10p-Del	0.859	1
ZNF750	Del_1p36.21	0.859	1
14q-Amp	18q-Del	0.859	1
Amp_6p12.1	Del_4p16.3	0.859	1
Amp_6p12.1	Del_4q35.2	0.859	1
Amp_6p12.1	Del_13q14.2	0.859	1
Amp_7p11.2	Amp_8p11.23	0.859	1
Amp_9p23	Amp_11p13	0.859	1
Amp_12p13.33	Del_Xq21.33	0.859	1
Amp_Xq28	Del_16q23.1	0.859	1
C3orf59	Del_13q14.2	0.86	1
EP300	Amp_20q11.22	0.86	1
EPHA2	MLL2	0.86	1
FBXW7	Del_13q14.2	0.86	1
FGFR3	Del_4q35.2	0.86	1
IRS4	Amp_9p24.1	0.86	1
IRS4	Del_16q23.1	0.86	1
KDM6A	8q-Amp	0.86	1
KRT17	Del_5q35.3	0.86	1
MLL2	Del_2q21.2	0.86	1
OR6C65	Del_16q23.1	0.86	1
PTPN14	Del_16q23.1	0.86	1
14q-Amp	Amp_18q11.2	0.86	1
7p-Amp	Del_4q35.2	0.86	1
Amp_6q12	Amp_9p13.3	0.86	1
Amp_6q12	Amp_12p13.33	0.86	1
Amp_7p11.2	Del_Xq21.33	0.86	1
Amp_9p13.3	Amp_13q34	0.86	1
Amp_12p13.33	Amp_13q34	0.86	1
Amp_20q11.22	Del_10q23.31	0.86	1
CDKN2A	10p-Del	0.861	1
EP300	3q-Amp	0.861	1
FAT1	10p-Del	0.861	1
IRS4	ZNF750	0.861	1
MLL2	Amp_11q13.3	0.861	1
MLL2	Del_3p12.1	0.861	1
NLRP8	Amp_8q11.21	0.861	1
NOTCH1	SMAD4	0.861	1
PTEN	TGFBR2	0.861	1
RAC1	TGFBR2	0.861	1
SMAD4	Del_14q32.32	0.861	1
THSD7A	Del_5q35.3	0.861	1
ZNF750	1q-Amp	0.861	1
14q-Amp	Amp_17q12	0.861	1
9q-Del	Amp_8q11.21	0.861	1
Xp-Del	Amp_8q11.21	0.861	1
FBXW7	Del_3p26.2	0.862	1
NLRP8	5q-Del	0.862	1
THSD7A	Del_11q23.1	0.862	1
ZNF750	Del_4p16.3	0.862	1
ZNF750	Del_4q35.2	0.862	1
20p-Amp	7q-Amp	0.862	1
3q-Amp	Amp_5p12	0.862	1
7q-Amp	Amp_18q11.2	0.862	1
9q-Amp	Del_1p13.2	0.862	1
Amp_2q31.2	Amp_9p13.3	0.862	1
Amp_5p15.33	Del_Xp21.3	0.862	1
Amp_13q22.1	Del_3p26.2	0.862	1
Amp_15q26.3	Amp_18q11.2	0.862	1
Amp_20q11.22	Del_5q15	0.862	1
MEFV	Amp_9p24.1	0.863	1
MEFV	Del_16q23.1	0.863	1
MLL2	14q-Amp	0.863	1
NSD1	RB1	0.863	1
NSD1	ZNF623	0.863	1
PIK3R1	Amp_9p24.1	0.863	1
20q-Amp	Del_4p16.3	0.863	1
Amp_8q11.21	Amp_11p13	0.863	1
Amp_9p24.1	Del_2q22.1	0.863	1
EMG1	HLA-B	0.864	1
EMG1	TGFBR2	0.864	1
EMG1	Del_17q25.3	0.864	1
EP300	NFE2L2	0.864	1
GAGE2A	NLRP8	0.864	1
GAGE2A	9q-Del	0.864	1
GAGE2A	Xp-Del	0.864	1
GAGE2A	Amp_15q26.3	0.864	1
GAGE2A	Del_2q21.2	0.864	1
HLA-B	Del_1q44	0.864	1
KRTAP5-5	NLRP8	0.864	1
KRTAP5-5	7q-Amp	0.864	1
KRTAP5-5	9q-Del	0.864	1
KRTAP5-5	Xp-Del	0.864	1
KRTAP5-5	Amp_15q26.3	0.864	1
KRTAP5-5	Del_2q21.2	0.864	1
MAPK1	20p-Amp	0.864	1
MAPK1	5q-Del	0.864	1
NUDT11	5q-Del	0.864	1
NUDT11	Amp_18q11.2	0.864	1
RASA1	20q-Amp	0.864	1
RB1	20q-Amp	0.864	1
TGFBR2	Del_1q44	0.864	1
THSD7A	Del_1p36.21	0.864	1
THSD7A	Del_Xp21.3	0.864	1
TP53	12p-Amp	0.864	1
TP53	Del_19p13.3	0.864	1
VEZF1	8q-Amp	0.864	1
ZNF750	Amp_7q21.3	0.864	1
20p-Amp	Amp_7q21.3	0.864	1
5q-Del	Amp_7q21.3	0.864	1
Amp_9p13.3	Amp_20q11.22	0.864	1
Amp_11q13.3	Del_14q11.2	0.864	1
Amp_12p13.33	Amp_20q11.22	0.864	1
Del_1q44	Del_17q25.3	0.864	1
BRAF	PIK3R1	0.865	1
BRAF	VEZF1	0.865	1
C3orf59	Del_5q12.1	0.865	1
CREBBP	DYSF	0.865	1
CREBBP	Del_7q31.1	0.865	1
DYSF	7p-Amp	0.865	1
DYSF	13q-Del	0.865	1
FBXW7	21q-Del	0.865	1
FBXW7	Del_7q31.1	0.865	1
KDM6A	Amp_3q26.33	0.865	1
KEAP1	8p-Amp	0.865	1
KIAA1267	Del_8p23.2	0.865	1
KRT17	SMAD4	0.865	1
KRT17	15q-Del	0.865	1
KRT17	4p-Del	0.865	1
KRT17	Amp_17q12	0.865	1
MAPK1	MEFV	0.865	1
MAPK1	PIK3R1	0.865	1
MAPK1	VEZF1	0.865	1
MEFV	NUDT11	0.865	1
NUDT11	PIK3R1	0.865	1
NUDT11	VEZF1	0.865	1
THSD7A	Del_7q36.1	0.865	1
20p-Amp	Del_11p15.5	0.865	1
7p-Amp	Amp_2q11.2	0.865	1
7p-Amp	Amp_13q34	0.865	1
9q-Amp	4q-Del	0.865	1
11q-Del	Amp_8p11.23	0.865	1
11q-Del	Del_4q21.3	0.865	1
13q-Del	21q-Del	0.865	1
13q-Del	Amp_2q11.2	0.865	1
13q-Del	Del_7q31.1	0.865	1
Amp_6q12	Amp_13q22.1	0.865	1
Amp_8q24.21	Del_4q35.2	0.865	1
Del_7q36.1	Del_Xp21.3	0.865	1
ADAM19	8p-Amp	0.866	1
C3orf59	13q-Del	0.866	1
CDKN2A	Del_Xq21.33	0.866	1
FGFR3	Amp_13q22.1	0.866	1
HRAS	JUB	0.866	1
HRAS	KIAA1267	0.866	1
JUB	8p-Amp	0.866	1
JUB	4q-Del	0.866	1
KIAA1267	8p-Amp	0.866	1
KIAA1267	4q-Del	0.866	1
KRTAP5-5	8q-Amp	0.866	1
NLRP8	Del_5q35.3	0.866	1
PIK3CA	Del_2q22.1	0.866	1
PTEN	Del_8p23.2	0.866	1
RAC1	Del_8p23.2	0.866	1
RHOA	Amp_13q22.1	0.866	1
SMAD4	Del_3p26.2	0.866	1
18q-Del	Del_Xq21.33	0.866	1
4q-Del	Amp_Xq28	0.866	1
Xp-Del	Del_5q35.3	0.866	1
Amp_5p15.33	Del_11q23.1	0.866	1
CREBBP	MLL2	0.867	1
HUWE1	Amp_9p23	0.867	1
HUWE1	Del_4p16.3	0.867	1
NFE2L2	Del_5q12.1	0.867	1
NFE2L2	Del_5q15	0.867	1
PTEN	Del_1p13.2	0.867	1
TIGD4	Amp_5p15.33	0.867	1
ZNF233	Del_11q23.1	0.867	1
18q-Del	Amp_6q12	0.867	1
3q-Del	Del_1p13.2	0.867	1
Amp_2q31.2	Amp_9p23	0.867	1
Amp_6p12.1	Amp_9p13.3	0.867	1
CREBBP	Del_5q12.1	0.868	1
NAP1L2	Del_1p13.2	0.868	1
OR6C65	9p-Del	0.868	1
PTPN14	9p-Del	0.868	1
TP53	Amp_3q26.33	0.868	1
ZNF233	Del_1p13.2	0.868	1
ZNF750	Del_4p15.2	0.868	1
ZNF750	Del_5q12.1	0.868	1
12p-Amp	Del_10p11.21	0.868	1
14q-Amp	Del_10p11.21	0.868	1
3p-Del	Amp_6q12	0.868	1
Amp_2q31.2	Del_14q11.2	0.868	1
Amp_7q21.3	Del_21q22.3	0.868	1
Amp_9p13.3	Del_5q12.1	0.868	1
Amp_9p13.3	Del_5q15	0.868	1
Amp_13q22.1	Del_5q12.1	0.868	1
C3orf59	ZNF233	0.869	1
EMG1	EPHA2	0.869	1
EPHA2	Del_1q44	0.869	1
FGFR3	NAP1L2	0.869	1
FGFR3	TIGD4	0.869	1
FGFR3	ZNF233	0.869	1
NAP1L2	RHOA	0.869	1
NFE2L2	SMAD4	0.869	1
NLRP8	7q-Amp	0.869	1
RHOA	ZNF233	0.869	1
SMAD4	Amp_6p12.1	0.869	1
VEZF1	Del_3p14.2	0.869	1
5p-Amp	Del_14q11.2	0.869	1
7q-Amp	Xp-Del	0.869	1
15q-Del	Amp_6p12.1	0.869	1
Xp-Del	Amp_15q26.3	0.869	1
Amp_6p12.1	Amp_17q12	0.869	1
Amp_11p13	Del_6p25.3	0.869	1
Amp_12q15	Del_Xq21.33	0.869	1
Del_6p25.3	Del_Xq21.33	0.869	1
KRT17	TP53	0.87	1
RASA1	Del_3p14.2	0.87	1
RASA1	Del_8p23.2	0.87	1
TGFBR2	Amp_6p12.1	0.87	1
5p-Amp	4p-Del	0.87	1
9q-Amp	Del_4q22.1	0.87	1
JUB	MLL4	0.871	1
NOTCH1	Del_9p21.3	0.871	1
PTEN	Del_13q12.11	0.871	1
3q-Amp	5p-Amp	0.871	1
3q-Amp	Amp_2q11.2	0.871	1
9p-Del	Del_14q32.32	0.871	1
Amp_5p15.33	Del_4q35.2	0.871	1
Amp_5p12	Del_4q21.3	0.871	1
ASXL1	DYSF	0.872	1
ASXL1	Amp_13q34	0.872	1
ASXL1	Del_7q31.1	0.872	1
CDKN2A	Amp_8q24.21	0.872	1
CREBBP	Amp_9p24.1	0.872	1
CUL3	DYSF	0.872	1
CUL3	NOTCH1	0.872	1
CUL3	Amp_13q34	0.872	1
CUL3	Del_7q31.1	0.872	1
DYSF	IRS4	0.872	1
DYSF	1q-Amp	0.872	1
EP300	RB1	0.872	1
GAGE2A	RASA1	0.872	1
GAGE2A	RB1	0.872	1
IRS4	NOTCH1	0.872	1
IRS4	Amp_6q12	0.872	1
IRS4	Amp_13q34	0.872	1
KDM6A	KRTAP5-5	0.872	1
KDM6A	Del_11p15.5	0.872	1
KRTAP5-5	RASA1	0.872	1
KRTAP5-5	RB1	0.872	1
NAP1L2	Amp_8q24.21	0.872	1
OR6C65	Amp_2q11.2	0.872	1
OR6C65	Amp_13q34	0.872	1
OR6C65	Del_7q31.1	0.872	1
PTPN14	Amp_13q34	0.872	1
RASA1	Del_10q23.31	0.872	1
TP53	ZNF623	0.872	1
1q-Amp	Amp_6q12	0.872	1
1q-Amp	Amp_13q34	0.872	1
7p-Amp	Amp_9p24.1	0.872	1
7p-Amp	Del_16q23.1	0.872	1
11q-Del	Amp_18p11.31	0.872	1
Amp_18p11.31	Del_7q36.1	0.872	1
Del_10p11.21	Del_Xq21.33	0.872	1
C3orf59	Del_Xp21.3	0.873	1
FGFR3	Del_4q21.3	0.873	1
FGFR3	Del_Xp21.3	0.873	1
KIAA1267	Del_14q11.2	0.873	1
MLL4	Del_2q22.1	0.873	1
NAP1L2	Del_4q22.1	0.873	1
NAP1L2	Del_10p15.3	0.873	1
RHOA	Del_1p36.21	0.873	1
TIGD4	Del_4q22.1	0.873	1
TIGD4	Del_10p15.3	0.873	1
ZNF233	Del_10p15.3	0.873	1
ZNF623	Amp_20q11.22	0.873	1
ZNF623	Del_14q11.2	0.873	1
5p-Amp	Amp_9p24.1	0.873	1
5p-Amp	Del_16q23.1	0.873	1
7p-Amp	Del_3p14.2	0.873	1
11p-Del	Del_16q23.3	0.873	1
13q-Del	Del_8p23.2	0.873	1
4p-Del	Xp-Del	0.873	1
9p-Del	Amp_8q11.21	0.873	1
Amp_8q11.21	Del_18q23	0.873	1
Amp_8q24.21	Del_9p21.3	0.873	1
Amp_9p23	Del_9q21.11	0.873	1
Amp_12p13.33	Del_10p11.21	0.873	1
Del_9q21.11	Del_16q23.3	0.873	1
DYSF	Del_1p36.21	0.874	1
FAT1	MLL2	0.874	1
MEFV	Del_16q23.3	0.874	1
RAC1	Del_4q22.1	0.874	1
RAC1	Del_10p15.3	0.874	1
TP53	Del_7q31.1	0.874	1
VEZF1	Amp_9p23	0.874	1
8q-Amp	15q-Del	0.874	1
10p-Del	Amp_2q11.2	0.874	1
3q-Del	Del_10p15.3	0.874	1
5q-Del	Amp_5p12	0.874	1
5q-Del	Amp_6p12.1	0.874	1
Amp_2q11.2	Del_1p36.21	0.874	1
Amp_2q11.2	Del_4q21.3	0.874	1
Amp_6p12.1	Del_3p12.1	0.874	1
Amp_6q12	Del_1p36.21	0.874	1
Amp_6q12	Del_4q21.3	0.874	1
Amp_6q12	Del_Xp21.3	0.874	1
Del_4q21.3	Del_7q31.1	0.874	1
DYSF	Del_3p14.2	0.875	1
EMG1	HLA-A	0.875	1
EMG1	KEAP1	0.875	1
EMG1	9q-Amp	0.875	1
HLA-A	Del_1q44	0.875	1
IRS4	Del_16q23.3	0.875	1
KDM6A	Amp_5p12	0.875	1
KEAP1	Del_1q44	0.875	1
KEAP1	Del_14q11.2	0.875	1
KRTAP5-5	Amp_5p12	0.875	1
OR6C65	Del_16q23.3	0.875	1
PTPN14	Del_16q23.3	0.875	1
VEZF1	Amp_5p12	0.875	1
9q-Amp	Del_1q44	0.875	1
11q-Del	Amp_20q11.22	0.875	1
18q-Del	Amp_6p12.1	0.875	1
Amp_5p12	Amp_18p11.31	0.875	1
ADAM19	KRT17	0.876	1
HUWE1	Del_4p15.2	0.876	1
JUB	9p-Del	0.876	1
KIAA1267	KRT17	0.876	1
KRT17	ZNF623	0.876	1
NFE2L2	Amp_7p11.2	0.876	1
NUDT11	Amp_2q31.2	0.876	1
Amp_12p13.33	Amp_Xq28	0.876	1
CDKN2A	EMG1	0.877	1
CREBBP	8p-Amp	0.877	1
EMG1	FAT1	0.877	1
KRT17	Del_2q22.1	0.877	1
KRTAP5-5	Amp_7p11.2	0.877	1
TGFBR2	Del_Xq21.33	0.877	1
20p-Amp	5q-Del	0.877	1
20p-Amp	Amp_18q11.2	0.877	1
7p-Amp	4q-Del	0.877	1
Del_2q22.1	Del_13q12.11	0.877	1
Del_17q25.3	Del_Xq21.33	0.877	1
HRAS	ZNF750	0.878	1
HUWE1	NAP1L2	0.878	1
HUWE1	TIGD4	0.878	1
HUWE1	ZNF233	0.878	1
NAP1L2	8p-Del	0.878	1
NAP1L2	Del_21q22.3	0.878	1
PTEN	Del_3p12.1	0.878	1
ZNF233	Del_21q22.3	0.878	1
ZNF750	4q-Del	0.878	1
Amp_8q11.21	Amp_9p24.1	0.878	1
Amp_8q11.21	Del_16q23.1	0.878	1
Amp_Xq28	Del_14q11.2	0.878	1
ASXL1	GAGE2A	0.879	1
CUL3	GAGE2A	0.879	1
CUL3	KRTAP5-5	0.879	1
GAGE2A	IRS4	0.879	1
GAGE2A	OR6C65	0.879	1
GAGE2A	PTPN14	0.879	1
IRS4	KRTAP5-5	0.879	1
KDM6A	5q-Del	0.879	1
KRTAP5-5	PTPN14	0.879	1
KRTAP5-5	1q-Amp	0.879	1
MEFV	PIK3R1	0.879	1
MEFV	VEZF1	0.879	1
MLL4	Amp_9p13.3	0.879	1
NLRP8	Amp_2q31.2	0.879	1
PIK3CA	Del_17q25.3	0.879	1
PIK3R1	VEZF1	0.879	1
PIK3R1	20q-Amp	0.879	1
RASA1	20p-Amp	0.879	1
RASA1	5q-Del	0.879	1
RB1	20p-Amp	0.879	1
RB1	Amp_18q11.2	0.879	1
TGFBR2	Del_5q35.3	0.879	1
VEZF1	20q-Amp	0.879	1
ZNF750	Del_1p13.2	0.879	1
ZNF750	Del_2q36.2	0.879	1
1q-Amp	5p-Amp	0.879	1
3p-Del	Del_17q25.3	0.879	1
CREBBP	MLL4	0.88	1
EMG1	ZNF750	0.88	1
HLA-A	RAC1	0.88	1
HLA-A	3q-Del	0.88	1
HUWE1	PTEN	0.88	1
KEAP1	RAC1	0.88	1
KIAA1267	14q-Amp	0.88	1
KIAA1267	Del_14q32.32	0.88	1
PTEN	8p-Del	0.88	1
RAC1	8p-Del	0.88	1
ZNF623	14q-Amp	0.88	1
ZNF750	Del_1q44	0.88	1
11p-Del	Amp_12q15	0.88	1
15q-Del	Amp_8q24.21	0.88	1
3q-Del	Del_21q22.3	0.88	1
Amp_7q21.3	Del_19p13.3	0.88	1
Amp_8q24.21	Amp_17q12	0.88	1
BRAF	NAP1L2	0.881	1
EMG1	Del_18q23	0.881	1
EP300	Del_10p15.3	0.881	1
FAT1	Amp_2q31.2	0.881	1
KDM6A	NLRP8	0.881	1
KDM6A	7q-Amp	0.881	1
KDM6A	9q-Del	0.881	1
MAPK1	NAP1L2	0.881	1
MAPK1	TIGD4	0.881	1
NAP1L2	NUDT11	0.881	1
NLRP8	RASA1	0.881	1
NUDT11	TIGD4	0.881	1
NUDT11	ZNF233	0.881	1
RASA1	9q-Del	0.881	1
RASA1	Xp-Del	0.881	1
RB1	7q-Amp	0.881	1
RB1	9q-Del	0.881	1
RB1	Xp-Del	0.881	1
TGFBR2	Amp_11p13	0.881	1
11q-Del	Del_4q35.2	0.881	1
Amp_2q11.2	Amp_11q13.3	0.881	1
Amp_8p11.23	Del_18q23	0.881	1
Amp_13q22.1	Del_2q22.1	0.881	1
Del_1q44	Del_18q23	0.881	1
ADAM19	PIK3CA	0.882	1
BRAF	JUB	0.882	1
BRAF	Amp_Xq28	0.882	1
CUL3	MLL4	0.882	1
JUB	MAPK1	0.882	1
KIAA1267	PIK3CA	0.882	1
MAPK1	Amp_Xq28	0.882	1
MLL4	OR6C65	0.882	1
MLL4	PTPN14	0.882	1
MLL4	1q-Amp	0.882	1
NAP1L2	11q-Del	0.882	1
NAP1L2	Del_19p13.3	0.882	1
NUDT11	Amp_Xq28	0.882	1
NUDT11	Del_Xp22.2	0.882	1
OR6C65	20q-Amp	0.882	1
PTPN14	20q-Amp	0.882	1
TIGD4	Del_7q36.1	0.882	1
ZNF233	11q-Del	0.882	1
ZNF233	Del_7q36.1	0.882	1
ZNF233	Del_19p13.3	0.882	1
1q-Amp	20q-Amp	0.882	1
20q-Amp	11p-Del	0.882	1
20q-Amp	Amp_12q15	0.882	1
20q-Amp	Del_6p25.3	0.882	1
5p-Amp	Amp_18p11.31	0.882	1
7p-Amp	3p-Del	0.882	1
21q-Del	Amp_5p15.33	0.882	1
9p-Del	Amp_8p11.23	0.882	1
ADAM19	Del_5q35.3	0.883	1
DYSF	Del_13q14.2	0.883	1
HUWE1	8p-Amp	0.883	1
HUWE1	4q-Del	0.883	1
VEZF1	Del_3p24.1	0.883	1
20p-Amp	Del_1p13.2	0.883	1
20p-Amp	Del_2q36.2	0.883	1
8p-Amp	Del_21q22.3	0.883	1
21q-Del	Del_7q31.1	0.883	1
Amp_6q12	Del_4q35.2	0.883	1
Amp_9p13.3	Amp_11p13	0.883	1
Amp_13q34	Del_13q14.2	0.883	1
Del_7q31.1	Del_13q14.2	0.883	1
DYSF	Del_18q23	0.884	1
EP300	MEFV	0.884	1
EP300	PIK3R1	0.884	1
MEFV	Del_10q23.31	0.884	1
MEFV	Del_11p15.5	0.884	1
MLL2	3q-Amp	0.884	1
NOTCH1	Del_7q31.1	0.884	1
PIK3R1	Del_10q23.31	0.884	1
SMAD4	Amp_12p13.33	0.884	1
THSD7A	Del_5q12.1	0.884	1
THSD7A	Del_5q15	0.884	1
TP53	7p-Amp	0.884	1
12p-Amp	9q-Amp	0.884	1
10p-Del	Amp_9p24.1	0.884	1
Amp_12p13.33	Amp_17q12	0.884	1
Amp_13q34	Del_18q23	0.884	1
FAT1	PTPN14	0.885	1
KEAP1	Del_7q36.1	0.885	1
9q-Amp	Del_7q36.1	0.885	1
9q-Amp	Del_19p13.3	0.885	1
11p-Del	15q-Del	0.885	1
15q-Del	Amp_12q15	0.885	1
15q-Del	Del_6p25.3	0.885	1
15q-Del	Del_9q21.11	0.885	1
18q-Del	Del_Xp22.2	0.885	1
Amp_5p12	Amp_9p13.3	0.885	1
Amp_9p13.3	Del_5q35.3	0.885	1
Amp_12q15	Amp_17q12	0.885	1
Amp_17q12	Del_6p25.3	0.885	1
C3orf59	HRAS	0.886	1
C3orf59	KRT17	0.886	1
C3orf59	8p-Amp	0.886	1
DYSF	EMG1	0.886	1
DYSF	Del_1q44	0.886	1
EMG1	Amp_2q11.2	0.886	1
EMG1	Amp_6q12	0.886	1
EMG1	Amp_13q34	0.886	1
FGFR3	KRT17	0.886	1
FGFR3	8p-Amp	0.886	1
FGFR3	4q-Del	0.886	1
KRT17	RHOA	0.886	1
NAP1L2	PIK3CA	0.886	1
PTEN	11q-Del	0.886	1
PTEN	Del_19p13.3	0.886	1
PTPN14	8q-Amp	0.886	1
ZNF233	3p-Del	0.886	1
ZNF750	Del_4q22.1	0.886	1
8q-Amp	Amp_9p23	0.886	1
11q-Del	3q-Del	0.886	1
15q-Del	Amp_5p12	0.886	1
Amp_2q11.2	Del_1q44	0.886	1
Amp_6q12	Del_1q44	0.886	1
Amp_8q11.21	Amp_12q15	0.886	1
Amp_13q34	Del_1q44	0.886	1
FGFR3	5p-Amp	0.887	1
JUB	Xp-Del	0.887	1
JUB	Amp_15q26.3	0.887	1
RASA1	Del_5q35.3	0.887	1
THSD7A	4q-Del	0.887	1
8p-Amp	Del_1p36.21	0.887	1
9q-Del	Del_Xp22.2	0.887	1
Amp_5p12	Del_4q35.2	0.887	1
Amp_7q21.3	Amp_18p11.31	0.887	1
BRAF	CREBBP	0.888	1
BRAF	FAT1	0.888	1
BRAF	Amp_18p11.31	0.888	1
CREBBP	MAPK1	0.888	1
DYSF	Del_3p12.1	0.888	1
FBXW7	Del_14q11.2	0.888	1
MLL4	10p-Del	0.888	1
NUDT11	13q-Del	0.888	1
20p-Amp	Del_3p24.1	0.888	1
7p-Amp	Del_14q11.2	0.888	1
8q-Amp	Del_10p11.21	0.888	1
9p-Del	Amp_6p12.1	0.888	1
Amp_2q31.2	Del_10q23.31	0.888	1
Amp_13q22.1	Del_14q11.2	0.888	1
Del_2q21.2	Del_3p26.2	0.888	1
ASXL1	Del_11p15.5	0.889	1
CREBBP	Amp_8q11.21	0.889	1
EP300	OR6C65	0.889	1
EP300	1q-Amp	0.889	1
MEFV	Amp_18q11.2	0.889	1
PIK3R1	20p-Amp	0.889	1
PIK3R1	5q-Del	0.889	1
PTPN14	Del_10q23.31	0.889	1
PTPN14	Del_11p15.5	0.889	1
VEZF1	20p-Amp	0.889	1
VEZF1	5q-Del	0.889	1
ZNF750	3q-Del	0.889	1
11p-Del	Amp_18p11.31	0.889	1
21q-Del	Amp_5p12	0.889	1
Amp_2q11.2	Del_5q12.1	0.889	1
Amp_6q12	Del_5q12.1	0.889	1
Amp_6q12	Del_5q15	0.889	1
Amp_9p13.3	Amp_13q22.1	0.889	1
Amp_13q34	Del_4p15.2	0.889	1
Amp_13q34	Del_5q12.1	0.889	1
Amp_13q34	Del_5q15	0.889	1
FBXW7	Del_3p12.1	0.89	1
JUB	14q-Amp	0.89	1
PIK3CA	12p-Amp	0.89	1
PTPN14	Amp_8p11.23	0.89	1
RASA1	Del_3p24.1	0.89	1
12p-Amp	Amp_Xq28	0.89	1
18q-Del	Amp_11p13	0.89	1
9q-Del	Amp_5p15.33	0.89	1
Amp_7p11.2	Amp_17q12	0.89	1
Amp_15q26.3	Del_11q23.1	0.89	1
DYSF	4q-Del	0.891	1
EMG1	MLL4	0.891	1
MLL4	Del_1q44	0.891	1
TIGD4	Del_16q23.1	0.891	1
20p-Amp	Del_5q35.3	0.891	1
11q-Del	4q-Del	0.891	1
4q-Del	Amp_2q11.2	0.891	1
4q-Del	Amp_6q12	0.891	1
4q-Del	Del_7q31.1	0.891	1
9p-Del	Amp_13q22.1	0.891	1
Amp_12q15	Del_17q25.3	0.891	1
Del_2q22.1	Del_9q21.11	0.891	1
Del_8p23.2	Del_14q11.2	0.891	1
FGFR3	Del_14q11.2	0.892	1
MLL4	Del_10p11.21	0.892	1
NSD1	5p-Amp	0.892	1
NUDT11	Del_4p16.3	0.892	1
RASA1	4p-Del	0.892	1
RB1	4p-Del	0.892	1
12p-Amp	Del_1p13.2	0.892	1
20p-Amp	Del_4q22.1	0.892	1
5p-Amp	Del_4q35.2	0.892	1
9q-Amp	Amp_5p15.33	0.892	1
Amp_5p12	Del_9p21.3	0.892	1
Amp_8q11.21	Amp_18q11.2	0.892	1
Amp_18q11.2	Del_4q22.1	0.892	1
Amp_18q11.2	Del_4q35.2	0.892	1
Amp_20q11.22	Del_3p14.2	0.892	1
ADAM19	NOTCH1	0.893	1
ASXL1	9q-Del	0.893	1
ASXL1	Xp-Del	0.893	1
ASXL1	Del_2q21.2	0.893	1
CUL3	NLRP8	0.893	1
CUL3	7q-Amp	0.893	1
CUL3	Del_2q21.2	0.893	1
EPHA2	FAT1	0.893	1
GAGE2A	PTEN	0.893	1
GAGE2A	RAC1	0.893	1
GAGE2A	3q-Del	0.893	1
HLA-B	SMAD4	0.893	1
HLA-B	Amp_17q12	0.893	1
IRS4	NLRP8	0.893	1
IRS4	7q-Amp	0.893	1
IRS4	Amp_15q26.3	0.893	1
IRS4	Del_2q21.2	0.893	1
KRT17	Amp_7q21.3	0.893	1
KRTAP5-5	PTEN	0.893	1
KRTAP5-5	RAC1	0.893	1
KRTAP5-5	3q-Del	0.893	1
NLRP8	OR6C65	0.893	1
NLRP8	PTPN14	0.893	1
OR6C65	7q-Amp	0.893	1
OR6C65	Xp-Del	0.893	1
OR6C65	Del_2q21.2	0.893	1
PTPN14	9q-Del	0.893	1
PTPN14	Xp-Del	0.893	1
PTPN14	Del_18q23	0.893	1
SMAD4	Del_17q25.3	0.893	1
TGFBR2	15q-Del	0.893	1
ZNF750	Amp_5p12	0.893	1
1q-Amp	Xp-Del	0.893	1
1q-Amp	Amp_15q26.3	0.893	1
1q-Amp	Del_2q21.2	0.893	1
20p-Amp	3p-Del	0.893	1
9q-Amp	Amp_8p11.23	0.893	1
15q-Del	Del_17q25.3	0.893	1
21q-Del	Del_13q14.2	0.893	1
Amp_2q31.2	Amp_8p11.23	0.893	1
Del_10p11.21	Del_Xp22.2	0.893	1
BRAF	THSD7A	0.894	1
CDKN2A	Del_10p11.21	0.894	1
CREBBP	NLRP8	0.894	1
CREBBP	9q-Del	0.894	1
CREBBP	Amp_15q26.3	0.894	1
FAT1	PIK3CA	0.894	1
FBXW7	NLRP8	0.894	1
HLA-A	NFE2L2	0.894	1
KEAP1	NFE2L2	0.894	1
MEFV	NAP1L2	0.894	1
MEFV	ZNF233	0.894	1
MLL2	Amp_17q12	0.894	1
NAP1L2	PIK3R1	0.894	1
NFE2L2	9q-Amp	0.894	1
NLRP8	7p-Amp	0.894	1
NUDT11	THSD7A	0.894	1
