gene1	gene2	pval	qval
FLT3	Del_5q31.2	0.00339	1
FLT3	TP53	0.00685	1
FLT3	Amp_21q22.2	0.0193	1
IDH2	NPM1	0.0245	1
NPM1	Del_5q31.2	0.037	1
FLT3	RUNX1	0.0372	1
NPM1	RUNX1	0.0454	1
NPM1	Amp_11q23.3	0.0454	1
NPM1	TP53	0.0556	1
FLT3	7q-Del	0.0658	1
FLT3	IDH2	0.0664	1
DNMT3A	RUNX1	0.0672	1
NPM1	7q-Del	0.068	1
FLT3	KRAS	0.0746	1
FLT3	Del_12p13.2	0.0746	1
FLT3	Del_17q11.2	0.0746	1
NPM1	Amp_21q22.2	0.101	1
NPM1	Del_7p12.1	0.101	1
FLT3	21q-Amp	0.104	1
FLT3	17p-Del	0.104	1
DNMT3A	Del_12p13.2	0.107	1
DNMT3A	Del_18p11.21	0.107	1
FLT3	Del_7p12.1	0.114	1
NPM1	7p-Del	0.123	1
DNMT3A	21q-Amp	0.142	1
IDH2	Del_5q31.2	0.143	1
FLT3	U2AF1	0.145	1
FLT3	5q-Del	0.145	1
DNMT3A	Del_7q32.3	0.146	1
FLT3	7p-Del	0.148	1
NPM1	Del_7q32.3	0.154	1
IDH2	TET2	0.161	1
DNMT3A	Del_7p12.1	0.17	1
FLT3	NRAS	0.171	1
DNMT3A	Del_5q31.2	0.177	1
IDH1	Del_5q31.2	0.178	1
NPM1	8q-Amp	0.179	1
RUNX1	Del_7q32.3	0.179	1
IDH2	NRAS	0.182	1
IDH2	TP53	0.182	1
DNMT3A	STAG2	0.189	1
RUNX1	Del_5q31.2	0.198	1
ASXL1	FLT3	0.201	1
FLT3	22q-Amp	0.201	1
NPM1	8p-Amp	0.208	1
DNMT3A	7p-Del	0.212	1
IDH1	TP53	0.22	1
NPM1	Del_12p13.2	0.221	1
NPM1	Del_17q11.2	0.221	1
NPM1	Del_18p11.21	0.221	1
FLT3	Del_7q32.3	0.224	1
RUNX1	TP53	0.241	1
DNMT3A	TP53	0.256	1
RUNX1	7q-Del	0.266	1
NPM1	11q-Amp	0.268	1
NPM1	21q-Amp	0.268	1
NPM1	17p-Del	0.268	1
FLT3	IDH1	0.269	1
FLT3	8q-Amp	0.269	1
WT1	Del_5q31.2	0.301	1
DNMT3A	7q-Del	0.304	1
FLT3	Del_18p11.21	0.31	1
CEBPA	FLT3	0.319	1
FLT3	8p-Amp	0.32	1
FLT3	Amp_11q23.3	0.32	1
CEBPA	RUNX1	0.324	1
CEBPA	Amp_11q23.3	0.324	1
RUNX1	Del_7p12.1	0.324	1
TET2	WT1	0.324	1
Amp_11q23.3	Amp_21q22.2	0.324	1
NPM1	U2AF1	0.325	1
NPM1	5q-Del	0.325	1
NPM1	Amp_1p33	0.325	1
NPM1	Del_16q23.1	0.325	1
TP53	WT1	0.349	1
RUNX1	7p-Del	0.357	1
EZH2	FLT3	0.384	1
FLT3	KIT	0.388	1
FLT3	11q-Amp	0.388	1
DNMT3A	Del_17q11.2	0.39	1
ASXL1	NPM1	0.393	1
NPM1	22q-Amp	0.393	1
IDH2	PTPN11	0.411	1
IDH2	Del_12p13.2	0.411	1
IDH2	Del_17q11.2	0.411	1
IDH2	Del_18p11.21	0.411	1
DNMT3A	WT1	0.419	1
IDH2	Del_7q32.3	0.42	1
CEBPA	Amp_21q22.2	0.434	1
WT1	Amp_21q22.2	0.434	1
Amp_21q22.2	Del_7p12.1	0.434	1
IDH1	KRAS	0.453	1
IDH1	Del_12p13.2	0.453	1
IDH1	Del_17q11.2	0.453	1
IDH1	Del_18p11.21	0.453	1
KRAS	Del_5q31.2	0.453	1
PTPN11	8q-Amp	0.453	1
IDH1	IDH2	0.454	1
IDH2	KIT	0.46	1
IDH2	SMC3	0.46	1
IDH2	11q-Amp	0.46	1
IDH2	17p-Del	0.46	1
7p-Del	Amp_21q22.2	0.466	1
DNMT3A	KIT	0.469	1
DNMT3A	17p-Del	0.469	1
NPM1	TET2	0.472	1
KRAS	Amp_11q23.3	0.476	1
PTPN11	RUNX1	0.476	1
