gene1	gene2	pval	qval
5q-Del	Amp_21q22.2	0.000149	1
Del_5q31.2	Del_7p12.1	0.000166	1
Del_5q31.2	Del_12p13.2	0.000175	1
Del_5q31.2	Del_17q11.2	0.000175	1
ASXL1	RUNX1	0.000186	1
Del_7q32.3	Del_12p13.2	0.000239	1
22q-Amp	Del_5q31.2	0.000243	1
IDH2	RUNX1	0.000261	1
11q-Amp	22q-Amp	0.000331	1
5q-Del	Del_16q23.1	0.000377	1
ASXL1	IDH2	0.000391	1
TP53	Amp_1p33	0.000401	1
TP53	Del_16q23.1	0.000401	1
22q-Amp	Del_17q11.2	0.000526	1
8p-Amp	Amp_1p33	0.000529	1
Del_7p12.1	Del_18p11.21	0.000648	1
21q-Amp	5q-Del	0.000652	1
17p-Del	5q-Del	0.000652	1
8q-Amp	Amp_1p33	0.000686	1
Del_5q31.2	Del_16q23.1	0.000686	1
DNMT3A	SMC3	0.000813	1
5q-Del	Del_18p11.21	0.00103	1
7p-Del	Del_5q31.2	0.00121	1
7q-Del	Del_18p11.21	0.00126	1
FLT3	NPM1	0.00131	1
11q-Amp	Del_5q31.2	0.00151	1
17p-Del	Del_17q11.2	0.00176	1
17p-Del	Del_18p11.21	0.00176	1
TP53	7q-Del	0.00234	1
Del_12p13.2	Del_17q11.2	0.00276	1
Del_7q32.3	Del_18p11.21	0.00358	1
DNMT3A	NPM1	0.00359	1
TP53	Amp_11q23.3	0.00462	1
22q-Amp	Amp_11q23.3	0.00491	1
17p-Del	7p-Del	0.00494	1
5q-Del	7q-Del	0.0062	1
7q-Del	Del_16q23.1	0.0062	1
DNMT3A	IDH1	0.00635	1
11q-Amp	Del_7p12.1	0.00647	1
17p-Del	Del_7p12.1	0.00647	1
7p-Del	Del_18p11.21	0.00764	1
TP53	Del_7q32.3	0.00822	1
22q-Amp	5q-Del	0.00852	1
22q-Amp	Amp_1p33	0.00852	1
PHF6	RUNX1	0.00929	1
Amp_1p33	Amp_11q23.3	0.00929	1
TP53	Del_7p12.1	0.00976	1
Amp_21q22.2	Del_18p11.21	0.00997	1
17p-Del	7q-Del	0.0103	1
Amp_1p33	Del_5q31.2	0.0111	1
EZH2	Amp_21q22.2	0.0113	1
TP53	21q-Amp	0.0127	1
TP53	17p-Del	0.0127	1
5q-Del	Del_7q32.3	0.0132	1
Del_7q32.3	Del_16q23.1	0.0132	1
11q-Amp	8p-Amp	0.0154	1
EZH2	7q-Del	0.0155	1
11q-Amp	Amp_1p33	0.0174	1
21q-Amp	Del_16q23.1	0.0174	1
11q-Amp	8q-Amp	0.0183	1
21q-Amp	Del_5q31.2	0.0183	1
TP53	Del_12p13.2	0.0193	1
17p-Del	Del_7q32.3	0.0216	1
PHF6	Del_17q11.2	0.0228	1
PTPN11	STAG2	0.0228	1
5q-Del	Del_12p13.2	0.0228	1
Amp_1p33	Del_17q11.2	0.0228	1
Del_16q23.1	Del_18p11.21	0.0228	1
EZH2	Del_7q32.3	0.0257	1
TP53	8p-Amp	0.0292	1
11q-Amp	Del_17q11.2	0.0312	1
11q-Amp	Del_18p11.21	0.0312	1
21q-Amp	Del_18p11.21	0.0312	1
17p-Del	Del_12p13.2	0.0312	1
22q-Amp	Amp_21q22.2	0.0351	1
TP53	8q-Amp	0.0363	1
IDH2	KRAS	0.0377	1
PTPN11	Del_12p13.2	0.0407	1
Del_17q11.2	Del_18p11.21	0.0407	1
DNMT3A	FLT3	0.0409	1
5q-Del	7p-Del	0.0429	1
NRAS	Del_7q32.3	0.0443	1
IDH1	8p-Amp	0.0455	1