NUDT11	10p-Del	0.894	1
NUDT11	Del_4q21.3	0.894	1
NUDT11	Del_Xp21.3	0.894	1
PIK3R1	TIGD4	0.894	1
PIK3R1	ZNF233	0.894	1
TIGD4	VEZF1	0.894	1
VEZF1	ZNF233	0.894	1
7p-Amp	Amp_15q26.3	0.894	1
8q-Amp	Del_11q23.1	0.894	1
9q-Amp	Amp_6p12.1	0.894	1
10p-Del	Del_2q22.1	0.894	1
13q-Del	Xp-Del	0.894	1
13q-Del	Del_2q21.2	0.894	1
Xp-Del	Amp_13q22.1	0.894	1
Amp_17q12	Del_10p11.21	0.894	1
Del_1p36.21	Del_2q22.1	0.894	1
Del_2q22.1	Del_4q21.3	0.894	1
ADAM19	Amp_11p13	0.895	1
ASXL1	20p-Amp	0.895	1
CUL3	Amp_18q11.2	0.895	1
FAT1	Del_4q22.1	0.895	1
MLL2	Amp_18p11.31	0.895	1
OR6C65	20p-Amp	0.895	1
PTPN14	20p-Amp	0.895	1
ZNF623	Amp_11p13	0.895	1
1q-Amp	20p-Amp	0.895	1
1q-Amp	Amp_18q11.2	0.895	1
Amp_2q11.2	Del_2q36.2	0.895	1
Amp_5p12	Del_4q22.1	0.895	1
Amp_8p11.23	Del_9p21.3	0.895	1
Amp_12p13.33	Del_8p23.2	0.895	1
Amp_12q15	Del_4q35.2	0.895	1
Amp_13q34	Del_2q36.2	0.895	1
Del_2q36.2	Del_7q31.1	0.895	1
DYSF	Del_3p24.1	0.896	1
FAT1	5p-Amp	0.896	1
NUDT11	Del_4p15.2	0.896	1
RHOA	Amp_8p11.23	0.896	1
THSD7A	Del_8p23.2	0.896	1
1q-Amp	Amp_20q11.22	0.896	1
BRAF	KRT17	0.897	1
EMG1	NLRP8	0.897	1
EMG1	7q-Amp	0.897	1
EMG1	9q-Del	0.897	1
EMG1	Xp-Del	0.897	1
EMG1	Amp_15q26.3	0.897	1
EMG1	Del_2q21.2	0.897	1
FBXW7	18q-Del	0.897	1
KRT17	NUDT11	0.897	1
NFE2L2	Del_9p21.3	0.897	1
NLRP8	Amp_12p13.33	0.897	1
NLRP8	Del_1q44	0.897	1
7q-Amp	Del_1q44	0.897	1
8p-Amp	21q-Del	0.897	1
13q-Del	18q-Del	0.897	1
9q-Del	Amp_12p13.33	0.897	1
Xp-Del	Amp_9p13.3	0.897	1
Xp-Del	Del_1q44	0.897	1
Amp_5p15.33	Del_8p23.2	0.897	1
Amp_9p23	Amp_12p13.33	0.897	1
Amp_12p13.33	Del_6p25.3	0.897	1
Amp_15q26.3	Del_1q44	0.897	1
Del_1q44	Del_2q21.2	0.897	1
Del_2q21.2	Del_13q12.11	0.897	1
DYSF	RAC1	0.898	1
GAGE2A	Del_13q12.11	0.898	1
NLRP8	Del_9p21.3	0.898	1
PTEN	Amp_13q34	0.898	1
PTEN	Del_7q31.1	0.898	1
RAC1	Del_7q31.1	0.898	1
20p-Amp	Amp_2q31.2	0.898	1
3q-Del	Amp_13q34	0.898	1
Amp_5p12	Del_4p15.2	0.898	1
Amp_5p12	Del_5q15	0.898	1
BRAF	Amp_8q24.21	0.899	1
C3orf59	Del_14q32.32	0.899	1
FBXW7	Del_14q32.32	0.899	1
PIK3CA	Del_4q22.1	0.899	1
12p-Amp	Amp_8p11.23	0.899	1
14q-Amp	Amp_8p11.23	0.899	1
20p-Amp	11p-Del	0.899	1
5p-Amp	Del_8p23.2	0.899	1
5p-Amp	Del_16q23.3	0.899	1
8q-Amp	Amp_2q11.2	0.899	1
8q-Amp	Amp_6q12	0.899	1
15q-Del	Amp_7q21.3	0.899	1
CREBBP	NOTCH1	0.9	1
CUL3	Amp_5p12	0.9	1
DYSF	Del_14q11.2	0.9	1
FBXW7	NOTCH1	0.9	1
FBXW7	Del_3p24.1	0.9	1
FGFR3	Amp_20q11.22	0.9	1
IRS4	Amp_5p12	0.9	1
KRT17	Del_2q36.2	0.9	1
MAPK1	21q-Del	0.9	1
NOTCH1	7p-Amp	0.9	1
TIGD4	Del_16q23.3	0.9	1
TP53	Del_4q22.1	0.9	1
ZNF233	Amp_9p23	0.9	1
ZNF750	Del_7q36.1	0.9	1
12p-Amp	Del_10p15.3	0.9	1
14q-Amp	Del_4q22.1	0.9	1
20q-Amp	Amp_13q22.1	0.9	1
Amp_2q11.2	Del_14q11.2	0.9	1
Amp_18q11.2	Del_5q15	0.9	1
Del_21q22.3	Del_Xq21.33	0.9	1
CDKN2A	Amp_17q12	0.901	1
DYSF	Del_4q22.1	0.901	1
DYSF	Del_10p15.3	0.901	1
EPHA2	15q-Del	0.901	1
GAGE2A	Del_Xq21.33	0.901	1
KRTAP5-5	Del_Xq21.33	0.901	1
NFE2L2	Amp_Xq28	0.901	1
RB1	Del_Xp22.2	0.901	1
20p-Amp	Del_21q22.3	0.901	1
8p-Amp	Del_11q23.1	0.901	1
4p-Del	Del_19p13.3	0.901	1
4q-Del	Amp_5p15.33	0.901	1
Amp_2q11.2	Del_4q22.1	0.901	1
Amp_6q12	Del_4q22.1	0.901	1
Amp_8q24.21	Del_5q35.3	0.901	1
Amp_13q34	Del_4q22.1	0.901	1
Amp_13q34	Del_10p15.3	0.901	1
Amp_18q11.2	Del_21q22.3	0.901	1
ADAM19	Amp_12q15	0.902	1
ADAM19	Del_2q22.1	0.902	1
EMG1	KDM6A	0.902	1
EMG1	RASA1	0.902	1
EMG1	RB1	0.902	1
KDM6A	Del_1q44	0.902	1
KIAA1267	Del_6p25.3	0.902	1
KIAA1267	Del_9q21.11	0.902	1
MLL2	ZNF750	0.902	1
NLRP8	THSD7A	0.902	1
NLRP8	Del_4q21.3	0.902	1
RASA1	Del_1q44	0.902	1
RB1	Del_1q44	0.902	1
THSD7A	7q-Amp	0.902	1
VEZF1	Del_3p26.2	0.902	1
ZNF623	Del_6p25.3	0.902	1
7q-Amp	10p-Del	0.902	1
10p-Del	9q-Del	0.902	1
10p-Del	Xp-Del	0.902	1
10p-Del	Amp_9p23	0.902	1
10p-Del	Amp_9p13.3	0.902	1
10p-Del	Amp_15q26.3	0.902	1
4p-Del	Amp_5p12	0.902	1
Xp-Del	Del_4q21.3	0.902	1
ASXL1	KDM6A	0.903	1
ASXL1	Del_3p14.2	0.903	1
CDKN2A	8p-Amp	0.903	1
CUL3	RASA1	0.903	1
CUL3	RB1	0.903	1
KDM6A	OR6C65	0.903	1
KDM6A	PTPN14	0.903	1
KDM6A	1q-Amp	0.903	1
MLL2	8q-Amp	0.903	1
RASA1	1q-Amp	0.903	1
TIGD4	8q-Amp	0.903	1
9q-Amp	Amp_11p13	0.903	1
18q-Del	Xp-Del	0.903	1
Amp_2q31.2	Amp_11p13	0.903	1
Del_10q23.31	Del_17q25.3	0.903	1
KRT17	Del_4q22.1	0.904	1
MLL4	8p-Amp	0.904	1
8p-Del	Amp_8q24.21	0.904	1
Amp_5p15.33	Del_1q44	0.904	1
Amp_7q21.3	Del_5q12.1	0.904	1
Amp_7q21.3	Del_5q15	0.904	1
BRAF	HRAS	0.905	1
DYSF	9p-Del	0.905	1
JUB	VEZF1	0.905	1
MAPK1	8p-Amp	0.905	1
MEFV	Del_13q12.11	0.905	1
MLL2	Del_4q35.2	0.905	1
NFE2L2	RHOA	0.905	1
NFE2L2	ZNF750	0.905	1
PIK3R1	Amp_Xq28	0.905	1
VEZF1	Del_Xp22.2	0.905	1
ZNF233	20q-Amp	0.905	1
12p-Amp	Amp_20q11.22	0.905	1
3q-Del	Amp_8q24.21	0.905	1
Amp_2q31.2	Amp_5p12	0.905	1
Amp_6q12	Del_9p21.3	0.905	1
Amp_9p13.3	Del_1p13.2	0.905	1
Del_19p13.3	Del_Xq21.33	0.905	1
JUB	Del_11q23.1	0.906	1
NAP1L2	TIGD4	0.906	1
NAP1L2	ZNF233	0.906	1
TIGD4	ZNF233	0.906	1
TP53	4q-Del	0.906	1
1q-Amp	Del_5q35.3	0.906	1
9q-Amp	Del_3p14.2	0.906	1
Amp_5p15.33	Del_Xp22.2	0.906	1
Amp_5p12	Del_16q23.3	0.906	1
Amp_18p11.31	Del_17q25.3	0.906	1
HRAS	Amp_9p24.1	0.907	1
MLL4	PTEN	0.907	1
MLL4	RAC1	0.907	1
NFE2L2	NSD1	0.907	1
NSD1	Amp_6p12.1	0.907	1
NUDT11	9p-Del	0.907	1
12p-Amp	8p-Del	0.907	1
20p-Amp	Amp_Xq28	0.907	1
8p-Amp	Amp_9p24.1	0.907	1
8p-Amp	Del_13q14.2	0.907	1
5q-Del	Del_Xp22.2	0.907	1
Amp_18q11.2	Del_Xp22.2	0.907	1
Del_8p23.2	Del_10q23.31	0.907	1
ADAM19	HLA-B	0.908	1
ADAM19	TGFBR2	0.908	1
ADAM19	Del_17q25.3	0.908	1
ASXL1	EMG1	0.908	1
ASXL1	Del_1q44	0.908	1
CREBBP	KDM6A	0.908	1
CREBBP	Del_11p15.5	0.908	1
CUL3	Del_1q44	0.908	1
DYSF	HUWE1	0.908	1
DYSF	12p-Amp	0.908	1
EMG1	IRS4	0.908	1
EMG1	OR6C65	0.908	1
EMG1	PTPN14	0.908	1
EMG1	1q-Amp	0.908	1
EP300	7p-Amp	0.908	1
FBXW7	RASA1	0.908	1
FBXW7	Del_11p15.5	0.908	1
GAGE2A	SMAD4	0.908	1
GAGE2A	15q-Del	0.908	1
GAGE2A	Amp_17q12	0.908	1
HLA-A	SMAD4	0.908	1
IRS4	Del_1q44	0.908	1
KDM6A	7p-Amp	0.908	1
KDM6A	13q-Del	0.908	1
KEAP1	SMAD4	0.908	1
KEAP1	Amp_8q24.21	0.908	1
KEAP1	Amp_17q12	0.908	1
KIAA1267	Del_17q25.3	0.908	1
KRT17	PIK3R1	0.908	1
KRT17	VEZF1	0.908	1
KRT17	8p-Del	0.908	1
KRTAP5-5	SMAD4	0.908	1
KRTAP5-5	15q-Del	0.908	1
KRTAP5-5	Amp_17q12	0.908	1
MLL2	1q-Amp	0.908	1
PTPN14	Del_1q44	0.908	1
RASA1	13q-Del	0.908	1
SMAD4	9q-Amp	0.908	1
THSD7A	12p-Amp	0.908	1
12p-Amp	Amp_2q11.2	0.908	1
12p-Amp	Amp_6q12	0.908	1
12p-Amp	Amp_13q34	0.908	1
12p-Amp	Del_1p36.21	0.908	1
12p-Amp	Del_Xp21.3	0.908	1
14q-Amp	10p-Del	0.908	1
14q-Amp	Amp_2q11.2	0.908	1
1q-Amp	Del_1q44	0.908	1
8q-Amp	Amp_18p11.31	0.908	1
9q-Amp	Amp_8q24.21	0.908	1
10p-Del	Del_14q32.32	0.908	1
8p-Del	Amp_2q11.2	0.908	1
8p-Del	Amp_13q34	0.908	1
Xp-Del	Del_10p11.21	0.908	1
Amp_2q11.2	Del_21q22.3	0.908	1
Amp_6q12	Del_21q22.3	0.908	1
Amp_13q34	Del_21q22.3	0.908	1
Amp_15q26.3	Del_10p11.21	0.908	1
Del_2q21.2	Del_10p11.21	0.908	1
Del_4q22.1	Del_7q36.1	0.908	1
CREBBP	MEFV	0.909	1
CREBBP	Amp_6p12.1	0.909	1
EP300	TIGD4	0.909	1
EP300	ZNF233	0.909	1
FBXW7	NFE2L2	0.909	1
FBXW7	PIK3R1	0.909	1
FBXW7	VEZF1	0.909	1
MEFV	Amp_13q22.1	0.909	1
NAP1L2	Del_11p15.5	0.909	1
PIK3R1	13q-Del	0.909	1
PIK3R1	Amp_13q22.1	0.909	1
SMAD4	Del_2q36.2	0.909	1
TIGD4	Del_10q23.31	0.909	1
TIGD4	Del_11p15.5	0.909	1
ZNF233	Del_10q23.31	0.909	1
ZNF233	Del_11p15.5	0.909	1
20p-Amp	Del_19p13.3	0.909	1
3q-Amp	Del_14q11.2	0.909	1
13q-Del	Amp_6p12.1	0.909	1
21q-Del	Xp-Del	0.909	1
21q-Del	Del_2q21.2	0.909	1
Amp_6p12.1	Amp_13q22.1	0.909	1
Amp_17q12	Del_1p13.2	0.909	1
GAGE2A	Del_4q35.2	0.91	1
JUB	Del_18q23	0.91	1
MLL4	Del_1p13.2	0.91	1
TGFBR2	5q-Del	0.91	1
5p-Amp	Amp_11q13.3	0.91	1
5q-Del	Del_17q25.3	0.91	1
Amp_2q11.2	Amp_8q11.21	0.91	1
Amp_5p12	Del_10p11.21	0.91	1
Amp_7p11.2	Del_9p21.3	0.91	1
Amp_8q11.21	Del_3p14.2	0.91	1
Del_2q22.1	Del_3p24.1	0.91	1
Del_18q23	Del_Xp22.2	0.91	1
EPHA2	HLA-B	0.911	1
FGFR3	Amp_11p13	0.911	1
KRT17	11q-Del	0.911	1
KRT17	Del_19p13.3	0.911	1
MLL2	Del_13q12.11	0.911	1
3q-Amp	Amp_15q26.3	0.911	1
8p-Amp	Amp_7p11.2	0.911	1
Amp_2q11.2	Del_Xq21.33	0.911	1
Amp_3q26.33	Del_9q21.11	0.911	1
Amp_3q26.33	Del_Xp21.3	0.911	1
Del_2q22.1	Del_11p15.5	0.911	1
CREBBP	Amp_7q21.3	0.912	1
NFE2L2	Del_10p15.3	0.912	1
PTEN	3p-Del	0.912	1
TIGD4	Amp_5p12	0.912	1
9q-Amp	Amp_12q15	0.912	1
9q-Amp	Del_6p25.3	0.912	1
4q-Del	Amp_11q13.3	0.912	1
Amp_5p12	Amp_13q34	0.912	1
Amp_8p11.23	Del_4p16.3	0.912	1
Amp_18p11.31	Del_2q22.1	0.912	1
ASXL1	IRS4	0.913	1
ASXL1	OR6C65	0.913	1
CREBBP	Amp_8q24.21	0.913	1
CUL3	1q-Amp	0.913	1
FGFR3	PIK3CA	0.913	1
GAGE2A	Del_5q15	0.913	1
KDM6A	Amp_5p15.33	0.913	1
KRTAP5-5	Del_5q12.1	0.913	1
MLL2	18q-Del	0.913	1
NAP1L2	20p-Amp	0.913	1
NAP1L2	5q-Del	0.913	1
NSD1	Del_8p23.2	0.913	1
PIK3CA	RHOA	0.913	1
RASA1	Amp_9p13.3	0.913	1
RB1	Amp_9p13.3	0.913	1
SMAD4	Del_4q22.1	0.913	1
TIGD4	5q-Del	0.913	1
TIGD4	Amp_18q11.2	0.913	1
ZNF233	20p-Amp	0.913	1
ZNF233	Amp_18q11.2	0.913	1
ZNF750	Amp_9p24.1	0.913	1
ZNF750	Del_11q23.1	0.913	1
ZNF750	Del_16q23.1	0.913	1
15q-Del	Del_4q22.1	0.913	1
21q-Del	Amp_9p13.3	0.913	1
21q-Del	Amp_12p13.33	0.913	1
Amp_2q31.2	Del_10p15.3	0.913	1
Amp_8p11.23	Amp_9p23	0.913	1
Amp_8p11.23	Del_16q23.3	0.913	1
Amp_17q12	Del_4q22.1	0.913	1
Amp_20q11.22	Amp_Xq28	0.913	1
DYSF	Del_7q36.1	0.914	1
EPHA2	NOTCH1	0.914	1
KDM6A	THSD7A	0.914	1
MEFV	Del_1p36.21	0.914	1
MEFV	Del_4q21.3	0.914	1
NUDT11	5p-Amp	0.914	1
PIK3R1	Del_4q21.3	0.914	1
RASA1	10p-Del	0.914	1
RASA1	Del_1p36.21	0.914	1
RB1	THSD7A	0.914	1
RB1	Del_Xp21.3	0.914	1
THSD7A	VEZF1	0.914	1
VEZF1	Del_1p36.21	0.914	1
VEZF1	Del_Xp21.3	0.914	1
14q-Amp	Del_19p13.3	0.914	1
20q-Amp	Del_3p24.1	0.914	1
7q-Amp	3p-Del	0.914	1
18q-Del	Amp_5p15.33	0.914	1
3p-Del	Amp_15q26.3	0.914	1
Amp_2q11.2	Del_19p13.3	0.914	1
Amp_2q31.2	Amp_12q15	0.914	1
Amp_2q31.2	Del_9q21.11	0.914	1
Amp_8p11.23	Del_11q23.1	0.914	1
Amp_13q34	Del_7q36.1	0.914	1
Del_7q31.1	Del_19p13.3	0.914	1
ADAM19	EPHA2	0.915	1
ADAM19	GAGE2A	0.915	1
ADAM19	KRTAP5-5	0.915	1
ASXL1	JUB	0.915	1
CDKN2A	KEAP1	0.915	1
CDKN2A	8q-Amp	0.915	1
EMG1	PIK3CA	0.915	1
EPHA2	KIAA1267	0.915	1
GAGE2A	KIAA1267	0.915	1
GAGE2A	ZNF623	0.915	1
IRS4	Del_Xp22.2	0.915	1
KIAA1267	KRTAP5-5	0.915	1
KRTAP5-5	ZNF623	0.915	1
NLRP8	PTEN	0.915	1
NLRP8	3q-Del	0.915	1
OR6C65	Amp_8q11.21	0.915	1
OR6C65	Amp_Xq28	0.915	1
PIK3CA	Del_1q44	0.915	1
PTEN	Xp-Del	0.915	1
PTEN	Amp_15q26.3	0.915	1
PTPN14	Amp_8q11.21	0.915	1
1q-Amp	Amp_Xq28	0.915	1
1q-Amp	Del_Xp22.2	0.915	1
11p-Del	Amp_5p15.33	0.915	1
3q-Del	Amp_15q26.3	0.915	1
3q-Del	Del_2q21.2	0.915	1
Amp_2q31.2	Del_5q35.3	0.915	1
Amp_5p15.33	Amp_12q15	0.915	1
Amp_5p15.33	Del_6p25.3	0.915	1
BRAF	Del_14q32.32	0.916	1
DYSF	Amp_6p12.1	0.916	1
JUB	Del_1p13.2	0.916	1
MAPK1	Del_14q32.32	0.916	1
MLL2	4q-Del	0.916	1
MLL4	Del_4q22.1	0.916	1
NLRP8	8p-Amp	0.916	1
NLRP8	4q-Del	0.916	1
NOTCH1	18q-Del	0.916	1
NUDT11	Del_14q32.32	0.916	1
12p-Amp	21q-Del	0.916	1
3q-Amp	9p-Del	0.916	1
7q-Amp	8p-Amp	0.916	1
7q-Amp	4q-Del	0.916	1
4q-Del	Xp-Del	0.916	1
4q-Del	Amp_15q26.3	0.916	1
4q-Del	Del_2q21.2	0.916	1
8p-Del	Del_2q22.1	0.916	1
9q-Del	Amp_3q26.33	0.916	1
Xp-Del	Amp_3q26.33	0.916	1
Amp_2q11.2	Amp_6p12.1	0.916	1
Amp_3q26.33	Del_2q21.2	0.916	1
Amp_5p15.33	Del_16q23.1	0.916	1
Amp_6p12.1	Amp_13q34	0.916	1
Del_5q15	Del_17q25.3	0.916	1
CDKN2A	CREBBP	0.917	1
CREBBP	5q-Del	0.917	1
FGFR3	11p-Del	0.917	1
FGFR3	Del_6p25.3	0.917	1
HLA-B	18q-Del	0.917	1
HUWE1	Del_19p13.3	0.917	1
MAPK1	NSD1	0.917	1
MLL2	ZNF233	0.917	1
MLL2	4p-Del	0.917	1
MLL2	Del_6p25.3	0.917	1
NFE2L2	Del_Xp21.3	0.917	1
RASA1	Del_13q12.11	0.917	1
RHOA	Del_9q21.11	0.917	1
14q-Amp	Del_5q35.3	0.917	1
5p-Amp	10p-Del	0.917	1
7p-Amp	8q-Amp	0.917	1
7p-Amp	Amp_18q11.2	0.917	1
10p-Del	Amp_6p12.1	0.917	1
5q-Del	Amp_13q22.1	0.917	1
Amp_6p12.1	Del_4q21.3	0.917	1
Amp_7q21.3	Amp_12q15	0.917	1
Amp_11q13.3	Del_7q36.1	0.917	1
EP300	THSD7A	0.918	1
KRT17	Del_16q23.1	0.918	1
PIK3R1	Amp_18p11.31	0.918	1
RASA1	18q-Del	0.918	1
VEZF1	Amp_18p11.31	0.918	1
ZNF623	Amp_11q13.3	0.918	1
3q-Amp	Del_Xp22.2	0.918	1
8q-Amp	Del_13q14.2	0.918	1
15q-Del	Del_21q22.3	0.918	1
8p-Del	Amp_17q12	0.918	1
Amp_7q21.3	Del_3p24.1	0.918	1
Amp_8q24.21	Del_2q22.1	0.918	1
Amp_12p13.33	Del_11p15.5	0.918	1
Del_10q23.31	Del_Xp21.3	0.918	1
ADAM19	Amp_7q21.3	0.919	1
ASXL1	Del_3p24.1	0.919	1
CREBBP	Amp_11p13	0.919	1
EMG1	PTEN	0.919	1
EMG1	3q-Del	0.919	1
KRT17	NAP1L2	0.919	1
KRT17	TIGD4	0.919	1
MLL4	14q-Amp	0.919	1
PIK3CA	9q-Amp	0.919	1
RAC1	Del_1q44	0.919	1
VEZF1	21q-Del	0.919	1
1q-Amp	Del_3p24.1	0.919	1
3q-Del	Del_1q44	0.919	1
Amp_3q26.33	Amp_6p12.1	0.919	1
Amp_6p12.1	Del_21q22.3	0.919	1
Del_2q22.1	Del_13q14.2	0.919	1
ADAM19	MLL2	0.92	1
DYSF	MLL2	0.92	1
EMG1	NOTCH1	0.92	1
EP300	PTEN	0.92	1
GAGE2A	9p-Del	0.92	1
KEAP1	Del_17q25.3	0.92	1
MLL2	Del_7q31.1	0.92	1
NOTCH1	Del_1q44	0.92	1
NSD1	Amp_11p13	0.92	1
PTEN	Del_11p15.5	0.92	1
SMAD4	Del_13q12.11	0.92	1
7p-Amp	Del_9p21.3	0.92	1
3q-Del	Del_11p15.5	0.92	1
9q-Del	Del_13q14.2	0.92	1
Xp-Del	Del_4p16.3	0.92	1
Xp-Del	Del_4q35.2	0.92	1
Amp_8p11.23	Del_5q15	0.92	1
Amp_15q26.3	Del_4q35.2	0.92	1
Amp_Xq28	Del_8p23.2	0.92	1
Del_2q21.2	Del_4q35.2	0.92	1
Del_2q21.2	Del_13q14.2	0.92	1
Del_5q12.1	Del_Xq21.33	0.92	1
Del_8p23.2	Del_Xp22.2	0.92	1
ASXL1	FBXW7	0.921	1
BRAF	Amp_6p12.1	0.921	1
CREBBP	IRS4	0.921	1
CUL3	Amp_13q22.1	0.921	1
DYSF	Del_3p26.2	0.921	1
FAT1	Amp_8p11.23	0.921	1
FBXW7	IRS4	0.921	1
FBXW7	OR6C65	0.921	1
HLA-A	ZNF623	0.921	1
IRS4	7p-Amp	0.921	1
IRS4	Amp_13q22.1	0.921	1
JUB	Del_6p25.3	0.921	1
KEAP1	ZNF623	0.921	1
KIAA1267	Amp_8q24.21	0.921	1
MAPK1	NFE2L2	0.921	1
MAPK1	Amp_6p12.1	0.921	1
RASA1	21q-Del	0.921	1
VEZF1	Del_4p16.3	0.921	1
VEZF1	Del_4q35.2	0.921	1
VEZF1	Del_13q14.2	0.921	1
7p-Amp	Amp_5p15.33	0.921	1
Amp_6p12.1	Del_13q12.11	0.921	1
Amp_7q21.3	Amp_9p23	0.921	1
Amp_12q15	Amp_Xq28	0.921	1
Amp_12q15	Del_Xp22.2	0.921	1
Amp_18p11.31	Del_10p15.3	0.921	1
ASXL1	Amp_11q13.3	0.922	1
DYSF	15q-Del	0.922	1
DYSF	Amp_17q12	0.922	1
NFE2L2	NOTCH1	0.922	1
NOTCH1	RHOA	0.922	1
PTPN14	Amp_11q13.3	0.922	1
THSD7A	Amp_7q21.3	0.922	1
9q-Amp	Del_18q23	0.922	1
15q-Del	Del_7q31.1	0.922	1
15q-Del	Del_19p13.3	0.922	1
Amp_5p15.33	Del_13q12.11	0.922	1
Amp_6q12	Amp_17q12	0.922	1
Amp_8q24.21	Del_7q36.1	0.922	1
Del_2q21.2	Del_14q11.2	0.922	1
C3orf59	GAGE2A	0.923	1
C3orf59	KRTAP5-5	0.923	1
C3orf59	TGFBR2	0.923	1
C3orf59	Del_2q22.1	0.923	1
FGFR3	GAGE2A	0.923	1
FGFR3	HLA-B	0.923	1
FGFR3	KRTAP5-5	0.923	1
FGFR3	TGFBR2	0.923	1
GAGE2A	RHOA	0.923	1
HLA-B	Del_10p11.21	0.923	1
KRTAP5-5	RHOA	0.923	1
MEFV	Del_5q15	0.923	1
PIK3R1	Del_4p15.2	0.923	1
PTEN	RASA1	0.923	1
RAC1	RB1	0.923	1
RB1	3q-Del	0.923	1
RB1	Del_10p11.21	0.923	1
VEZF1	Del_4p15.2	0.923	1
VEZF1	Del_5q15	0.923	1
12p-Amp	4p-Del	0.923	1
14q-Amp	3q-Amp	0.923	1
Amp_3q26.33	Amp_6q12	0.923	1
Amp_3q26.33	Del_7q31.1	0.923	1
Amp_7q21.3	Del_13q12.11	0.923	1
Amp_9p13.3	Del_21q22.3	0.923	1
Amp_Xq28	Del_4q22.1	0.923	1
Del_10p15.3	Del_Xp22.2	0.923	1
HRAS	MEFV	0.924	1
KRTAP5-5	5p-Amp	0.924	1
MAPK1	Amp_20q11.22	0.924	1
MEFV	4q-Del	0.924	1
NAP1L2	Del_3p12.1	0.924	1
VEZF1	8p-Amp	0.924	1
ZNF750	Del_5q35.3	0.924	1
12p-Amp	8p-Amp	0.924	1
1q-Amp	Del_2q22.1	0.924	1
7q-Amp	Del_5q12.1	0.924	1
8q-Amp	Amp_9p13.3	0.924	1
8q-Amp	Amp_11q13.3	0.924	1
Xp-Del	Del_5q12.1	0.924	1
Xp-Del	Del_5q15	0.924	1
Amp_7p11.2	Amp_Xq28	0.924	1
Amp_8p11.23	Amp_13q34	0.924	1
Amp_15q26.3	Del_1p13.2	0.924	1
Amp_20q11.22	Del_3p24.1	0.924	1
CDKN2A	MEFV	0.925	1
DYSF	Del_16q23.1	0.925	1
EMG1	Del_Xq21.33	0.925	1
FAT1	MEFV	0.925	1
JUB	NAP1L2	0.925	1
KRT17	PIK3CA	0.925	1
MLL2	NOTCH1	0.925	1
NAP1L2	Del_Xp22.2	0.925	1
OR6C65	Amp_8q24.21	0.925	1
PTEN	5q-Del	0.925	1
PTPN14	Amp_8q24.21	0.925	1
TIGD4	Amp_Xq28	0.925	1
TIGD4	Del_Xp22.2	0.925	1
ZNF233	Amp_Xq28	0.925	1
ZNF750	Del_16q23.3	0.925	1
1q-Amp	Amp_8q24.21	0.925	1
20p-Amp	10p-Del	0.925	1
20p-Amp	Del_4q21.3	0.925	1
20p-Amp	Del_16q23.1	0.925	1
8q-Amp	Del_1p13.2	0.925	1
15q-Del	Amp_8q11.21	0.925	1
Amp_2q11.2	Del_16q23.1	0.925	1
Amp_9p24.1	Del_9p21.3	0.925	1
Amp_9p23	Del_Xq21.33	0.925	1
Amp_18q11.2	Del_11q23.1	0.925	1
Amp_18q11.2	Del_Xp21.3	0.925	1
Del_1q44	Del_Xq21.33	0.925	1
Del_2q22.1	Del_7q36.1	0.925	1
Del_5q35.3	Del_Xp22.2	0.925	1
ASXL1	Del_4q21.3	0.926	1
CDKN2A	NOTCH1	0.926	1
CUL3	THSD7A	0.926	1
EP300	HLA-A	0.926	1
EPHA2	Amp_8q11.21	0.926	1
IRS4	Del_4q21.3	0.926	1
IRS4	Del_Xp21.3	0.926	1
NOTCH1	Amp_15q26.3	0.926	1
OR6C65	THSD7A	0.926	1
OR6C65	Del_Xp21.3	0.926	1
TP53	Del_Xq21.33	0.926	1
1q-Amp	10p-Del	0.926	1
1q-Amp	Del_4q21.3	0.926	1
1q-Amp	Del_Xp21.3	0.926	1
Amp_11p13	Del_4q21.3	0.926	1
Amp_15q26.3	Del_Xq21.33	0.926	1
Del_4q35.2	Del_11q23.1	0.926	1