PTPN11	TET2	0.476	1
PTPN11	8p-Amp	0.476	1
RUNX1	Del_18p11.21	0.476	1
TET2	Del_12p13.2	0.476	1
TET2	Del_18p11.21	0.476	1
SMC3	Del_7q32.3	0.48	1
FLT3	PHF6	0.481	1
FLT3	Amp_1p33	0.481	1
FLT3	Del_16q23.1	0.481	1
KRAS	NRAS	0.499	1
KRAS	TP53	0.499	1
NRAS	Del_18p11.21	0.499	1
IDH1	SMC3	0.501	1
IDH1	11q-Amp	0.501	1
IDH1	17p-Del	0.501	1
KIT	8q-Amp	0.501	1
DNMT3A	IDH2	0.506	1
IDH2	SMC1A	0.515	1
IDH2	5q-Del	0.515	1
IDH2	Del_16q23.1	0.515	1
KIT	RUNX1	0.523	1
KIT	8p-Amp	0.523	1
KIT	Amp_11q23.3	0.523	1
RUNX1	11q-Amp	0.523	1
RUNX1	17p-Del	0.523	1
SMC3	Amp_11q23.3	0.523	1
21q-Amp	Amp_11q23.3	0.523	1
FLT3	GIGYF2	0.529	1
PHF6	Del_7q32.3	0.534	1
SMC1A	Del_7q32.3	0.534	1
STAG2	Del_7q32.3	0.534	1
KIT	NRAS	0.546	1
KIT	TP53	0.546	1
NRAS	21q-Amp	0.546	1
IDH1	RUNX1	0.551	1
IDH1	Amp_11q23.3	0.551	1
RUNX1	8q-Amp	0.551	1
TET2	8q-Amp	0.551	1
TET2	Del_5q31.2	0.551	1
IDH1	PHF6	0.554	1
IDH1	STAG2	0.554	1
IDH1	5q-Del	0.554	1
IDH1	Del_16q23.1	0.554	1
PHF6	Del_5q31.2	0.554	1
SMC1A	Del_5q31.2	0.554	1
STAG2	Del_5q31.2	0.554	1
U2AF1	Del_5q31.2	0.554	1
DNMT3A	PHF6	0.559	1
DNMT3A	5q-Del	0.559	1
DNMT3A	Del_16q23.1	0.559	1
IDH2	7q-Del	0.563	1
KIT	7q-Del	0.569	1
SMC3	7q-Del	0.569	1
EZH2	NPM1	0.573	1
PHF6	TET2	0.575	1
PHF6	Amp_11q23.3	0.575	1
RUNX1	SMC1A	0.575	1
RUNX1	5q-Del	0.575	1
RUNX1	Amp_1p33	0.575	1
RUNX1	Del_16q23.1	0.575	1
SMC1A	Amp_11q23.3	0.575	1
TET2	Del_16q23.1	0.575	1
U2AF1	Amp_11q23.3	0.575	1
IDH2	RAD21	0.576	1
IDH2	22q-Amp	0.576	1
CEBPA	KRAS	0.577	1
CEBPA	Del_18p11.21	0.577	1
KRAS	WT1	0.577	1
PTPN11	Amp_21q22.2	0.577	1
WT1	Del_12p13.2	0.577	1
WT1	Del_18p11.21	0.577	1
DNMT3A	GIGYF2	0.578	1
RUNX1	8p-Amp	0.584	1
RUNX1	Amp_11q23.3	0.584	1
TET2	8p-Amp	0.584	1
NRAS	8q-Amp	0.586	1
ASXL1	Del_7q32.3	0.594	1
RAD21	Del_7q32.3	0.594	1
22q-Amp	Del_7q32.3	0.594	1
NRAS	PHF6	0.596	1
NRAS	SMC1A	0.596	1
PHF6	TP53	0.596	1
SMC1A	TP53	0.596	1
STAG2	TP53	0.596	1
TP53	U2AF1	0.596	1
KRAS	NPM1	0.597	1
ASXL1	Del_5q31.2	0.612	1
IDH1	RAD21	0.612	1
IDH1	22q-Amp	0.612	1
RAD21	8q-Amp	0.612	1
RAD21	Del_5q31.2	0.612	1
NRAS	RUNX1	0.617	1
NRAS	8p-Amp	0.617	1
TET2	TP53	0.617	1
PHF6	7q-Del	0.618	1
SMC1A	7q-Del	0.618	1
STAG2	7q-Del	0.618	1
CEBPA	KIT	0.619	1
CEBPA	11q-Amp	0.619	1
CEBPA	21q-Amp	0.619	1
CEBPA	17p-Del	0.619	1
KIT	Amp_21q22.2	0.619	1
KIT	Del_7p12.1	0.619	1
SMC3	Del_7p12.1	0.619	1
WT1	11q-Amp	0.619	1
WT1	21q-Amp	0.619	1
WT1	17p-Del	0.619	1
11q-Amp	Amp_21q22.2	0.619	1
21q-Amp	Del_7p12.1	0.619	1
FLT3	PTPN11	0.624	1