8p-Amp	Del_5q31.2	0.0455	1
Amp_11q23.3	Del_5q31.2	0.0455	1
TP53	7p-Del	0.0488	1
PHF6	WT1	0.0507	1
5q-Del	Del_7p12.1	0.0507	1
Amp_1p33	Del_7p12.1	0.0507	1
Amp_21q22.2	Del_16q23.1	0.0507	1
GIGYF2	RAD21	0.0538	1
8p-Amp	Del_7q32.3	0.0554	1
IDH1	8q-Amp	0.0561	1
8q-Amp	Del_5q31.2	0.0561	1
11q-Amp	7p-Del	0.058	1
NPM1	SMC1A	0.0609	1
22q-Amp	8p-Amp	0.0609	1
CEBPA	NRAS	0.0618	1
8q-Amp	Del_7q32.3	0.0678	1
7q-Del	Amp_1p33	0.0678	1
22q-Amp	8q-Amp	0.0682	1
17p-Del	Amp_21q22.2	0.0683	1
8p-Amp	Del_7p12.1	0.0732	1
Amp_11q23.3	Del_7p12.1	0.0732	1
7p-Del	Del_17q11.2	0.0748	1
8q-Amp	Del_7p12.1	0.0855	1
RUNX1	STAG2	0.0867	1
RUNX1	U2AF1	0.0867	1
STAG2	TET2	0.0867	1
U2AF1	8p-Amp	0.0867	1
8p-Amp	Del_16q23.1	0.0867	1
Amp_21q22.2	Del_17q11.2	0.0878	1
Del_7p12.1	Del_17q11.2	0.0878	1
DNMT3A	RAD21	0.0895	1
11q-Amp	7q-Del	0.0907	1
NRAS	7q-Del	0.0924	1
DNMT3A	KRAS	0.0946	1
U2AF1	8q-Amp	0.0968	1
8q-Amp	Del_16q23.1	0.0968	1
Amp_1p33	Del_7q32.3	0.107	1
8p-Amp	7q-Del	0.108	1
EZH2	21q-Amp	0.11	1
RUNX1	21q-Amp	0.115	1
21q-Amp	8p-Amp	0.115	1
8p-Amp	17p-Del	0.115	1
7q-Del	Del_17q11.2	0.116	1
NPM1	WT1	0.122	1
EZH2	KRAS	0.126	1
8q-Amp	7q-Del	0.126	1
21q-Amp	8q-Amp	0.128	1
8q-Amp	17p-Del	0.128	1
IDH1	NPM1	0.134	1
NPM1	PTPN11	0.134	1
11q-Amp	Del_7q32.3	0.141	1
KRAS	8p-Amp	0.146	1
8p-Amp	Del_17q11.2	0.146	1
8p-Amp	Del_18p11.21	0.146	1
Amp_11q23.3	Del_17q11.2	0.146	1
Amp_11q23.3	Del_18p11.21	0.146	1
DNMT3A	U2AF1	0.149	1
TET2	Amp_11q23.3	0.149	1
8p-Amp	Amp_11q23.3	0.149	1
DNMT3A	TET2	0.152	1
DNMT3A	8p-Amp	0.152	1
ASXL1	U2AF1	0.154	1
CEBPA	7p-Del	0.154	1
KRAS	8q-Amp	0.162	1
8q-Amp	Del_17q11.2	0.162	1
8q-Amp	Del_18p11.21	0.162	1
EZH2	7p-Del	0.17	1
8q-Amp	Amp_11q23.3	0.172	1
GIGYF2	8q-Amp	0.177	1
ASXL1	21q-Amp	0.178	1
CEBPA	WT1	0.178	1
CEBPA	Del_7p12.1	0.178	1
SMC3	22q-Amp	0.178	1
21q-Amp	22q-Amp	0.178	1
22q-Amp	17p-Del	0.178	1
Del_7q32.3	Del_17q11.2	0.178	1
PHF6	U2AF1	0.183	1
SMC1A	Amp_1p33	0.183	1
Amp_1p33	Del_16q23.1	0.183	1
EZH2	Del_7p12.1	0.184	1
DNMT3A	8q-Amp	0.193	1
Amp_11q23.3	Del_7q32.3	0.195	1
NPM1	RAD21	0.198	1
ASXL1	KRAS	0.201	1
22q-Amp	Del_18p11.21	0.201	1
PHF6	SMC3	0.21	1
SMC3	U2AF1	0.21	1
SMC3	5q-Del	0.21	1
SMC3	Del_16q23.1	0.21	1
11q-Amp	5q-Del	0.21	1
11q-Amp	Del_16q23.1	0.21	1
17p-Del	Del_16q23.1	0.21	1
IDH2	Amp_11q23.3	0.219	1
NRAS	7p-Del	0.222	1