Del_10p11.21	Del_11q23.1	0.926	1
BRAF	Amp_11p13	0.927	1
KRTAP5-5	NSD1	0.927	1
MAPK1	Amp_11p13	0.927	1
NSD1	Del_10q23.31	0.927	1
RASA1	8p-Amp	0.927	1
RASA1	4q-Del	0.927	1
TP53	4p-Del	0.927	1
12p-Amp	Amp_9p24.1	0.927	1
14q-Amp	Amp_9p24.1	0.927	1
21q-Del	Del_10q23.31	0.927	1
Amp_9p24.1	Del_14q32.32	0.927	1
ADAM19	ZNF750	0.928	1
CREBBP	Amp_12q15	0.928	1
EPHA2	FGFR3	0.928	1
EPHA2	RHOA	0.928	1
KDM6A	Amp_7q21.3	0.928	1
KRT17	20q-Amp	0.928	1
TP53	Amp_9p13.3	0.928	1
5p-Amp	Amp_12q15	0.928	1
5p-Amp	Del_5q35.3	0.928	1
5p-Amp	Del_9q21.11	0.928	1
11p-Del	Del_2q36.2	0.928	1
13q-Del	Del_6p25.3	0.928	1
3q-Del	Amp_8p11.23	0.928	1
Amp_8p11.23	Amp_12p13.33	0.928	1
Amp_8q11.21	Del_1p13.2	0.928	1
Amp_9p23	Del_8p23.2	0.928	1
Amp_13q22.1	Del_6p25.3	0.928	1
Amp_18p11.31	Del_14q32.32	0.928	1
Amp_20q11.22	Del_10p15.3	0.928	1
Del_1p13.2	Del_9q21.11	0.928	1
GAGE2A	Amp_8p11.23	0.929	1
HLA-B	ZNF750	0.929	1
HRAS	PIK3CA	0.929	1
JUB	Del_13q14.2	0.929	1
MLL4	15q-Del	0.929	1
NFE2L2	Del_5q35.3	0.929	1
NSD1	18q-Del	0.929	1
ZNF233	7p-Amp	0.929	1
12p-Amp	Xp-Del	0.929	1
14q-Amp	9q-Del	0.929	1
14q-Amp	Amp_15q26.3	0.929	1
14q-Amp	Del_2q21.2	0.929	1
3q-Amp	Amp_8q24.21	0.929	1
9q-Del	Del_10p15.3	0.929	1
Xp-Del	Del_4q22.1	0.929	1
Xp-Del	Del_14q32.32	0.929	1
Amp_2q11.2	Amp_20q11.22	0.929	1
Amp_7q21.3	Del_2q36.2	0.929	1
Amp_8p11.23	Del_Xp21.3	0.929	1
Amp_8q24.21	Del_13q12.11	0.929	1
Amp_9p13.3	Amp_12p13.33	0.929	1
Amp_15q26.3	Del_3p14.2	0.929	1
Del_2q21.2	Del_3p14.2	0.929	1
Del_2q21.2	Del_4q22.1	0.929	1
Del_2q21.2	Del_8p23.2	0.929	1
Del_2q21.2	Del_10p15.3	0.929	1
Del_2q22.1	Del_14q11.2	0.929	1
Del_4p16.3	Del_Xp22.2	0.929	1
BRAF	GAGE2A	0.93	1
BRAF	KRTAP5-5	0.93	1
CDKN2A	ZNF623	0.93	1
DYSF	11p-Del	0.93	1
DYSF	Del_6p25.3	0.93	1
DYSF	Del_9q21.11	0.93	1
EMG1	SMAD4	0.93	1
EMG1	15q-Del	0.93	1
EMG1	Amp_17q12	0.93	1
FAT1	KIAA1267	0.93	1
GAGE2A	MAPK1	0.93	1
GAGE2A	NUDT11	0.93	1
KRTAP5-5	MAPK1	0.93	1
KRTAP5-5	NUDT11	0.93	1
NUDT11	Del_5q35.3	0.93	1
SMAD4	Del_1q44	0.93	1
TIGD4	Amp_3q26.33	0.93	1
3q-Amp	15q-Del	0.93	1
3q-Amp	Amp_13q22.1	0.93	1
3q-Amp	Amp_17q12	0.93	1
8p-Amp	18q-Del	0.93	1
11p-Del	Amp_2q11.2	0.93	1
11p-Del	Del_7q31.1	0.93	1
15q-Del	Del_1q44	0.93	1
18q-Del	Amp_8q11.21	0.93	1
Xp-Del	Del_18q23	0.93	1
Amp_2q11.2	Amp_12q15	0.93	1
Amp_2q11.2	Del_6p25.3	0.93	1
Amp_6q12	Amp_12q15	0.93	1
Amp_6q12	Del_6p25.3	0.93	1
Amp_8p11.23	Del_21q22.3	0.93	1
Amp_17q12	Del_1q44	0.93	1
Del_6p25.3	Del_7q31.1	0.93	1
Del_21q22.3	Del_Xp22.2	0.93	1
ASXL1	RAC1	0.931	1
CUL3	RAC1	0.931	1
CUL3	3q-Del	0.931	1
GAGE2A	Amp_20q11.22	0.931	1
HLA-B	JUB	0.931	1
IRS4	3q-Del	0.931	1
KEAP1	20p-Amp	0.931	1
KRT17	NOTCH1	0.931	1
KRTAP5-5	Amp_20q11.22	0.931	1
MLL2	11q-Del	0.931	1
MLL2	Del_8p23.2	0.931	1
MLL2	Del_19p13.3	0.931	1
OR6C65	RAC1	0.931	1
OR6C65	3q-Del	0.931	1
PTEN	1q-Amp	0.931	1
PTPN14	RAC1	0.931	1
PTPN14	3q-Del	0.931	1
SMAD4	Amp_9p24.1	0.931	1
12p-Amp	Del_9p21.3	0.931	1
1q-Amp	3q-Del	0.931	1
7p-Amp	Del_3p26.2	0.931	1
Amp_17q12	Del_16q23.1	0.931	1
Amp_Xq28	Del_17q25.3	0.931	1
ASXL1	21q-Del	0.932	1
CDKN2A	THSD7A	0.932	1
CREBBP	Del_10p15.3	0.932	1
EMG1	Amp_7p11.2	0.932	1
FAT1	Del_4q21.3	0.932	1
FAT1	Del_Xp21.3	0.932	1
KRT17	Del_10q23.31	0.932	1
MAPK1	Del_6p25.3	0.932	1
NSD1	11p-Del	0.932	1
NSD1	Del_19p13.3	0.932	1
NUDT11	11p-Del	0.932	1
NUDT11	Del_6p25.3	0.932	1
RASA1	Amp_18p11.31	0.932	1
8p-Amp	Amp_6p12.1	0.932	1
4q-Del	Amp_6p12.1	0.932	1
Amp_2q11.2	Del_11q23.1	0.932	1
Amp_9p13.3	Del_18q23	0.932	1
Amp_18q11.2	Del_9p21.3	0.932	1
CUL3	18q-Del	0.933	1
MEFV	14q-Amp	0.933	1
MEFV	Del_14q32.32	0.933	1
MLL2	Del_1q44	0.933	1
NAP1L2	10p-Del	0.933	1
NLRP8	Del_21q22.3	0.933	1
RB1	Del_14q11.2	0.933	1
THSD7A	TIGD4	0.933	1
TIGD4	10p-Del	0.933	1
TIGD4	Del_1p36.21	0.933	1
TIGD4	Del_Xp21.3	0.933	1
ZNF233	10p-Del	0.933	1
ZNF233	Del_1p36.21	0.933	1
12p-Amp	Del_13q14.2	0.933	1
14q-Amp	Amp_5p15.33	0.933	1
20p-Amp	21q-Del	0.933	1
3q-Amp	Del_4p16.3	0.933	1
8p-Del	Amp_15q26.3	0.933	1
Amp_8q11.21	Del_3p12.1	0.933	1
Amp_12q15	Del_4q22.1	0.933	1
Del_5q12.1	Del_16q23.3	0.933	1
ADAM19	HUWE1	0.934	1
FGFR3	9q-Amp	0.934	1
HLA-A	RHOA	0.934	1
HUWE1	KIAA1267	0.934	1
KEAP1	RHOA	0.934	1
OR6C65	Del_13q12.11	0.934	1
PIK3CA	RB1	0.934	1
3q-Amp	Del_7q36.1	0.934	1
8p-Amp	Del_3p14.2	0.934	1
8q-Amp	18q-Del	0.934	1
10p-Del	Amp_20q11.22	0.934	1
15q-Del	Del_8p23.2	0.934	1
9p-Del	Amp_7p11.2	0.934	1
Amp_5p12	Del_14q32.32	0.934	1
Amp_7q21.3	Amp_8q24.21	0.934	1
Amp_12p13.33	Del_14q11.2	0.934	1
Amp_17q12	Del_8p23.2	0.934	1
CDKN2A	Del_1p13.2	0.935	1
FBXW7	Del_5q35.3	0.935	1
JUB	PIK3CA	0.935	1
KRT17	20p-Amp	0.935	1
NFE2L2	NLRP8	0.935	1
NFE2L2	9q-Del	0.935	1
NFE2L2	Xp-Del	0.935	1
NFE2L2	Amp_15q26.3	0.935	1
NLRP8	Amp_6p12.1	0.935	1
RB1	Del_4p16.3	0.935	1
RB1	Del_4q35.2	0.935	1
10p-Del	Del_1p13.2	0.935	1
10p-Del	Del_2q36.2	0.935	1
9q-Del	Amp_6p12.1	0.935	1
Amp_2q11.2	Amp_9p23	0.935	1
Amp_2q11.2	Del_16q23.3	0.935	1
Amp_12q15	Del_1p36.21	0.935	1
Del_9q21.11	Del_Xp21.3	0.935	1
ADAM19	EMG1	0.936	1
ADAM19	Del_1q44	0.936	1
BRAF	HLA-B	0.936	1
BRAF	Del_17q25.3	0.936	1
EMG1	KIAA1267	0.936	1
EMG1	ZNF623	0.936	1
HLA-B	MAPK1	0.936	1
KIAA1267	Del_1q44	0.936	1
MAPK1	Del_17q25.3	0.936	1
MLL2	MLL4	0.936	1
MLL4	Del_16q23.1	0.936	1
NFE2L2	Amp_9p24.1	0.936	1
NLRP8	SMAD4	0.936	1
NLRP8	9p-Del	0.936	1
NOTCH1	Amp_2q31.2	0.936	1
NUDT11	TGFBR2	0.936	1
NUDT11	Del_17q25.3	0.936	1
SMAD4	Del_13q14.2	0.936	1
ZNF623	Del_1q44	0.936	1
ZNF750	Del_10q23.31	0.936	1
15q-Del	Xp-Del	0.936	1
15q-Del	Del_2q21.2	0.936	1
15q-Del	Del_4p16.3	0.936	1
18q-Del	Del_4q35.2	0.936	1
9p-Del	Xp-Del	0.936	1
9p-Del	Amp_15q26.3	0.936	1
Amp_7q21.3	Del_11q23.1	0.936	1
Amp_11q13.3	Amp_18p11.31	0.936	1
Amp_15q26.3	Amp_17q12	0.936	1
Amp_17q12	Del_4q35.2	0.936	1
Amp_20q11.22	Del_21q22.3	0.936	1
Amp_Xq28	Del_7q36.1	0.936	1
CREBBP	TGFBR2	0.937	1
CUL3	Del_10p11.21	0.937	1
DYSF	HLA-B	0.937	1
FAT1	3q-Del	0.937	1
FBXW7	TGFBR2	0.937	1
FBXW7	Del_3p14.2	0.937	1
FBXW7	Del_17q25.3	0.937	1
IRS4	4q-Del	0.937	1
IRS4	Del_10p11.21	0.937	1
KDM6A	Del_1p13.2	0.937	1
NAP1L2	21q-Del	0.937	1
NFE2L2	VEZF1	0.937	1
PTPN14	8p-Amp	0.937	1
PTPN14	4q-Del	0.937	1
RB1	Del_1p13.2	0.937	1
TGFBR2	Del_7q31.1	0.937	1
TIGD4	21q-Del	0.937	1
VEZF1	5p-Amp	0.937	1
12p-Amp	Del_5q15	0.937	1
5p-Amp	Del_Xq21.33	0.937	1
11p-Del	Amp_8p11.23	0.937	1
Amp_6q12	Del_5q35.3	0.937	1
Amp_8q24.21	Del_Xq21.33	0.937	1
Amp_13q34	Del_5q35.3	0.937	1
Amp_13q34	Del_17q25.3	0.937	1
Del_2q21.2	Del_3p12.1	0.937	1
Del_7q31.1	Del_17q25.3	0.937	1
ASXL1	Del_3p26.2	0.938	1
GAGE2A	MEFV	0.938	1
GAGE2A	PIK3R1	0.938	1
GAGE2A	VEZF1	0.938	1
KDM6A	14q-Amp	0.938	1
KRTAP5-5	MEFV	0.938	1
KRTAP5-5	PIK3R1	0.938	1
KRTAP5-5	VEZF1	0.938	1
1q-Amp	Del_3p26.2	0.938	1
20q-Amp	Del_10q23.31	0.938	1
11q-Del	9q-Del	0.938	1
11q-Del	Amp_15q26.3	0.938	1
9q-Del	Del_7q36.1	0.938	1
Xp-Del	Del_7q36.1	0.938	1
Amp_7p11.2	Del_2q22.1	0.938	1
Amp_8p11.23	Del_7q36.1	0.938	1
Amp_11q13.3	Amp_15q26.3	0.938	1
Del_2q21.2	Del_7q36.1	0.938	1
FBXW7	Del_4p16.3	0.939	1
FBXW7	Del_4q35.2	0.939	1
HUWE1	Del_9q21.11	0.939	1
JUB	3q-Del	0.939	1
KEAP1	Del_4p16.3	0.939	1
RASA1	Del_5q15	0.939	1
RB1	Del_4p15.2	0.939	1
RB1	Del_5q12.1	0.939	1
RHOA	ZNF750	0.939	1
SMAD4	Amp_9p23	0.939	1
SMAD4	Del_5q12.1	0.939	1
12p-Amp	Amp_9p23	0.939	1
14q-Amp	Amp_9p23	0.939	1
20p-Amp	Del_16q23.3	0.939	1
15q-Del	Del_4p15.2	0.939	1
21q-Del	Amp_8p11.23	0.939	1
9p-Del	Amp_2q31.2	0.939	1
Amp_7q21.3	Del_3p14.2	0.939	1
Amp_13q22.1	Del_4p16.3	0.939	1
Amp_17q12	Del_5q15	0.939	1
Amp_18p11.31	Del_8p23.2	0.939	1
Amp_18q11.2	Del_16q23.3	0.939	1
Del_9q21.11	Del_21q22.3	0.939	1
ADAM19	MLL4	0.94	1
ADAM19	Del_13q12.11	0.94	1
BRAF	PIK3CA	0.94	1
EP300	MLL2	0.94	1
FBXW7	MLL2	0.94	1
MAPK1	PIK3CA	0.94	1
NSD1	PIK3R1	0.94	1
NUDT11	3p-Del	0.94	1
PIK3R1	Amp_11q13.3	0.94	1
SMAD4	Del_3p12.1	0.94	1
SMAD4	Del_11q23.1	0.94	1
THSD7A	Del_4q22.1	0.94	1
TIGD4	Del_3p26.2	0.94	1
20q-Amp	Amp_2q11.2	0.94	1
20q-Amp	Amp_13q34	0.94	1
3q-Amp	Del_5q12.1	0.94	1
3q-Amp	Del_Xp21.3	0.94	1
7p-Amp	Amp_3q26.33	0.94	1
9q-Amp	18q-Del	0.94	1
10p-Del	Del_18q23	0.94	1
4p-Del	Amp_13q22.1	0.94	1
4q-Del	Amp_11p13	0.94	1
Amp_11p13	Del_5q35.3	0.94	1
CUL3	Amp_7q21.3	0.941	1
EPHA2	MAPK1	0.941	1
HRAS	ZNF233	0.941	1
IRS4	Amp_7q21.3	0.941	1
NLRP8	Amp_11p13	0.941	1
PIK3R1	Amp_11p13	0.941	1
RB1	Del_4q22.1	0.941	1
TIGD4	8p-Amp	0.941	1
TIGD4	4q-Del	0.941	1
VEZF1	Amp_11p13	0.941	1
1q-Amp	Amp_7q21.3	0.941	1
10p-Del	Del_9p21.3	0.941	1
4p-Del	Amp_6q12	0.941	1
9q-Del	Amp_11p13	0.941	1
Amp_5p12	Del_2q36.2	0.941	1
Amp_5p12	Del_16q23.1	0.941	1
BRAF	CASP8	0.942	1
C3orf59	Del_1q44	0.942	1
CASP8	MAPK1	0.942	1
CDKN2A	Amp_2q31.2	0.942	1
CDKN2A	Amp_5p12	0.942	1
EMG1	FGFR3	0.942	1
EMG1	RHOA	0.942	1
FGFR3	Del_1q44	0.942	1
GAGE2A	Del_3p14.2	0.942	1
GAGE2A	Del_8p23.2	0.942	1
HRAS	NOTCH1	0.942	1
KDM6A	15q-Del	0.942	1
MEFV	Amp_8p11.23	0.942	1
NOTCH1	Del_Xq21.33	0.942	1
NUDT11	Del_3p14.2	0.942	1
NUDT11	Del_8p23.2	0.942	1
RB1	15q-Del	0.942	1
RHOA	Del_1q44	0.942	1
VEZF1	Amp_8p11.23	0.942	1
1q-Amp	Del_14q11.2	0.942	1
20q-Amp	15q-Del	0.942	1
20q-Amp	Del_3p14.2	0.942	1
20q-Amp	Del_8p23.2	0.942	1
5q-Del	Amp_8q24.21	0.942	1
Amp_15q26.3	Del_3p24.1	0.942	1
Del_2q21.2	Del_3p24.1	0.942	1
HLA-B	Del_10p15.3	0.943	1
KRTAP5-5	Del_2q22.1	0.943	1
TIGD4	Amp_18p11.31	0.943	1
5p-Amp	Xp-Del	0.943	1
11q-Del	Amp_5p15.33	0.943	1
21q-Del	Amp_20q11.22	0.943	1
Amp_8p11.23	Del_Xq21.33	0.943	1
Del_4q21.3	Del_17q25.3	0.943	1
Del_17q25.3	Del_Xp21.3	0.943	1
CREBBP	RAC1	0.944	1
FBXW7	11q-Del	0.944	1
FBXW7	Del_4p15.2	0.944	1
FBXW7	Del_5q12.1	0.944	1
KDM6A	NFE2L2	0.944	1
NFE2L2	RASA1	0.944	1
NOTCH1	Del_2q22.1	0.944	1
NSD1	Amp_7q21.3	0.944	1
PTEN	Amp_13q22.1	0.944	1
RB1	Amp_6p12.1	0.944	1
TP53	3q-Del	0.944	1
ZNF233	Del_14q11.2	0.944	1
11q-Del	Del_6p25.3	0.944	1
11q-Del	Del_10p11.21	0.944	1
13q-Del	Del_7q36.1	0.944	1
3q-Del	Amp_13q22.1	0.944	1
Amp_9p24.1	Del_8p23.2	0.944	1
Amp_18p11.31	Del_1p36.21	0.944	1
Del_1q44	Del_13q12.11	0.944	1
Del_2q22.1	Del_3p12.1	0.944	1
Del_4q35.2	Del_7q36.1	0.944	1
Del_5q35.3	Del_Xp21.3	0.944	1
Del_10p11.21	Del_13q14.2	0.944	1
Del_10p11.21	Del_19p13.3	0.944	1
ADAM19	Del_2q21.2	0.945	1
ADAM19	Del_16q23.1	0.945	1
CDKN2A	Del_10p15.3	0.945	1
CREBBP	EPHA2	0.945	1
DYSF	EP300	0.945	1
EPHA2	FBXW7	0.945	1
FGFR3	Del_7q31.1	0.945	1
GAGE2A	Amp_12p13.33	0.945	1
HUWE1	RB1	0.945	1
JUB	THSD7A	0.945	1
JUB	Del_1p36.21	0.945	1
KDM6A	8p-Del	0.945	1
KIAA1267	9q-Del	0.945	1
KIAA1267	Amp_15q26.3	0.945	1
KIAA1267	Del_2q21.2	0.945	1
KRTAP5-5	Amp_9p13.3	0.945	1
MEFV	11p-Del	0.945	1
MLL2	3q-Del	0.945	1
MLL4	TGFBR2	0.945	1
NAP1L2	Del_4p16.3	0.945	1
NFE2L2	12p-Amp	0.945	1
PIK3R1	11p-Del	0.945	1
PIK3R1	Del_9q21.11	0.945	1
RHOA	Del_7q31.1	0.945	1
TIGD4	Del_4p16.3	0.945	1
VEZF1	Del_6p25.3	0.945	1
ZNF623	Xp-Del	0.945	1
ZNF623	Del_2q21.2	0.945	1
3q-Amp	5q-Del	0.945	1
7q-Amp	Amp_5p12	0.945	1
18q-Del	Amp_8q24.21	0.945	1
Amp_2q11.2	Del_11p15.5	0.945	1
Amp_5p12	Amp_15q26.3	0.945	1
Amp_5p12	Del_3p14.2	0.945	1
Amp_6q12	Del_11p15.5	0.945	1
Amp_7p11.2	Del_1p13.2	0.945	1
Amp_9p24.1	Amp_11p13	0.945	1
Amp_11q13.3	Del_21q22.3	0.945	1
Del_2q22.1	Del_3p26.2	0.945	1
Del_4q21.3	Del_Xp22.2	0.945	1
C3orf59	Del_4q22.1	0.946	1
GAGE2A	NAP1L2	0.946	1
GAGE2A	Del_3p12.1	0.946	1
HUWE1	Del_4q21.3	0.946	1
KEAP1	NUDT11	0.946	1
KRTAP5-5	NAP1L2	0.946	1
KRTAP5-5	TIGD4	0.946	1
KRTAP5-5	ZNF233	0.946	1
MAPK1	NOTCH1	0.946	1
MAPK1	9q-Amp	0.946	1
NSD1	7q-Amp	0.946	1
NSD1	Xp-Del	0.946	1
NUDT11	9q-Amp	0.946	1
15q-Del	Del_11p15.5	0.946	1
8p-Del	Del_4q21.3	0.946	1
Amp_2q31.2	Del_Xq21.33	0.946	1
Amp_8q11.21	Del_3p24.1	0.946	1
Amp_9p24.1	Del_2q21.2	0.946	1
Del_2q21.2	Del_16q23.1	0.946	1
Del_7q31.1	Del_13q12.11	0.946	1
BRAF	EMG1	0.947	1
BRAF	Del_1q44	0.947	1
EMG1	MAPK1	0.947	1
EMG1	NUDT11	0.947	1
GAGE2A	18q-Del	0.947	1
HUWE1	Del_17q25.3	0.947	1
JUB	Del_2q22.1	0.947	1
KEAP1	Del_Xp22.2	0.947	1
KRT17	13q-Del	0.947	1
KRTAP5-5	18q-Del	0.947	1
MAPK1	Del_1q44	0.947	1
NAP1L2	Del_4p15.2	0.947	1
NLRP8	Del_9q21.11	0.947	1
NSD1	Amp_5p15.33	0.947	1
NUDT11	Del_1q44	0.947	1
NUDT11	Del_3p12.1	0.947	1
TIGD4	Del_4p15.2	0.947	1
TIGD4	Del_5q12.1	0.947	1
TIGD4	Del_5q15	0.947	1
TP53	5p-Amp	0.947	1
ZNF233	Del_4p15.2	0.947	1
ZNF233	Del_5q12.1	0.947	1
12p-Amp	1q-Amp	0.947	1
1q-Amp	Del_14q32.32	0.947	1
7q-Amp	Del_6p25.3	0.947	1
7q-Amp	Del_9q21.11	0.947	1
21q-Del	Del_11q23.1	0.947	1
Xp-Del	Amp_12q15	0.947	1
Amp_18p11.31	Del_5q15	0.947	1
Amp_18q11.2	Amp_20q11.22	0.947	1
Del_2q21.2	Del_6p25.3	0.947	1
Del_17q25.3	Del_21q22.3	0.947	1
ASXL1	15q-Del	0.948	1
ASXL1	Amp_17q12	0.948	1
CUL3	Amp_17q12	0.948	1
CUL3	Del_1p13.2	0.948	1
CUL3	Del_2q36.2	0.948	1
GAGE2A	Del_3p24.1	0.948	1
NFE2L2	Del_2q22.1	0.948	1
PTEN	THSD7A	0.948	1
PTEN	10p-Del	0.948	1
PTEN	Del_1p36.21	0.948	1
PTPN14	SMAD4	0.948	1
PTPN14	Amp_17q12	0.948	1
RAC1	10p-Del	0.948	1
10p-Del	3q-Del	0.948	1
21q-Del	Del_17q25.3	0.948	1
3q-Del	Del_1p36.21	0.948	1
4p-Del	Amp_8p11.23	0.948	1
Amp_6p12.1	Del_2q22.1	0.948	1
Amp_13q34	Del_8p23.2	0.948	1
Del_6p25.3	Del_9p21.3	0.948	1
C3orf59	HUWE1	0.949	1
CUL3	Del_4q35.2	0.949	1
DYSF	HLA-A	0.949	1
EP300	Del_2q36.2	0.949	1
KDM6A	9p-Del	0.949	1
KEAP1	Amp_6q12	0.949	1
OR6C65	Del_13q14.2	0.949	1
PIK3R1	Del_17q25.3	0.949	1
PTPN14	Del_13q14.2	0.949	1
20p-Amp	Amp_13q34	0.949	1
9q-Del	Amp_8p11.23	0.949	1
Amp_7q21.3	Del_14q11.2	0.949	1
Amp_8p11.23	Amp_15q26.3	0.949	1
Amp_8q11.21	Amp_13q22.1	0.949	1
Amp_18q11.2	Del_7q31.1	0.949	1
Amp_20q11.22	Del_10p11.21	0.949	1
Del_2q36.2	Del_10p15.3	0.949	1
Del_5q15	Del_19p13.3	0.949	1
BRAF	ZNF750	0.95	1
C3orf59	MLL4	0.95	1
CDKN2A	Amp_6q12	0.95	1
CUL3	PIK3CA	0.95	1
DYSF	3p-Del	0.95	1
EP300	FAT1	0.95	1
KDM6A	Del_8p23.2	0.95	1
KRT17	THSD7A	0.95	1
KRT17	Del_1p36.21	0.95	1
KRT17	Del_4q21.3	0.95	1
MLL2	THSD7A	0.95	1
MLL2	7q-Amp	0.95	1
MLL2	Del_4p16.3	0.95	1
MLL4	RHOA	0.95	1
NUDT11	Del_3p24.1	0.95	1
NUDT11	Del_10p11.21	0.95	1
SMAD4	5q-Del	0.95	1
3q-Amp	Del_16q23.1	0.95	1
15q-Del	5q-Del	0.95	1
3p-Del	Amp_2q11.2	0.95	1
3p-Del	Amp_13q34	0.95	1
4p-Del	Amp_11q13.3	0.95	1
Amp_7q21.3	Amp_8p11.23	0.95	1
Amp_11q13.3	Del_7q31.1	0.95	1
Amp_17q12	Amp_18q11.2	0.95	1
Amp_Xq28	Del_Xq21.33	0.95	1
ADAM19	KDM6A	0.951	1
ADAM19	RB1	0.951	1
ADAM19	Del_16q23.3	0.951	1
ASXL1	Del_4q22.1	0.951	1
GAGE2A	Amp_7q21.3	0.951	1
IRS4	Del_10p15.3	0.951	1
JUB	21q-Del	0.951	1
NFE2L2	TIGD4	0.951	1
RB1	ZNF623	0.951	1
THSD7A	13q-Del	0.951	1
TIGD4	Amp_6p12.1	0.951	1
TP53	Del_10p15.3	0.951	1
ZNF233	Amp_6p12.1	0.951	1
ZNF623	Del_16q23.3	0.951	1
1q-Amp	Del_4q22.1	0.951	1
20p-Amp	Del_10q23.31	0.951	1
5p-Amp	Del_5q12.1	0.951	1
10p-Del	Del_19p13.3	0.951	1
3q-Del	Del_2q22.1	0.951	1
Amp_3q26.33	Amp_18q11.2	0.951	1
Amp_9p13.3	Amp_Xq28	0.951	1
Amp_12p13.33	Del_Xp22.2	0.951	1
Amp_13q22.1	Del_1p36.21	0.951	1
Amp_18q11.2	Del_11p15.5	0.951	1
Del_1p36.21	Del_7q36.1	0.951	1
Del_1q44	Del_4p16.3	0.951	1
Del_4q21.3	Del_7q36.1	0.951	1
ADAM19	Del_13q14.2	0.952	1
CUL3	NFE2L2	0.952	1
EMG1	Del_5q12.1	0.952	1
EMG1	Del_5q15	0.952	1
FBXW7	9q-Amp	0.952	1
HLA-B	9q-Del	0.952	1
IRS4	Amp_6p12.1	0.952	1
MEFV	Del_11q23.1	0.952	1
NLRP8	TGFBR2	0.952	1
NSD1	Del_14q11.2	0.952	1
PIK3R1	4p-Del	0.952	1
PIK3R1	Del_11q23.1	0.952	1
TGFBR2	Del_7q36.1	0.952	1
VEZF1	4p-Del	0.952	1
1q-Amp	Amp_6p12.1	0.952	1
1q-Amp	Del_5q12.1	0.952	1
20q-Amp	Amp_6p12.1	0.952	1
7q-Amp	Del_17q25.3	0.952	1
11q-Del	Del_17q25.3	0.952	1
9q-Del	Del_17q25.3	0.952	1
Xp-Del	Del_17q25.3	0.952	1
Amp_2q31.2	Del_3p14.2	0.952	1
Amp_3q26.33	Del_8p23.2	0.952	1
Del_1q44	Del_4p15.2	0.952	1
Del_7q36.1	Del_17q25.3	0.952	1
CDKN2A	JUB	0.953	1
EMG1	MEFV	0.953	1
EMG1	PIK3R1	0.953	1
EMG1	VEZF1	0.953	1
EPHA2	MEFV	0.953	1
GAGE2A	KRT17	0.953	1
MEFV	Del_1q44	0.953	1
MLL4	Del_10q23.31	0.953	1
NUDT11	Amp_7q21.3	0.953	1
PIK3R1	Del_1q44	0.953	1
PTEN	Del_3p14.2	0.953	1
VEZF1	Del_1q44	0.953	1
ZNF750	Amp_3q26.33	0.953	1
ZNF750	Del_5q15	0.953	1
20q-Amp	Del_21q22.3	0.953	1
11p-Del	Del_16q23.1	0.953	1
Amp_7p11.2	Del_10p15.3	0.953	1
Amp_20q11.22	Del_2q21.2	0.953	1
C3orf59	Del_2q21.2	0.954	1
CASP8	FBXW7	0.954	1
CREBBP	Del_Xq21.33	0.954	1
FGFR3	7q-Amp	0.954	1
NLRP8	RHOA	0.954	1
NUDT11	TP53	0.954	1
3q-Amp	Del_2q22.1	0.954	1
13q-Del	Del_2q22.1	0.954	1
18q-Del	Amp_7q21.3	0.954	1
Xp-Del	Amp_9p23	0.954	1
Amp_5p12	Amp_11q13.3	0.954	1
Del_5q35.3	Del_19p13.3	0.954	1
BRAF	DYSF	0.955	1
CUL3	8p-Del	0.955	1
DYSF	NUDT11	0.955	1
GAGE2A	Del_2q36.2	0.955	1
NUDT11	Amp_6q12	0.955	1
ZNF750	Del_7q31.1	0.955	1
ZNF750	Del_Xp22.2	0.955	1
12p-Amp	20p-Amp	0.955	1
12p-Amp	5q-Del	0.955	1
20p-Amp	Del_14q32.32	0.955	1
20q-Amp	Amp_3q26.33	0.955	1
