index	chromosome	region_start	region_end	peak_start	peak_end	enlarged_peak_start	enlarged_peak_end	n_genes_in_region	genes_in_region	n_genes_in_peak	genes_in_peak	n_genes_on_chip	genes_on_chip	top 3
1	1	233673389	238224378	235087357	235089730	235078957	235097307	0	[RN7SL668P]	0	[RN7SL668P]	
2	1	10580516	11238416	10876600	10905807	10687726	11065971	3	PEX14,CASZ1,C1orf127,	0	[CASZ1]	
3	1	149881398	174160343	150600181	150621176	149898951	152178286	78	NBPF18P,THEM4,LINGO4,CELF3,MIR554,SNORA44,RNY4P25,RN7SL444P,MLLT11,SNORA40|ENSG00000253047.1,RN7SL600P,RN7SL473P,C1orf138,LINC00568,snoU13|ENSG00000238526.1,RN7SL480P,OTUD7B,ARNT,CTSK,CTSS,ECM1,ENSA,MCL1,PI4KB,PSMB4,PSMD4,RFX5,RORC,S100A10,S100A11,VPS72,TCHH,TUFT1,PIP5K1A,ANXA9,SELENBP1,PRPF3,SETDB1,SF3B4,SEMA6C,MTMR11,TDRKH,VPS45,POGZ,RPRD2,CA14,TMOD4,CERS2,APH1A,PLEKHO1,OAZ3,MRPS21,ADAMTSL4,C1orf56,GOLPH3L,FAM63A,CDC42SE1,CGN,ZNF687,PRUNE,MRPL9,SCNM1,TNFAIP8L2,C1orf54,TARS2,SNX27,ANP32E,HORMAD1,GABPB2,TCHHL1,RPTN,C1orf51,BNIPL,RIIAD1,THEM5,LYSMD1,C2CD4D,MIR4257,	2	ENSA,GOLPH3L,	
4	1	40266102	40780794	40473508	40495326	40264332	40771994	9	COL9A2,MYCL,PPT1,RLF,ZMPSTE24,CAP1,TRIT1,MFSD2A,TMCO2,	0	[CAP1]	
5	2	106154642	106830484	106535262	106592564	105735837	106853546	7	C2orf49,FHL2,NCK2,TGFBRAP1,GPR45,UXS1,C2orf40,	0	[NCK2]	
6	3	136109512	197538677	169490229	169494053	169486732	169497676	2	MYNN,ACTRT3,	2	MYNN,ACTRT3,	
7	5	914233	4646633	914233	919520	914233	1287540	22	MIR4635,ZDHHC11B,CCDC127,LRRC14B,PLEKHG4B,SDHA,SLC9A3,TERT,TRIP13,PDCD6,SLC12A7,TPPP,EXOC3,CEP72,AHRR,BRD9,ZDHHC11,NKD2,C5orf55,SLC6A19,SLC6A18,MIR4456,	16	ZDHHC11B,CCDC127,LRRC14B,PLEKHG4B,SDHA,SLC9A3,TRIP13,PDCD6,TPPP,EXOC3,CEP72,AHRR,BRD9,ZDHHC11,C5orf55,MIR4456,	
8	5	35616027	50133376	40486896	40526520	38169401	44521494	38	FGF10,CCL28,ANXA2R,SNORD72,RPL37,SNORA57|ENSG00000212567.1,SNORA63|ENSG00000199552.1,LINC00604,LINC00603,C6,C7,C9,DAB2,FYB,GHR,HMGCS1,LIFR,OXCT1,PRKAA1,PTGER4,SEPP1,ZNF131,OSMR,PAIP1,NNT,TTC33,FBXO4,C5orf28,CARD6,MROH2B,EGFLAM,NIM1,RICTOR,C5orf51,PLCXD3,C5orf34,CCDC152,MIR3650,	0	[SNORA63|ENSG00000199552.1]	
9	6	37518241	62234535	43880667	43883259	43847056	43924212	0	[C6orf223]	0	[C6orf223]	
10	6	107061444	107360290	107129976	107166555	107120530	107221059	1	QRSL1,	0	[QRSL1]	
11	6	63875254	64568888	64135165	64154037	64042455	64323654	1	PTP4A1,	0	[PTP4A1]	
12	7	81596813	108207065	92235038	92241005	91842992	92616501	8	RN7SL7P,GATAD1,KRIT1,CDK6,PEX1,ANKIB1,RBM48,FAM133B,	1	CDK6,	