ASXL1	TET2	0.631	1
ASXL1	Amp_11q23.3	0.631	1
RAD21	RUNX1	0.631	1
RAD21	TET2	0.631	1
RAD21	8p-Amp	0.631	1
RUNX1	22q-Amp	0.631	1
CEBPA	IDH2	0.642	1
IDH2	WT1	0.642	1
IDH2	Amp_21q22.2	0.642	1
IDH2	Del_7p12.1	0.642	1
KIT	7p-Del	0.645	1
SMC3	7p-Del	0.645	1
21q-Amp	7p-Del	0.645	1
ASXL1	NRAS	0.65	1
ASXL1	TP53	0.65	1
NRAS	22q-Amp	0.65	1
RAD21	TP53	0.65	1
TET2	7q-Del	0.651	1
ASXL1	DNMT3A	0.656	1
DNMT3A	22q-Amp	0.656	1
CEBPA	PHF6	0.663	1
CEBPA	STAG2	0.663	1
CEBPA	U2AF1	0.663	1
CEBPA	5q-Del	0.663	1
CEBPA	Del_16q23.1	0.663	1
PHF6	Amp_21q22.2	0.663	1
PHF6	Del_7p12.1	0.663	1
SMC1A	Amp_21q22.2	0.663	1
SMC1A	Del_7p12.1	0.663	1
STAG2	Amp_21q22.2	0.663	1
STAG2	Del_7p12.1	0.663	1
U2AF1	WT1	0.663	1
U2AF1	Amp_21q22.2	0.663	1
WT1	5q-Del	0.663	1
WT1	Amp_1p33	0.663	1
WT1	Del_16q23.1	0.663	1
Amp_1p33	Amp_21q22.2	0.663	1
KIT	NPM1	0.665	1
WT1	Del_7q32.3	0.668	1
ASXL1	7q-Del	0.67	1
RAD21	7q-Del	0.67	1
22q-Amp	7q-Del	0.67	1
CEBPA	NPM1	0.673	1
DNMT3A	Amp_11q23.3	0.673	1
IDH2	7p-Del	0.683	1
CEBPA	DNMT3A	0.685	1
DNMT3A	Amp_21q22.2	0.685	1
PHF6	7p-Del	0.687	1
SMC1A	7p-Del	0.687	1
STAG2	7p-Del	0.687	1
GIGYF2	NPM1	0.691	1
CEBPA	IDH1	0.694	1
CEBPA	8q-Amp	0.694	1
CEBPA	Del_5q31.2	0.694	1
IDH1	WT1	0.694	1
IDH1	Del_7p12.1	0.694	1
WT1	8q-Amp	0.694	1
KRAS	PTPN11	0.696	1
KRAS	Del_17q11.2	0.696	1
KRAS	Del_18p11.21	0.696	1
DNMT3A	PTPN11	0.708	1
ASXL1	CEBPA	0.711	1
ASXL1	WT1	0.711	1
ASXL1	Del_7p12.1	0.711	1
CEBPA	RAD21	0.711	1
CEBPA	22q-Amp	0.711	1
RAD21	WT1	0.711	1
RAD21	Amp_21q22.2	0.711	1
RAD21	Del_7p12.1	0.711	1
WT1	22q-Amp	0.711	1
CEBPA	TET2	0.72	1
CEBPA	8p-Amp	0.72	1
EZH2	IDH2	0.72	1
TET2	Del_7p12.1	0.72	1
WT1	8p-Amp	0.72	1
WT1	Amp_11q23.3	0.72	1
KIT	KRAS	0.729	1
KIT	PTPN11	0.729	1
KIT	Del_12p13.2	0.729	1
KIT	Del_17q11.2	0.729	1
KIT	Del_18p11.21	0.729	1
KRAS	SMC3	0.729	1
KRAS	11q-Amp	0.729	1
PTPN11	21q-Amp	0.729	1
PTPN11	17p-Del	0.729	1
SMC3	Del_12p13.2	0.729	1
SMC3	Del_18p11.21	0.729	1
21q-Amp	Del_17q11.2	0.729	1
IDH1	7p-Del	0.731	1
ASXL1	7p-Del	0.732	1
RAD21	7p-Del	0.732	1
22q-Amp	7p-Del	0.732	1
NPM1	PHF6	0.733	1
CEBPA	TP53	0.746	1
EZH2	8q-Amp	0.746	1
EZH2	Del_5q31.2	0.746	1
NRAS	WT1	0.746	1
NRAS	Amp_21q22.2	0.746	1
IDH2	8q-Amp	0.751	1
TET2	7p-Del	0.754	1
FLT3	TET2	0.757	1
KIT	SMC3	0.759	1
KIT	11q-Amp	0.759	1
KIT	21q-Amp	0.759	1
KIT	17p-Del	0.759	1
SMC3	11q-Amp	0.759	1
SMC3	21q-Amp	0.759	1
11q-Amp	21q-Amp	0.759	1
21q-Amp	17p-Del	0.759	1
EZH2	8p-Amp	0.76	1
EZH2	Amp_11q23.3	0.76	1
KRAS	PHF6	0.763	1