Amp_2q11.2	Del_18q23	0.955	1
Amp_11q13.3	Del_9q21.11	0.955	1
Amp_13q34	Del_3p12.1	0.955	1
Amp_18q11.2	Del_1p13.2	0.955	1
Del_9p21.3	Del_13q14.2	0.955	1
ADAM19	CUL3	0.956	1
ADAM19	OR6C65	0.956	1
ADAM19	1q-Amp	0.956	1
ASXL1	ZNF623	0.956	1
CREBBP	9p-Del	0.956	1
FBXW7	9p-Del	0.956	1
HLA-A	MLL2	0.956	1
HRAS	KRT17	0.956	1
IRS4	KIAA1267	0.956	1
KDM6A	Del_3p12.1	0.956	1
KIAA1267	OR6C65	0.956	1
KRT17	8p-Amp	0.956	1
KRT17	4q-Del	0.956	1
MLL2	9q-Amp	0.956	1
PTEN	4q-Del	0.956	1
PTPN14	ZNF623	0.956	1
RASA1	Del_3p12.1	0.956	1
RASA1	Del_16q23.1	0.956	1
RB1	Amp_9p24.1	0.956	1
THSD7A	3p-Del	0.956	1
14q-Amp	Amp_7q21.3	0.956	1
3q-Amp	11p-Del	0.956	1
5p-Amp	Amp_Xq28	0.956	1
8p-Del	Del_13q12.11	0.956	1
9p-Del	Del_1q44	0.956	1
Amp_5p12	Amp_11p13	0.956	1
Amp_8q24.21	Del_10p11.21	0.956	1
Amp_11p13	Del_5q12.1	0.956	1
Amp_11p13	Del_5q15	0.956	1
Del_13q12.11	Del_17q25.3	0.956	1
ADAM19	Del_11p15.5	0.957	1
DYSF	TP53	0.957	1
FGFR3	Amp_9p24.1	0.957	1
FGFR3	Del_13q12.11	0.957	1
GAGE2A	Del_4q22.1	0.957	1
HLA-A	MEFV	0.957	1
HLA-A	Del_Xp21.3	0.957	1
KDM6A	NSD1	0.957	1
KEAP1	VEZF1	0.957	1
MLL4	5q-Del	0.957	1
NFE2L2	Amp_11p13	0.957	1
NOTCH1	Amp_2q11.2	0.957	1
NSD1	Del_2q36.2	0.957	1
NUDT11	Amp_5p12	0.957	1
PIK3R1	9q-Amp	0.957	1
SMAD4	Del_9p21.3	0.957	1
THSD7A	10p-Del	0.957	1
THSD7A	Del_4q21.3	0.957	1
TIGD4	5p-Amp	0.957	1
12p-Amp	Del_6p25.3	0.957	1
14q-Amp	5p-Amp	0.957	1
1q-Amp	Amp_11p13	0.957	1
5p-Amp	Amp_9p23	0.957	1
5p-Amp	Del_14q32.32	0.957	1
7p-Amp	21q-Del	0.957	1
8p-Amp	Amp_5p15.33	0.957	1
8p-Amp	Amp_Xq28	0.957	1
8q-Amp	Amp_12q15	0.957	1
9q-Amp	10p-Del	0.957	1
11q-Del	21q-Del	0.957	1
Amp_5p12	Amp_7p11.2	0.957	1
Amp_9p23	Del_Xp22.2	0.957	1
Amp_17q12	Del_9p21.3	0.957	1
Del_4q21.3	Del_Xp21.3	0.957	1
CASP8	MEFV	0.958	1
EP300	8p-Del	0.958	1
HUWE1	KRTAP5-5	0.958	1
JUB	Del_13q12.11	0.958	1
KRTAP5-5	Del_21q22.3	0.958	1
NAP1L2	11p-Del	0.958	1
NAP1L2	Del_6p25.3	0.958	1
TIGD4	11p-Del	0.958	1
TIGD4	Del_6p25.3	0.958	1
VEZF1	Del_2q22.1	0.958	1
ZNF233	11p-Del	0.958	1
ZNF233	Del_6p25.3	0.958	1
1q-Amp	11q-Del	0.958	1
1q-Amp	Del_7q36.1	0.958	1
3q-Amp	8p-Amp	0.958	1
7q-Amp	Del_5q35.3	0.958	1
Amp_2q31.2	Amp_7q21.3	0.958	1
Amp_5p15.33	Amp_Xq28	0.958	1
Amp_8q24.21	Del_2q36.2	0.958	1
Amp_18p11.31	Amp_20q11.22	0.958	1
Amp_18q11.2	Del_5q12.1	0.958	1
C3orf59	KDM6A	0.959	1
EMG1	NAP1L2	0.959	1
EMG1	TIGD4	0.959	1
EMG1	ZNF233	0.959	1
HLA-B	RASA1	0.959	1
HRAS	HUWE1	0.959	1
KDM6A	RHOA	0.959	1
KDM6A	Del_3p24.1	0.959	1
KEAP1	Del_10p15.3	0.959	1
MAPK1	MLL4	0.959	1
MLL4	NUDT11	0.959	1
NOTCH1	TGFBR2	0.959	1
RB1	TGFBR2	0.959	1
RB1	Del_3p24.1	0.959	1
TIGD4	Del_1q44	0.959	1
TP53	Del_9q21.11	0.959	1
ZNF233	Del_1q44	0.959	1
20p-Amp	Del_10p15.3	0.959	1
5p-Amp	9q-Amp	0.959	1
5p-Amp	Del_1q44	0.959	1
9q-Amp	Del_10p15.3	0.959	1
Amp_3q26.33	Amp_8p11.23	0.959	1
Amp_6p12.1	Del_10p11.21	0.959	1
Amp_8q11.21	Del_Xp21.3	0.959	1
Amp_18p11.31	Del_9q21.11	0.959	1
Amp_Xq28	Del_18q23	0.959	1
ADAM19	5q-Del	0.96	1
GAGE2A	11q-Del	0.96	1
GAGE2A	Del_7q36.1	0.96	1
GAGE2A	Del_19p13.3	0.96	1
KDM6A	Amp_8p11.23	0.96	1
KRTAP5-5	Del_19p13.3	0.96	1
NSD1	Del_2q22.1	0.96	1
NUDT11	Del_10p15.3	0.96	1
PIK3R1	ZNF750	0.96	1
PTEN	SMAD4	0.96	1
PTEN	Amp_17q12	0.96	1
PTEN	Del_10p11.21	0.96	1
PTEN	Del_14q11.2	0.96	1
RASA1	Amp_7p11.2	0.96	1
1q-Amp	9p-Del	0.96	1
7q-Amp	Del_9p21.3	0.96	1
10p-Del	Del_16q23.1	0.96	1
11q-Del	Del_1p13.2	0.96	1
11q-Del	Del_2q36.2	0.96	1
15q-Del	Del_Xp22.2	0.96	1
3q-Del	Amp_17q12	0.96	1
Xp-Del	Del_9p21.3	0.96	1
Amp_2q11.2	Del_4q35.2	0.96	1
Amp_7q21.3	Del_18q23	0.96	1
Amp_8p11.23	Del_3p14.2	0.96	1
Amp_8p11.23	Del_8p23.2	0.96	1
Amp_8q24.21	Del_5q15	0.96	1
Amp_11q13.3	Amp_17q12	0.96	1
Amp_12p13.33	Del_2q36.2	0.96	1
Amp_13q34	Del_4p16.3	0.96	1
Amp_13q34	Del_4q35.2	0.96	1
Amp_15q26.3	Del_9p21.3	0.96	1
Amp_17q12	Amp_Xq28	0.96	1
Del_2q36.2	Del_7q36.1	0.96	1
Del_16q23.1	Del_17q25.3	0.96	1
BRAF	MLL2	0.961	1
DYSF	Del_7q31.1	0.961	1
EP300	Amp_2q31.2	0.961	1
KRT17	14q-Amp	0.961	1
MEFV	PIK3CA	0.961	1
NAP1L2	TGFBR2	0.961	1
NFE2L2	5q-Del	0.961	1
OR6C65	Amp_12q15	0.961	1
OR6C65	Del_6p25.3	0.961	1
OR6C65	Del_9q21.11	0.961	1
PTPN14	11p-Del	0.961	1
PTPN14	Del_9q21.11	0.961	1
TGFBR2	TIGD4	0.961	1
1q-Amp	Amp_12q15	0.961	1
1q-Amp	Del_6p25.3	0.961	1
20p-Amp	Amp_6p12.1	0.961	1
5p-Amp	Amp_9p13.3	0.961	1
8p-Amp	Amp_5p12	0.961	1
9q-Amp	21q-Del	0.961	1
21q-Del	Del_Xq21.33	0.961	1
4p-Del	Del_2q21.2	0.961	1
Xp-Del	Del_10q23.31	0.961	1
Amp_3q26.33	Amp_12q15	0.961	1
Amp_5p15.33	Del_2q21.2	0.961	1
Amp_6p12.1	Amp_18q11.2	0.961	1
Amp_7p11.2	Amp_8q11.21	0.961	1
Amp_11q13.3	Del_11p15.5	0.961	1
Del_2q22.1	Del_4q22.1	0.961	1
Del_2q22.1	Del_10p15.3	0.961	1
CREBBP	HRAS	0.962	1
DYSF	Del_9p21.3	0.962	1
FAT1	TP53	0.962	1
FBXW7	4q-Del	0.962	1
HLA-A	Del_2q21.2	0.962	1
JUB	Amp_6q12	0.962	1
KEAP1	NLRP8	0.962	1
KEAP1	NSD1	0.962	1
MLL2	Amp_5p12	0.962	1
NFE2L2	Amp_12q15	0.962	1
NUDT11	8p-Del	0.962	1
RASA1	Amp_9p23	0.962	1
ZNF233	Amp_20q11.22	0.962	1
20q-Amp	Amp_Xq28	0.962	1
7p-Amp	8p-Amp	0.962	1
Amp_2q11.2	Del_9p21.3	0.962	1
Amp_5p15.33	Del_4q22.1	0.962	1
Amp_6p12.1	Del_9q21.11	0.962	1
Amp_7p11.2	Amp_11q13.3	0.962	1
C3orf59	OR6C65	0.963	1
CREBBP	Amp_9p23	0.963	1
EMG1	Amp_20q11.22	0.963	1
EPHA2	RB1	0.963	1
FBXW7	SMAD4	0.963	1
FGFR3	1q-Amp	0.963	1
IRS4	RHOA	0.963	1
KRT17	3q-Amp	0.963	1
MAPK1	7q-Amp	0.963	1
NLRP8	NUDT11	0.963	1
NUDT11	7q-Amp	0.963	1
NUDT11	Xp-Del	0.963	1
NUDT11	Del_2q21.2	0.963	1
OR6C65	RHOA	0.963	1
OR6C65	8q-Amp	0.963	1
PTEN	Del_14q32.32	0.963	1
RAC1	Del_14q32.32	0.963	1
RHOA	Amp_9p23	0.963	1
SMAD4	13q-Del	0.963	1
12p-Amp	3q-Del	0.963	1
12p-Amp	Del_17q25.3	0.963	1
7p-Amp	Amp_9p23	0.963	1
13q-Del	Amp_17q12	0.963	1
4q-Del	Del_7q36.1	0.963	1
4q-Del	Del_19p13.3	0.963	1
Amp_2q11.2	Del_4p15.2	0.963	1
Amp_5p12	Amp_7q21.3	0.963	1
Amp_6p12.1	Amp_7q21.3	0.963	1
Amp_13q22.1	Amp_17q12	0.963	1
Del_2q36.2	Del_4q35.2	0.963	1
Del_14q32.32	Del_17q25.3	0.963	1
CDKN2A	Amp_8q11.21	0.964	1
DYSF	PIK3R1	0.964	1
EPHA2	NAP1L2	0.964	1
EPHA2	TIGD4	0.964	1
EPHA2	ZNF233	0.964	1
KRT17	NFE2L2	0.964	1
KRTAP5-5	Amp_9p24.1	0.964	1
PIK3R1	Amp_13q34	0.964	1
VEZF1	Amp_6q12	0.964	1
12p-Amp	Del_2q36.2	0.964	1
14q-Amp	Del_1p13.2	0.964	1
1q-Amp	Del_16q23.1	0.964	1
20p-Amp	Amp_15q26.3	0.964	1
20p-Amp	Del_2q21.2	0.964	1
20p-Amp	Del_8p23.2	0.964	1
7q-Amp	5q-Del	0.964	1
8q-Amp	Amp_13q34	0.964	1
8q-Amp	Amp_17q12	0.964	1
11q-Del	Del_4q22.1	0.964	1
11q-Del	Del_9p21.3	0.964	1
15q-Del	Amp_3q26.33	0.964	1
18q-Del	Del_1p13.2	0.964	1
5q-Del	Xp-Del	0.964	1
5q-Del	Amp_15q26.3	0.964	1
9q-Del	Amp_18q11.2	0.964	1
Amp_2q31.2	Amp_11q13.3	0.964	1
Amp_2q31.2	Del_9p21.3	0.964	1
Amp_7q21.3	Del_Xp22.2	0.964	1
Amp_11q13.3	Del_4q22.1	0.964	1
Amp_17q12	Del_5q35.3	0.964	1
Amp_18q11.2	Del_8p23.2	0.964	1
Del_2q36.2	Del_14q32.32	0.964	1
Del_10p15.3	Del_19p13.3	0.964	1
CREBBP	Amp_6q12	0.965	1
EMG1	KRT17	0.965	1
FAT1	GAGE2A	0.965	1
FGFR3	Amp_3q26.33	0.965	1
HLA-A	8p-Amp	0.965	1
HLA-A	Amp_8p11.23	0.965	1
IRS4	5p-Amp	0.965	1
KEAP1	Amp_8p11.23	0.965	1
KRT17	Del_1q44	0.965	1
OR6C65	5p-Amp	0.965	1
PTEN	Amp_3q26.33	0.965	1
PTPN14	Del_17q25.3	0.965	1
1q-Amp	Del_17q25.3	0.965	1
7p-Amp	Amp_6q12	0.965	1
8q-Amp	Amp_13q22.1	0.965	1
13q-Del	Del_10p11.21	0.965	1
3q-Del	Del_11q23.1	0.965	1
8p-Del	Del_14q11.2	0.965	1
Amp_3q26.33	Amp_18p11.31	0.965	1
Amp_12p13.33	Del_4q22.1	0.965	1
Del_1q44	Del_5q35.3	0.965	1
ADAM19	3q-Del	0.966	1
CREBBP	NSD1	0.966	1
DYSF	MLL4	0.966	1
HLA-B	Del_9p21.3	0.966	1
NOTCH1	PIK3R1	0.966	1
OR6C65	Del_8p23.2	0.966	1
PTPN14	Del_8p23.2	0.966	1
THSD7A	15q-Del	0.966	1
ZNF750	7q-Amp	0.966	1
ZNF750	Del_10p15.3	0.966	1
8q-Amp	Del_17q25.3	0.966	1
15q-Del	4p-Del	0.966	1
15q-Del	Del_1p36.21	0.966	1
15q-Del	Del_4q21.3	0.966	1
4p-Del	Del_1q44	0.966	1
5q-Del	Amp_2q31.2	0.966	1
5q-Del	Amp_11p13	0.966	1
Amp_3q26.33	Amp_11q13.3	0.966	1
Amp_5p15.33	Del_5q15	0.966	1
Amp_5p12	Del_3p24.1	0.966	1
Amp_8p11.23	Amp_11q13.3	0.966	1
Amp_12p13.33	Del_9q21.11	0.966	1
ASXL1	Amp_3q26.33	0.967	1
BRAF	KDM6A	0.967	1
FGFR3	Del_10q23.31	0.967	1
GAGE2A	Amp_9p23	0.967	1
GAGE2A	Del_18q23	0.967	1
HLA-A	NAP1L2	0.967	1
HLA-A	TIGD4	0.967	1
HUWE1	NOTCH1	0.967	1
KDM6A	NUDT11	0.967	1
KEAP1	NAP1L2	0.967	1
KEAP1	RASA1	0.967	1
KEAP1	ZNF233	0.967	1
KRT17	Del_5q12.1	0.967	1
KRT17	Del_5q15	0.967	1
KRTAP5-5	Amp_9p23	0.967	1
MEFV	Del_8p23.2	0.967	1
MLL4	VEZF1	0.967	1
NFE2L2	TGFBR2	0.967	1
NSD1	PTPN14	0.967	1
RASA1	9q-Amp	0.967	1
RB1	9q-Amp	0.967	1
RB1	Del_5q35.3	0.967	1
TIGD4	9q-Amp	0.967	1
TIGD4	4p-Del	0.967	1
ZNF233	4p-Del	0.967	1
14q-Amp	Amp_Xq28	0.967	1
3q-Amp	Del_21q22.3	0.967	1
9q-Amp	Del_3p12.1	0.967	1
18q-Del	Del_Xp21.3	0.967	1
Amp_2q31.2	Del_4p16.3	0.967	1
Amp_5p15.33	Del_9q21.11	0.967	1
Amp_8q11.21	Amp_13q34	0.967	1
Amp_11q13.3	Del_Xp21.3	0.967	1
Amp_12p13.33	Del_13q14.2	0.967	1
Amp_Xq28	Del_14q32.32	0.967	1
Del_16q23.3	Del_17q25.3	0.967	1
ADAM19	JUB	0.968	1
JUB	KIAA1267	0.968	1
KRTAP5-5	20q-Amp	0.968	1
MAPK1	Amp_9p24.1	0.968	1
MLL4	Amp_8q24.21	0.968	1
PTEN	3q-Amp	0.968	1
THSD7A	Del_16q23.3	0.968	1
12p-Amp	Del_3p12.1	0.968	1
8q-Amp	Amp_7p11.2	0.968	1
10p-Del	Del_16q23.3	0.968	1
9p-Del	Amp_7q21.3	0.968	1
Amp_2q31.2	Amp_6p12.1	0.968	1
Amp_18q11.2	Del_19p13.3	0.968	1
Del_3p12.1	Del_14q32.32	0.968	1
Del_11q23.1	Del_21q22.3	0.968	1
EPHA2	PTPN14	0.969	1
FBXW7	Amp_8p11.23	0.969	1
GAGE2A	KRTAP5-5	0.969	1
HUWE1	ZNF750	0.969	1
IRS4	Amp_9p23	0.969	1
MEFV	8q-Amp	0.969	1
PTEN	Del_4q22.1	0.969	1
PTEN	Del_10p15.3	0.969	1
TIGD4	ZNF750	0.969	1
ZNF233	ZNF750	0.969	1
12p-Amp	8q-Amp	0.969	1
1q-Amp	Amp_8p11.23	0.969	1
1q-Amp	Del_16q23.3	0.969	1
5p-Amp	Del_7q36.1	0.969	1
7p-Amp	Amp_8p11.23	0.969	1
8q-Amp	Amp_18q11.2	0.969	1
10p-Del	Amp_13q34	0.969	1
10p-Del	Del_7q31.1	0.969	1
3q-Del	Amp_18p11.31	0.969	1
9q-Del	Del_2q22.1	0.969	1
Amp_5p12	Del_14q11.2	0.969	1
Amp_6p12.1	Amp_8p11.23	0.969	1
Amp_6p12.1	Amp_8q11.21	0.969	1
Amp_6p12.1	Del_2q36.2	0.969	1
Amp_7q21.3	Amp_13q22.1	0.969	1
Amp_12p13.33	Del_21q22.3	0.969	1
Amp_15q26.3	Del_2q22.1	0.969	1
ASXL1	BRAF	0.97	1
ASXL1	MAPK1	0.97	1
BRAF	IRS4	0.97	1
CASP8	EMG1	0.97	1
CASP8	Del_1q44	0.97	1
CUL3	Amp_7p11.2	0.97	1
DYSF	NLRP8	0.97	1
EP300	GAGE2A	0.97	1
GAGE2A	Del_10q23.31	0.97	1
IRS4	MAPK1	0.97	1
IRS4	NUDT11	0.97	1
JUB	5q-Del	0.97	1
MAPK1	PTPN14	0.97	1
MAPK1	1q-Amp	0.97	1
NLRP8	VEZF1	0.97	1
NLRP8	Amp_6q12	0.97	1
NUDT11	1q-Amp	0.97	1
PIK3R1	9q-Del	0.97	1
VEZF1	7q-Amp	0.97	1
VEZF1	Xp-Del	0.97	1
VEZF1	Del_3p12.1	0.97	1
ZNF623	Del_Xq21.33	0.97	1
5p-Amp	Del_10p11.21	0.97	1
15q-Del	Amp_17q12	0.97	1
18q-Del	Amp_11q13.3	0.97	1
8p-Del	Amp_18p11.31	0.97	1
9q-Del	Amp_13q34	0.97	1
9q-Del	Del_7q31.1	0.97	1
Xp-Del	Amp_6q12	0.97	1
Amp_2q11.2	Amp_15q26.3	0.97	1
Amp_2q11.2	Del_2q21.2	0.97	1
Amp_2q31.2	Del_5q15	0.97	1
Amp_5p12	Amp_6q12	0.97	1
Amp_11q13.3	Del_4p16.3	0.97	1
Amp_13q34	Amp_15q26.3	0.97	1
Amp_13q34	Del_2q21.2	0.97	1
Amp_18p11.31	Del_Xp22.2	0.97	1
Del_2q21.2	Del_7q31.1	0.97	1
Del_8p23.2	Del_Xq21.33	0.97	1
ADAM19	13q-Del	0.971	1
CREBBP	KIAA1267	0.971	1
EMG1	Amp_12p13.33	0.971	1
FBXW7	KIAA1267	0.971	1
GAGE2A	20p-Amp	0.971	1
GAGE2A	Amp_18q11.2	0.971	1
HLA-B	KRT17	0.971	1
KDM6A	ZNF750	0.971	1
KDM6A	Del_3p26.2	0.971	1
KRTAP5-5	20p-Amp	0.971	1
MLL4	Del_5q15	0.971	1
NSD1	Amp_3q26.33	0.971	1
NUDT11	Del_13q12.11	0.971	1
PIK3R1	Del_4q22.1	0.971	1
PTEN	Del_4q35.2	0.971	1
RASA1	ZNF750	0.971	1
RB1	5q-Del	0.971	1
THSD7A	Del_14q11.2	0.971	1
VEZF1	Del_4q22.1	0.971	1
12p-Amp	13q-Del	0.971	1
12p-Amp	Del_3p24.1	0.971	1
14q-Amp	Amp_13q22.1	0.971	1
20p-Amp	Amp_12q15	0.971	1
20q-Amp	10p-Del	0.971	1
4p-Del	Amp_2q31.2	0.971	1
4q-Del	Amp_17q12	0.971	1
5q-Del	Amp_11q13.3	0.971	1
5q-Del	Del_6p25.3	0.971	1
8p-Del	Amp_8p11.23	0.971	1
Xp-Del	Amp_2q31.2	0.971	1
Amp_2q11.2	Del_3p26.2	0.971	1
Amp_2q31.2	Amp_15q26.3	0.971	1
Amp_2q31.2	Del_2q21.2	0.971	1
Amp_8q24.21	Amp_9p23	0.971	1
Amp_12p13.33	Amp_15q26.3	0.971	1
Amp_13q34	Del_3p26.2	0.971	1
Amp_18q11.2	Del_9q21.11	0.971	1
Amp_Xq28	Del_2q36.2	0.971	1
Del_5q12.1	Del_17q25.3	0.971	1
Del_10p11.21	Del_Xp21.3	0.971	1
Del_13q12.11	Del_Xp21.3	0.971	1
ASXL1	20q-Amp	0.972	1
C3orf59	RAC1	0.972	1
CASP8	NAP1L2	0.972	1
FGFR3	RAC1	0.972	1
HLA-A	OR6C65	0.972	1
IRS4	MLL2	0.972	1
IRS4	20q-Amp	0.972	1
JUB	Amp_6p12.1	0.972	1
JUB	Del_5q35.3	0.972	1
KEAP1	PTPN14	0.972	1
KIAA1267	NOTCH1	0.972	1
MAPK1	Amp_9p23	0.972	1
NAP1L2	Amp_2q11.2	0.972	1
NAP1L2	Amp_13q34	0.972	1
NAP1L2	Del_2q22.1	0.972	1
NAP1L2	Del_7q31.1	0.972	1
NFE2L2	Del_Xp22.2	0.972	1
NUDT11	Del_16q23.3	0.972	1
RASA1	Amp_5p15.33	0.972	1
TIGD4	Del_7q31.1	0.972	1
TIGD4	Del_11q23.1	0.972	1
ZNF233	Amp_2q11.2	0.972	1
ZNF750	11q-Del	0.972	1
12p-Amp	3q-Amp	0.972	1
1q-Amp	9q-Amp	0.972	1
20p-Amp	Del_13q12.11	0.972	1
3q-Amp	8q-Amp	0.972	1
3q-Amp	Del_4p15.2	0.972	1
7p-Amp	Del_8p23.2	0.972	1
9q-Amp	Del_14q32.32	0.972	1
15q-Del	Del_2q22.1	0.972	1
18q-Del	Del_1q44	0.972	1
18q-Del	Del_10q23.31	0.972	1
21q-Del	Amp_2q11.2	0.972	1
21q-Del	Amp_6q12	0.972	1
21q-Del	Amp_13q34	0.972	1
3p-Del	Del_2q21.2	0.972	1
9p-Del	Del_16q23.1	0.972	1
Amp_2q11.2	Del_10p15.3	0.972	1
Amp_6p12.1	Amp_Xq28	0.972	1
Amp_6p12.1	Del_8p23.2	0.972	1
Amp_6p12.1	Del_Xp22.2	0.972	1
Amp_7p11.2	Del_7q31.1	0.972	1
Amp_9p24.1	Del_10p15.3	0.972	1
Amp_12q15	Del_10p11.21	0.972	1
Del_7q31.1	Del_10p15.3	0.972	1
Del_8p23.2	Del_17q25.3	0.972	1
ADAM19	THSD7A	0.973	1
EMG1	Amp_8q24.21	0.973	1
EPHA2	KRT17	0.973	1
FGFR3	Del_11q23.1	0.973	1
JUB	Amp_11q13.3	0.973	1
JUB	Del_4p16.3	0.973	1
KDM6A	MEFV	0.973	1
KIAA1267	Del_4q21.3	0.973	1
MEFV	8p-Del	0.973	1
PIK3R1	RASA1	0.973	1
TIGD4	Amp_12p13.33	0.973	1
12p-Amp	Amp_5p15.33	0.973	1
12p-Amp	Del_11q23.1	0.973	1
12p-Amp	Del_19p13.3	0.973	1
1q-Amp	Amp_11q13.3	0.973	1
3q-Amp	Xp-Del	0.973	1
7q-Amp	Del_Xp22.2	0.973	1
11p-Del	3q-Del	0.973	1
8p-Del	Amp_2q31.2	0.973	1
8p-Del	Amp_11q13.3	0.973	1
8p-Del	Del_13q14.2	0.973	1
Amp_5p15.33	Del_4q21.3	0.973	1
Amp_5p15.33	Del_16q23.3	0.973	1
Amp_5p12	Amp_12p13.33	0.973	1
Amp_6p12.1	Del_Xq21.33	0.973	1
Amp_8q11.21	Amp_Xq28	0.973	1
Amp_15q26.3	Amp_Xq28	0.973	1
Del_4q35.2	Del_Xp22.2	0.973	1
Del_13q14.2	Del_21q22.3	0.973	1
EP300	IRS4	0.974	1
EP300	PTPN14	0.974	1
FBXW7	5q-Del	0.974	1
GAGE2A	Amp_2q31.2	0.974	1
JUB	Del_4q22.1	0.974	1
MLL2	Amp_2q11.2	0.974	1
MLL4	THSD7A	0.974	1
MLL4	Del_1p36.21	0.974	1
MLL4	Del_2q21.2	0.974	1
MLL4	Del_4q21.3	0.974	1
SMAD4	Del_18q23	0.974	1
12p-Amp	Del_4q21.3	0.974	1
14q-Amp	Del_4q21.3	0.974	1
1q-Amp	Del_11p15.5	0.974	1
20p-Amp	Amp_13q22.1	0.974	1
3q-Amp	Del_10q23.31	0.974	1
5p-Amp	Amp_7q21.3	0.974	1
8p-Amp	Amp_12p13.33	0.974	1
10p-Del	Del_11p15.5	0.974	1
15q-Del	Del_18q23	0.974	1
3q-Del	Del_19p13.3	0.974	1
4q-Del	Amp_12p13.33	0.974	1
Amp_Xq28	Del_10p15.3	0.974	1
Del_2q22.1	Del_10p11.21	0.974	1
ADAM19	15q-Del	0.975	1
C3orf59	Del_Xq21.33	0.975	1
CUL3	ZNF750	0.975	1
DYSF	RB1	0.975	1
DYSF	8p-Del	0.975	1
EPHA2	Del_2q22.1	0.975	1
FBXW7	Amp_6p12.1	0.975	1
JUB	4p-Del	0.975	1
JUB	Del_4p15.2	0.975	1
KDM6A	Del_13q12.11	0.975	1
KEAP1	TP53	0.975	1
KIAA1267	Amp_17q12	0.975	1
MEFV	MLL2	0.975	1
MEFV	11q-Del	0.975	1
MLL2	VEZF1	0.975	1
MLL4	TIGD4	0.975	1
MLL4	ZNF233	0.975	1
NUDT11	3q-Amp	0.975	1
NUDT11	Amp_8q24.21	0.975	1
RASA1	Amp_2q11.2	0.975	1
RB1	Del_13q12.11	0.975	1
RHOA	Del_Xq21.33	0.975	1
ZNF623	15q-Del	0.975	1
20q-Amp	21q-Del	0.975	1
7p-Amp	Del_2q36.2	0.975	1
8p-Amp	Amp_6q12	0.975	1
13q-Del	Amp_18p11.31	0.975	1
13q-Del	Del_1p13.2	0.975	1
18q-Del	Amp_17q12	0.975	1
Xp-Del	Del_8p23.2	0.975	1
Amp_7p11.2	Amp_13q22.1	0.975	1
Amp_8p11.23	Del_5q35.3	0.975	1
Amp_Xq28	Del_5q12.1	0.975	1
Del_5q15	Del_Xp22.2	0.975	1
Del_11q23.1	Del_17q25.3	0.975	1
ASXL1	PIK3R1	0.976	1
CASP8	RB1	0.976	1
EMG1	GAGE2A	0.976	1
EMG1	KRTAP5-5	0.976	1
GAGE2A	Del_1q44	0.976	1
GAGE2A	Del_Xp22.2	0.976	1
HLA-B	PTEN	0.976	1
IRS4	20p-Amp	0.976	1
JUB	Amp_11p13	0.976	1
KEAP1	KRT17	0.976	1
KRTAP5-5	Del_1q44	0.976	1
NAP1L2	Del_10p11.21	0.976	1
NLRP8	Amp_13q22.1	0.976	1
NSD1	Del_7q31.1	0.976	1
NUDT11	Del_11p15.5	0.976	1
OR6C65	PIK3R1	0.976	1
OR6C65	Amp_18q11.2	0.976	1
PTEN	Del_17q25.3	0.976	1
VEZF1	1q-Amp	0.976	1
12p-Amp	Amp_17q12	0.976	1
14q-Amp	Del_4p16.3	0.976	1
1q-Amp	5q-Del	0.976	1
3q-Amp	Amp_8p11.23	0.976	1
3q-Amp	Del_3p26.2	0.976	1
5p-Amp	Del_6p25.3	0.976	1
7p-Amp	Xp-Del	0.976	1
8p-Amp	Amp_9p23	0.976	1
8p-Amp	Del_3p12.1	0.976	1
8p-Amp	Del_16q23.3	0.976	1
13q-Del	9q-Del	0.976	1
15q-Del	Del_14q32.32	0.976	1
3p-Del	Amp_8q24.21	0.976	1
9p-Del	Del_2q22.1	0.976	1
9q-Del	Amp_13q22.1	0.976	1
Amp_5p12	Amp_8q11.21	0.976	1
Amp_7q21.3	Del_3p26.2	0.976	1
Amp_7q21.3	Del_10p15.3	0.976	1