13	7	52830858	57921704	55277964	55313378	55039957	55367522	1	EGFR,	1	EGFR,	
14	7	708774	9283887	1522849	1540635	708774	7888519	90	RPA3,PMS2CL,GRID2IP,FLJ20306,RN7SL851P,SNORA42|ENSG00000207217.1,RN7SL556P,ZNF815P,MIR589,snoU13|ENSG00000238394.1,ZNF890P,RNF216P1,AP5Z1,snoU13|ENSG00000238781.1,RN7SKP130,snoU13|ENSG00000238857.1,MIR4648,GRIFIN,MIR4655,ELFN1,UNCX,MIR339,COX19,FAM20C,ACTB,GNA12,GPER,LFNG,NUDT1,PDGFA,PMS2,PRKAR1B,RAC1,FSCN1,ZNF12,AIMP2,MAFK,MAD1L1,EIF3B,CYTH3,KDELR2,ADAP1,IQCE,SUN1,WIPI2,INTS1,EIF2AK1,SNX8,FTSJ2,GET4,CCZ1,MIOS,RNF216,ZNF853,CYP2W1,HEATR2,ZDHHC4,CHST12,RADIL,PAPOLB,C1GALT1,RBAK,C7orf26,MICALL2,FBXL18,TTYH3,USP42,PSMG3,C7orf50,CARD11,TNRC18,FAM220A,ZFAND2A,GPR146,AMZ1,TMEM184A,BRAT1,SDK1,FOXK1,MMD2,DAGLB,CCZ1B,SLC29A4,RSPH10B,COL28A1,OCM,RSPH10B2,ANKRD61,MIR3683,MIR4656,	1	INTS1,	
15	8	93020897	145232496	128716879	128722935	128714853	128724426	0	[MYC]	0	[MYC]	
16	8	8661534	13838468	11569799	11577869	11384841	11644821	5	C8orf49,LINC00208,BLK,GATA4,NEIL2,	1	GATA4,	
17	8	41204825	47464065	42393928	42419796	42155830	42606359	8	CHRNB3,IKBKB,POLB,SLC20A2,VDAC3,CHRNA6,DKK4,SMIM19,	2	SLC20A2,SMIM19,	
18	9	32911456	36689818	35615644	35639629	35533886	35696625	12	RN7SL22P,RMRP,MIR4667,CA9,CD72,TESK1,TPM2,RUSC2,SIT1,ARHGEF39,CCDC107,FAM166B,	3	MIR4667,CD72,TESK1,	
19	9	139051872	140938752	140044414	140050267	139857912	140290821	36	RNF224,TMEM210,MIR3621,snoU13|ENSG00000238824.1,SNORD62,CLIC3,C9orf141,ABCA2,ENTPD2,FUT7,GRIN1,PTGDS,SSNA1,TUBB4B,MAN1B1,NELFB,NDOR1,ANAPC2,DPP7,TOR4A,EXD3,NPDC1,SAPCD2,UAP1L1,TMEM203,SLC34A3,C9orf142,TPRN,C9orf169,LRRC26,LCNL1,C9orf139,FAM166A,C9orf173,NRARP,RNF208,	1	GRIN1,	
20	9	4772328	5742450	5564748	5603231	4764210	5742401	10	INSL4,JAK2,RLN1,RLN2,RCL1,INSL6,CD274,PLGRKT,KIAA1432,PDCD1LG2,	3	CD274,PLGRKT,PDCD1LG2,	
21	10	122684525	123949079	123240578	123310025	122753657	123424686	2	RN7SKP167,FGFR2,	1	FGFR2,	
22	10	32320182	32538504	32421128	32440103	31857752	34251729	11	LINC00838,RN7SL398P,RN7SL847P,CCDC7,RN7SL825P,ITGB1,KIF5B,NRP1,C10orf68,EPC1,ARHGAP12,	0	[KIF5B]	
23	10	76485165	77572804	77018326	77021208	76481311	77568363	9	MIR606,VDAC2,KAT6B,DUSP13,C10orf11,ZNF503,COMTD1,SAMD8,DUPD1,	0	[COMTD1]	
24	11	66209491	80627680	69460023	69487548	69413010	69594005	4	CCND1,FGF4,FGF19,ORAOV1,	2	CCND1,ORAOV1,	
25	11	33551277	36952099	35244574	35256693	35244058	35259407	1	CD44,	1	CD44,	