EZH2	NRAS	0.226	1
CEBPA	7q-Del	0.229	1
7q-Del	Amp_21q22.2	0.229	1
KRAS	U2AF1	0.237	1
PHF6	PTPN11	0.237	1
PHF6	Del_12p13.2	0.237	1
PTPN11	SMC1A	0.237	1
5q-Del	Del_17q11.2	0.237	1
Amp_1p33	Del_12p13.2	0.237	1
Amp_1p33	Del_18p11.21	0.237	1
Del_12p13.2	Del_16q23.1	0.237	1
EZH2	RUNX1	0.24	1
EZH2	TET2	0.24	1
SMC3	17p-Del	0.241	1
11q-Amp	17p-Del	0.241	1
8p-Amp	7p-Del	0.246	1
7p-Del	Amp_11q23.3	0.246	1
EZH2	IDH1	0.254	1
NRAS	Del_7p12.1	0.254	1
NPM1	STAG2	0.267	1
8q-Amp	7p-Del	0.269	1
KRAS	21q-Amp	0.271	1
KRAS	17p-Del	0.271	1
PTPN11	SMC3	0.271	1
PTPN11	11q-Amp	0.271	1
SMC3	Del_17q11.2	0.271	1
11q-Amp	Del_12p13.2	0.271	1
21q-Amp	Del_12p13.2	0.271	1
DNMT3A	NRAS	0.272	1
RUNX1	WT1	0.28	1
RUNX1	Amp_21q22.2	0.28	1
TET2	Amp_21q22.2	0.28	1
8p-Amp	Amp_21q22.2	0.28	1
FLT3	SMC3	0.288	1
ASXL1	Amp_21q22.2	0.289	1
22q-Amp	Del_7p12.1	0.289	1
KRAS	Del_12p13.2	0.304	1
PTPN11	Del_17q11.2	0.304	1
PTPN11	Del_18p11.21	0.304	1
IDH1	Amp_21q22.2	0.306	1
8q-Amp	Amp_21q22.2	0.306	1
U2AF1	7p-Del	0.313	1
7p-Del	Amp_1p33	0.313	1
7p-Del	Del_16q23.1	0.313	1
CEBPA	Del_7q32.3	0.332	1
Amp_21q22.2	Del_7q32.3	0.332	1
NPM1	SMC3	0.335	1
CEBPA	SMC1A	0.337	1
CEBPA	Amp_1p33	0.337	1
SMC1A	WT1	0.337	1
STAG2	WT1	0.337	1
U2AF1	Del_7p12.1	0.337	1
Del_7p12.1	Del_16q23.1	0.337	1
7q-Del	Amp_11q23.3	0.349	1
NRAS	RAD21	0.35	1
NRAS	TP53	0.351	1
ASXL1	8p-Amp	0.369	1
RAD21	Amp_11q23.3	0.369	1
TET2	22q-Amp	0.369	1
IDH1	7q-Del	0.379	1
CEBPA	SMC3	0.381	1
KIT	WT1	0.381	1
SMC3	WT1	0.381	1
SMC3	Amp_21q22.2	0.381	1
U2AF1	7q-Del	0.382	1
NRAS	TET2	0.383	1
NRAS	Amp_11q23.3	0.383	1
ASXL1	IDH1	0.388	1
ASXL1	8q-Amp	0.388	1
KRAS	7p-Del	0.395	1
PTPN11	7p-Del	0.395	1
NRAS	STAG2	0.404	1
NRAS	U2AF1	0.404	1
NRAS	5q-Del	0.404	1
NRAS	Amp_1p33	0.404	1
NRAS	Del_16q23.1	0.404	1
FLT3	RAD21	0.413	1
IDH1	NRAS	0.414	1
NRAS	Del_5q31.2	0.414	1
RUNX1	TET2	0.416	1
FLT3	WT1	0.419	1
CEBPA	PTPN11	0.423	1
CEBPA	Del_12p13.2	0.423	1
CEBPA	Del_17q11.2	0.423	1
KRAS	Amp_21q22.2	0.423	1
KRAS	Del_7p12.1	0.423	1
PTPN11	WT1	0.423	1
PTPN11	Del_7p12.1	0.423	1
WT1	Del_17q11.2	0.423	1
Amp_21q22.2	Del_12p13.2	0.423	1
PHF6	8p-Amp	0.425	1
SMC1A	TET2	0.425	1
SMC1A	8p-Amp	0.425	1
STAG2	8p-Amp	0.425	1
STAG2	Amp_11q23.3	0.425	1
TET2	U2AF1	0.425	1
TET2	5q-Del	0.425	1
TET2	Amp_1p33	0.425	1
8p-Amp	5q-Del	0.425	1
5q-Del	Amp_11q23.3	0.425	1