Amp_11p13	Amp_Xq28	0.976	1
Amp_11q13.3	Del_4p15.2	0.976	1
Amp_13q22.1	Amp_15q26.3	0.976	1
Del_1q44	Del_2q36.2	0.976	1
BRAF	RAC1	0.977	1
CDKN2A	KRT17	0.977	1
EMG1	Del_4q22.1	0.977	1
GAGE2A	7p-Amp	0.977	1
KDM6A	TP53	0.977	1
KDM6A	Del_9p21.3	0.977	1
MAPK1	PTEN	0.977	1
MLL2	7p-Amp	0.977	1
NAP1L2	9q-Del	0.977	1
NAP1L2	Amp_15q26.3	0.977	1
NAP1L2	Del_2q21.2	0.977	1
NFE2L2	3q-Amp	0.977	1
NLRP8	Amp_7q21.3	0.977	1
NSD1	Amp_5p12	0.977	1
NUDT11	3q-Del	0.977	1
RASA1	TP53	0.977	1
THSD7A	Del_3p26.2	0.977	1
TIGD4	Xp-Del	0.977	1
ZNF233	7q-Amp	0.977	1
ZNF233	Xp-Del	0.977	1
ZNF233	Amp_7q21.3	0.977	1
ZNF623	8p-Amp	0.977	1
20p-Amp	Amp_3q26.33	0.977	1
20p-Amp	Del_1p36.21	0.977	1
20q-Amp	Del_5q15	0.977	1
11p-Del	Amp_2q31.2	0.977	1
11q-Del	Amp_2q11.2	0.977	1
Amp_2q11.2	Amp_5p15.33	0.977	1
Amp_2q11.2	Del_7q36.1	0.977	1
Amp_2q31.2	Del_6p25.3	0.977	1
Amp_5p15.33	Amp_13q34	0.977	1
Amp_5p15.33	Del_Xq21.33	0.977	1
Amp_6p12.1	Del_5q35.3	0.977	1
Amp_7q21.3	Amp_15q26.3	0.977	1
Amp_8q11.21	Del_3p26.2	0.977	1
Amp_11p13	Amp_20q11.22	0.977	1
Amp_13q22.1	Del_5q35.3	0.977	1
Amp_13q34	Del_11q23.1	0.977	1
Amp_13q34	Del_19p13.3	0.977	1
Amp_18p11.31	Del_11p15.5	0.977	1
Del_3p12.1	Del_17q25.3	0.977	1
Del_7q31.1	Del_11q23.1	0.977	1
Del_10p11.21	Del_17q25.3	0.977	1
Del_11p15.5	Del_16q23.3	0.977	1
Del_13q14.2	Del_19p13.3	0.977	1
BRAF	Amp_18q11.2	0.978	1
C3orf59	CREBBP	0.978	1
EMG1	Del_21q22.3	0.978	1
FBXW7	FGFR3	0.978	1
FBXW7	PIK3CA	0.978	1
FBXW7	3p-Del	0.978	1
HLA-B	TGFBR2	0.978	1
HUWE1	Del_1q44	0.978	1
JUB	KDM6A	0.978	1
KDM6A	MLL4	0.978	1
NSD1	Del_13q14.2	0.978	1
NUDT11	Del_4q35.2	0.978	1
RASA1	Del_Xp22.2	0.978	1
THSD7A	Xp-Del	0.978	1
THSD7A	Del_2q21.2	0.978	1
TP53	Amp_18q11.2	0.978	1
TP53	Del_4p15.2	0.978	1
12p-Amp	Del_5q12.1	0.978	1
14q-Amp	Del_4p15.2	0.978	1
14q-Amp	Del_18q23	0.978	1
3q-Amp	Del_4q21.3	0.978	1
7q-Amp	Amp_15q26.3	0.978	1
10p-Del	Del_2q21.2	0.978	1
21q-Del	Amp_7q21.3	0.978	1
4p-Del	Del_2q22.1	0.978	1
9q-Del	Xp-Del	0.978	1
9q-Del	Amp_11q13.3	0.978	1
9q-Del	Del_1p36.21	0.978	1
9q-Del	Del_2q21.2	0.978	1
Xp-Del	Amp_11q13.3	0.978	1
Amp_6q12	Amp_8p11.23	0.978	1
Amp_13q22.1	Del_4q22.1	0.978	1
Amp_15q26.3	Del_4q21.3	0.978	1
Amp_15q26.3	Del_5q12.1	0.978	1
Del_7q31.1	Del_14q11.2	0.978	1
C3orf59	SMAD4	0.979	1
CUL3	Amp_2q11.2	0.979	1
CUL3	Amp_6q12	0.979	1
DYSF	PTPN14	0.979	1
FAT1	TGFBR2	0.979	1
GAGE2A	Del_9p21.3	0.979	1
IRS4	Del_7q31.1	0.979	1
KDM6A	18q-Del	0.979	1
RHOA	15q-Del	0.979	1
THSD7A	Del_3p14.2	0.979	1
20p-Amp	3q-Amp	0.979	1
5p-Amp	8p-Amp	0.979	1
7p-Amp	Del_4p15.2	0.979	1
8q-Amp	Del_3p12.1	0.979	1
9q-Amp	Amp_18p11.31	0.979	1
11p-Del	Del_1p13.2	0.979	1
11q-Del	Amp_Xq28	0.979	1
3p-Del	Amp_18q11.2	0.979	1
4p-Del	Amp_6p12.1	0.979	1
4q-Del	Del_10p11.21	0.979	1
8p-Del	Amp_7q21.3	0.979	1
9p-Del	Amp_8q24.21	0.979	1
Amp_6q12	Amp_20q11.22	0.979	1
Amp_7q21.3	Del_17q25.3	0.979	1
Amp_11p13	Amp_13q22.1	0.979	1
Amp_11p13	Del_21q22.3	0.979	1
Amp_12q15	Del_1p13.2	0.979	1
Amp_13q22.1	Del_4p15.2	0.979	1
Amp_13q22.1	Del_5q15	0.979	1
Amp_13q34	Amp_20q11.22	0.979	1
Amp_15q26.3	Del_3p12.1	0.979	1
Del_1p36.21	Del_8p23.2	0.979	1
Del_1p13.2	Del_11q23.1	0.979	1
Del_1q44	Del_7q36.1	0.979	1
Del_4q21.3	Del_8p23.2	0.979	1
Del_7q36.1	Del_Xp22.2	0.979	1
Del_8p23.2	Del_Xp21.3	0.979	1
Del_9p21.3	Del_10q23.31	0.979	1
Del_10p15.3	Del_16q23.3	0.979	1
ADAM19	CASP8	0.98	1
BRAF	Amp_8q11.21	0.98	1
C3orf59	PIK3CA	0.98	1
CREBBP	Amp_2q31.2	0.98	1
FGFR3	10p-Del	0.98	1
GAGE2A	3p-Del	0.98	1
JUB	Del_Xp22.2	0.98	1
KDM6A	TIGD4	0.98	1
KRTAP5-5	21q-Del	0.98	1
OR6C65	Amp_5p15.33	0.98	1
RASA1	7p-Amp	0.98	1
RB1	13q-Del	0.98	1
RB1	3p-Del	0.98	1
RHOA	THSD7A	0.98	1
ZNF233	Del_2q36.2	0.98	1
ZNF623	Del_2q22.1	0.98	1
12p-Amp	Amp_8q24.21	0.98	1
14q-Amp	4q-Del	0.98	1
14q-Amp	Amp_13q34	0.98	1
1q-Amp	Amp_5p15.33	0.98	1
5p-Amp	3q-Del	0.98	1
7p-Amp	8p-Del	0.98	1
8q-Amp	Xp-Del	0.98	1
11p-Del	Amp_Xq28	0.98	1
11q-Del	Del_5q15	0.98	1
9p-Del	Amp_12p13.33	0.98	1
9p-Del	Del_16q23.3	0.98	1
Xp-Del	Amp_8q24.21	0.98	1
Amp_5p15.33	Amp_6p12.1	0.98	1
Amp_8p11.23	Amp_12q15	0.98	1
Amp_9p23	Del_9p21.3	0.98	1
Amp_13q22.1	Del_21q22.3	0.98	1
Amp_18p11.31	Del_Xp21.3	0.98	1
Del_7q31.1	Del_14q32.32	0.98	1
CDKN2A	Amp_6p12.1	0.981	1
FAT1	NFE2L2	0.981	1
GAGE2A	4q-Del	0.981	1
KRTAP5-5	8p-Amp	0.981	1
NSD1	4q-Del	0.981	1
PTEN	9q-Amp	0.981	1
RASA1	7q-Amp	0.981	1
RB1	Del_2q21.2	0.981	1
SMAD4	Del_1p13.2	0.981	1
THSD7A	Del_10p15.3	0.981	1
TP53	Del_4q35.2	0.981	1
ZNF623	Del_14q32.32	0.981	1
7q-Amp	Del_3p24.1	0.981	1
11p-Del	Del_10p15.3	0.981	1
18q-Del	Del_14q11.2	0.981	1
21q-Del	9q-Del	0.981	1
21q-Del	Amp_6p12.1	0.981	1
21q-Del	Amp_18q11.2	0.981	1
Xp-Del	Del_3p24.1	0.981	1
Amp_15q26.3	Del_2q36.2	0.981	1
Del_1p13.2	Del_10p15.3	0.981	1
Del_4q21.3	Del_10p15.3	0.981	1
Del_4q22.1	Del_Xp21.3	0.981	1
Del_9q21.11	Del_10p15.3	0.981	1
ADAM19	C3orf59	0.982	1
ADAM19	FGFR3	0.982	1
ASXL1	ZNF233	0.982	1
C3orf59	KIAA1267	0.982	1
CASP8	JUB	0.982	1
CUL3	JUB	0.982	1
CUL3	ZNF233	0.982	1
CUL3	Amp_Xq28	0.982	1
EMG1	Del_1q44	0.982	1
FBXW7	11p-Del	0.982	1
FBXW7	Del_6p25.3	0.982	1
FBXW7	Del_7q36.1	0.982	1
GAGE2A	Del_14q11.2	0.982	1
IRS4	ZNF233	0.982	1
JUB	PTPN14	0.982	1
KIAA1267	RHOA	0.982	1
KRT17	MLL4	0.982	1
MLL4	Del_7q36.1	0.982	1
NAP1L2	8q-Amp	0.982	1
PIK3R1	PTEN	0.982	1
RASA1	Amp_7q21.3	0.982	1
RB1	10p-Del	0.982	1
RB1	Amp_3q26.33	0.982	1
RB1	Del_1p36.21	0.982	1
RB1	Del_4q21.3	0.982	1
RB1	Del_13q14.2	0.982	1
THSD7A	Del_13q14.2	0.982	1
TIGD4	Del_21q22.3	0.982	1
VEZF1	3q-Del	0.982	1
12p-Amp	Del_3p26.2	0.982	1
14q-Amp	Amp_12p13.33	0.982	1
3q-Amp	21q-Del	0.982	1
4q-Del	Amp_8p11.23	0.982	1
9p-Del	Del_2q21.2	0.982	1
Amp_2q11.2	Del_8p23.2	0.982	1
Amp_3q26.33	Amp_8q24.21	0.982	1
Amp_6p12.1	Del_4p15.2	0.982	1
Amp_6p12.1	Del_5q15	0.982	1
Amp_6q12	Del_8p23.2	0.982	1
Amp_8q11.21	Amp_9p23	0.982	1
Amp_13q22.1	Del_9q21.11	0.982	1
Amp_13q22.1	Del_19p13.3	0.982	1
Amp_13q34	Del_3p14.2	0.982	1
Amp_17q12	Del_3p14.2	0.982	1
Amp_17q12	Del_9q21.11	0.982	1
Amp_20q11.22	Del_11q23.1	0.982	1
Del_1q44	Del_3p14.2	0.982	1
Del_4q35.2	Del_Xp21.3	0.982	1
ADAM19	NFE2L2	0.983	1
ADAM19	Amp_6p12.1	0.983	1
CASP8	KRT17	0.983	1
CUL3	Amp_12p13.33	0.983	1
EMG1	20q-Amp	0.983	1
JUB	13q-Del	0.983	1
MAPK1	Amp_17q12	0.983	1
NOTCH1	RASA1	0.983	1
OR6C65	Amp_12p13.33	0.983	1
PIK3R1	Del_11p15.5	0.983	1
TIGD4	11q-Del	0.983	1
TIGD4	Del_19p13.3	0.983	1
TP53	7q-Amp	0.983	1
TP53	9q-Del	0.983	1
TP53	Del_2q21.2	0.983	1
VEZF1	Del_10q23.31	0.983	1
ZNF623	Amp_6p12.1	0.983	1
ZNF750	3q-Amp	0.983	1
12p-Amp	Del_14q11.2	0.983	1
1q-Amp	Amp_9p13.3	0.983	1
20p-Amp	9q-Amp	0.983	1
20p-Amp	Del_4p16.3	0.983	1
20p-Amp	Del_4q35.2	0.983	1
7p-Amp	Del_Xp22.2	0.983	1
8q-Amp	Del_3p24.1	0.983	1
11p-Del	Del_21q22.3	0.983	1
3p-Del	Amp_7q21.3	0.983	1
Amp_2q11.2	Amp_8q24.21	0.983	1
Amp_2q31.2	Del_1p36.21	0.983	1
Amp_2q31.2	Del_3p12.1	0.983	1
Amp_2q31.2	Del_4q21.3	0.983	1
Amp_3q26.33	Del_Xp22.2	0.983	1
Amp_5p15.33	Amp_8q11.21	0.983	1
Amp_8q11.21	Del_11q23.1	0.983	1
Amp_8q24.21	Del_9q21.11	0.983	1
Amp_11q13.3	Del_5q35.3	0.983	1
Amp_13q22.1	Del_9p21.3	0.983	1
Amp_15q26.3	Del_4q22.1	0.983	1
Del_1q44	Del_3p12.1	0.983	1
Del_5q12.1	Del_Xp21.3	0.983	1
Del_5q15	Del_Xp21.3	0.983	1
Del_6p25.3	Del_21q22.3	0.983	1
Del_9p21.3	Del_19p13.3	0.983	1
Del_10q23.31	Del_11p15.5	0.983	1
CREBBP	CUL3	0.984	1
CREBBP	OR6C65	0.984	1
CUL3	9q-Del	0.984	1
CUL3	Amp_15q26.3	0.984	1
EP300	RAC1	0.984	1
HLA-A	TGFBR2	0.984	1
HUWE1	Del_2q21.2	0.984	1
IRS4	Xp-Del	0.984	1
JUB	Amp_12p13.33	0.984	1
KDM6A	Del_3p14.2	0.984	1
KDM6A	Del_18q23	0.984	1
NAP1L2	Del_3p14.2	0.984	1
NUDT11	7p-Amp	0.984	1
NUDT11	Amp_5p15.33	0.984	1
OR6C65	9q-Del	0.984	1
PIK3R1	Del_Xq21.33	0.984	1
PTPN14	13q-Del	0.984	1
TIGD4	Del_3p14.2	0.984	1
1q-Amp	7p-Amp	0.984	1
1q-Amp	9q-Del	0.984	1
20p-Amp	8p-Amp	0.984	1
20p-Amp	Del_4p15.2	0.984	1
20p-Amp	Del_5q15	0.984	1
5p-Amp	Amp_12p13.33	0.984	1
5p-Amp	Del_4q22.1	0.984	1
7q-Amp	Del_21q22.3	0.984	1
8q-Amp	Amp_12p13.33	0.984	1
8q-Amp	Amp_Xq28	0.984	1
8q-Amp	Del_3p14.2	0.984	1
8q-Amp	Del_Xp22.2	0.984	1
9q-Amp	Amp_5p12	0.984	1
10p-Del	Del_6p25.3	0.984	1
10p-Del	Del_9q21.11	0.984	1
15q-Del	8p-Del	0.984	1
21q-Del	Amp_11p13	0.984	1
3q-Del	Del_10q23.31	0.984	1
8p-Del	Amp_3q26.33	0.984	1
Xp-Del	Del_21q22.3	0.984	1
Amp_5p15.33	Del_10p11.21	0.984	1
Amp_8q11.21	Amp_11q13.3	0.984	1
Amp_8q11.21	Del_5q12.1	0.984	1
Amp_12q15	Del_Xp21.3	0.984	1
Amp_18p11.31	Del_2q36.2	0.984	1
Amp_18q11.2	Del_4p15.2	0.984	1
Del_1p36.21	Del_9q21.11	0.984	1
Del_1q44	Del_3p24.1	0.984	1
Del_4q22.1	Del_17q25.3	0.984	1
Del_4q35.2	Del_16q23.1	0.984	1
Del_10q23.31	Del_14q11.2	0.984	1
Del_16q23.1	Del_Xp22.2	0.984	1
CASP8	CREBBP	0.985	1
CDKN2A	7p-Amp	0.985	1
DYSF	3q-Del	0.985	1
DYSF	Del_16q23.3	0.985	1
EMG1	5q-Del	0.985	1
EP300	ZNF750	0.985	1
FGFR3	RHOA	0.985	1
JUB	TP53	0.985	1
JUB	Del_4q21.3	0.985	1
JUB	Del_Xp21.3	0.985	1
MAPK1	THSD7A	0.985	1
MEFV	3q-Amp	0.985	1
MLL2	Amp_3q26.33	0.985	1
NAP1L2	Del_9p21.3	0.985	1
NSD1	NUDT11	0.985	1
NUDT11	Amp_3q26.33	0.985	1
RB1	Del_2q36.2	0.985	1
RHOA	8q-Amp	0.985	1
THSD7A	Del_3p24.1	0.985	1
THSD7A	Del_Xp22.2	0.985	1
TP53	Amp_12p13.33	0.985	1
TP53	Amp_18p11.31	0.985	1
1q-Amp	3q-Amp	0.985	1
20q-Amp	Del_14q32.32	0.985	1
5p-Amp	9p-Del	0.985	1
5p-Amp	Del_2q21.2	0.985	1
8p-Amp	Del_1p13.2	0.985	1
10p-Del	Amp_Xq28	0.985	1
11p-Del	Del_19p13.3	0.985	1
11q-Del	Del_9q21.11	0.985	1
11q-Del	Del_Xp21.3	0.985	1
15q-Del	Amp_18p11.31	0.985	1
15q-Del	Del_11q23.1	0.985	1
3q-Del	Del_7q31.1	0.985	1
9q-Del	Del_14q11.2	0.985	1
9q-Del	Del_19p13.3	0.985	1
Amp_3q26.33	Del_6p25.3	0.985	1
Amp_5p12	Del_3p26.2	0.985	1
Amp_6q12	Amp_11p13	0.985	1
Amp_7q21.3	Del_10p11.21	0.985	1
Amp_8p11.23	Del_3p12.1	0.985	1
Amp_11q13.3	Del_3p12.1	0.985	1
Amp_15q26.3	Del_14q11.2	0.985	1
Amp_17q12	Del_7q36.1	0.985	1
Amp_17q12	Del_19p13.3	0.985	1
Amp_18q11.2	Del_1q44	0.985	1
Del_1p36.21	Del_19p13.3	0.985	1
Del_1p13.2	Del_13q14.2	0.985	1
Del_6p25.3	Del_7q36.1	0.985	1
Del_10p15.3	Del_11p15.5	0.985	1
Del_13q12.11	Del_Xp22.2	0.985	1
ADAM19	Del_6p25.3	0.986	1
ASXL1	THSD7A	0.986	1
ASXL1	3p-Del	0.986	1
BRAF	KIAA1267	0.986	1
C3orf59	CASP8	0.986	1
CUL3	10p-Del	0.986	1
EPHA2	HLA-A	0.986	1
EPHA2	JUB	0.986	1
FGFR3	Del_14q32.32	0.986	1
IRS4	THSD7A	0.986	1
KDM6A	8p-Amp	0.986	1
KIAA1267	MAPK1	0.986	1
MEFV	Del_4p16.3	0.986	1
MEFV	Del_13q14.2	0.986	1
MLL2	TIGD4	0.986	1
NLRP8	NSD1	0.986	1
NLRP8	14q-Amp	0.986	1
NUDT11	ZNF623	0.986	1
PIK3R1	Del_4q35.2	0.986	1
PTEN	Amp_18q11.2	0.986	1
PTEN	Del_5q35.3	0.986	1
PTPN14	RASA1	0.986	1
PTPN14	RB1	0.986	1
PTPN14	THSD7A	0.986	1
PTPN14	Amp_18p11.31	0.986	1
RAC1	TIGD4	0.986	1
RAC1	ZNF233	0.986	1
RASA1	Del_10p15.3	0.986	1
RB1	4q-Del	0.986	1
RB1	Del_3p12.1	0.986	1
RB1	Del_10p15.3	0.986	1
TGFBR2	ZNF750	0.986	1
TIGD4	Del_3p12.1	0.986	1
12p-Amp	7q-Amp	0.986	1
12p-Amp	Amp_15q26.3	0.986	1
14q-Amp	Xp-Del	0.986	1
8q-Amp	Del_16q23.1	0.986	1
9q-Amp	Del_11q23.1	0.986	1
15q-Del	Del_4q35.2	0.986	1
21q-Del	Del_6p25.3	0.986	1
Amp_5p12	Del_13q12.11	0.986	1
Amp_6p12.1	Amp_12p13.33	0.986	1
Amp_6p12.1	Del_14q11.2	0.986	1
Amp_7p11.2	Del_8p23.2	0.986	1
Amp_7q21.3	Del_5q35.3	0.986	1
Amp_12p13.33	Del_16q23.3	0.986	1
Amp_12q15	Del_8p23.2	0.986	1
Amp_13q34	Del_3p24.1	0.986	1
Amp_15q26.3	Del_14q32.32	0.986	1
Amp_17q12	Del_3p24.1	0.986	1
Amp_17q12	Del_13q14.2	0.986	1
Amp_20q11.22	Del_5q12.1	0.986	1
Del_1p13.2	Del_19p13.3	0.986	1
Del_2q36.2	Del_19p13.3	0.986	1
Del_5q12.1	Del_16q23.1	0.986	1
ADAM19	Del_2q36.2	0.987	1
ASXL1	KRT17	0.987	1
CUL3	Del_13q14.2	0.987	1
EMG1	JUB	0.987	1
EP300	HUWE1	0.987	1
FGFR3	NFE2L2	0.987	1
GAGE2A	11p-Del	0.987	1
GAGE2A	Amp_12q15	0.987	1
HLA-B	NOTCH1	0.987	1
JUB	Del_1q44	0.987	1
KEAP1	Del_9p21.3	0.987	1
KIAA1267	Del_2q36.2	0.987	1
KRT17	OR6C65	0.987	1
MEFV	Del_4p15.2	0.987	1
NAP1L2	Del_3p24.1	0.987	1
PIK3R1	Amp_17q12	0.987	1
TIGD4	Del_3p24.1	0.987	1
VEZF1	Amp_2q31.2	0.987	1
1q-Amp	Del_4q35.2	0.987	1
3q-Amp	4p-Del	0.987	1
5p-Amp	Amp_8q11.21	0.987	1
7p-Amp	Amp_12p13.33	0.987	1
7q-Amp	Amp_8p11.23	0.987	1
8q-Amp	Del_3p26.2	0.987	1
13q-Del	Del_18q23	0.987	1
15q-Del	Del_16q23.1	0.987	1
18q-Del	Amp_18p11.31	0.987	1
4q-Del	Amp_2q31.2	0.987	1
4q-Del	Amp_18p11.31	0.987	1
5q-Del	Amp_18q11.2	0.987	1
8p-Del	Del_10q23.31	0.987	1
Amp_2q11.2	Del_9q21.11	0.987	1
Amp_3q26.33	Amp_7q21.3	0.987	1
Amp_11q13.3	Del_13q12.11	0.987	1
Amp_12p13.33	Amp_13q22.1	0.987	1
Amp_12p13.33	Del_9p21.3	0.987	1
Amp_13q22.1	Del_4q21.3	0.987	1
Amp_13q34	Del_9p21.3	0.987	1
Amp_15q26.3	Del_3p26.2	0.987	1
Amp_Xq28	Del_1q44	0.987	1
Amp_Xq28	Del_10p11.21	0.987	1
Del_1q44	Del_3p26.2	0.987	1
Del_7q31.1	Del_9q21.11	0.987	1
ASXL1	NOTCH1	0.988	1
BRAF	C3orf59	0.988	1
BRAF	RHOA	0.988	1
CREBBP	EMG1	0.988	1
CREBBP	Del_1q44	0.988	1
DYSF	Amp_18p11.31	0.988	1
KDM6A	Amp_8q24.21	0.988	1
KDM6A	Del_14q11.2	0.988	1
KIAA1267	Del_4q22.1	0.988	1
KRT17	Del_1p13.2	0.988	1
MAPK1	RHOA	0.988	1
MLL2	Del_7q36.1	0.988	1
MLL4	Del_16q23.3	0.988	1
NAP1L2	20q-Amp	0.988	1
NUDT11	4q-Del	0.988	1
PIK3CA	20q-Amp	0.988	1
PTPN14	Del_9p21.3	0.988	1
THSD7A	Del_16q23.1	0.988	1
ZNF233	Amp_3q26.33	0.988	1
12p-Amp	Amp_6p12.1	0.988	1
12p-Amp	Del_13q12.11	0.988	1
14q-Amp	Amp_6p12.1	0.988	1
1q-Amp	Del_4p15.2	0.988	1
1q-Amp	Del_9p21.3	0.988	1
11q-Del	Del_10p15.3	0.988	1
21q-Del	Del_7q36.1	0.988	1
4p-Del	Amp_7q21.3	0.988	1
9p-Del	Del_Xp21.3	0.988	1
Xp-Del	Amp_6p12.1	0.988	1
Amp_2q11.2	Amp_18p11.31	0.988	1
Amp_5p15.33	Del_3p24.1	0.988	1
Amp_5p15.33	Del_5q35.3	0.988	1
Amp_5p12	Del_5q35.3	0.988	1
Amp_6p12.1	Del_2q21.2	0.988	1
Amp_13q22.1	Del_13q12.11	0.988	1
Amp_13q34	Amp_18p11.31	0.988	1
Amp_13q34	Del_10q23.31	0.988	1
Amp_13q34	Del_11p15.5	0.988	1
Amp_13q34	Del_Xq21.33	0.988	1
Amp_18p11.31	Del_4q35.2	0.988	1
Amp_18q11.2	Del_14q32.32	0.988	1
Del_2q36.2	Del_14q11.2	0.988	1
Del_5q35.3	Del_17q25.3	0.988	1
Del_7q31.1	Del_10q23.31	0.988	1
Del_7q31.1	Del_Xq21.33	0.988	1
Del_10q23.31	Del_19p13.3	0.988	1
Del_11p15.5	Del_19p13.3	0.988	1
Del_13q12.11	Del_14q32.32	0.988	1
ADAM19	MEFV	0.989	1
ADAM19	Del_19p13.3	0.989	1
ASXL1	PTPN14	0.989	1
EMG1	THSD7A	0.989	1
EMG1	21q-Del	0.989	1
EP300	NAP1L2	0.989	1
EPHA2	GAGE2A	0.989	1
EPHA2	HUWE1	0.989	1
EPHA2	ZNF623	0.989	1
FAT1	KEAP1	0.989	1
HRAS	PTPN14	0.989	1
HUWE1	KRT17	0.989	1
KIAA1267	MEFV	0.989	1
MEFV	ZNF623	0.989	1
MEFV	13q-Del	0.989	1
MEFV	Amp_8q11.21	0.989	1
MLL2	Del_2q22.1	0.989	1
NAP1L2	Del_10q23.31	0.989	1
NSD1	13q-Del	0.989	1
NUDT11	4p-Del	0.989	1
NUDT11	Del_14q11.2	0.989	1
OR6C65	8p-Amp	0.989	1
RASA1	14q-Amp	0.989	1
RASA1	5p-Amp	0.989	1
RASA1	Amp_5p12	0.989	1
VEZF1	ZNF623	0.989	1
VEZF1	13q-Del	0.989	1
ZNF750	Amp_17q12	0.989	1
1q-Amp	4q-Del	0.989	1
1q-Amp	Del_1p13.2	0.989	1
20q-Amp	3q-Amp	0.989	1
5p-Amp	Amp_6p12.1	0.989	1
15q-Del	Del_16q23.3	0.989	1
18q-Del	Del_10p15.3	0.989	1
21q-Del	Amp_13q22.1	0.989	1
3p-Del	Amp_5p15.33	0.989	1
3q-Del	9q-Del	0.989	1
3q-Del	Del_Xp22.2	0.989	1
5q-Del	Amp_2q11.2	0.989	1
9p-Del	Amp_17q12	0.989	1
Xp-Del	Del_11q23.1	0.989	1
Amp_2q11.2	Amp_9p13.3	0.989	1
Amp_2q11.2	Del_4p16.3	0.989	1
Amp_5p15.33	Amp_15q26.3	0.989	1
Amp_5p15.33	Amp_18p11.31	0.989	1
Amp_6p12.1	Del_11p15.5	0.989	1
Amp_6q12	Amp_18q11.2	0.989	1
Amp_7q21.3	Del_3p12.1	0.989	1
Amp_8q24.21	Del_5q12.1	0.989	1
Amp_8q24.21	Del_17q25.3	0.989	1
Amp_11q13.3	Del_Xp22.2	0.989	1
Amp_13q34	Amp_18q11.2	0.989	1
Amp_18p11.31	Del_5q12.1	0.989	1
Amp_18p11.31	Del_11q23.1	0.989	1
Amp_18p11.31	Del_21q22.3	0.989	1
Del_1p13.2	Del_10p11.21	0.989	1
Del_2q36.2	Del_10p11.21	0.989	1
Del_3p24.1	Del_Xp22.2	0.989	1
Del_4q35.2	Del_16q23.3	0.989	1
Del_10p15.3	Del_14q11.2	0.989	1
ADAM19	Amp_18p11.31	0.99	1
ASXL1	Del_14q11.2	0.99	1
BRAF	MAPK1	0.99	1
C3orf59	FAT1	0.99	1
CASP8	RAC1	0.99	1
CREBBP	HLA-A	0.99	1
CUL3	Del_10p15.3	0.99	1
CUL3	Del_18q23	0.99	1
FAT1	Del_1q44	0.99	1
GAGE2A	KEAP1	0.99	1
GAGE2A	9q-Amp	0.99	1
JUB	Del_9p21.3	0.99	1
KEAP1	KRTAP5-5	0.99	1
KEAP1	ZNF750	0.99	1
MEFV	THSD7A	0.99	1
NAP1L2	Del_3p26.2	0.99	1
NSD1	Del_7q36.1	0.99	1
NSD1	Del_11p15.5	0.99	1
VEZF1	Del_4q21.3	0.99	1
ZNF233	15q-Del	0.99	1
1q-Amp	Del_3p14.2	0.99	1
1q-Amp	Del_8p23.2	0.99	1
20q-Amp	Amp_8p11.23	0.99	1
5p-Amp	Amp_3q26.33	0.99	1
5p-Amp	Del_4q21.3	0.99	1
7q-Amp	Amp_9p23	0.99	1
8p-Amp	Del_17q25.3	0.99	1
8q-Amp	Del_13q12.11	0.99	1
10p-Del	18q-Del	0.99	1
18q-Del	Del_1p36.21	0.99	1
18q-Del	Del_4q21.3	0.99	1
3p-Del	Amp_5p12	0.99	1
3p-Del	Del_Xp22.2	0.99	1
5q-Del	Amp_3q26.33	0.99	1
8p-Del	Del_4q35.2	0.99	1
Amp_2q31.2	Del_4p15.2	0.99	1
Amp_6q12	Del_4p15.2	0.99	1
Amp_7p11.2	Amp_12p13.33	0.99	1
Amp_8q24.21	Del_Xp22.2	0.99	1
Amp_12p13.33	Del_11q23.1	0.99	1