KRAS	SMC1A	0.763	1
KRAS	STAG2	0.763	1
KRAS	5q-Del	0.763	1
KRAS	Amp_1p33	0.763	1
KRAS	Del_16q23.1	0.763	1
PHF6	Del_18p11.21	0.763	1
PTPN11	U2AF1	0.763	1
PTPN11	5q-Del	0.763	1
PTPN11	Amp_1p33	0.763	1
PTPN11	Del_16q23.1	0.763	1
SMC1A	Del_12p13.2	0.763	1
SMC1A	Del_17q11.2	0.763	1
SMC1A	Del_18p11.21	0.763	1
STAG2	Del_12p13.2	0.763	1
STAG2	Del_17q11.2	0.763	1
STAG2	Del_18p11.21	0.763	1
U2AF1	Del_12p13.2	0.763	1
U2AF1	Del_17q11.2	0.763	1
U2AF1	Del_18p11.21	0.763	1
Del_16q23.1	Del_17q11.2	0.763	1
NPM1	NRAS	0.769	1
WT1	7q-Del	0.771	1
EZH2	TP53	0.774	1
IDH1	Del_7q32.3	0.778	1
IDH2	8p-Amp	0.781	1
DNMT3A	11q-Amp	0.782	1
KIT	PHF6	0.79	1
KIT	SMC1A	0.79	1
KIT	STAG2	0.79	1
KIT	U2AF1	0.79	1
KIT	5q-Del	0.79	1
KIT	Amp_1p33	0.79	1
KIT	Del_16q23.1	0.79	1
PHF6	11q-Amp	0.79	1
PHF6	21q-Amp	0.79	1
PHF6	17p-Del	0.79	1
SMC1A	SMC3	0.79	1
SMC1A	11q-Amp	0.79	1
SMC1A	21q-Amp	0.79	1
SMC1A	17p-Del	0.79	1
SMC3	STAG2	0.79	1
SMC3	Amp_1p33	0.79	1
STAG2	11q-Amp	0.79	1
STAG2	21q-Amp	0.79	1
STAG2	17p-Del	0.79	1
U2AF1	11q-Amp	0.79	1
U2AF1	21q-Amp	0.79	1
U2AF1	17p-Del	0.79	1
21q-Amp	Amp_1p33	0.79	1
17p-Del	Amp_1p33	0.79	1
FLT3	SMC1A	0.798	1
FLT3	STAG2	0.798	1
ASXL1	PTPN11	0.799	1
ASXL1	Del_12p13.2	0.799	1
ASXL1	Del_17q11.2	0.799	1
ASXL1	Del_18p11.21	0.799	1
KRAS	RAD21	0.799	1
KRAS	22q-Amp	0.799	1
PTPN11	RAD21	0.799	1
PTPN11	22q-Amp	0.799	1
RAD21	Del_12p13.2	0.799	1
RAD21	Del_17q11.2	0.799	1
RAD21	Del_18p11.21	0.799	1
22q-Amp	Del_12p13.2	0.799	1
FLT3	WT1	0.801	1
GIGYF2	IDH2	0.804	1
TET2	Del_7q32.3	0.805	1
GIGYF2	Del_7q32.3	0.813	1
CEBPA	EZH2	0.816	1
EZH2	WT1	0.816	1
PHF6	SMC1A	0.817	1
PHF6	STAG2	0.817	1
PHF6	5q-Del	0.817	1
PHF6	Amp_1p33	0.817	1
PHF6	Del_16q23.1	0.817	1
SMC1A	STAG2	0.817	1
SMC1A	U2AF1	0.817	1
SMC1A	5q-Del	0.817	1
SMC1A	Del_16q23.1	0.817	1
STAG2	U2AF1	0.817	1
STAG2	5q-Del	0.817	1
STAG2	Amp_1p33	0.817	1
STAG2	Del_16q23.1	0.817	1
U2AF1	5q-Del	0.817	1
U2AF1	Amp_1p33	0.817	1
U2AF1	Del_16q23.1	0.817	1
5q-Del	Amp_1p33	0.817	1
ASXL1	KIT	0.822	1
ASXL1	SMC3	0.822	1
ASXL1	11q-Amp	0.822	1
ASXL1	17p-Del	0.822	1
KIT	RAD21	0.822	1
KIT	22q-Amp	0.822	1
KRAS	Del_7q32.3	0.822	1
PTPN11	Del_7q32.3	0.822	1
RAD21	SMC3	0.822	1
RAD21	11q-Amp	0.822	1
RAD21	21q-Amp	0.822	1
RAD21	17p-Del	0.822	1
WT1	Del_7p12.1	0.822	1
GIGYF2	IDH1	0.823	1
GIGYF2	Del_5q31.2	0.823	1
IDH1	TET2	0.828	1
GIGYF2	RUNX1	0.833	1
GIGYF2	TET2	0.833	1
GIGYF2	8p-Amp	0.833	1
GIGYF2	Amp_11q23.3	0.833	1
IDH1	PTPN11	0.838	1
PTPN11	Del_5q31.2	0.838	1