Amp_11q23.3	Del_16q23.1	0.425	1
21q-Amp	7q-Del	0.431	1
DNMT3A	SMC1A	0.441	1
DNMT3A	Amp_1p33	0.441	1
IDH1	SMC1A	0.446	1
IDH1	U2AF1	0.446	1
IDH1	Amp_1p33	0.446	1
PHF6	8q-Amp	0.446	1
SMC1A	8q-Amp	0.446	1
STAG2	8q-Amp	0.446	1
8q-Amp	5q-Del	0.446	1
IDH1	TET2	0.449	1
FLT3	TET2	0.45	1
NRAS	SMC3	0.454	1
NRAS	11q-Amp	0.454	1
NRAS	17p-Del	0.454	1
SMC3	TP53	0.454	1
U2AF1	Del_7q32.3	0.466	1
KRAS	7q-Del	0.476	1
PTPN11	7q-Del	0.476	1
KIT	TET2	0.477	1
RUNX1	SMC3	0.477	1
SMC3	TET2	0.477	1
SMC3	8p-Amp	0.477	1
TET2	11q-Amp	0.477	1
TET2	21q-Amp	0.477	1
TET2	17p-Del	0.477	1
17p-Del	Amp_11q23.3	0.477	1
NPM1	NRAS	0.48	1
TET2	Del_7q32.3	0.481	1
IDH2	PHF6	0.485	1
IDH2	STAG2	0.485	1
IDH2	U2AF1	0.485	1
IDH2	Amp_1p33	0.485	1
IDH1	KIT	0.499	1
IDH1	21q-Amp	0.499	1
KIT	Del_5q31.2	0.499	1
SMC3	8q-Amp	0.499	1
SMC3	Del_5q31.2	0.499	1
NRAS	PTPN11	0.501	1
NRAS	Del_12p13.2	0.501	1
NRAS	Del_17q11.2	0.501	1
PTPN11	TP53	0.501	1
IDH2	8p-Amp	0.511	1
IDH1	Del_7q32.3	0.515	1
FLT3	SMC1A	0.519	1
FLT3	STAG2	0.519	1
KIT	Del_7q32.3	0.52	1
21q-Amp	Del_7q32.3	0.52	1
KRAS	RUNX1	0.524	1
KRAS	TET2	0.524	1
PTPN11	Amp_11q23.3	0.524	1
RUNX1	Del_12p13.2	0.524	1
RUNX1	Del_17q11.2	0.524	1
TET2	Del_17q11.2	0.524	1
8p-Amp	Del_12p13.2	0.524	1
Amp_11q23.3	Del_12p13.2	0.524	1
DNMT3A	11q-Amp	0.531	1
WT1	7p-Del	0.534	1
IDH2	21q-Amp	0.54	1
IDH2	8q-Amp	0.546	1
IDH1	PTPN11	0.547	1
PTPN11	Del_5q31.2	0.547	1
8q-Amp	Del_12p13.2	0.547	1
DNMT3A	Amp_11q23.3	0.561	1
DNMT3A	EZH2	0.562	1
WT1	Del_7p12.1	0.566	1
KRAS	Del_7q32.3	0.569	1
PTPN11	Del_7q32.3	0.569	1
CEBPA	DNMT3A	0.581	1
DNMT3A	Amp_21q22.2	0.581	1
DNMT3A	PTPN11	0.61	1
WT1	7q-Del	0.625	1
CEBPA	NPM1	0.634	1
TET2	7p-Del	0.643	1
CEBPA	TP53	0.651	1
NRAS	WT1	0.651	1
NRAS	Amp_21q22.2	0.651	1
IDH1	7p-Del	0.666	1
NPM1	PHF6	0.675	1
CEBPA	TET2	0.676	1
CEBPA	8p-Amp	0.676	1
TET2	Del_7p12.1	0.676	1
WT1	8p-Amp	0.676	1
WT1	Amp_11q23.3	0.676	1
FLT3	PTPN11	0.69	1
CEBPA	IDH1	0.699	1
CEBPA	8q-Amp	0.699	1
CEBPA	Del_5q31.2	0.699	1
IDH1	WT1	0.699	1
IDH1	Del_7p12.1	0.699	1
WT1	8q-Amp	0.699	1
IDH2	7p-Del	0.709	1
DNMT3A	IDH2	0.713	1
WT1	Del_7q32.3	0.721	1
KIT	NPM1	0.732	1
TET2	7q-Del	0.734	1
CEBPA	IDH2	0.741	1
IDH2	WT1	0.741	1
IDH2	Amp_21q22.2	0.741	1
IDH2	Del_7p12.1	0.741	1
ASXL1	DNMT3A	0.749	1
DNMT3A	22q-Amp	0.749	1
NRAS	RUNX1	0.759	1
NRAS	8p-Amp	0.759	1
TET2	TP53	0.759	1
KRAS	NPM1	0.779	1