Amp_17q12	Del_3p26.2	0.99	1
Del_2q21.2	Del_16q23.3	0.99	1
Del_2q22.1	Del_6p25.3	0.99	1
Del_2q36.2	Del_9p21.3	0.99	1
Del_7q36.1	Del_21q22.3	0.99	1
Del_9p21.3	Del_Xp22.2	0.99	1
Del_11q23.1	Del_Xp21.3	0.99	1
Del_18q23	Del_Xq21.33	0.99	1
Del_19p13.3	Del_21q22.3	0.99	1
ADAM19	HLA-A	0.991	1
ADAM19	TIGD4	0.991	1
ASXL1	HUWE1	0.991	1
BRAF	8q-Amp	0.991	1
C3orf59	HLA-B	0.991	1
C3orf59	MEFV	0.991	1
CUL3	14q-Amp	0.991	1
CUL3	Amp_3q26.33	0.991	1
FGFR3	VEZF1	0.991	1
GAGE2A	ZNF750	0.991	1
HLA-A	HUWE1	0.991	1
HLA-A	KIAA1267	0.991	1
HUWE1	PTPN14	0.991	1
HUWE1	9q-Amp	0.991	1
KIAA1267	TIGD4	0.991	1
MEFV	RHOA	0.991	1
MEFV	8p-Amp	0.991	1
MLL4	NOTCH1	0.991	1
NAP1L2	Amp_2q31.2	0.991	1
NSD1	VEZF1	0.991	1
NSD1	15q-Del	0.991	1
NUDT11	Amp_12p13.33	0.991	1
OR6C65	Del_14q32.32	0.991	1
PIK3R1	RHOA	0.991	1
PTEN	RB1	0.991	1
PTEN	Del_4q21.3	0.991	1
RB1	Amp_20q11.22	0.991	1
RHOA	VEZF1	0.991	1
THSD7A	3q-Del	0.991	1
VEZF1	4q-Del	0.991	1
ZNF233	Amp_2q31.2	0.991	1
12p-Amp	Amp_2q31.2	0.991	1
12p-Amp	Del_4q22.1	0.991	1
14q-Amp	1q-Amp	0.991	1
14q-Amp	Amp_2q31.2	0.991	1
14q-Amp	Del_10p15.3	0.991	1
20q-Amp	Del_2q21.2	0.991	1
20q-Amp	Del_4q35.2	0.991	1
20q-Amp	Del_10p11.21	0.991	1
3q-Amp	Del_11p15.5	0.991	1
7q-Amp	Amp_12q15	0.991	1
9q-Amp	Amp_20q11.22	0.991	1
9q-Amp	Del_21q22.3	0.991	1
11p-Del	9q-Del	0.991	1
11p-Del	Del_14q32.32	0.991	1
11q-Del	Del_19p13.3	0.991	1
18q-Del	Del_11p15.5	0.991	1
21q-Del	Amp_11q13.3	0.991	1
Amp_2q11.2	Amp_17q12	0.991	1
Amp_2q31.2	Amp_6q12	0.991	1
Amp_2q31.2	Amp_18q11.2	0.991	1
Amp_2q31.2	Del_4q22.1	0.991	1
Amp_3q26.33	Del_17q25.3	0.991	1
Amp_5p15.33	Del_4p16.3	0.991	1
Amp_5p15.33	Del_9p21.3	0.991	1
Amp_6p12.1	Amp_11p13	0.991	1
Amp_6q12	Del_10p11.21	0.991	1
Amp_12p13.33	Del_3p24.1	0.991	1
Amp_13q34	Del_10p11.21	0.991	1
Amp_15q26.3	Del_6p25.3	0.991	1
Amp_15q26.3	Del_9q21.11	0.991	1
Amp_17q12	Del_10q23.31	0.991	1
Amp_17q12	Del_11p15.5	0.991	1
Amp_Xq28	Del_11p15.5	0.991	1
Del_2q21.2	Del_9q21.11	0.991	1
Del_2q21.2	Del_Xq21.33	0.991	1
Del_4q21.3	Del_10p11.21	0.991	1
Del_4q21.3	Del_18q23	0.991	1
Del_6p25.3	Del_14q32.32	0.991	1
Del_7q31.1	Del_10p11.21	0.991	1
Del_10p15.3	Del_16q23.1	0.991	1
Del_10p15.3	Del_18q23	0.991	1
Del_10q23.31	Del_Xp22.2	0.991	1
Del_11p15.5	Del_16q23.1	0.991	1
Del_18q23	Del_Xp21.3	0.991	1
ASXL1	PTEN	0.992	1
C3orf59	EPHA2	0.992	1
CUL3	Amp_6p12.1	0.992	1
DYSF	KEAP1	0.992	1
EP300	Del_2q21.2	0.992	1
GAGE2A	Del_4p16.3	0.992	1
GAGE2A	Del_4p15.2	0.992	1
GAGE2A	Del_5q12.1	0.992	1
IRS4	RAC1	0.992	1
JUB	ZNF233	0.992	1
JUB	12p-Amp	0.992	1
KRT17	Del_16q23.3	0.992	1
MLL2	Del_2q36.2	0.992	1
NAP1L2	Amp_Xq28	0.992	1
NSD1	ZNF750	0.992	1
NSD1	Del_4p15.2	0.992	1
NSD1	Del_5q12.1	0.992	1
OR6C65	PTEN	0.992	1
PIK3CA	20p-Amp	0.992	1
PTEN	PTPN14	0.992	1
TGFBR2	Del_2q21.2	0.992	1
ZNF233	Del_4p16.3	0.992	1
ZNF233	Del_4q35.2	0.992	1
12p-Amp	Del_5q35.3	0.992	1
14q-Amp	Del_Xp22.2	0.992	1
1q-Amp	Del_19p13.3	0.992	1
20q-Amp	Amp_5p15.33	0.992	1
8p-Amp	Del_16q23.1	0.992	1
8p-Amp	Del_Xp21.3	0.992	1
11q-Del	Del_8p23.2	0.992	1
13q-Del	Del_14q11.2	0.992	1
15q-Del	Amp_18q11.2	0.992	1
18q-Del	Del_6p25.3	0.992	1
18q-Del	Del_9q21.11	0.992	1
3p-Del	Xp-Del	0.992	1
3q-Del	Amp_5p15.33	0.992	1
9p-Del	Amp_2q11.2	0.992	1
9p-Del	Amp_13q34	0.992	1
9p-Del	Del_6p25.3	0.992	1
Amp_2q11.2	Amp_7p11.2	0.992	1
Amp_2q11.2	Amp_7q21.3	0.992	1
Amp_2q31.2	Del_18q23	0.992	1
Amp_5p15.33	Del_2q36.2	0.992	1
Amp_5p15.33	Del_3p26.2	0.992	1
Amp_5p12	Amp_8p11.23	0.992	1
Amp_6q12	Amp_7p11.2	0.992	1
Amp_7q21.3	Amp_13q34	0.992	1
Amp_8p11.23	Del_1p36.21	0.992	1
Amp_15q26.3	Del_17q25.3	0.992	1
Del_2q22.1	Del_8p23.2	0.992	1
Del_2q22.1	Del_9p21.3	0.992	1
Del_2q36.2	Del_8p23.2	0.992	1
Del_2q36.2	Del_11q23.1	0.992	1
Del_5q12.1	Del_Xp22.2	0.992	1
C3orf59	NAP1L2	0.993	1
C3orf59	TIGD4	0.993	1
CDKN2A	Amp_7p11.2	0.993	1
CREBBP	TIGD4	0.993	1
CREBBP	Amp_2q11.2	0.993	1
CREBBP	Del_5q35.3	0.993	1
CUL3	NSD1	0.993	1
CUL3	Del_16q23.1	0.993	1
DYSF	FBXW7	0.993	1
DYSF	ZNF623	0.993	1
FAT1	HLA-B	0.993	1
FBXW7	Del_5q15	0.993	1
GAGE2A	7q-Amp	0.993	1
HLA-A	HRAS	0.993	1
HRAS	RAC1	0.993	1
HRAS	9q-Amp	0.993	1
IRS4	NSD1	0.993	1
MEFV	4p-Del	0.993	1
NAP1L2	Del_1p36.21	0.993	1
NLRP8	Amp_17q12	0.993	1
NSD1	Del_3p24.1	0.993	1
NUDT11	Del_3p26.2	0.993	1
OR6C65	Amp_8p11.23	0.993	1
RHOA	TIGD4	0.993	1
TP53	5q-Del	0.993	1
ZNF233	Del_Xp21.3	0.993	1
12p-Amp	7p-Amp	0.993	1
14q-Amp	4p-Del	0.993	1
1q-Amp	Amp_9p24.1	0.993	1
20p-Amp	Amp_8p11.23	0.993	1
3q-Amp	Del_1p36.21	0.993	1
7p-Amp	Del_4p16.3	0.993	1
7p-Amp	Del_7q31.1	0.993	1
7q-Amp	Amp_17q12	0.993	1
7q-Amp	Del_3p14.2	0.993	1
8p-Amp	Amp_9p13.3	0.993	1
10p-Del	Del_14q11.2	0.993	1
11q-Del	Del_5q12.1	0.993	1
13q-Del	Del_4q35.2	0.993	1
15q-Del	Del_5q35.3	0.993	1
Xp-Del	Amp_18q11.2	0.993	1
Xp-Del	Del_3p14.2	0.993	1
Amp_3q26.33	Amp_Xq28	0.993	1
Amp_3q26.33	Del_4q35.2	0.993	1
Amp_7q21.3	Amp_12p13.33	0.993	1
Amp_8p11.23	Amp_18q11.2	0.993	1
Amp_8p11.23	Del_4q35.2	0.993	1
Amp_8q24.21	Del_3p14.2	0.993	1
Del_1q44	Del_9q21.11	0.993	1
Del_4p16.3	Del_14q32.32	0.993	1
Del_4q35.2	Del_14q32.32	0.993	1
Del_6p25.3	Del_10p11.21	0.993	1
Del_6p25.3	Del_10q23.31	0.993	1
Del_7q36.1	Del_14q32.32	0.993	1
Del_8p23.2	Del_13q14.2	0.993	1
Del_9p21.3	Del_10p15.3	0.993	1
BRAF	TIGD4	0.994	1
BRAF	ZNF233	0.994	1
CUL3	Del_6p25.3	0.994	1
CUL3	Del_16q23.3	0.994	1
FBXW7	Del_4q22.1	0.994	1
FGFR3	3q-Amp	0.994	1
FGFR3	Del_13q14.2	0.994	1
GAGE2A	KDM6A	0.994	1
HLA-B	NFE2L2	0.994	1
IRS4	Amp_20q11.22	0.994	1
JUB	NFE2L2	0.994	1
JUB	15q-Del	0.994	1
KIAA1267	MLL4	0.994	1
MAPK1	ZNF233	0.994	1
NLRP8	Amp_11q13.3	0.994	1
OR6C65	Amp_20q11.22	0.994	1
OR6C65	Del_Xq21.33	0.994	1
PTEN	Del_4p16.3	0.994	1
RASA1	SMAD4	0.994	1
RASA1	Amp_17q12	0.994	1
RHOA	Amp_8q11.21	0.994	1
THSD7A	Del_3p12.1	0.994	1
TP53	Amp_5p12	0.994	1
TP53	Amp_8q11.21	0.994	1
VEZF1	Del_9p21.3	0.994	1
1q-Amp	11p-Del	0.994	1
1q-Amp	Amp_9p23	0.994	1
20p-Amp	Del_6p25.3	0.994	1
20p-Amp	Del_10p11.21	0.994	1
3q-Amp	Amp_9p13.3	0.994	1
3q-Amp	Del_3p24.1	0.994	1
3q-Amp	Del_5q35.3	0.994	1
5p-Amp	Amp_13q34	0.994	1
5p-Amp	Del_7q31.1	0.994	1
7p-Amp	4p-Del	0.994	1
7p-Amp	Del_10p15.3	0.994	1
9q-Amp	Amp_8q11.21	0.994	1
10p-Del	Del_5q35.3	0.994	1
10p-Del	Del_13q14.2	0.994	1
11q-Del	Amp_7q21.3	0.994	1
11q-Del	Del_5q35.3	0.994	1
11q-Del	Del_Xp22.2	0.994	1
13q-Del	Del_9p21.3	0.994	1
18q-Del	4q-Del	0.994	1
18q-Del	9q-Del	0.994	1
3p-Del	Del_1q44	0.994	1
3q-Del	Del_13q14.2	0.994	1
5q-Del	Del_4q35.2	0.994	1
5q-Del	Del_Xp21.3	0.994	1
9q-Del	Amp_18p11.31	0.994	1
Xp-Del	Amp_12p13.33	0.994	1
Xp-Del	Amp_18p11.31	0.994	1
Amp_2q11.2	Del_7q31.1	0.994	1
Amp_2q31.2	Amp_Xq28	0.994	1
Amp_2q31.2	Del_2q22.1	0.994	1
Amp_5p15.33	Del_3p14.2	0.994	1
Amp_5p15.33	Del_11p15.5	0.994	1
Amp_5p12	Amp_6p12.1	0.994	1
Amp_5p12	Del_3p12.1	0.994	1
Amp_5p12	Del_7q36.1	0.994	1
Amp_5p12	Del_18q23	0.994	1
Amp_6p12.1	Del_17q25.3	0.994	1
Amp_7q21.3	Amp_18q11.2	0.994	1
Amp_7q21.3	Del_6p25.3	0.994	1
Amp_7q21.3	Del_9q21.11	0.994	1
Amp_11q13.3	Del_5q15	0.994	1
Amp_12p13.33	Del_16q23.1	0.994	1
Amp_13q34	Del_1p36.21	0.994	1
Amp_15q26.3	Del_18q23	0.994	1
Amp_17q12	Del_18q23	0.994	1
Amp_18p11.31	Del_1p13.2	0.994	1
Amp_18q11.2	Del_3p26.2	0.994	1
Amp_18q11.2	Del_4p16.3	0.994	1
Amp_20q11.22	Del_4q35.2	0.994	1
Del_2q21.2	Del_4p16.3	0.994	1
Del_2q22.1	Del_4p16.3	0.994	1
Del_3p26.2	Del_Xp22.2	0.994	1
Del_4q21.3	Del_14q32.32	0.994	1
Del_4q22.1	Del_7q31.1	0.994	1
Del_7q36.1	Del_16q23.1	0.994	1
Del_8p23.2	Del_11q23.1	0.994	1
Del_11q23.1	Del_Xp22.2	0.994	1
Del_17q25.3	Del_18q23	0.994	1
ADAM19	7q-Amp	0.995	1
ASXL1	KRTAP5-5	0.995	1
C3orf59	Del_7q31.1	0.995	1
EPHA2	KDM6A	0.995	1
FBXW7	MLL4	0.995	1
FGFR3	Amp_9p23	0.995	1
GAGE2A	1q-Amp	0.995	1
GAGE2A	4p-Del	0.995	1
HLA-B	PTPN14	0.995	1
KDM6A	Del_2q22.1	0.995	1
KRTAP5-5	OR6C65	0.995	1
NLRP8	ZNF623	0.995	1
PIK3R1	TGFBR2	0.995	1
PTEN	Del_21q22.3	0.995	1
TP53	14q-Amp	0.995	1
TP53	Del_2q22.1	0.995	1
VEZF1	Del_8p23.2	0.995	1
12p-Amp	3p-Del	0.995	1
12p-Amp	9p-Del	0.995	1
12p-Amp	Amp_9p13.3	0.995	1
12p-Amp	Del_3p14.2	0.995	1
12p-Amp	Del_16q23.1	0.995	1
14q-Amp	9q-Amp	0.995	1
14q-Amp	Amp_9p13.3	0.995	1
1q-Amp	4p-Del	0.995	1
20q-Amp	8p-Amp	0.995	1
20q-Amp	Del_10p15.3	0.995	1
3q-Amp	Amp_9p23	0.995	1
3q-Amp	Del_4q22.1	0.995	1
3q-Amp	Del_5q15	0.995	1
3q-Amp	Del_13q12.11	0.995	1
7p-Amp	Amp_17q12	0.995	1
8q-Amp	9q-Amp	0.995	1
11q-Del	Amp_13q34	0.995	1
21q-Del	Amp_18p11.31	0.995	1
3p-Del	Amp_12p13.33	0.995	1
3p-Del	Amp_18p11.31	0.995	1
3p-Del	Del_14q32.32	0.995	1
3q-Del	8p-Del	0.995	1
3q-Del	Del_14q32.32	0.995	1
4q-Del	Del_11q23.1	0.995	1
8p-Del	Del_7q31.1	0.995	1
9p-Del	Amp_11q13.3	0.995	1
9q-Del	Amp_2q31.2	0.995	1
9q-Del	Del_10p11.21	0.995	1
Amp_2q31.2	Amp_8q24.21	0.995	1
Amp_3q26.33	Del_16q23.3	0.995	1
Amp_5p15.33	Amp_7q21.3	0.995	1
Amp_5p12	Del_5q12.1	0.995	1
Amp_6p12.1	Del_5q12.1	0.995	1
Amp_6p12.1	Del_18q23	0.995	1
Amp_6p12.1	Del_Xp21.3	0.995	1
Amp_7p11.2	Amp_7q21.3	0.995	1
Amp_8q24.21	Amp_12q15	0.995	1
Amp_8q24.21	Amp_13q34	0.995	1
Amp_8q24.21	Del_3p24.1	0.995	1
Amp_8q24.21	Del_Xp21.3	0.995	1
Amp_11q13.3	Del_18q23	0.995	1
Amp_17q12	Del_1p36.21	0.995	1
Amp_18p11.31	Del_5q35.3	0.995	1
Amp_18q11.2	Del_3p12.1	0.995	1
Amp_20q11.22	Del_16q23.1	0.995	1
Del_1p36.21	Del_10p15.3	0.995	1
Del_1p13.2	Del_2q22.1	0.995	1
Del_2q21.2	Del_4p15.2	0.995	1
Del_2q22.1	Del_2q36.2	0.995	1
Del_2q22.1	Del_4p15.2	0.995	1
Del_2q36.2	Del_9q21.11	0.995	1
Del_3p24.1	Del_Xp21.3	0.995	1
Del_3p14.2	Del_14q32.32	0.995	1
Del_4q22.1	Del_10p15.3	0.995	1
Del_5q35.3	Del_11q23.1	0.995	1
Del_6p25.3	Del_9q21.11	0.995	1
ADAM19	CREBBP	0.996	1
ADAM19	IRS4	0.996	1
CASP8	CDKN2A	0.996	1
CASP8	PTPN14	0.996	1
CDKN2A	RASA1	0.996	1
CDKN2A	Amp_7q21.3	0.996	1
CUL3	TP53	0.996	1
CUL3	5q-Del	0.996	1
CUL3	Del_10q23.31	0.996	1
CUL3	Del_13q12.11	0.996	1
EMG1	Del_7q31.1	0.996	1
EP300	HRAS	0.996	1
FAT1	RASA1	0.996	1
FBXW7	Del_2q21.2	0.996	1
HLA-A	IRS4	0.996	1
JUB	Del_3p24.1	0.996	1
JUB	Del_3p12.1	0.996	1
KEAP1	PIK3R1	0.996	1
KRT17	MAPK1	0.996	1
MAPK1	ZNF750	0.996	1
MEFV	TIGD4	0.996	1
MLL2	5p-Amp	0.996	1
NAP1L2	VEZF1	0.996	1
NFE2L2	PIK3CA	0.996	1
NUDT11	Del_18q23	0.996	1
OR6C65	ZNF623	0.996	1
PTEN	9p-Del	0.996	1
PTEN	Del_7q36.1	0.996	1
PTPN14	Del_13q12.11	0.996	1
RASA1	Del_4q35.2	0.996	1
RASA1	Del_10p11.21	0.996	1
RASA1	Del_18q23	0.996	1
RB1	Del_3p14.2	0.996	1
SMAD4	18q-Del	0.996	1
TP53	Del_14q11.2	0.996	1
TP53	Del_Xp22.2	0.996	1
12p-Amp	5p-Amp	0.996	1
12p-Amp	4q-Del	0.996	1
12p-Amp	Del_16q23.3	0.996	1
20p-Amp	8q-Amp	0.996	1
20q-Amp	9q-Amp	0.996	1
3q-Amp	Del_19p13.3	0.996	1
7q-Amp	Del_1p36.21	0.996	1
7q-Amp	Del_1p13.2	0.996	1
8p-Amp	Amp_13q34	0.996	1
8p-Amp	Amp_18q11.2	0.996	1
8p-Amp	Del_14q32.32	0.996	1
8q-Amp	Amp_5p15.33	0.996	1
8q-Amp	Amp_5p12	0.996	1
11p-Del	8p-Del	0.996	1
11p-Del	Del_17q25.3	0.996	1
11q-Del	Del_1p36.21	0.996	1
13q-Del	Amp_12p13.33	0.996	1
13q-Del	Del_9q21.11	0.996	1
15q-Del	18q-Del	0.996	1
18q-Del	Del_4p16.3	0.996	1
21q-Del	Del_4q22.1	0.996	1
21q-Del	Del_4q35.2	0.996	1
21q-Del	Del_10p15.3	0.996	1
3p-Del	Amp_11q13.3	0.996	1
3q-Del	Del_16q23.1	0.996	1
4p-Del	Amp_5p15.33	0.996	1
8p-Del	Del_4q22.1	0.996	1
8p-Del	Del_6p25.3	0.996	1
9q-Del	Del_1p13.2	0.996	1
9q-Del	Del_1q44	0.996	1
9q-Del	Del_Xp21.3	0.996	1
Amp_2q11.2	Del_3p24.1	0.996	1
Amp_3q26.33	Del_9p21.3	0.996	1
Amp_5p15.33	Amp_11q13.3	0.996	1
Amp_5p15.33	Amp_12p13.33	0.996	1
Amp_5p12	Amp_Xq28	0.996	1
Amp_5p12	Del_1q44	0.996	1
Amp_7q21.3	Del_9p21.3	0.996	1
Amp_8p11.23	Del_17q25.3	0.996	1
Amp_8q24.21	Del_1p13.2	0.996	1
Amp_8q24.21	Del_3p12.1	0.996	1
Amp_8q24.21	Del_8p23.2	0.996	1
Amp_11q13.3	Del_Xq21.33	0.996	1
Amp_12p13.33	Del_3p26.2	0.996	1
Amp_12p13.33	Del_3p12.1	0.996	1
Amp_12p13.33	Del_5q15	0.996	1
Amp_18p11.31	Del_9p21.3	0.996	1
Del_1p36.21	Del_9p21.3	0.996	1
Del_1p13.2	Del_9p21.3	0.996	1
Del_1p13.2	Del_17q25.3	0.996	1
Del_2q21.2	Del_4q21.3	0.996	1
Del_2q36.2	Del_17q25.3	0.996	1
Del_4q22.1	Del_9q21.11	0.996	1
Del_4q35.2	Del_10p15.3	0.996	1
Del_4q35.2	Del_13q14.2	0.996	1
Del_5q35.3	Del_6p25.3	0.996	1
Del_7q31.1	Del_16q23.1	0.996	1
Del_7q31.1	Del_18q23	0.996	1
Del_7q36.1	Del_16q23.3	0.996	1
Del_10p15.3	Del_13q14.2	0.996	1
Del_10p11.21	Del_14q11.2	0.996	1
Del_10q23.31	Del_21q22.3	0.996	1
BRAF	MLL4	0.997	1
CREBBP	HLA-B	0.997	1
CREBBP	Del_10p11.21	0.997	1
CUL3	EMG1	0.997	1
CUL3	Amp_2q31.2	0.997	1
EPHA2	TGFBR2	0.997	1
FAT1	MLL4	0.997	1
FBXW7	Del_1p36.21	0.997	1
FGFR3	IRS4	0.997	1
FGFR3	NSD1	0.997	1
FGFR3	RB1	0.997	1
HLA-B	NAP1L2	0.997	1
HLA-B	RAC1	0.997	1
HRAS	MLL4	0.997	1
HUWE1	PIK3R1	0.997	1
HUWE1	TGFBR2	0.997	1
KDM6A	Del_7q31.1	0.997	1
KIAA1267	MLL2	0.997	1
KIAA1267	Del_1p36.21	0.997	1
KIAA1267	Del_2q22.1	0.997	1
MLL2	Amp_5p15.33	0.997	1
MLL4	RB1	0.997	1
NLRP8	9q-Del	0.997	1
NSD1	RHOA	0.997	1
NSD1	3q-Del	0.997	1
NSD1	Del_4p16.3	0.997	1
NSD1	Del_5q15	0.997	1
NUDT11	Amp_18p11.31	0.997	1
NUDT11	Del_9p21.3	0.997	1
OR6C65	Del_1q44	0.997	1
THSD7A	Del_13q12.11	0.997	1
TIGD4	3p-Del	0.997	1
TP53	8p-Del	0.997	1
TP53	Amp_2q31.2	0.997	1
TP53	Del_4p16.3	0.997	1
VEZF1	Amp_2q11.2	0.997	1
12p-Amp	14q-Amp	0.997	1
12p-Amp	Amp_7q21.3	0.997	1
14q-Amp	Amp_3q26.33	0.997	1
1q-Amp	Amp_2q31.2	0.997	1
1q-Amp	Del_4p16.3	0.997	1
3q-Amp	Amp_20q11.22	0.997	1
3q-Amp	Amp_Xq28	0.997	1
5p-Amp	8q-Amp	0.997	1
5p-Amp	Amp_8p11.23	0.997	1
5p-Amp	Amp_8q24.21	0.997	1
5p-Amp	Amp_18q11.2	0.997	1
7p-Amp	Amp_11q13.3	0.997	1
7q-Amp	21q-Del	0.997	1
7q-Amp	8p-Del	0.997	1
7q-Amp	Amp_5p15.33	0.997	1
7q-Amp	Del_3p26.2	0.997	1
7q-Amp	Del_10p15.3	0.997	1
7q-Amp	Del_19p13.3	0.997	1
8p-Amp	Xp-Del	0.997	1
8q-Amp	Del_Xp21.3	0.997	1
10p-Del	11p-Del	0.997	1
11p-Del	21q-Del	0.997	1
11q-Del	Xp-Del	0.997	1
15q-Del	3q-Del	0.997	1
21q-Del	Amp_2q31.2	0.997	1
21q-Del	Amp_15q26.3	0.997	1
21q-Del	Del_19p13.3	0.997	1
3q-Del	Amp_5p12	0.997	1
3q-Del	Del_8p23.2	0.997	1
3q-Del	Del_16q23.3	0.997	1
3q-Del	Del_18q23	0.997	1
4q-Del	Del_10p15.3	0.997	1
8p-Del	Del_17q25.3	0.997	1
8p-Del	Del_21q22.3	0.997	1
9p-Del	Amp_5p12	0.997	1
9q-Del	Del_11q23.1	0.997	1
Xp-Del	Amp_5p15.33	0.997	1
Xp-Del	Del_3p26.2	0.997	1
Amp_2q11.2	Amp_3q26.33	0.997	1
Amp_2q11.2	Del_2q22.1	0.997	1
Amp_2q31.2	Del_1p13.2	0.997	1
Amp_2q31.2	Del_5q12.1	0.997	1
Amp_5p15.33	Del_4p15.2	0.997	1
Amp_5p15.33	Del_5q12.1	0.997	1
Amp_5p12	Amp_18q11.2	0.997	1
Amp_6q12	Amp_18p11.31	0.997	1
Amp_7q21.3	Amp_17q12	0.997	1
Amp_7q21.3	Del_4p16.3	0.997	1
Amp_8p11.23	Del_14q32.32	0.997	1
Amp_8q24.21	Amp_12p13.33	0.997	1
Amp_11p13	Amp_11q13.3	0.997	1
Amp_11q13.3	Amp_13q22.1	0.997	1
Amp_11q13.3	Del_3p24.1	0.997	1
Amp_11q13.3	Del_3p14.2	0.997	1
Amp_11q13.3	Del_5q12.1	0.997	1
Amp_12p13.33	Del_5q35.3	0.997	1
Amp_12p13.33	Del_Xp21.3	0.997	1
Amp_15q26.3	Del_21q22.3	0.997	1
Amp_17q12	Del_11q23.1	0.997	1
Amp_17q12	Del_13q12.11	0.997	1
Amp_18p11.31	Del_3p12.1	0.997	1
Amp_20q11.22	Del_16q23.3	0.997	1
Del_3p24.1	Del_14q32.32	0.997	1
Del_4q21.3	Del_9q21.11	0.997	1
Del_4q22.1	Del_10p11.21	0.997	1
Del_4q22.1	Del_18q23	0.997	1
Del_4q35.2	Del_9p21.3	0.997	1
Del_5q15	Del_16q23.3	0.997	1
Del_5q35.3	Del_10p15.3	0.997	1
Del_6p25.3	Del_13q14.2	0.997	1
Del_6p25.3	Del_19p13.3	0.997	1
Del_7q31.1	Del_16q23.3	0.997	1
Del_7q36.1	Del_10p15.3	0.997	1
Del_9q21.11	Del_19p13.3	0.997	1
Del_10q23.31	Del_14q32.32	0.997	1
Del_11p15.5	Del_14q32.32	0.997	1
BRAF	OR6C65	0.998	1
BRAF	PTPN14	0.998	1
BRAF	Amp_8p11.23	0.998	1
C3orf59	THSD7A	0.998	1
CDKN2A	7q-Amp	0.998	1
CREBBP	FGFR3	0.998	1
CREBBP	RHOA	0.998	1
CUL3	13q-Del	0.998	1
CUL3	Del_1p36.21	0.998	1
CUL3	Del_3p24.1	0.998	1
CUL3	Del_3p14.2	0.998	1
CUL3	Del_4q21.3	0.998	1
CUL3	Del_4q22.1	0.998	1
FGFR3	13q-Del	0.998	1
HLA-B	KEAP1	0.998	1
HUWE1	SMAD4	0.998	1
IRS4	10p-Del	0.998	1
JUB	Del_3p26.2	0.998	1
JUB	Del_3p14.2	0.998	1
JUB	Del_14q11.2	0.998	1
KDM6A	Del_7q36.1	0.998	1
KEAP1	PTEN	0.998	1
KRT17	ZNF233	0.998	1
MEFV	MLL4	0.998	1
NAP1L2	Del_2q36.2	0.998	1
NLRP8	PIK3R1	0.998	1
NOTCH1	PTPN14	0.998	1
NSD1	Del_3p14.2	0.998	1
NUDT11	PTPN14	0.998	1
PIK3R1	Del_4p16.3	0.998	1
PTEN	Del_1q44	0.998	1
PTEN	Del_11q23.1	0.998	1
RHOA	8p-Amp	0.998	1
RHOA	Amp_8q24.21	0.998	1
TP53	3p-Del	0.998	1
TP53	Xp-Del	0.998	1
TP53	Amp_5p15.33	0.998	1
TP53	Amp_12q15	0.998	1
TP53	Del_3p14.2	0.998	1
12p-Amp	Amp_5p12	0.998	1
12p-Amp	Amp_7p11.2	0.998	1
14q-Amp	7q-Amp	0.998	1
14q-Amp	Amp_18p11.31	0.998	1
1q-Amp	7q-Amp	0.998	1
1q-Amp	Amp_2q11.2	0.998	1
1q-Amp	Del_3p12.1	0.998	1
1q-Amp	Del_5q15	0.998	1
20p-Amp	Amp_8q24.21	0.998	1
20p-Amp	Amp_11p13	0.998	1
20q-Amp	8q-Amp	0.998	1
20q-Amp	Amp_11p13	0.998	1
3q-Amp	Amp_9p24.1	0.998	1
3q-Amp	Del_1p13.2	0.998	1