8q-Amp	Del_12p13.2	0.838	1
GIGYF2	NRAS	0.843	1
GIGYF2	TP53	0.843	1
IDH2	21q-Amp	0.845	1
ASXL1	PHF6	0.846	1
ASXL1	SMC1A	0.846	1
ASXL1	STAG2	0.846	1
ASXL1	5q-Del	0.846	1
ASXL1	Amp_1p33	0.846	1
ASXL1	Del_16q23.1	0.846	1
PHF6	RAD21	0.846	1
PHF6	22q-Amp	0.846	1
RAD21	SMC1A	0.846	1
RAD21	STAG2	0.846	1
RAD21	U2AF1	0.846	1
RAD21	5q-Del	0.846	1
RAD21	Amp_1p33	0.846	1
RAD21	Del_16q23.1	0.846	1
SMC1A	22q-Amp	0.846	1
STAG2	22q-Amp	0.846	1
U2AF1	22q-Amp	0.846	1
WT1	7p-Del	0.846	1
22q-Amp	Del_16q23.1	0.846	1
DNMT3A	SMC1A	0.851	1
DNMT3A	Amp_1p33	0.851	1
RUNX1	TET2	0.851	1
IDH1	NRAS	0.852	1
NRAS	Del_5q31.2	0.852	1
GIGYF2	7q-Del	0.853	1
KRAS	RUNX1	0.854	1
KRAS	TET2	0.854	1
PTPN11	Amp_11q23.3	0.854	1
RUNX1	Del_12p13.2	0.854	1
RUNX1	Del_17q11.2	0.854	1
TET2	Del_17q11.2	0.854	1
8p-Amp	Del_12p13.2	0.854	1
Amp_11q23.3	Del_12p13.2	0.854	1
DNMT3A	EZH2	0.857	1
KIT	Del_7q32.3	0.859	1
21q-Amp	Del_7q32.3	0.859	1
NRAS	PTPN11	0.869	1
NRAS	Del_12p13.2	0.869	1
NRAS	Del_17q11.2	0.869	1
PTPN11	TP53	0.869	1
ASXL1	RAD21	0.87	1
ASXL1	22q-Amp	0.87	1
RAD21	22q-Amp	0.87	1
IDH1	KIT	0.872	1
IDH1	21q-Amp	0.872	1
KIT	Del_5q31.2	0.872	1
NRAS	TET2	0.872	1
NRAS	Amp_11q23.3	0.872	1
SMC3	8q-Amp	0.872	1
SMC3	Del_5q31.2	0.872	1
CEBPA	GIGYF2	0.873	1
GIGYF2	WT1	0.873	1
GIGYF2	Amp_21q22.2	0.873	1
GIGYF2	Del_7p12.1	0.873	1
EZH2	PTPN11	0.874	1
EZH2	Del_12p13.2	0.874	1
EZH2	Del_17q11.2	0.874	1
EZH2	Del_18p11.21	0.874	1
IDH1	7q-Del	0.874	1
FLT3	RAD21	0.875	1
IDH2	PHF6	0.882	1
IDH2	STAG2	0.882	1
IDH2	U2AF1	0.882	1
IDH2	Amp_1p33	0.882	1
DNMT3A	NRAS	0.884	1
GIGYF2	7p-Del	0.884	1
KRAS	7q-Del	0.884	1
PTPN11	7q-Del	0.884	1
KIT	TET2	0.885	1
RUNX1	SMC3	0.885	1
SMC3	TET2	0.885	1
SMC3	8p-Amp	0.885	1
TET2	11q-Amp	0.885	1
TET2	21q-Amp	0.885	1
TET2	17p-Del	0.885	1
17p-Del	Amp_11q23.3	0.885	1
EZH2	KIT	0.89	1
EZH2	SMC3	0.89	1
EZH2	11q-Amp	0.89	1
EZH2	17p-Del	0.89	1
NRAS	TP53	0.89	1
7q-Del	Amp_11q23.3	0.892	1
U2AF1	Del_7q32.3	0.893	1
NRAS	SMC3	0.897	1
NRAS	11q-Amp	0.897	1
NRAS	17p-Del	0.897	1
SMC3	TP53	0.897	1
CEBPA	Del_7q32.3	0.901	1
Amp_21q22.2	Del_7q32.3	0.901	1
IDH1	SMC1A	0.903	1
IDH1	U2AF1	0.903	1
IDH1	Amp_1p33	0.903	1
PHF6	8q-Amp	0.903	1
SMC1A	8q-Amp	0.903	1
STAG2	8q-Amp	0.903	1
8q-Amp	5q-Del	0.903	1
EZH2	PHF6	0.905	1
EZH2	SMC1A	0.905	1
EZH2	STAG2	0.905	1
EZH2	U2AF1	0.905	1
EZH2	5q-Del	0.905	1
EZH2	Amp_1p33	0.905	1
EZH2	Del_16q23.1	0.905	1
NPM1	SMC3	0.906	1
21q-Amp	7q-Del	0.909	1
CEBPA	PTPN11	0.912	1
CEBPA	Del_12p13.2	0.912	1