NRAS	8q-Amp	0.78	1
RUNX1	8p-Amp	0.782	1
RUNX1	Amp_11q23.3	0.782	1
TET2	8p-Amp	0.782	1
NPM1	TET2	0.792	1
IDH2	7q-Del	0.795	1
IDH1	RUNX1	0.802	1
IDH1	Amp_11q23.3	0.802	1
RUNX1	8q-Amp	0.802	1
TET2	8q-Amp	0.802	1
TET2	Del_5q31.2	0.802	1
DNMT3A	PHF6	0.811	1
DNMT3A	5q-Del	0.811	1
DNMT3A	Del_16q23.1	0.811	1
DNMT3A	WT1	0.83	1
FLT3	PHF6	0.855	1
FLT3	Amp_1p33	0.855	1
FLT3	Del_16q23.1	0.855	1
IDH1	IDH2	0.857	1
DNMT3A	KIT	0.858	1
DNMT3A	17p-Del	0.858	1
FLT3	8p-Amp	0.863	1
FLT3	Amp_11q23.3	0.863	1
IDH2	Del_7q32.3	0.873	1
CEBPA	FLT3	0.886	1
DNMT3A	7q-Del	0.892	1
FLT3	IDH1	0.892	1
FLT3	8q-Amp	0.892	1
DNMT3A	Del_17q11.2	0.893	1
FLT3	KIT	0.896	1
FLT3	11q-Amp	0.896	1
DNMT3A	TP53	0.915	1
FLT3	Del_7q32.3	0.915	1
FLT3	Del_18p11.21	0.925	1
DNMT3A	Del_5q31.2	0.947	1
FLT3	NRAS	0.95	1
DNMT3A	7p-Del	0.955	1
NPM1	8p-Amp	0.955	1
DNMT3A	Del_7q32.3	0.959	1
NPM1	8q-Amp	0.963	1
DNMT3A	Del_7p12.1	0.967	1
NPM1	Del_7q32.3	0.97	1
FLT3	7p-Del	0.973	1
FLT3	Del_7p12.1	0.981	1
FLT3	IDH2	0.985	1
DNMT3A	RUNX1	0.99	1
FLT3	7q-Del	0.99	1
FLT3	RUNX1	0.995	1
ASXL1	CEBPA	1	1
ASXL1	EZH2	1	1
ASXL1	FLT3	1	1
ASXL1	GIGYF2	1	1
ASXL1	KIT	1	1
ASXL1	NPM1	1	1
ASXL1	NRAS	1	1
ASXL1	PHF6	1	1
ASXL1	PTPN11	1	1
ASXL1	RAD21	1	1
ASXL1	SMC1A	1	1
ASXL1	SMC3	1	1
ASXL1	STAG2	1	1
ASXL1	TET2	1	1
ASXL1	TP53	1	1
ASXL1	WT1	1	1
ASXL1	11q-Amp	1	1
ASXL1	22q-Amp	1	1
ASXL1	17p-Del	1	1
ASXL1	5q-Del	1	1
ASXL1	7p-Del	1	1
ASXL1	7q-Del	1	1
ASXL1	Amp_1p33	1	1
ASXL1	Amp_11q23.3	1	1
ASXL1	Del_5q31.2	1	1
ASXL1	Del_7p12.1	1	1
ASXL1	Del_7q32.3	1	1
ASXL1	Del_12p13.2	1	1
ASXL1	Del_16q23.1	1	1
ASXL1	Del_17q11.2	1	1
ASXL1	Del_18p11.21	1	1
CEBPA	EZH2	1	1
CEBPA	GIGYF2	1	1
CEBPA	KIT	1	1
CEBPA	KRAS	1	1
CEBPA	PHF6	1	1
CEBPA	RAD21	1	1
CEBPA	RUNX1	1	1
CEBPA	STAG2	1	1
CEBPA	U2AF1	1	1
CEBPA	11q-Amp	1	1
CEBPA	21q-Amp	1	1
CEBPA	22q-Amp	1	1
CEBPA	17p-Del	1	1
CEBPA	5q-Del	1	1
CEBPA	Amp_11q23.3	1	1
CEBPA	Amp_21q22.2	1	1
CEBPA	Del_16q23.1	1	1
CEBPA	Del_18p11.21	1	1
DNMT3A	GIGYF2	1	1
DNMT3A	STAG2	1	1
DNMT3A	21q-Amp	1	1
DNMT3A	Del_12p13.2	1	1
DNMT3A	Del_18p11.21	1	1
EZH2	FLT3	1	1
EZH2	GIGYF2	1	1
EZH2	IDH2	1	1
EZH2	KIT	1	1
EZH2	NPM1	1	1
EZH2	PHF6	1	1
EZH2	PTPN11	1	1
EZH2	RAD21	1	1
EZH2	SMC1A	1	1
EZH2	SMC3	1	1
EZH2	STAG2	1	1
EZH2	TP53	1	1
EZH2	U2AF1	1	1
EZH2	WT1	1	1
EZH2	11q-Amp	1	1
EZH2	22q-Amp	1	1
EZH2	8p-Amp	1	1
EZH2	8q-Amp	1	1