3q-Amp	Del_2q36.2	0.998	1
7q-Amp	4p-Del	0.998	1
7q-Amp	Del_8p23.2	0.998	1
8p-Amp	Del_Xp22.2	0.998	1
10p-Del	4q-Del	0.998	1
10p-Del	Del_4q35.2	0.998	1
11p-Del	18q-Del	0.998	1
11p-Del	Amp_13q34	0.998	1
11q-Del	5q-Del	0.998	1
11q-Del	Del_16q23.1	0.998	1
11q-Del	Del_18q23	0.998	1
15q-Del	9p-Del	0.998	1
15q-Del	Del_5q12.1	0.998	1
15q-Del	Del_5q15	0.998	1
15q-Del	Del_13q14.2	0.998	1
18q-Del	Del_19p13.3	0.998	1
21q-Del	Del_4q21.3	0.998	1
3p-Del	Del_Xp21.3	0.998	1
3q-Del	5q-Del	0.998	1
4p-Del	Amp_15q26.3	0.998	1
4p-Del	Del_17q25.3	0.998	1
4q-Del	Amp_13q22.1	0.998	1
4q-Del	Del_9q21.11	0.998	1
5q-Del	Amp_12p13.33	0.998	1
5q-Del	Amp_18p11.31	0.998	1
5q-Del	Del_7q31.1	0.998	1
5q-Del	Del_8p23.2	0.998	1
5q-Del	Del_16q23.1	0.998	1
8p-Del	Amp_7p11.2	0.998	1
8p-Del	Del_5q35.3	0.998	1
Xp-Del	Del_14q11.2	0.998	1
Amp_2q11.2	Amp_12p13.33	0.998	1
Amp_2q11.2	Amp_18q11.2	0.998	1
Amp_2q11.2	Del_5q15	0.998	1
Amp_2q11.2	Del_10p11.21	0.998	1
Amp_2q11.2	Del_10q23.31	0.998	1
Amp_2q31.2	Del_21q22.3	0.998	1
Amp_3q26.33	Amp_5p12	0.998	1
Amp_3q26.33	Amp_15q26.3	0.998	1
Amp_5p15.33	Del_3p12.1	0.998	1
Amp_5p12	Del_7q31.1	0.998	1
Amp_6q12	Amp_7q21.3	0.998	1
Amp_6q12	Del_9q21.11	0.998	1
Amp_6q12	Del_17q25.3	0.998	1
Amp_7q21.3	Del_4p15.2	0.998	1
Amp_7q21.3	Del_7q31.1	0.998	1
Amp_7q21.3	Del_7q36.1	0.998	1
Amp_8p11.23	Del_1p13.2	0.998	1
Amp_8q24.21	Amp_18q11.2	0.998	1
Amp_8q24.21	Del_18q23	0.998	1
Amp_9p13.3	Amp_18q11.2	0.998	1
Amp_12p13.33	Amp_18q11.2	0.998	1
Amp_12p13.33	Del_3p14.2	0.998	1
Amp_13q34	Del_9q21.11	0.998	1
Amp_15q26.3	Del_5q35.3	0.998	1
Amp_18p11.31	Del_3p26.2	0.998	1
Amp_18q11.2	Del_3p14.2	0.998	1
Amp_20q11.22	Del_Xq21.33	0.998	1
Del_1p13.2	Del_4q22.1	0.998	1
Del_1p13.2	Del_16q23.3	0.998	1
Del_2q36.2	Del_16q23.3	0.998	1
Del_2q36.2	Del_18q23	0.998	1
Del_3p14.2	Del_Xp22.2	0.998	1
Del_4p16.3	Del_17q25.3	0.998	1
Del_4p15.2	Del_19p13.3	0.998	1
Del_4q22.1	Del_14q32.32	0.998	1
Del_6p25.3	Del_14q11.2	0.998	1
Del_13q14.2	Del_14q11.2	0.998	1
Del_14q11.2	Del_21q22.3	0.998	1
Del_14q11.2	Del_Xp22.2	0.998	1
Del_18q23	Del_19p13.3	0.998	1
ADAM19	BRAF	0.999	1
ADAM19	KIAA1267	0.999	1
ADAM19	MAPK1	0.999	1
ADAM19	RHOA	0.999	1
BRAF	ZNF623	0.999	1
BRAF	8p-Amp	0.999	1
C3orf59	EMG1	0.999	1
C3orf59	RHOA	0.999	1
CREBBP	NFE2L2	0.999	1
CREBBP	ZNF750	0.999	1
CUL3	12p-Amp	0.999	1
CUL3	4p-Del	0.999	1
CUL3	4q-Del	0.999	1
CUL3	Del_3p26.2	0.999	1
CUL3	Del_5q35.3	0.999	1
EP300	HLA-B	0.999	1
EPHA2	Del_2q21.2	0.999	1
FAT1	HLA-A	0.999	1
FBXW7	GAGE2A	0.999	1
FGFR3	11q-Del	0.999	1
GAGE2A	MLL2	0.999	1
GAGE2A	TIGD4	0.999	1
GAGE2A	ZNF233	0.999	1
GAGE2A	Del_1p36.21	0.999	1
GAGE2A	Del_11p15.5	0.999	1
HLA-B	HUWE1	0.999	1
IRS4	RB1	0.999	1
JUB	3p-Del	0.999	1
JUB	Del_5q12.1	0.999	1
JUB	Del_5q15	0.999	1
KRT17	KRTAP5-5	0.999	1
NSD1	THSD7A	0.999	1
NSD1	3p-Del	0.999	1
NSD1	4p-Del	0.999	1
NSD1	Del_3p26.2	0.999	1
NSD1	Del_5q35.3	0.999	1
NSD1	Del_9p21.3	0.999	1
NUDT11	12p-Amp	0.999	1
NUDT11	18q-Del	0.999	1
NUDT11	21q-Del	0.999	1
OR6C65	TIGD4	0.999	1
OR6C65	Del_11q23.1	0.999	1
PIK3CA	Amp_3q26.33	0.999	1
PIK3R1	4q-Del	0.999	1
PTEN	9q-Del	0.999	1
PTEN	Del_4p15.2	0.999	1
RB1	Del_16q23.3	0.999	1
TP53	Amp_6p12.1	0.999	1
TP53	Amp_6q12	0.999	1
TP53	Del_21q22.3	0.999	1
ZNF233	1q-Amp	0.999	1
ZNF623	Amp_8p11.23	0.999	1
12p-Amp	Amp_3q26.33	0.999	1
12p-Amp	Amp_12q15	0.999	1
12p-Amp	Amp_13q22.1	0.999	1
14q-Amp	8q-Amp	0.999	1
14q-Amp	Del_Xp21.3	0.999	1
1q-Amp	3p-Del	0.999	1
20p-Amp	Del_Xq21.33	0.999	1
20q-Amp	Del_5q12.1	0.999	1
3q-Amp	4q-Del	0.999	1
3q-Amp	Del_3p12.1	0.999	1
7q-Amp	Amp_7p11.2	0.999	1
7q-Amp	Amp_12p13.33	0.999	1
7q-Amp	Del_2q36.2	0.999	1
7q-Amp	Del_3p12.1	0.999	1
9q-Amp	Amp_3q26.33	0.999	1
10p-Del	5q-Del	0.999	1
10p-Del	9p-Del	0.999	1
10p-Del	Amp_3q26.33	0.999	1
10p-Del	Del_4q22.1	0.999	1
10p-Del	Del_7q36.1	0.999	1
10p-Del	Del_11q23.1	0.999	1
10p-Del	Del_13q12.11	0.999	1
11p-Del	Amp_15q26.3	0.999	1
11p-Del	Del_5q35.3	0.999	1
11p-Del	Del_10q23.31	0.999	1
11q-Del	Del_7q31.1	0.999	1
11q-Del	Del_16q23.3	0.999	1
13q-Del	Del_14q32.32	0.999	1
18q-Del	Del_2q36.2	0.999	1
18q-Del	Del_4p15.2	0.999	1
18q-Del	Del_4q22.1	0.999	1
18q-Del	Del_7q36.1	0.999	1
18q-Del	Del_11q23.1	0.999	1
21q-Del	8p-Del	0.999	1
21q-Del	Del_9p21.3	0.999	1
21q-Del	Del_13q12.11	0.999	1
3q-Del	Xp-Del	0.999	1
3q-Del	Del_2q36.2	0.999	1
3q-Del	Del_14q11.2	0.999	1
3q-Del	Del_Xp21.3	0.999	1
4p-Del	Amp_18q11.2	0.999	1
4p-Del	Del_6p25.3	0.999	1
4p-Del	Del_7q31.1	0.999	1
4q-Del	8p-Del	0.999	1
4q-Del	Del_14q32.32	0.999	1
5q-Del	8p-Del	0.999	1
5q-Del	Del_1p13.2	0.999	1
5q-Del	Del_2q36.2	0.999	1
5q-Del	Del_4q22.1	0.999	1
5q-Del	Del_10p15.3	0.999	1
5q-Del	Del_14q11.2	0.999	1
5q-Del	Del_16q23.3	0.999	1
8p-Del	Del_2q36.2	0.999	1
8p-Del	Del_11p15.5	0.999	1
9p-Del	Del_10p15.3	0.999	1
9p-Del	Del_17q25.3	0.999	1
9p-Del	Del_19p13.3	0.999	1
9q-Del	Del_2q36.2	0.999	1
9q-Del	Del_10q23.31	0.999	1
Amp_2q11.2	Amp_2q31.2	0.999	1
Amp_2q11.2	Amp_Xq28	0.999	1
Amp_2q11.2	Del_3p14.2	0.999	1
Amp_2q11.2	Del_5q35.3	0.999	1
Amp_2q11.2	Del_Xp22.2	0.999	1
Amp_2q11.2	Del_Xp21.3	0.999	1
Amp_2q31.2	Amp_12p13.33	0.999	1
Amp_2q31.2	Del_10p11.21	0.999	1
Amp_2q31.2	Del_Xp22.2	0.999	1
Amp_3q26.33	Amp_20q11.22	0.999	1
Amp_3q26.33	Del_7q36.1	0.999	1
Amp_3q26.33	Del_10q23.31	0.999	1
Amp_3q26.33	Del_14q11.2	0.999	1
Amp_3q26.33	Del_14q32.32	0.999	1
Amp_3q26.33	Del_21q22.3	0.999	1
Amp_5p15.33	Amp_8p11.23	0.999	1
Amp_5p15.33	Amp_18q11.2	0.999	1
Amp_5p15.33	Del_7q31.1	0.999	1
Amp_5p15.33	Del_18q23	0.999	1
Amp_5p12	Amp_8q24.21	0.999	1
Amp_6p12.1	Del_6p25.3	0.999	1
Amp_6q12	Amp_8q24.21	0.999	1
Amp_6q12	Amp_Xq28	0.999	1
Amp_6q12	Del_18q23	0.999	1
Amp_6q12	Del_Xq21.33	0.999	1
Amp_7q21.3	Del_8p23.2	0.999	1
Amp_8q24.21	Amp_15q26.3	0.999	1
Amp_8q24.21	Amp_18p11.31	0.999	1
Amp_8q24.21	Amp_20q11.22	0.999	1
Amp_8q24.21	Amp_Xq28	0.999	1
Amp_11q13.3	Amp_13q34	0.999	1
Amp_11q13.3	Del_3p26.2	0.999	1
Amp_11q13.3	Del_8p23.2	0.999	1
Amp_12p13.33	Del_5q12.1	0.999	1
Amp_12p13.33	Del_13q12.11	0.999	1
Amp_12p13.33	Del_17q25.3	0.999	1
Amp_13q22.1	Amp_13q34	0.999	1
Amp_15q26.3	Del_4p16.3	0.999	1
Amp_15q26.3	Del_4p15.2	0.999	1
Amp_15q26.3	Del_5q15	0.999	1
Amp_15q26.3	Del_11p15.5	0.999	1
Amp_18p11.31	Del_13q12.11	0.999	1
Amp_18p11.31	Del_13q14.2	0.999	1
Amp_18q11.2	Del_5q35.3	0.999	1
Amp_18q11.2	Del_18q23	0.999	1
Amp_20q11.22	Del_14q32.32	0.999	1
Amp_Xq28	Del_Xp22.2	0.999	1
Del_1p36.21	Del_11q23.1	0.999	1
Del_1p36.21	Del_14q32.32	0.999	1
Del_1p36.21	Del_16q23.1	0.999	1
Del_1p13.2	Del_7q31.1	0.999	1
Del_1p13.2	Del_10q23.31	0.999	1
Del_1p13.2	Del_11p15.5	0.999	1
Del_1p13.2	Del_13q12.11	0.999	1
Del_1p13.2	Del_16q23.1	0.999	1
Del_1q44	Del_10p11.21	0.999	1
Del_2q21.2	Del_2q36.2	0.999	1
Del_2q36.2	Del_6p25.3	0.999	1
Del_3p26.2	Del_Xp21.3	0.999	1
Del_3p14.2	Del_Xp21.3	0.999	1
Del_3p12.1	Del_Xp21.3	0.999	1
Del_4p16.3	Del_10q23.31	0.999	1
Del_4p16.3	Del_16q23.3	0.999	1
Del_4p16.3	Del_19p13.3	0.999	1
Del_4q21.3	Del_11q23.1	0.999	1
Del_4q22.1	Del_5q35.3	0.999	1
Del_4q22.1	Del_21q22.3	0.999	1
Del_4q35.2	Del_5q12.1	0.999	1
Del_4q35.2	Del_6p25.3	0.999	1
Del_4q35.2	Del_9q21.11	0.999	1
Del_4q35.2	Del_11p15.5	0.999	1
Del_4q35.2	Del_14q11.2	0.999	1
Del_5q12.1	Del_6p25.3	0.999	1
Del_5q15	Del_6p25.3	0.999	1
Del_5q35.3	Del_16q23.1	0.999	1
Del_5q35.3	Del_16q23.3	0.999	1
Del_6p25.3	Del_11q23.1	0.999	1
Del_6p25.3	Del_17q25.3	0.999	1
Del_6p25.3	Del_18q23	0.999	1
Del_7q31.1	Del_8p23.2	0.999	1
Del_7q36.1	Del_8p23.2	0.999	1
Del_7q36.1	Del_10q23.31	0.999	1
Del_9p21.3	Del_17q25.3	0.999	1
Del_9q21.11	Del_11q23.1	0.999	1
Del_9q21.11	Del_13q14.2	0.999	1
Del_9q21.11	Del_17q25.3	0.999	1
Del_10p15.3	Del_13q12.11	0.999	1
Del_10p15.3	Del_21q22.3	0.999	1
Del_10q23.31	Del_18q23	0.999	1
Del_11p15.5	Del_21q22.3	0.999	1
Del_13q14.2	Del_18q23	0.999	1
Del_14q11.2	Del_Xp21.3	0.999	1
ADAM19	DYSF	1	1
ADAM19	NSD1	1	1
BRAF	EPHA2	1	1
BRAF	HLA-A	1	1
BRAF	MEFV	1	1
C3orf59	HLA-A	1	1
CASP8	EP300	1	1
CASP8	EPHA2	1	1
CASP8	FAT1	1	1
CASP8	HLA-A	1	1
CASP8	HLA-B	1	1
CASP8	HRAS	1	1
CASP8	HUWE1	1	1
CASP8	KIAA1267	1	1
CASP8	MLL4	1	1
CASP8	NOTCH1	1	1
CASP8	TGFBR2	1	1
CASP8	Del_2q21.2	1	1
CDKN2A	FAT1	1	1
CDKN2A	TP53	1	1
CDKN2A	14q-Amp	1	1
CUL3	3p-Del	1	1
CUL3	9p-Del	1	1
CUL3	Del_3p12.1	1	1
CUL3	Del_4p16.3	1	1
CUL3	Del_4p15.2	1	1
CUL3	Del_5q12.1	1	1
CUL3	Del_5q15	1	1
CUL3	Del_9p21.3	1	1
DYSF	NSD1	1	1
EMG1	RAC1	1	1
EPHA2	MLL4	1	1
FAT1	FBXW7	1	1
FAT1	HRAS	1	1
FAT1	NOTCH1	1	1
FAT1	RAC1	1	1
FBXW7	Del_4q21.3	1	1
FGFR3	MAPK1	1	1
FGFR3	ZNF750	1	1
GAGE2A	TP53	1	1
GAGE2A	Amp_3q26.33	1	1
GAGE2A	Del_6p25.3	1	1
HLA-A	HLA-B	1	1
HLA-B	HRAS	1	1
HUWE1	MAPK1	1	1
KDM6A	KIAA1267	1	1
KRT17	MEFV	1	1
MEFV	OR6C65	1	1
NAP1L2	TP53	1	1
NAP1L2	Del_1q44	1	1
NSD1	5q-Del	1	1
NSD1	9p-Del	1	1
NSD1	9q-Del	1	1
NSD1	Amp_18p11.31	1	1
NSD1	Del_3p12.1	1	1
NSD1	Del_13q12.11	1	1
NSD1	Del_18q23	1	1
NUDT11	Del_21q22.3	1	1
PIK3CA	3q-Amp	1	1
PTEN	4p-Del	1	1
PTEN	Del_9q21.11	1	1
PTEN	Del_10q23.31	1	1
RASA1	Del_1p13.2	1	1
RB1	Del_10q23.31	1	1
RB1	Del_16q23.1	1	1
TIGD4	Amp_12q15	1	1
TP53	18q-Del	1	1
TP53	21q-Del	1	1
TP53	9p-Del	1	1
TP53	Amp_2q11.2	1	1
TP53	Amp_7p11.2	1	1
TP53	Amp_7q21.3	1	1
TP53	Amp_8q24.21	1	1
TP53	Amp_11q13.3	1	1
TP53	Del_1p13.2	1	1
TP53	Del_1q44	1	1
TP53	Del_3p26.2	1	1
TP53	Del_3p24.1	1	1
TP53	Del_3p12.1	1	1
TP53	Del_5q12.1	1	1
TP53	Del_5q15	1	1
TP53	Del_5q35.3	1	1
TP53	Del_8p23.2	1	1
TP53	Del_9p21.3	1	1
TP53	Del_10p11.21	1	1
TP53	Del_18q23	1	1
TP53	Del_Xp21.3	1	1
VEZF1	Amp_6p12.1	1	1
ZNF233	Del_Xp22.2	1	1
12p-Amp	Amp_12p13.33	1	1
12p-Amp	Amp_18q11.2	1	1
14q-Amp	7p-Amp	1	1
14q-Amp	8p-Amp	1	1
14q-Amp	Amp_6q12	1	1
14q-Amp	Amp_7p11.2	1	1
14q-Amp	Amp_8q11.21	1	1
14q-Amp	Amp_8q24.21	1	1
14q-Amp	Amp_11q13.3	1	1
1q-Amp	8p-Del	1	1
1q-Amp	Amp_3q26.33	1	1
20p-Amp	20q-Amp	1	1
20p-Amp	5p-Amp	1	1
20p-Amp	Amp_5p15.33	1	1
20p-Amp	Amp_5p12	1	1
20p-Amp	Amp_8q11.21	1	1
20p-Amp	Amp_20q11.22	1	1
20p-Amp	Del_5q12.1	1	1
20q-Amp	5p-Amp	1	1
20q-Amp	Amp_5p12	1	1
20q-Amp	Amp_8q11.21	1	1
20q-Amp	Amp_8q24.21	1	1
20q-Amp	Amp_20q11.22	1	1
20q-Amp	Del_Xq21.33	1	1
3q-Amp	9q-Amp	1	1
3q-Amp	11q-Del	1	1
3q-Amp	13q-Del	1	1
3q-Amp	Amp_3q26.33	1	1
3q-Amp	Del_3p14.2	1	1
3q-Amp	Del_11q23.1	1	1
3q-Amp	Del_13q14.2	1	1
3q-Amp	Del_14q32.32	1	1
5p-Amp	Amp_5p15.33	1	1
5p-Amp	Amp_5p12	1	1
5p-Amp	Amp_20q11.22	1	1
7p-Amp	7q-Amp	1	1
7p-Amp	Amp_2q31.2	1	1
7p-Amp	Amp_7p11.2	1	1
7p-Amp	Amp_7q21.3	1	1
7p-Amp	Amp_8q24.21	1	1
7q-Amp	Amp_2q31.2	1	1
7q-Amp	Amp_3q26.33	1	1
7q-Amp	Amp_7q21.3	1	1
7q-Amp	Del_4p16.3	1	1
7q-Amp	Del_4p15.2	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	9q-Amp	1	1
8p-Amp	Amp_8p11.23	1	1
8p-Amp	Amp_8q11.21	1	1
8p-Amp	Amp_8q24.21	1	1
8p-Amp	Amp_18p11.31	1	1
8p-Amp	Amp_20q11.22	1	1
8q-Amp	Amp_8p11.23	1	1
8q-Amp	Amp_8q11.21	1	1
8q-Amp	Amp_8q24.21	1	1
8q-Amp	Amp_20q11.22	1	1
9q-Amp	Amp_9p24.1	1	1
9q-Amp	Amp_9p23	1	1
9q-Amp	Amp_9p13.3	1	1
10p-Del	11q-Del	1	1
10p-Del	13q-Del	1	1
10p-Del	21q-Del	1	1
10p-Del	3p-Del	1	1
10p-Del	4p-Del	1	1
10p-Del	8p-Del	1	1
10p-Del	Del_1p36.21	1	1
10p-Del	Del_3p26.2	1	1
10p-Del	Del_3p24.1	1	1
10p-Del	Del_3p14.2	1	1
10p-Del	Del_3p12.1	1	1
10p-Del	Del_4p16.3	1	1
10p-Del	Del_4p15.2	1	1
10p-Del	Del_4q21.3	1	1
10p-Del	Del_5q12.1	1	1
10p-Del	Del_5q15	1	1
10p-Del	Del_8p23.2	1	1
10p-Del	Del_10p15.3	1	1
10p-Del	Del_10p11.21	1	1
10p-Del	Del_10q23.31	1	1
10p-Del	Del_21q22.3	1	1
11p-Del	11q-Del	1	1
11p-Del	13q-Del	1	1
11p-Del	3p-Del	1	1
11p-Del	4p-Del	1	1
11p-Del	4q-Del	1	1
11p-Del	5q-Del	1	1
11p-Del	9p-Del	1	1
11p-Del	Amp_3q26.33	1	1
11p-Del	Amp_11q13.3	1	1
11p-Del	Amp_17q12	1	1
11p-Del	Del_1p36.21	1	1
11p-Del	Del_3p26.2	1	1
11p-Del	Del_3p24.1	1	1
11p-Del	Del_3p14.2	1	1
11p-Del	Del_3p12.1	1	1
11p-Del	Del_4p16.3	1	1
11p-Del	Del_4p15.2	1	1
11p-Del	Del_4q21.3	1	1
11p-Del	Del_4q22.1	1	1
11p-Del	Del_4q35.2	1	1
11p-Del	Del_5q12.1	1	1
11p-Del	Del_5q15	1	1
11p-Del	Del_6p25.3	1	1
11p-Del	Del_7q36.1	1	1
11p-Del	Del_8p23.2	1	1
11p-Del	Del_9p21.3	1	1
11p-Del	Del_9q21.11	1	1
11p-Del	Del_10p11.21	1	1
11p-Del	Del_11p15.5	1	1
11p-Del	Del_11q23.1	1	1
11p-Del	Del_13q12.11	1	1
11p-Del	Del_13q14.2	1	1
11p-Del	Del_14q11.2	1	1
11p-Del	Del_18q23	1	1
11q-Del	13q-Del	1	1
11q-Del	3p-Del	1	1
11q-Del	4p-Del	1	1
11q-Del	8p-Del	1	1
11q-Del	9p-Del	1	1
11q-Del	Amp_3q26.33	1	1
11q-Del	Amp_11q13.3	1	1
11q-Del	Amp_17q12	1	1
11q-Del	Del_3p26.2	1	1
11q-Del	Del_3p24.1	1	1
11q-Del	Del_3p14.2	1	1
11q-Del	Del_3p12.1	1	1
11q-Del	Del_4p16.3	1	1
11q-Del	Del_4p15.2	1	1
11q-Del	Del_7q36.1	1	1
11q-Del	Del_10q23.31	1	1
11q-Del	Del_11p15.5	1	1
11q-Del	Del_11q23.1	1	1
11q-Del	Del_13q12.11	1	1
11q-Del	Del_13q14.2	1	1
11q-Del	Del_14q11.2	1	1
11q-Del	Del_14q32.32	1	1
13q-Del	3p-Del	1	1
13q-Del	4p-Del	1	1
13q-Del	4q-Del	1	1
13q-Del	5q-Del	1	1
13q-Del	9p-Del	1	1
13q-Del	Amp_3q26.33	1	1
13q-Del	Del_1p36.21	1	1
13q-Del	Del_2q36.2	1	1
13q-Del	Del_3p26.2	1	1
13q-Del	Del_3p24.1	1	1
13q-Del	Del_3p14.2	1	1
13q-Del	Del_3p12.1	1	1
13q-Del	Del_4p16.3	1	1
13q-Del	Del_4p15.2	1	1
13q-Del	Del_4q21.3	1	1
13q-Del	Del_4q22.1	1	1
13q-Del	Del_5q12.1	1	1
13q-Del	Del_5q15	1	1
13q-Del	Del_5q35.3	1	1
13q-Del	Del_10p15.3	1	1
13q-Del	Del_10q23.31	1	1
13q-Del	Del_11p15.5	1	1
13q-Del	Del_11q23.1	1	1
13q-Del	Del_13q12.11	1	1
13q-Del	Del_13q14.2	1	1
13q-Del	Del_16q23.1	1	1
13q-Del	Del_16q23.3	1	1
15q-Del	3p-Del	1	1
15q-Del	Del_1p13.2	1	1
15q-Del	Del_2q36.2	1	1
15q-Del	Del_3p26.2	1	1
15q-Del	Del_3p24.1	1	1
15q-Del	Del_3p14.2	1	1
15q-Del	Del_3p12.1	1	1
15q-Del	Del_7q36.1	1	1
15q-Del	Del_13q12.11	1	1
18q-Del	21q-Del	1	1
18q-Del	3p-Del	1	1
18q-Del	3q-Del	1	1
18q-Del	4p-Del	1	1
18q-Del	5q-Del	1	1
18q-Del	8p-Del	1	1
18q-Del	9p-Del	1	1
18q-Del	Del_3p26.2	1	1
18q-Del	Del_3p24.1	1	1
18q-Del	Del_3p14.2	1	1
18q-Del	Del_3p12.1	1	1
18q-Del	Del_5q12.1	1	1
18q-Del	Del_5q15	1	1
18q-Del	Del_5q35.3	1	1
18q-Del	Del_7q31.1	1	1
18q-Del	Del_8p23.2	1	1
18q-Del	Del_9p21.3	1	1
18q-Del	Del_10p11.21	1	1
18q-Del	Del_13q12.11	1	1
18q-Del	Del_13q14.2	1	1
18q-Del	Del_18q23	1	1
18q-Del	Del_21q22.3	1	1
21q-Del	3p-Del	1	1
21q-Del	4p-Del	1	1
21q-Del	4q-Del	1	1
21q-Del	5q-Del	1	1
21q-Del	9p-Del	1	1
21q-Del	Amp_3q26.33	1	1
21q-Del	Del_1p36.21	1	1
21q-Del	Del_1p13.2	1	1
21q-Del	Del_2q36.2	1	1
21q-Del	Del_3p26.2	1	1
21q-Del	Del_3p24.1	1	1
21q-Del	Del_3p14.2	1	1
21q-Del	Del_3p12.1	1	1
21q-Del	Del_4p16.3	1	1
21q-Del	Del_4p15.2	1	1
21q-Del	Del_5q12.1	1	1
21q-Del	Del_5q15	1	1
21q-Del	Del_5q35.3	1	1
21q-Del	Del_8p23.2	1	1
21q-Del	Del_10p11.21	1	1
21q-Del	Del_11p15.5	1	1
21q-Del	Del_14q11.2	1	1
21q-Del	Del_18q23	1	1
21q-Del	Del_21q22.3	1	1
3p-Del	3q-Del	1	1
3p-Del	4p-Del	1	1
3p-Del	4q-Del	1	1
3p-Del	5q-Del	1	1
3p-Del	8p-Del	1	1
3p-Del	9p-Del	1	1
3p-Del	9q-Del	1	1
3p-Del	Amp_3q26.33	1	1
3p-Del	Del_1p36.21	1	1
3p-Del	Del_1p13.2	1	1
3p-Del	Del_2q36.2	1	1
3p-Del	Del_3p26.2	1	1
3p-Del	Del_3p24.1	1	1
3p-Del	Del_3p14.2	1	1
3p-Del	Del_3p12.1	1	1
3p-Del	Del_4p16.3	1	1
3p-Del	Del_4p15.2	1	1
3p-Del	Del_4q21.3	1	1
3p-Del	Del_4q22.1	1	1
3p-Del	Del_4q35.2	1	1
3p-Del	Del_5q12.1	1	1
3p-Del	Del_5q15	1	1
3p-Del	Del_5q35.3	1	1
3p-Del	Del_6p25.3	1	1
3p-Del	Del_7q31.1	1	1
3p-Del	Del_7q36.1	1	1
3p-Del	Del_8p23.2	1	1
3p-Del	Del_9p21.3	1	1
3p-Del	Del_9q21.11	1	1
3p-Del	Del_10p15.3	1	1
3p-Del	Del_10p11.21	1	1
3p-Del	Del_10q23.31	1	1
3p-Del	Del_11p15.5	1	1
3p-Del	Del_11q23.1	1	1
3p-Del	Del_13q12.11	1	1
3p-Del	Del_13q14.2	1	1
3p-Del	Del_14q11.2	1	1
3p-Del	Del_16q23.1	1	1
3p-Del	Del_16q23.3	1	1
3p-Del	Del_18q23	1	1
3p-Del	Del_19p13.3	1	1
3p-Del	Del_21q22.3	1	1
3q-Del	4p-Del	1	1
3q-Del	4q-Del	1	1
3q-Del	9p-Del	1	1
3q-Del	Del_3p26.2	1	1
3q-Del	Del_3p24.1	1	1
3q-Del	Del_3p14.2	1	1
3q-Del	Del_3p12.1	1	1
3q-Del	Del_4p16.3	1	1
3q-Del	Del_4p15.2	1	1
3q-Del	Del_4q21.3	1	1
3q-Del	Del_4q22.1	1	1
3q-Del	Del_4q35.2	1	1
3q-Del	Del_5q12.1	1	1
3q-Del	Del_5q15	1	1
3q-Del	Del_5q35.3	1	1
3q-Del	Del_6p25.3	1	1
3q-Del	Del_7q36.1	1	1
3q-Del	Del_9p21.3	1	1
3q-Del	Del_13q12.11	1	1
4p-Del	4q-Del	1	1
4p-Del	5q-Del	1	1
4p-Del	8p-Del	1	1
4p-Del	9p-Del	1	1
4p-Del	9q-Del	1	1
4p-Del	Amp_3q26.33	1	1
4p-Del	Amp_18p11.31	1	1
4p-Del	Del_1p36.21	1	1
4p-Del	Del_1p13.2	1	1
4p-Del	Del_2q36.2	1	1
4p-Del	Del_3p26.2	1	1
4p-Del	Del_3p24.1	1	1
4p-Del	Del_3p14.2	1	1
4p-Del	Del_3p12.1	1	1
4p-Del	Del_4p16.3	1	1
4p-Del	Del_4p15.2	1	1
4p-Del	Del_4q21.3	1	1
4p-Del	Del_4q22.1	1	1
4p-Del	Del_4q35.2	1	1
4p-Del	Del_5q12.1	1	1
4p-Del	Del_5q15	1	1
4p-Del	Del_5q35.3	1	1
4p-Del	Del_7q36.1	1	1
4p-Del	Del_8p23.2	1	1
4p-Del	Del_9p21.3	1	1
4p-Del	Del_9q21.11	1	1
4p-Del	Del_10p15.3	1	1
4p-Del	Del_10p11.21	1	1