CEBPA	Del_17q11.2	0.912	1
FLT3	SMC3	0.912	1
KRAS	Amp_21q22.2	0.912	1
KRAS	Del_7p12.1	0.912	1
PTPN11	WT1	0.912	1
PTPN11	Del_7p12.1	0.912	1
WT1	Del_17q11.2	0.912	1
Amp_21q22.2	Del_12p13.2	0.912	1
PHF6	8p-Amp	0.913	1
SMC1A	TET2	0.913	1
SMC1A	8p-Amp	0.913	1
STAG2	8p-Amp	0.913	1
STAG2	Amp_11q23.3	0.913	1
TET2	U2AF1	0.913	1
TET2	5q-Del	0.913	1
TET2	Amp_1p33	0.913	1
8p-Amp	5q-Del	0.913	1
5q-Del	Amp_11q23.3	0.913	1
Amp_11q23.3	Del_16q23.1	0.913	1
IDH1	Amp_21q22.2	0.914	1
8q-Amp	Amp_21q22.2	0.914	1
GIGYF2	KRAS	0.915	1
GIGYF2	PTPN11	0.915	1
GIGYF2	Del_12p13.2	0.915	1
GIGYF2	Del_17q11.2	0.915	1
GIGYF2	Del_18p11.21	0.915	1
ASXL1	EZH2	0.92	1
EZH2	RAD21	0.92	1
EZH2	22q-Amp	0.92	1
DNMT3A	8q-Amp	0.922	1
NRAS	STAG2	0.923	1
NRAS	U2AF1	0.923	1
NRAS	5q-Del	0.923	1
NRAS	Amp_1p33	0.923	1
NRAS	Del_16q23.1	0.923	1
GIGYF2	KIT	0.925	1
GIGYF2	SMC3	0.925	1
GIGYF2	11q-Amp	0.925	1
GIGYF2	21q-Amp	0.925	1
GIGYF2	17p-Del	0.925	1
KRAS	7p-Del	0.925	1
PTPN11	7p-Del	0.925	1
RUNX1	WT1	0.927	1
RUNX1	Amp_21q22.2	0.927	1
TET2	Amp_21q22.2	0.927	1
8p-Amp	Amp_21q22.2	0.927	1
ASXL1	IDH1	0.932	1
ASXL1	8q-Amp	0.932	1
CEBPA	SMC3	0.932	1
KIT	WT1	0.932	1
SMC3	WT1	0.932	1
SMC3	Amp_21q22.2	0.932	1
U2AF1	7q-Del	0.932	1
8q-Amp	7p-Del	0.932	1
IDH2	Amp_11q23.3	0.934	1
GIGYF2	PHF6	0.936	1
GIGYF2	SMC1A	0.936	1
GIGYF2	STAG2	0.936	1
GIGYF2	U2AF1	0.936	1
GIGYF2	5q-Del	0.936	1
GIGYF2	Amp_1p33	0.936	1
GIGYF2	Del_16q23.1	0.936	1
NRAS	Del_7p12.1	0.938	1
ASXL1	8p-Amp	0.939	1
NPM1	STAG2	0.939	1
RAD21	Amp_11q23.3	0.939	1
TET2	22q-Amp	0.939	1
8p-Amp	7p-Del	0.942	1
7p-Del	Amp_11q23.3	0.942	1
DNMT3A	TET2	0.944	1
DNMT3A	8p-Amp	0.944	1
Amp_11q23.3	Del_7q32.3	0.945	1
ASXL1	GIGYF2	0.946	1
GIGYF2	22q-Amp	0.946	1
NRAS	RAD21	0.946	1
CEBPA	SMC1A	0.949	1
CEBPA	7q-Del	0.949	1
CEBPA	Amp_1p33	0.949	1
SMC1A	WT1	0.949	1
STAG2	WT1	0.949	1
U2AF1	Del_7p12.1	0.949	1
7q-Del	Amp_21q22.2	0.949	1
Del_7p12.1	Del_16q23.1	0.949	1
NRAS	7p-Del	0.951	1
8q-Amp	Amp_11q23.3	0.954	1
IDH1	NPM1	0.956	1
U2AF1	7p-Del	0.957	1
7p-Del	Amp_1p33	0.957	1
7p-Del	Del_16q23.1	0.957	1
KRAS	Del_12p13.2	0.959	1
PTPN11	Del_17q11.2	0.959	1
PTPN11	Del_18p11.21	0.959	1
TET2	Amp_11q23.3	0.963	1
8p-Amp	Amp_11q23.3	0.963	1
ASXL1	Amp_21q22.2	0.965	1
22q-Amp	Del_7p12.1	0.965	1
CEBPA	WT1	0.966	1
CEBPA	Del_7p12.1	0.966	1
NPM1	RAD21	0.966	1
NPM1	WT1	0.967	1
EZH2	GIGYF2	0.968	1
Del_7q32.3	Del_17q11.2	0.968	1
KRAS	21q-Amp	0.969	1
KRAS	17p-Del	0.969	1
PTPN11	SMC3	0.969	1
PTPN11	11q-Amp	0.969	1