26	12	21952545	30288932	25386944	25402069	25344325	25513944	3	KRAS,CASC1,LYRM5,	1	KRAS,	
27	12	64150825	72680201	69728786	69743392	69542292	69978623	5	RN7SL804P,LYZ,YEATS4,FRS2,CPSF6,	1	LYZ,	
28	13	73548118	74424950	73817608	73825334	73726052	73872614	1	RNY1P8,	0	[RNY1P8]	
29	13	31508724	32057814	31935616	31989640	30756131	35809794	29	LINC00457,SNORA25|ENSG00000199196.1,LINC00423,RNY1P4,SNORA16|ENSG00000212293.1,ZAR1L,EEF1DP3,LINC00545,LINC00398,LINC00426,LINC00427,ALOX5AP,BRCA2,HMGB1,RFC3,KL,FRY,USPL1,N4BP2L2,HSPH1,PDS5B,NBEA,KATNAL1,MEDAG,STARD13,N4BP2L1,RXFP2,TEX26,B3GALTL,	0	[B3GALTL]	
30	14	37560320	38272445	37688945	37711690	35799115	39056522	23	LINC00517,SNORA42|ENSG00000200385.1,TTC6,MIR4503,SLC25A21,RN7SKP257,DPPA3P2,RN7SKP21,PTCSC3,snoU13|ENSG00000238718.1,SNORA31|ENSG00000253059.1,FOXA1,NFKBIA,PAX9,SSTR1,MBIP,BRMS1L,INSM2,MIPOL1,CLEC14A,RALGAPA1,SFTA3,LINC00609,	1	MIPOL1,	
31	15	88075239	101884307	90692798	90692798	90664054	90703571	1	RN7SL755P,	0	[SEMA4B]	
32	17	34935435	40462620	37861388	37861388	37855834	37875909	1	ERBB2,	1	ERBB2,	
33	18	18689747	22875698	19633744	19638310	19614326	19676355	0	[RNU6ATAC20P]	0	[RNU6ATAC20P]	
34	18	992591	1564895	1183140	1187332	985108	1566468	2	RN7SKP72,LINC00470,	0	[LINC00470]	
35	19	28240494	33475123	30307115	30307451	30299993	30315735	1	CCNE1,	1	CCNE1,	
36	19	58085699	58878226	58865394	58866434	58675894	58878226	24	RN7SL525P,RN7SL693P,RNA5SP473,A1BG,RPS5,ZNF8,MZF1,ZNF132,UBE2M,TRIM28,ZNF274,SLC27A5,ZNF324,CHMP2A,ZNF544,ZNF446,RPL23AP79,ZBTB45,ZNF837,ZNF497,ZNF584,ZSCAN22,ZNF324B,MIR4754,	1	ZNF497,	
37	20	45578378	54065151	52341686	52359551	52172614	52384462	1	ZNF217,	0	[ZNF217]	
38	X	139864882	154905589	153063853	153071518	151843349	153781435	101	F8A3,F8A2,FUNDC2,SNORA56,SNORA36A,RN7SL742P,RN7SL697P,LAGE3,SNORA70|ENSG00000207165.1,TEX28P1,OPN1MW,TEX28P2,NAA10,LCA10,SNORD36|ENSG00000251846.1,RN7SL687P,RN7SL667P,snoU13|ENSG00000239037.1,PNMA6B,PNMA6D,PNMA6A,RN7SL190P,CETN2,CSAG2,CSAG4,MAGEA2B,CSAG3,ABCD1,ARHGAP4,ATP2B3,ATP6AP1,AVPR2,BGN,CLIC2,CTAG1B,TEX28,DKC1,DNASE1L1,DUSP9,EMD,F8,FLNA,G6PD,GDI1,HCFC1,IDH3G,IRAK1,L1CAM,MAGEA1,MAGEA2,MAGEA3,MAGEA6,MAGEA12,MECP2,MPP1,MTCP1,PLXNB3,OPN1LW,RENBP,RPL10,SLC6A8,SSR4,TAZ,VBP1,ZNF185,F8A1,UBL4A,TMEM187,SLC10A3,TKTL1,IKBKG,FAM50A,BCAP31,ZNF275,TREX2,SRPK3,PNMA3,CTAG2,NSDHL,TMLHE,PLXNA3,HAUS7,PDZD4,FAM3A,BRCC3,H2AFB3,FAM58A,PNMA5,RAB39B,GAB3,PNCK,ZFP92,CSAG1,CTAG1A,H2AFB2,H2AFB1,OPN1MW2,SMIM9,CMC4,PNMA6C,MIR718,	2	SSR4,PDZD4,	