4p-Del	Del_10q23.31	1	1
4p-Del	Del_11p15.5	1	1
4p-Del	Del_11q23.1	1	1
4p-Del	Del_13q12.11	1	1
4p-Del	Del_13q14.2	1	1
4p-Del	Del_14q11.2	1	1
4p-Del	Del_14q32.32	1	1
4p-Del	Del_16q23.1	1	1
4p-Del	Del_16q23.3	1	1
4p-Del	Del_18q23	1	1
4p-Del	Del_21q22.3	1	1
4q-Del	5q-Del	1	1
4q-Del	9p-Del	1	1
4q-Del	9q-Del	1	1
4q-Del	Amp_3q26.33	1	1
4q-Del	Del_1p36.21	1	1
4q-Del	Del_1p13.2	1	1
4q-Del	Del_2q36.2	1	1
4q-Del	Del_3p26.2	1	1
4q-Del	Del_3p24.1	1	1
4q-Del	Del_3p14.2	1	1
4q-Del	Del_3p12.1	1	1
4q-Del	Del_4p16.3	1	1
4q-Del	Del_4p15.2	1	1
4q-Del	Del_4q21.3	1	1
4q-Del	Del_4q22.1	1	1
4q-Del	Del_4q35.2	1	1
4q-Del	Del_5q12.1	1	1
4q-Del	Del_5q15	1	1
4q-Del	Del_5q35.3	1	1
4q-Del	Del_6p25.3	1	1
4q-Del	Del_8p23.2	1	1
4q-Del	Del_9p21.3	1	1
4q-Del	Del_10q23.31	1	1
4q-Del	Del_11p15.5	1	1
4q-Del	Del_13q12.11	1	1
4q-Del	Del_13q14.2	1	1
4q-Del	Del_14q11.2	1	1
4q-Del	Del_16q23.1	1	1
4q-Del	Del_16q23.3	1	1
4q-Del	Del_18q23	1	1
4q-Del	Del_21q22.3	1	1
5q-Del	9p-Del	1	1
5q-Del	9q-Del	1	1
5q-Del	Del_1p36.21	1	1
5q-Del	Del_3p26.2	1	1
5q-Del	Del_3p24.1	1	1
5q-Del	Del_3p14.2	1	1
5q-Del	Del_3p12.1	1	1
5q-Del	Del_4p16.3	1	1
5q-Del	Del_4p15.2	1	1
5q-Del	Del_4q21.3	1	1
5q-Del	Del_5q12.1	1	1
5q-Del	Del_5q15	1	1
5q-Del	Del_5q35.3	1	1
5q-Del	Del_7q36.1	1	1
5q-Del	Del_9p21.3	1	1
5q-Del	Del_9q21.11	1	1
5q-Del	Del_10p11.21	1	1
5q-Del	Del_10q23.31	1	1
5q-Del	Del_11p15.5	1	1
5q-Del	Del_11q23.1	1	1
5q-Del	Del_13q12.11	1	1
5q-Del	Del_13q14.2	1	1
5q-Del	Del_18q23	1	1
5q-Del	Del_21q22.3	1	1
8p-Del	9p-Del	1	1
8p-Del	9q-Del	1	1
8p-Del	Del_1p36.21	1	1
8p-Del	Del_1p13.2	1	1
8p-Del	Del_3p26.2	1	1
8p-Del	Del_3p24.1	1	1
8p-Del	Del_3p14.2	1	1
8p-Del	Del_3p12.1	1	1
8p-Del	Del_4p16.3	1	1
8p-Del	Del_4p15.2	1	1
8p-Del	Del_5q12.1	1	1
8p-Del	Del_5q15	1	1
8p-Del	Del_7q36.1	1	1
8p-Del	Del_8p23.2	1	1
8p-Del	Del_9p21.3	1	1
8p-Del	Del_9q21.11	1	1
8p-Del	Del_10p15.3	1	1
8p-Del	Del_10p11.21	1	1
8p-Del	Del_11q23.1	1	1
8p-Del	Del_18q23	1	1
8p-Del	Del_19p13.3	1	1
9p-Del	9q-Del	1	1
9p-Del	Amp_3q26.33	1	1
9p-Del	Amp_5p15.33	1	1
9p-Del	Amp_18p11.31	1	1
9p-Del	Amp_18q11.2	1	1
9p-Del	Del_1p36.21	1	1
9p-Del	Del_1p13.2	1	1
9p-Del	Del_2q36.2	1	1
9p-Del	Del_3p26.2	1	1
9p-Del	Del_3p24.1	1	1
9p-Del	Del_3p14.2	1	1
9p-Del	Del_3p12.1	1	1
9p-Del	Del_4p16.3	1	1
9p-Del	Del_4p15.2	1	1
9p-Del	Del_4q21.3	1	1
9p-Del	Del_4q22.1	1	1
9p-Del	Del_4q35.2	1	1
9p-Del	Del_5q12.1	1	1
9p-Del	Del_5q15	1	1
9p-Del	Del_5q35.3	1	1
9p-Del	Del_7q31.1	1	1
9p-Del	Del_7q36.1	1	1
9p-Del	Del_8p23.2	1	1
9p-Del	Del_9p21.3	1	1
9p-Del	Del_9q21.11	1	1
9p-Del	Del_10p11.21	1	1
9p-Del	Del_10q23.31	1	1
9p-Del	Del_11p15.5	1	1
9p-Del	Del_11q23.1	1	1
9p-Del	Del_13q12.11	1	1
9p-Del	Del_13q14.2	1	1
9p-Del	Del_14q11.2	1	1
9p-Del	Del_18q23	1	1
9p-Del	Del_21q22.3	1	1
9q-Del	Del_3p26.2	1	1
9q-Del	Del_3p24.1	1	1
9q-Del	Del_3p14.2	1	1
9q-Del	Del_3p12.1	1	1
9q-Del	Del_4p16.3	1	1
9q-Del	Del_4p15.2	1	1
9q-Del	Del_4q21.3	1	1
9q-Del	Del_4q22.1	1	1
9q-Del	Del_4q35.2	1	1
9q-Del	Del_5q12.1	1	1
9q-Del	Del_5q15	1	1
9q-Del	Del_5q35.3	1	1
9q-Del	Del_8p23.2	1	1
9q-Del	Del_9p21.3	1	1
9q-Del	Del_9q21.11	1	1
9q-Del	Del_11p15.5	1	1
9q-Del	Del_13q12.11	1	1
9q-Del	Del_18q23	1	1
9q-Del	Del_21q22.3	1	1
Xp-Del	Amp_2q11.2	1	1
Xp-Del	Amp_Xq28	1	1
Xp-Del	Del_3p12.1	1	1
Xp-Del	Del_Xp22.2	1	1
Xp-Del	Del_Xp21.3	1	1
Amp_2q11.2	Amp_6q12	1	1
Amp_2q11.2	Del_1p13.2	1	1
Amp_2q11.2	Del_3p12.1	1	1
Amp_2q31.2	Amp_3q26.33	1	1
Amp_2q31.2	Amp_5p15.33	1	1
Amp_2q31.2	Amp_7p11.2	1	1
Amp_2q31.2	Del_2q36.2	1	1
Amp_2q31.2	Del_11p15.5	1	1
Amp_3q26.33	Amp_5p15.33	1	1
Amp_3q26.33	Amp_12p13.33	1	1
Amp_3q26.33	Amp_17q12	1	1
Amp_3q26.33	Del_1p36.21	1	1
Amp_3q26.33	Del_1p13.2	1	1
Amp_3q26.33	Del_2q22.1	1	1
Amp_3q26.33	Del_2q36.2	1	1
Amp_3q26.33	Del_3p26.2	1	1
Amp_3q26.33	Del_3p24.1	1	1
Amp_3q26.33	Del_3p14.2	1	1
Amp_3q26.33	Del_3p12.1	1	1
Amp_3q26.33	Del_4p16.3	1	1
Amp_3q26.33	Del_4p15.2	1	1
Amp_3q26.33	Del_4q21.3	1	1
Amp_3q26.33	Del_4q22.1	1	1
Amp_3q26.33	Del_5q12.1	1	1
Amp_3q26.33	Del_5q15	1	1
Amp_3q26.33	Del_5q35.3	1	1
Amp_3q26.33	Del_10p15.3	1	1
Amp_3q26.33	Del_10p11.21	1	1
Amp_3q26.33	Del_11p15.5	1	1
Amp_3q26.33	Del_11q23.1	1	1
Amp_3q26.33	Del_13q12.11	1	1
Amp_3q26.33	Del_13q14.2	1	1
Amp_3q26.33	Del_16q23.1	1	1
Amp_3q26.33	Del_18q23	1	1
Amp_3q26.33	Del_19p13.3	1	1
Amp_5p15.33	Amp_5p12	1	1
Amp_5p15.33	Amp_8q24.21	1	1
Amp_5p15.33	Amp_20q11.22	1	1
Amp_5p15.33	Del_7q36.1	1	1
Amp_5p12	Amp_20q11.22	1	1
Amp_5p12	Del_Xq21.33	1	1
Amp_6p12.1	Amp_6q12	1	1
Amp_6p12.1	Amp_18p11.31	1	1
Amp_6q12	Del_14q11.2	1	1
Amp_7p11.2	Amp_8q24.21	1	1
Amp_7q21.3	Amp_11q13.3	1	1
Amp_8p11.23	Amp_8q11.21	1	1
Amp_8p11.23	Amp_8q24.21	1	1
Amp_8p11.23	Amp_20q11.22	1	1
Amp_8q11.21	Amp_8q24.21	1	1
Amp_8q11.21	Amp_9p13.3	1	1
Amp_8q11.21	Amp_18p11.31	1	1
Amp_8q11.21	Amp_20q11.22	1	1
Amp_8q24.21	Amp_11q13.3	1	1
Amp_8q24.21	Del_3p26.2	1	1
Amp_9p24.1	Amp_9p23	1	1
Amp_9p24.1	Amp_9p13.3	1	1
Amp_9p23	Amp_9p13.3	1	1
Amp_11p13	Del_Xq21.33	1	1
Amp_11q13.3	Del_9p21.3	1	1
Amp_11q13.3	Del_11q23.1	1	1
Amp_12p13.33	Amp_12q15	1	1
Amp_13q34	Amp_17q12	1	1
Amp_15q26.3	Del_1p36.21	1	1
Amp_15q26.3	Del_8p23.2	1	1
Amp_17q12	Del_2q36.2	1	1
Amp_18p11.31	Amp_18q11.2	1	1
Amp_18p11.31	Amp_Xq28	1	1
Amp_18p11.31	Del_3p24.1	1	1
Amp_18p11.31	Del_3p14.2	1	1
Amp_18p11.31	Del_4p16.3	1	1
Amp_18p11.31	Del_4p15.2	1	1
Amp_18p11.31	Del_18q23	1	1
Amp_18q11.2	Del_3p24.1	1	1
Amp_Xq28	Del_Xp21.3	1	1
Del_1p36.21	Del_1p13.2	1	1
Del_1p36.21	Del_2q36.2	1	1
Del_1p36.21	Del_3p26.2	1	1
Del_1p36.21	Del_3p24.1	1	1
Del_1p36.21	Del_3p14.2	1	1
Del_1p36.21	Del_3p12.1	1	1
Del_1p36.21	Del_4p16.3	1	1
Del_1p36.21	Del_4p15.2	1	1
Del_1p36.21	Del_4q21.3	1	1
Del_1p36.21	Del_4q22.1	1	1
Del_1p36.21	Del_4q35.2	1	1
Del_1p36.21	Del_5q12.1	1	1
Del_1p36.21	Del_5q15	1	1
Del_1p36.21	Del_5q35.3	1	1
Del_1p36.21	Del_6p25.3	1	1
Del_1p36.21	Del_10p11.21	1	1
Del_1p36.21	Del_10q23.31	1	1
Del_1p36.21	Del_11p15.5	1	1
Del_1p36.21	Del_13q12.11	1	1
Del_1p36.21	Del_13q14.2	1	1
Del_1p36.21	Del_14q11.2	1	1
Del_1p36.21	Del_16q23.3	1	1
Del_1p36.21	Del_17q25.3	1	1
Del_1p36.21	Del_18q23	1	1
Del_1p36.21	Del_21q22.3	1	1
Del_1p13.2	Del_2q36.2	1	1
Del_1p13.2	Del_3p26.2	1	1
Del_1p13.2	Del_3p24.1	1	1
Del_1p13.2	Del_3p14.2	1	1
Del_1p13.2	Del_3p12.1	1	1
Del_1p13.2	Del_4p16.3	1	1
Del_1p13.2	Del_4p15.2	1	1
Del_1p13.2	Del_4q21.3	1	1
Del_1p13.2	Del_4q35.2	1	1
Del_1p13.2	Del_5q12.1	1	1
Del_1p13.2	Del_5q15	1	1
Del_1p13.2	Del_5q35.3	1	1
Del_1p13.2	Del_7q36.1	1	1
Del_1p13.2	Del_8p23.2	1	1
Del_1p13.2	Del_18q23	1	1
Del_1p13.2	Del_21q22.3	1	1
Del_1q44	Del_7q31.1	1	1
Del_1q44	Del_9p21.3	1	1
Del_2q21.2	Del_2q22.1	1	1
Del_2q36.2	Del_3p26.2	1	1
Del_2q36.2	Del_3p24.1	1	1
Del_2q36.2	Del_3p14.2	1	1
Del_2q36.2	Del_3p12.1	1	1
Del_2q36.2	Del_4p16.3	1	1
Del_2q36.2	Del_4p15.2	1	1
Del_2q36.2	Del_4q21.3	1	1
Del_2q36.2	Del_4q22.1	1	1
Del_2q36.2	Del_5q12.1	1	1
Del_2q36.2	Del_5q15	1	1
Del_2q36.2	Del_5q35.3	1	1
Del_2q36.2	Del_10q23.31	1	1
Del_2q36.2	Del_11p15.5	1	1
Del_2q36.2	Del_13q12.11	1	1
Del_2q36.2	Del_13q14.2	1	1
Del_2q36.2	Del_16q23.1	1	1
Del_2q36.2	Del_21q22.3	1	1
Del_3p26.2	Del_3p24.1	1	1
Del_3p26.2	Del_3p14.2	1	1
Del_3p26.2	Del_3p12.1	1	1
Del_3p26.2	Del_4p16.3	1	1
Del_3p26.2	Del_4p15.2	1	1
Del_3p26.2	Del_4q21.3	1	1
Del_3p26.2	Del_4q22.1	1	1
Del_3p26.2	Del_4q35.2	1	1
Del_3p26.2	Del_5q12.1	1	1
Del_3p26.2	Del_5q15	1	1
Del_3p26.2	Del_5q35.3	1	1
Del_3p26.2	Del_6p25.3	1	1
Del_3p26.2	Del_7q31.1	1	1
Del_3p26.2	Del_7q36.1	1	1
Del_3p26.2	Del_8p23.2	1	1
Del_3p26.2	Del_9p21.3	1	1
Del_3p26.2	Del_9q21.11	1	1
Del_3p26.2	Del_10p15.3	1	1
Del_3p26.2	Del_10p11.21	1	1
Del_3p26.2	Del_10q23.31	1	1
Del_3p26.2	Del_11p15.5	1	1
Del_3p26.2	Del_11q23.1	1	1
Del_3p26.2	Del_13q12.11	1	1
Del_3p26.2	Del_13q14.2	1	1
Del_3p26.2	Del_14q11.2	1	1
Del_3p26.2	Del_16q23.1	1	1
Del_3p26.2	Del_16q23.3	1	1
Del_3p26.2	Del_18q23	1	1
Del_3p26.2	Del_19p13.3	1	1
Del_3p26.2	Del_21q22.3	1	1
Del_3p24.1	Del_3p14.2	1	1
Del_3p24.1	Del_3p12.1	1	1
Del_3p24.1	Del_4p16.3	1	1
Del_3p24.1	Del_4p15.2	1	1
Del_3p24.1	Del_4q21.3	1	1
Del_3p24.1	Del_4q22.1	1	1
Del_3p24.1	Del_4q35.2	1	1
Del_3p24.1	Del_5q12.1	1	1
Del_3p24.1	Del_5q15	1	1
Del_3p24.1	Del_5q35.3	1	1
Del_3p24.1	Del_6p25.3	1	1
Del_3p24.1	Del_7q31.1	1	1
Del_3p24.1	Del_7q36.1	1	1
Del_3p24.1	Del_8p23.2	1	1
Del_3p24.1	Del_9p21.3	1	1
Del_3p24.1	Del_9q21.11	1	1
Del_3p24.1	Del_10p15.3	1	1
Del_3p24.1	Del_10p11.21	1	1
Del_3p24.1	Del_10q23.31	1	1
Del_3p24.1	Del_11p15.5	1	1
Del_3p24.1	Del_11q23.1	1	1
Del_3p24.1	Del_13q12.11	1	1
Del_3p24.1	Del_13q14.2	1	1
Del_3p24.1	Del_14q11.2	1	1
Del_3p24.1	Del_16q23.1	1	1
Del_3p24.1	Del_16q23.3	1	1
Del_3p24.1	Del_18q23	1	1
Del_3p24.1	Del_19p13.3	1	1
Del_3p24.1	Del_21q22.3	1	1
Del_3p14.2	Del_3p12.1	1	1
Del_3p14.2	Del_4p16.3	1	1
Del_3p14.2	Del_4p15.2	1	1
Del_3p14.2	Del_4q21.3	1	1
Del_3p14.2	Del_4q22.1	1	1
Del_3p14.2	Del_4q35.2	1	1
Del_3p14.2	Del_5q12.1	1	1
Del_3p14.2	Del_5q15	1	1
Del_3p14.2	Del_5q35.3	1	1
Del_3p14.2	Del_6p25.3	1	1
Del_3p14.2	Del_7q31.1	1	1
Del_3p14.2	Del_7q36.1	1	1
Del_3p14.2	Del_8p23.2	1	1
Del_3p14.2	Del_9p21.3	1	1
Del_3p14.2	Del_9q21.11	1	1
Del_3p14.2	Del_10p15.3	1	1
Del_3p14.2	Del_10p11.21	1	1
Del_3p14.2	Del_10q23.31	1	1
Del_3p14.2	Del_11p15.5	1	1
Del_3p14.2	Del_11q23.1	1	1
Del_3p14.2	Del_13q12.11	1	1
Del_3p14.2	Del_13q14.2	1	1
Del_3p14.2	Del_14q11.2	1	1
Del_3p14.2	Del_16q23.1	1	1
Del_3p14.2	Del_16q23.3	1	1
Del_3p14.2	Del_18q23	1	1
Del_3p14.2	Del_19p13.3	1	1
Del_3p14.2	Del_21q22.3	1	1
Del_3p12.1	Del_4p16.3	1	1
Del_3p12.1	Del_4p15.2	1	1
Del_3p12.1	Del_4q21.3	1	1
Del_3p12.1	Del_4q22.1	1	1
Del_3p12.1	Del_4q35.2	1	1
Del_3p12.1	Del_5q12.1	1	1
Del_3p12.1	Del_5q15	1	1
Del_3p12.1	Del_5q35.3	1	1
Del_3p12.1	Del_6p25.3	1	1
Del_3p12.1	Del_7q31.1	1	1
Del_3p12.1	Del_7q36.1	1	1
Del_3p12.1	Del_8p23.2	1	1
Del_3p12.1	Del_9p21.3	1	1
Del_3p12.1	Del_9q21.11	1	1
Del_3p12.1	Del_10p15.3	1	1
Del_3p12.1	Del_10p11.21	1	1
Del_3p12.1	Del_10q23.31	1	1
Del_3p12.1	Del_11p15.5	1	1
Del_3p12.1	Del_11q23.1	1	1
Del_3p12.1	Del_13q12.11	1	1
Del_3p12.1	Del_13q14.2	1	1
Del_3p12.1	Del_14q11.2	1	1
Del_3p12.1	Del_16q23.1	1	1
Del_3p12.1	Del_16q23.3	1	1
Del_3p12.1	Del_18q23	1	1
Del_3p12.1	Del_19p13.3	1	1
Del_3p12.1	Del_21q22.3	1	1
Del_3p12.1	Del_Xp22.2	1	1
Del_4p16.3	Del_4p15.2	1	1
Del_4p16.3	Del_4q21.3	1	1
Del_4p16.3	Del_4q22.1	1	1
Del_4p16.3	Del_4q35.2	1	1
Del_4p16.3	Del_5q12.1	1	1
Del_4p16.3	Del_5q15	1	1
Del_4p16.3	Del_5q35.3	1	1
Del_4p16.3	Del_6p25.3	1	1
Del_4p16.3	Del_7q31.1	1	1
Del_4p16.3	Del_7q36.1	1	1
Del_4p16.3	Del_8p23.2	1	1
Del_4p16.3	Del_9p21.3	1	1
Del_4p16.3	Del_9q21.11	1	1
Del_4p16.3	Del_10p15.3	1	1
Del_4p16.3	Del_10p11.21	1	1
Del_4p16.3	Del_11p15.5	1	1
Del_4p16.3	Del_11q23.1	1	1
Del_4p16.3	Del_13q12.11	1	1
Del_4p16.3	Del_13q14.2	1	1
Del_4p16.3	Del_14q11.2	1	1
Del_4p16.3	Del_16q23.1	1	1
Del_4p16.3	Del_18q23	1	1
Del_4p16.3	Del_21q22.3	1	1
Del_4p15.2	Del_4q21.3	1	1
Del_4p15.2	Del_4q22.1	1	1
Del_4p15.2	Del_4q35.2	1	1
Del_4p15.2	Del_5q12.1	1	1
Del_4p15.2	Del_5q15	1	1
Del_4p15.2	Del_5q35.3	1	1
Del_4p15.2	Del_6p25.3	1	1
Del_4p15.2	Del_7q31.1	1	1
Del_4p15.2	Del_7q36.1	1	1
Del_4p15.2	Del_8p23.2	1	1
Del_4p15.2	Del_9p21.3	1	1
Del_4p15.2	Del_9q21.11	1	1
Del_4p15.2	Del_10p15.3	1	1
Del_4p15.2	Del_10p11.21	1	1
Del_4p15.2	Del_10q23.31	1	1
Del_4p15.2	Del_11p15.5	1	1
Del_4p15.2	Del_11q23.1	1	1
Del_4p15.2	Del_13q12.11	1	1
Del_4p15.2	Del_13q14.2	1	1
Del_4p15.2	Del_14q11.2	1	1
Del_4p15.2	Del_14q32.32	1	1
Del_4p15.2	Del_16q23.1	1	1
Del_4p15.2	Del_16q23.3	1	1
Del_4p15.2	Del_17q25.3	1	1
Del_4p15.2	Del_18q23	1	1
Del_4p15.2	Del_21q22.3	1	1
Del_4q21.3	Del_4q22.1	1	1
Del_4q21.3	Del_4q35.2	1	1
Del_4q21.3	Del_5q12.1	1	1
Del_4q21.3	Del_5q15	1	1
Del_4q21.3	Del_5q35.3	1	1
Del_4q21.3	Del_6p25.3	1	1
Del_4q21.3	Del_9p21.3	1	1
Del_4q21.3	Del_10q23.31	1	1
Del_4q21.3	Del_11p15.5	1	1
Del_4q21.3	Del_13q12.11	1	1
Del_4q21.3	Del_13q14.2	1	1
Del_4q21.3	Del_14q11.2	1	1
Del_4q21.3	Del_16q23.1	1	1
Del_4q21.3	Del_16q23.3	1	1
Del_4q21.3	Del_21q22.3	1	1
Del_4q22.1	Del_4q35.2	1	1
Del_4q22.1	Del_5q12.1	1	1
Del_4q22.1	Del_5q15	1	1
Del_4q22.1	Del_6p25.3	1	1
Del_4q22.1	Del_8p23.2	1	1
Del_4q22.1	Del_9p21.3	1	1
Del_4q22.1	Del_10q23.31	1	1
Del_4q22.1	Del_11p15.5	1	1
Del_4q22.1	Del_11q23.1	1	1
Del_4q22.1	Del_13q12.11	1	1
Del_4q22.1	Del_13q14.2	1	1
Del_4q22.1	Del_14q11.2	1	1
Del_4q22.1	Del_16q23.1	1	1
Del_4q22.1	Del_16q23.3	1	1
Del_4q35.2	Del_5q15	1	1
Del_4q35.2	Del_5q35.3	1	1
Del_4q35.2	Del_8p23.2	1	1
Del_4q35.2	Del_10p11.21	1	1
Del_4q35.2	Del_10q23.31	1	1
Del_4q35.2	Del_13q12.11	1	1
Del_4q35.2	Del_18q23	1	1
Del_4q35.2	Del_21q22.3	1	1
Del_5q12.1	Del_5q15	1	1
Del_5q12.1	Del_5q35.3	1	1
Del_5q12.1	Del_7q31.1	1	1
Del_5q12.1	Del_7q36.1	1	1
Del_5q12.1	Del_8p23.2	1	1
Del_5q12.1	Del_9p21.3	1	1
Del_5q12.1	Del_9q21.11	1	1
Del_5q12.1	Del_10p15.3	1	1
Del_5q12.1	Del_10p11.21	1	1
Del_5q12.1	Del_10q23.31	1	1
Del_5q12.1	Del_11p15.5	1	1
Del_5q12.1	Del_11q23.1	1	1
Del_5q12.1	Del_13q12.11	1	1
Del_5q12.1	Del_13q14.2	1	1
Del_5q12.1	Del_14q11.2	1	1
Del_5q12.1	Del_18q23	1	1
Del_5q12.1	Del_21q22.3	1	1
Del_5q15	Del_5q35.3	1	1
Del_5q15	Del_7q31.1	1	1
Del_5q15	Del_7q36.1	1	1
Del_5q15	Del_8p23.2	1	1
Del_5q15	Del_9p21.3	1	1
Del_5q15	Del_9q21.11	1	1
Del_5q15	Del_10p15.3	1	1
Del_5q15	Del_10p11.21	1	1
Del_5q15	Del_10q23.31	1	1
Del_5q15	Del_11p15.5	1	1
Del_5q15	Del_11q23.1	1	1
Del_5q15	Del_13q12.11	1	1
Del_5q15	Del_13q14.2	1	1
Del_5q15	Del_14q11.2	1	1
Del_5q15	Del_16q23.1	1	1
Del_5q15	Del_18q23	1	1
Del_5q15	Del_21q22.3	1	1
Del_5q35.3	Del_7q31.1	1	1
Del_5q35.3	Del_7q36.1	1	1
Del_5q35.3	Del_8p23.2	1	1
Del_5q35.3	Del_9p21.3	1	1
Del_5q35.3	Del_9q21.11	1	1
Del_5q35.3	Del_10p11.21	1	1
Del_5q35.3	Del_10q23.31	1	1
Del_5q35.3	Del_11p15.5	1	1
Del_5q35.3	Del_13q12.11	1	1
Del_5q35.3	Del_13q14.2	1	1
Del_5q35.3	Del_14q11.2	1	1
Del_5q35.3	Del_18q23	1	1
Del_5q35.3	Del_21q22.3	1	1
Del_6p25.3	Del_8p23.2	1	1
Del_6p25.3	Del_11p15.5	1	1
Del_6p25.3	Del_13q12.11	1	1
Del_6p25.3	Del_16q23.1	1	1
Del_6p25.3	Del_16q23.3	1	1
Del_7q31.1	Del_7q36.1	1	1
Del_7q31.1	Del_9p21.3	1	1
Del_7q36.1	Del_9p21.3	1	1
Del_7q36.1	Del_9q21.11	1	1
Del_7q36.1	Del_10p11.21	1	1
Del_7q36.1	Del_11p15.5	1	1
Del_7q36.1	Del_11q23.1	1	1
Del_7q36.1	Del_13q12.11	1	1
Del_7q36.1	Del_13q14.2	1	1
Del_7q36.1	Del_14q11.2	1	1
Del_7q36.1	Del_18q23	1	1
Del_8p23.2	Del_9p21.3	1	1
Del_8p23.2	Del_9q21.11	1	1
Del_8p23.2	Del_10p15.3	1	1
Del_8p23.2	Del_10p11.21	1	1
Del_8p23.2	Del_11p15.5	1	1
Del_8p23.2	Del_13q12.11	1	1
Del_8p23.2	Del_18q23	1	1
Del_8p23.2	Del_19p13.3	1	1
Del_8p23.2	Del_21q22.3	1	1
Del_9p21.3	Del_9q21.11	1	1
Del_9p21.3	Del_10p11.21	1	1
Del_9p21.3	Del_11p15.5	1	1
Del_9p21.3	Del_13q12.11	1	1
Del_9p21.3	Del_14q11.2	1	1
Del_9p21.3	Del_18q23	1	1
Del_9p21.3	Del_21q22.3	1	1
Del_9p21.3	Del_Xp21.3	1	1
Del_9q21.11	Del_10p11.21	1	1
Del_9q21.11	Del_10q23.31	1	1
Del_9q21.11	Del_11p15.5	1	1
Del_9q21.11	Del_13q12.11	1	1
Del_9q21.11	Del_14q11.2	1	1
Del_9q21.11	Del_18q23	1	1
Del_10p15.3	Del_10p11.21	1	1
Del_10p15.3	Del_10q23.31	1	1
Del_10p15.3	Del_11q23.1	1	1
Del_10p11.21	Del_10q23.31	1	1
Del_10p11.21	Del_11p15.5	1	1
Del_10p11.21	Del_13q12.11	1	1
Del_10p11.21	Del_18q23	1	1
Del_10p11.21	Del_21q22.3	1	1
Del_10q23.31	Del_11q23.1	1	1
Del_10q23.31	Del_13q12.11	1	1
Del_10q23.31	Del_13q14.2	1	1
Del_10q23.31	Del_16q23.1	1	1
Del_10q23.31	Del_16q23.3	1	1
Del_11p15.5	Del_11q23.1	1	1
Del_11p15.5	Del_13q12.11	1	1
Del_11p15.5	Del_13q14.2	1	1
Del_11p15.5	Del_14q11.2	1	1
Del_11p15.5	Del_17q25.3	1	1
Del_11p15.5	Del_18q23	1	1
Del_11q23.1	Del_13q12.11	1	1
Del_11q23.1	Del_13q14.2	1	1
Del_11q23.1	Del_14q11.2	1	1
Del_11q23.1	Del_14q32.32	1	1
Del_11q23.1	Del_16q23.1	1	1
Del_11q23.1	Del_16q23.3	1	1
Del_11q23.1	Del_18q23	1	1
Del_11q23.1	Del_19p13.3	1	1
Del_13q12.11	Del_13q14.2	1	1
Del_13q12.11	Del_14q11.2	1	1
Del_13q12.11	Del_16q23.1	1	1
Del_13q12.11	Del_16q23.3	1	1
Del_13q12.11	Del_18q23	1	1
Del_13q12.11	Del_21q22.3	1	1
Del_13q14.2	Del_14q32.32	1	1
Del_13q14.2	Del_16q23.1	1	1
Del_13q14.2	Del_16q23.3	1	1
Del_13q14.2	Del_17q25.3	1	1
Del_14q11.2	Del_14q32.32	1	1
Del_14q11.2	Del_16q23.1	1	1
Del_14q11.2	Del_16q23.3	1	1
Del_14q11.2	Del_18q23	1	1
Del_14q32.32	Del_16q23.1	1	1
Del_14q32.32	Del_16q23.3	1	1
Del_16q23.1	Del_16q23.3	1	1
Del_18q23	Del_21q22.3	1	1
Del_Xp22.2	Del_Xp21.3	1	1
CDKN2A	Del_9p21.3	1.19e-10	1
HRAS	TP53	1.57e-06	1
CASP8	Del_18q23	1.99e-05	1
CASP8	Amp_3q26.33	2.55e-07	1
CASP8	Amp_11q13.3	4e-06	1
TP53	Del_14q32.32	6.03e-05	1
HUWE1	Amp_11q13.3	6.18e-05	1
TP53	Del_11q23.1	7.33e-05	1
HRAS	Del_3p14.2	7.54e-05	1
HRAS	Del_3p12.1	9.69e-05	1