SMC3	Del_17q11.2	0.969	1
11q-Amp	Del_12p13.2	0.969	1
21q-Amp	Del_12p13.2	0.969	1
DNMT3A	U2AF1	0.97	1
NPM1	PTPN11	0.971	1
KRAS	8q-Amp	0.972	1
8q-Amp	7q-Del	0.972	1
8q-Amp	Del_17q11.2	0.972	1
8q-Amp	Del_18p11.21	0.972	1
CEBPA	7p-Del	0.974	1
SMC3	17p-Del	0.976	1
11q-Amp	17p-Del	0.976	1
EZH2	IDH1	0.977	1
KRAS	U2AF1	0.977	1
KRAS	8p-Amp	0.977	1
PHF6	PTPN11	0.977	1
PHF6	Del_12p13.2	0.977	1
PTPN11	SMC1A	0.977	1
8p-Amp	7q-Del	0.977	1
8p-Amp	Del_17q11.2	0.977	1
8p-Amp	Del_18p11.21	0.977	1
5q-Del	Del_17q11.2	0.977	1
Amp_1p33	Del_12p13.2	0.977	1
Amp_1p33	Del_18p11.21	0.977	1
Amp_11q23.3	Del_17q11.2	0.977	1
Amp_11q23.3	Del_18p11.21	0.977	1
Del_12p13.2	Del_16q23.1	0.977	1
11q-Amp	Del_7q32.3	0.978	1
DNMT3A	KRAS	0.98	1
EZH2	RUNX1	0.98	1
EZH2	TET2	0.98	1
EZH2	NRAS	0.982	1
NRAS	7q-Del	0.982	1
21q-Amp	8q-Amp	0.982	1
8q-Amp	17p-Del	0.982	1
DNMT3A	FLT3	0.983	1
PHF6	SMC3	0.983	1
SMC3	U2AF1	0.983	1
SMC3	5q-Del	0.983	1
SMC3	Del_16q23.1	0.983	1
11q-Amp	5q-Del	0.983	1
11q-Amp	Del_16q23.1	0.983	1
17p-Del	Del_16q23.1	0.983	1
ASXL1	KRAS	0.984	1
22q-Amp	Del_18p11.21	0.984	1
8q-Amp	Del_7p12.1	0.984	1
7q-Del	Del_17q11.2	0.984	1
RUNX1	21q-Amp	0.985	1
21q-Amp	8p-Amp	0.985	1
8p-Amp	17p-Del	0.985	1
8q-Amp	Del_7q32.3	0.985	1
PHF6	U2AF1	0.987	1
SMC1A	Amp_1p33	0.987	1
8p-Amp	Del_7p12.1	0.987	1
Amp_1p33	Del_7q32.3	0.987	1
Amp_1p33	Del_16q23.1	0.987	1
Amp_11q23.3	Del_7p12.1	0.987	1
ASXL1	21q-Amp	0.988	1
DNMT3A	RAD21	0.988	1
SMC3	22q-Amp	0.988	1
21q-Amp	22q-Amp	0.988	1
22q-Amp	17p-Del	0.988	1
EZH2	Del_7p12.1	0.989	1
IDH1	8q-Amp	0.989	1
U2AF1	8q-Amp	0.989	1
8p-Amp	Del_7q32.3	0.989	1
8q-Amp	Del_5q31.2	0.989	1
8q-Amp	Del_16q23.1	0.989	1
CEBPA	NRAS	0.99	1
11q-Amp	7q-Del	0.99	1
Amp_21q22.2	Del_17q11.2	0.99	1
Del_7p12.1	Del_17q11.2	0.99	1
ASXL1	U2AF1	0.991	1
EZH2	7p-Del	0.991	1
IDH1	8p-Amp	0.991	1
RUNX1	STAG2	0.991	1
RUNX1	U2AF1	0.991	1
STAG2	TET2	0.991	1
U2AF1	8p-Amp	0.991	1
8p-Amp	Del_5q31.2	0.991	1
8p-Amp	Del_16q23.1	0.991	1
Amp_11q23.3	Del_5q31.2	0.991	1
GIGYF2	8q-Amp	0.992	1
NPM1	SMC1A	0.992	1
NRAS	Del_7q32.3	0.992	1
7p-Del	Del_17q11.2	0.992	1
TP53	7p-Del	0.993	1
TP53	8q-Amp	0.994	1
22q-Amp	8q-Amp	0.994	1
17p-Del	Amp_21q22.2	0.994	1
7q-Del	Amp_1p33	0.994	1
EZH2	KRAS	0.995	1
TP53	8p-Amp	0.995	1
11q-Amp	7p-Del	0.995	1
22q-Amp	8p-Amp	0.995	1
EZH2	21q-Amp	0.996	1
IDH2	KRAS	0.996	1
PHF6	WT1	0.996	1
5q-Del	Del_7p12.1	0.996	1
Amp_1p33	Del_7p12.1	0.996	1
Amp_21q22.2	Del_16q23.1	0.996	1
PTPN11	Del_12p13.2	0.997	1