EZH2	17p-Del	1	1
EZH2	5q-Del	1	1
EZH2	Amp_1p33	1	1
EZH2	Amp_11q23.3	1	1
EZH2	Del_5q31.2	1	1
EZH2	Del_12p13.2	1	1
EZH2	Del_16q23.1	1	1
EZH2	Del_17q11.2	1	1
EZH2	Del_18p11.21	1	1
FLT3	GIGYF2	1	1
FLT3	KRAS	1	1
FLT3	TP53	1	1
FLT3	U2AF1	1	1
FLT3	21q-Amp	1	1
FLT3	22q-Amp	1	1
FLT3	17p-Del	1	1
FLT3	5q-Del	1	1
FLT3	Amp_21q22.2	1	1
FLT3	Del_5q31.2	1	1
FLT3	Del_12p13.2	1	1
FLT3	Del_17q11.2	1	1
GIGYF2	IDH1	1	1
GIGYF2	IDH2	1	1
GIGYF2	KIT	1	1
GIGYF2	KRAS	1	1
GIGYF2	NPM1	1	1
GIGYF2	NRAS	1	1
GIGYF2	PHF6	1	1
GIGYF2	PTPN11	1	1
GIGYF2	RUNX1	1	1
GIGYF2	SMC1A	1	1
GIGYF2	SMC3	1	1
GIGYF2	STAG2	1	1
GIGYF2	TET2	1	1
GIGYF2	TP53	1	1
GIGYF2	U2AF1	1	1
GIGYF2	WT1	1	1
GIGYF2	11q-Amp	1	1
GIGYF2	21q-Amp	1	1
GIGYF2	22q-Amp	1	1
GIGYF2	8p-Amp	1	1
GIGYF2	17p-Del	1	1
GIGYF2	5q-Del	1	1
GIGYF2	7p-Del	1	1
GIGYF2	7q-Del	1	1
GIGYF2	Amp_1p33	1	1
GIGYF2	Amp_11q23.3	1	1
GIGYF2	Amp_21q22.2	1	1
GIGYF2	Del_5q31.2	1	1
GIGYF2	Del_7p12.1	1	1
GIGYF2	Del_7q32.3	1	1
GIGYF2	Del_12p13.2	1	1
GIGYF2	Del_16q23.1	1	1
GIGYF2	Del_17q11.2	1	1
GIGYF2	Del_18p11.21	1	1
IDH1	KRAS	1	1
IDH1	PHF6	1	1
IDH1	RAD21	1	1
IDH1	SMC3	1	1
IDH1	STAG2	1	1
IDH1	TP53	1	1
IDH1	11q-Amp	1	1
IDH1	22q-Amp	1	1
IDH1	17p-Del	1	1
IDH1	5q-Del	1	1
IDH1	Del_5q31.2	1	1
IDH1	Del_12p13.2	1	1
IDH1	Del_16q23.1	1	1
IDH1	Del_17q11.2	1	1
IDH1	Del_18p11.21	1	1
IDH2	KIT	1	1
IDH2	NPM1	1	1
IDH2	NRAS	1	1
IDH2	PTPN11	1	1
IDH2	RAD21	1	1
IDH2	SMC1A	1	1
IDH2	SMC3	1	1
IDH2	TET2	1	1
IDH2	TP53	1	1
IDH2	11q-Amp	1	1
IDH2	22q-Amp	1	1
IDH2	17p-Del	1	1
IDH2	5q-Del	1	1
IDH2	Del_5q31.2	1	1
IDH2	Del_12p13.2	1	1
IDH2	Del_16q23.1	1	1
IDH2	Del_17q11.2	1	1
IDH2	Del_18p11.21	1	1
KIT	KRAS	1	1
KIT	NRAS	1	1
KIT	PHF6	1	1
KIT	PTPN11	1	1
KIT	RAD21	1	1
KIT	RUNX1	1	1
KIT	SMC1A	1	1
KIT	SMC3	1	1
KIT	STAG2	1	1
KIT	TP53	1	1
KIT	U2AF1	1	1
KIT	11q-Amp	1	1
KIT	21q-Amp	1	1
KIT	22q-Amp	1	1
KIT	8p-Amp	1	1
KIT	8q-Amp	1	1
KIT	17p-Del	1	1
KIT	5q-Del	1	1
KIT	7p-Del	1	1
KIT	7q-Del	1	1
KIT	Amp_1p33	1	1
KIT	Amp_11q23.3	1	1
KIT	Amp_21q22.2	1	1
KIT	Del_7p12.1	1	1
KIT	Del_12p13.2	1	1
KIT	Del_16q23.1	1	1
KIT	Del_17q11.2	1	1
KIT	Del_18p11.21	1	1
KRAS	NRAS	1	1
KRAS	PHF6	1	1
KRAS	PTPN11	1	1
KRAS	RAD21	1	1
KRAS	SMC1A	1	1
KRAS	SMC3	1	1
KRAS	STAG2	1	1
KRAS	TP53	1	1
KRAS	WT1	1	1
KRAS	11q-Amp	1	1
KRAS	22q-Amp	1	1
KRAS	5q-Del	1	1
KRAS	Amp_1p33	1	1
KRAS	Amp_11q23.3	1	1
KRAS	Del_5q31.2	1	1
KRAS	Del_16q23.1	1	1
