[1] "started"
[1] "R version 2.15.3 (2013-03-01)"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/analysis.results.RData"
[1] "CLI_CNVFOCAL"
[1] "/xchip/tcga/Tools/Nozzle/v1.current"
[1] "Nozzle.R1"
                           V1.D                              V2 
                "Time to Death"                "YEARS_TO_BIRTH" 
                             V3                              V4 
             "PATHOLOGIC_STAGE"             "PATHOLOGY_T_STAGE" 
                             V5                              V6 
            "PATHOLOGY_N_STAGE"             "PATHOLOGY_M_STAGE" 
                             V7                              V8 
                       "GENDER"             "RADIATION_THERAPY" 
                             V9                             V10 
  "KARNOFSKY_PERFORMANCE_SCORE"             "HISTOLOGICAL_TYPE" 
                            V11                             V12 
     "NUMBER_PACK_YEARS_SMOKED" "YEAR_OF_TOBACCO_SMOKING_ONSET" 
                            V13                             V14 
                         "RACE"                     "ETHNICITY" 
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D1V1.png"
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D1V14.png"
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D2V3.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D2V4.png"
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D2V6.png"
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D2V7.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D2V8.png"
[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V2.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V3.png"
[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V4.png"
[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V5.png"
[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V6.png"
[1] TRUE
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V8.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V9.png"
[1] FALSE
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[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V11.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V12.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V13.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D3V14.png"
[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V5.png"
[1] TRUE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V6.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V7.png"
[1] FALSE
[1] "symlink"
[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V8.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V9.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V10.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V11.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V12.png"
[1] FALSE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V13.png"
[1] TRUE
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[1] "/xchip/cga/gdac-prod/tcga-gdac/jobResults/GDAC_Correlate_Genomic_Events/KIPAN-TP/22533803/D4V14.png"
[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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[1] TRUE
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[1] TRUE
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[1] FALSE
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