5q-Del	7p-Del	0.997	1
Del_17q11.2	Del_18p11.21	0.997	1
TP53	Del_12p13.2	0.998	1
11q-Amp	8q-Amp	0.998	1
11q-Amp	Del_17q11.2	0.998	1
11q-Amp	Del_18p11.21	0.998	1
21q-Amp	Del_5q31.2	0.998	1
21q-Amp	Del_18p11.21	0.998	1
22q-Amp	Amp_21q22.2	0.998	1
17p-Del	Del_7q32.3	0.998	1
17p-Del	Del_12p13.2	0.998	1
DNMT3A	IDH1	0.999	1
DNMT3A	NPM1	0.999	1
EZH2	Del_7q32.3	0.999	1
GIGYF2	RAD21	0.999	1
PHF6	RUNX1	0.999	1
PHF6	Del_17q11.2	0.999	1
PTPN11	STAG2	0.999	1
TP53	21q-Amp	0.999	1
TP53	17p-Del	0.999	1
TP53	Amp_11q23.3	0.999	1
TP53	Del_7p12.1	0.999	1
TP53	Del_7q32.3	0.999	1
11q-Amp	8p-Amp	0.999	1
11q-Amp	Amp_1p33	0.999	1
21q-Amp	Del_16q23.1	0.999	1
17p-Del	7q-Del	0.999	1
5q-Del	Del_7q32.3	0.999	1
5q-Del	Del_12p13.2	0.999	1
Amp_1p33	Amp_11q23.3	0.999	1
Amp_1p33	Del_5q31.2	0.999	1
Amp_1p33	Del_17q11.2	0.999	1
Amp_21q22.2	Del_18p11.21	0.999	1
Del_7q32.3	Del_16q23.1	0.999	1
Del_16q23.1	Del_18p11.21	0.999	1
ASXL1	IDH2	1	1
ASXL1	RUNX1	1	1
DNMT3A	SMC3	1	1
EZH2	7q-Del	1	1
EZH2	Amp_21q22.2	1	1
FLT3	NPM1	1	1
IDH2	RUNX1	1	1
TP53	11q-Amp	1	1
TP53	22q-Amp	1	1
TP53	5q-Del	1	1
TP53	7q-Del	1	1
TP53	Amp_1p33	1	1
TP53	Amp_21q22.2	1	1
TP53	Del_5q31.2	1	1
TP53	Del_16q23.1	1	1
TP53	Del_17q11.2	1	1
TP53	Del_18p11.21	1	1
11q-Amp	22q-Amp	1	1
11q-Amp	Amp_11q23.3	1	1
11q-Amp	Del_5q31.2	1	1
11q-Amp	Del_7p12.1	1	1
21q-Amp	5q-Del	1	1
21q-Amp	Amp_21q22.2	1	1
22q-Amp	5q-Del	1	1
22q-Amp	Amp_1p33	1	1
22q-Amp	Amp_11q23.3	1	1
22q-Amp	Del_5q31.2	1	1
22q-Amp	Del_17q11.2	1	1
8p-Amp	8q-Amp	1	1
8p-Amp	Amp_1p33	1	1
8q-Amp	Amp_1p33	1	1
17p-Del	5q-Del	1	1
17p-Del	7p-Del	1	1
17p-Del	Del_5q31.2	1	1
17p-Del	Del_7p12.1	1	1
17p-Del	Del_17q11.2	1	1
17p-Del	Del_18p11.21	1	1
5q-Del	7q-Del	1	1
5q-Del	Amp_21q22.2	1	1
5q-Del	Del_5q31.2	1	1
5q-Del	Del_16q23.1	1	1
5q-Del	Del_18p11.21	1	1
7p-Del	7q-Del	1	1
7p-Del	Del_5q31.2	1	1
7p-Del	Del_7p12.1	1	1
7p-Del	Del_7q32.3	1	1
7p-Del	Del_12p13.2	1	1
7p-Del	Del_18p11.21	1	1
7q-Del	Del_5q31.2	1	1
7q-Del	Del_7p12.1	1	1
7q-Del	Del_7q32.3	1	1
7q-Del	Del_12p13.2	1	1
7q-Del	Del_16q23.1	1	1
7q-Del	Del_18p11.21	1	1
Amp_21q22.2	Del_5q31.2	1	1
Del_5q31.2	Del_7p12.1	1	1
Del_5q31.2	Del_7q32.3	1	1
Del_5q31.2	Del_12p13.2	1	1
Del_5q31.2	Del_16q23.1	1	1
Del_5q31.2	Del_17q11.2	1	1
Del_5q31.2	Del_18p11.21	1	1
Del_7p12.1	Del_7q32.3	1	1
Del_7p12.1	Del_12p13.2	1	1
Del_7p12.1	Del_18p11.21	1	1
Del_7q32.3	Del_12p13.2	1	1
Del_7q32.3	Del_18p11.21	1	1
Del_12p13.2	Del_17q11.2	1	1
Del_12p13.2	Del_18p11.21	1	1