KRAS	Del_17q11.2	1	1
KRAS	Del_18p11.21	1	1
NPM1	RUNX1	1	1
NPM1	TP53	1	1
NPM1	U2AF1	1	1
NPM1	11q-Amp	1	1
NPM1	21q-Amp	1	1
NPM1	22q-Amp	1	1
NPM1	17p-Del	1	1
NPM1	5q-Del	1	1
NPM1	7p-Del	1	1
NPM1	7q-Del	1	1
NPM1	Amp_1p33	1	1
NPM1	Amp_11q23.3	1	1
NPM1	Amp_21q22.2	1	1
NPM1	Del_5q31.2	1	1
NPM1	Del_7p12.1	1	1
NPM1	Del_12p13.2	1	1
NPM1	Del_16q23.1	1	1
NPM1	Del_17q11.2	1	1
NPM1	Del_18p11.21	1	1
NRAS	PHF6	1	1
NRAS	SMC1A	1	1
NRAS	21q-Amp	1	1
NRAS	22q-Amp	1	1
NRAS	Del_18p11.21	1	1
PHF6	RAD21	1	1
PHF6	SMC1A	1	1
PHF6	STAG2	1	1
PHF6	TET2	1	1
PHF6	TP53	1	1
PHF6	11q-Amp	1	1
PHF6	21q-Amp	1	1
PHF6	22q-Amp	1	1
PHF6	17p-Del	1	1
PHF6	5q-Del	1	1
PHF6	7p-Del	1	1
PHF6	7q-Del	1	1
PHF6	Amp_1p33	1	1
PHF6	Amp_11q23.3	1	1
PHF6	Amp_21q22.2	1	1
PHF6	Del_5q31.2	1	1
PHF6	Del_7p12.1	1	1
PHF6	Del_7q32.3	1	1
PHF6	Del_16q23.1	1	1
PHF6	Del_18p11.21	1	1
PTPN11	RAD21	1	1
PTPN11	RUNX1	1	1
PTPN11	TET2	1	1
PTPN11	U2AF1	1	1
PTPN11	21q-Amp	1	1
PTPN11	22q-Amp	1	1
PTPN11	8p-Amp	1	1
PTPN11	8q-Amp	1	1
PTPN11	17p-Del	1	1
PTPN11	5q-Del	1	1
PTPN11	Amp_1p33	1	1
PTPN11	Amp_21q22.2	1	1
PTPN11	Del_16q23.1	1	1
RAD21	RUNX1	1	1
RAD21	SMC1A	1	1
RAD21	SMC3	1	1
RAD21	STAG2	1	1
RAD21	TET2	1	1
RAD21	TP53	1	1
RAD21	U2AF1	1	1
RAD21	WT1	1	1
RAD21	11q-Amp	1	1
RAD21	21q-Amp	1	1
RAD21	22q-Amp	1	1
RAD21	8p-Amp	1	1
RAD21	8q-Amp	1	1
RAD21	17p-Del	1	1
RAD21	5q-Del	1	1
RAD21	7p-Del	1	1
RAD21	7q-Del	1	1
RAD21	Amp_1p33	1	1
RAD21	Amp_21q22.2	1	1
RAD21	Del_5q31.2	1	1
RAD21	Del_7p12.1	1	1
RAD21	Del_7q32.3	1	1
RAD21	Del_12p13.2	1	1
RAD21	Del_16q23.1	1	1
RAD21	Del_17q11.2	1	1
RAD21	Del_18p11.21	1	1
RUNX1	SMC1A	1	1
RUNX1	TP53	1	1
RUNX1	11q-Amp	1	1
RUNX1	22q-Amp	1	1
RUNX1	17p-Del	1	1
RUNX1	5q-Del	1	1
RUNX1	7p-Del	1	1
RUNX1	7q-Del	1	1
RUNX1	Amp_1p33	1	1
RUNX1	Del_5q31.2	1	1
RUNX1	Del_7p12.1	1	1
RUNX1	Del_7q32.3	1	1
RUNX1	Del_16q23.1	1	1
RUNX1	Del_18p11.21	1	1
SMC1A	SMC3	1	1
SMC1A	STAG2	1	1
SMC1A	TP53	1	1
SMC1A	U2AF1	1	1
SMC1A	11q-Amp	1	1
SMC1A	21q-Amp	1	1
SMC1A	22q-Amp	1	1
SMC1A	17p-Del	1	1
SMC1A	5q-Del	1	1
SMC1A	7p-Del	1	1
SMC1A	7q-Del	1	1
SMC1A	Amp_11q23.3	1	1
SMC1A	Amp_21q22.2	1	1
SMC1A	Del_5q31.2	1	1
SMC1A	Del_7p12.1	1	1
SMC1A	Del_7q32.3	1	1
SMC1A	Del_12p13.2	1	1
SMC1A	Del_16q23.1	1	1
SMC1A	Del_17q11.2	1	1
SMC1A	Del_18p11.21	1	1
SMC3	STAG2	1	1
SMC3	11q-Amp	1	1
SMC3	21q-Amp	1	1
SMC3	7p-Del	1	1
SMC3	7q-Del	1	1
SMC3	Amp_1p33	1	1
SMC3	Amp_11q23.3	1	1
SMC3	Del_7p12.1	1	1
SMC3	Del_7q32.3	1	1
SMC3	Del_12p13.2	1	1
SMC3	Del_18p11.21	1	1
STAG2	TP53	1	1
STAG2	U2AF1	1	1
STAG2	11q-Amp	1	1
STAG2	21q-Amp	1	1
STAG2	22q-Amp	1	1
STAG2	17p-Del	1	1
STAG2	5q-Del	1	1
STAG2	7p-Del	1	1
STAG2	7q-Del	1	1
STAG2	Amp_1p33	1	1
STAG2	Amp_21q22.2	1	1
STAG2	Del_5q31.2	1	1
STAG2	Del_7p12.1	1	1
STAG2	Del_7q32.3	1	1
STAG2	Del_12p13.2	1	1
STAG2	Del_16q23.1	1	1
STAG2	Del_17q11.2	1	1
STAG2	Del_18p11.21	1	1
TET2	WT1	1	1
TET2	Del_12p13.2	1	1
TET2	Del_16q23.1	1	1
TET2	Del_18p11.21	1	1
TP53	U2AF1	1	1
TP53	WT1	1	1
U2AF1	WT1	1	1
U2AF1	11q-Amp	1	1
U2AF1	21q-Amp	1	1
U2AF1	22q-Amp	1	1
U2AF1	17p-Del	1	1
U2AF1	5q-Del	1	1
U2AF1	Amp_1p33	1	1
U2AF1	Amp_11q23.3	1	1
U2AF1	Amp_21q22.2	1	1
U2AF1	Del_5q31.2	1	1
U2AF1	Del_12p13.2	1	1
U2AF1	Del_16q23.1	1	1
U2AF1	Del_17q11.2	1	1
U2AF1	Del_18p11.21	1	1
WT1	11q-Amp	1	1
WT1	21q-Amp	1	1
WT1	22q-Amp	1	1
WT1	17p-Del	1	1
WT1	5q-Del	1	1
WT1	Amp_1p33	1	1
WT1	Amp_21q22.2	1	1
WT1	Del_5q31.2	1	1
WT1	Del_12p13.2	1	1
WT1	Del_16q23.1	1	1
WT1	Del_18p11.21	1	1
11q-Amp	21q-Amp	1	1
11q-Amp	Amp_21q22.2	1	1
21q-Amp	17p-Del	1	1
21q-Amp	7p-Del	1	1
21q-Amp	Amp_1p33	1	1
21q-Amp	Amp_11q23.3	1	1
21q-Amp	Del_7p12.1	1	1
21q-Amp	Del_17q11.2	1	1
22q-Amp	7p-Del	1	1
22q-Amp	7q-Del	1	1
22q-Amp	Del_7q32.3	1	1
22q-Amp	Del_12p13.2	1	1
22q-Amp	Del_16q23.1	1	1
17p-Del	Amp_1p33	1	1
5q-Del	Amp_1p33	1	1
7p-Del	Amp_21q22.2	1	1
Amp_1p33	Amp_21q22.2	1	1
Amp_11q23.3	Amp_21q22.2	1	1
Amp_21q22.2	Del_7p12.1	1	1
Del_16q23.1	Del_17q11.2	1	1
TP53	5q-Del	1.03e-05	1
Del_5q31.2	Del_18p11.21	1.17e-07	1
7p-Del	Del_12p13.2	1.43e-05	1
17p-Del	Del_5q31.2	1.65e-06	1
TP53	22q-Amp	1.8e-06	1
7p-Del	Del_7q32.3	2.11e-13	1
Del_5q31.2	Del_7q32.3	2.37e-05	1
Del_7p12.1	Del_12p13.2	2.41e-05	1
7p-Del	7q-Del	2.41e-15	1
Del_7p12.1	Del_7q32.3	2.43e-12	1
5q-Del	Del_5q31.2	2.49e-07	1
7q-Del	Del_7p12.1	2.84e-14	1
TP53	Amp_21q22.2	3.29e-06	1
TP53	11q-Amp	3.44e-05	1
7q-Del	Del_5q31.2	3.69e-05	1
8p-Amp	8q-Amp	4.03e-22	1
7q-Del	Del_12p13.2	5.92e-05	1
21q-Amp	Amp_21q22.2	6.27e-10	1
7p-Del	Del_7p12.1	7.94e-17	1
TP53	Del_5q31.2	8.29e-15	1
7q-Del	Del_7q32.3	8.69e-18	1
TP53	Del_17q11.2	8.76e-05	1
TP53	Del_18p11.21	8.76e-05	1
11q-Amp	Amp_11q23.3	9.06e-09	1
Amp_21q22.2	Del_5q31.2	9.45e-06	1
Del_12p13.2	Del_18p11.21	9.86e-05	1
