Hybridization REF p difference q subclass Composite Element REF p difference q subclass FN1|FIBRONECTIN 0.0160677832703803 1.26103033461538 0.118654399535116 1 RAD51|RAD51 0.000393269612990597 0.805420318019231 0.0188769414235487 1 SYK|SYK 0.0215750100307877 0.796485141019231 0.119610472279099 1 LCK|LCK 0.000245997457674622 0.609792429076923 0.0157438372911758 1 ANXA1|ANNEXIN-1 0.0170319674426279 0.557389674211539 0.119610472279099 1 HSPA1A|HSP70 0.00637486256826284 0.534232151923077 0.0764983508191541 1 COL6A1|COLLAGEN_VI 0.0062437562467784 0.505711620538462 0.0764983508191541 1 NFKB1|NF-KB-P65_PS536 0.00117287867657524 0.457181498134615 0.0375321176504077 1 CASP7|CASPASE-7_CLEAVEDD198 0.00568438677454934 0.349127997836538 0.0764983508191541 1 STMN1|STATHMIN 0.00306377303505323 0.343906311144231 0.0653604914144689 1 C12ORF5|TIGAR 0.0114789035180906 0.280549894125 0.11019747377367 1 MAP2K1|MEK1_PS217_S221 0.0204714952081562 0.276202071384615 0.119610472279099 1 EIF4EBP1|4E-BP1_PT70 0.0224269635523311 0.268812869855769 0.119610472279099 1 WWTR1|TAZ 0.0018410135215118 0.25805644675 0.0504963708757522 1 RPS6KA1|P90RSK_PT359_S363 0.0203518436839042 0.242565326817308 0.119610472279099 1 BID|BID 0.00775292792650934 0.241659212932692 0.0875624801111643 1 PIK3R1|PI3K-P85 0.0214472457955488 0.237793047538462 0.119610472279099 1 ACVRL1|ACVRL1 0.0275679952906572 0.234826181144231 0.126025121328719 1 RICTOR|RICTOR_PT1135 0.0190300667910262 0.208993270269231 0.119610472279099 1 CDH2|N-CADHERIN 0.0246017406164114 0.201638369432692 0.125264005285997 1 MRE11A|MRE11 0.0113187521862819 0.193980366519231 0.11019747377367 1 BRCA2|BRCA2 0.00483948898988649 0.178502632826923 0.0743075183674643 1 CHEK2|CHK2_PT68 0.0427257540113629 0.154619446836538 0.168948024947265 1 CDC2|CDK1 0.0431169438667499 -0.126251555163461 0.168948024947265 1 ERRFI1|MIG-6 0.0444548474129976 -0.156481930067308 0.170706614065911 1 PIK3CA |PI3K-P110-ALPHA 0.0267490844621139 -0.203606829028846 0.125264005285997 1 SCD1|SCD1 0.0194204708060498 -0.246065845923077 0.119610472279099 1 PARK7|DJ-1 0.00395237152262075 -0.26891012225 0.0743075183674643 1 FRAP1|MTOR 0.0316422592136293 -0.273168114144231 0.135006972644818 1 SHC1|SHC_PY317 3.1454973783043e-05 -0.282339949567308 0.00301967748317213 1 PRKAA1|AMPK_ALPHA 0.0147971187222079 -0.28671039025 0.118654399535116 1 MSH2|MSH2 0.00440495950800023 -0.325763140038462 0.0743075183674643 1 CCNE2|CYCLIN_E2 0.00953315200078637 -0.329577271990385 0.101686954675055 1 RPS6|S6 0.0124077582491295 -0.342964224384615 0.113442361134898 1 XRCC5|KU80 0.0156449564289656 -0.348219098057692 0.118654399535116 1 MSH6|MSH6 0.0311894744080105 -0.358767491144231 0.135006972644818 1 PKC|PKC-PAN_BETAII_PS660 0.0149162069615723 -0.378592971163462 0.118654399535116 1 BAP1|BAP1C-4 0.0258470030904762 -0.380234548567308 0.125264005285997 1 EEF2|EEF2 1.61136177689055e-05 -0.386349542682692 0.00301967748317213 1 ERCC1|ERCC1 0.0399011607404493 -0.387285855211538 0.163000486429069 1 TTF1|TTF1 0.00503123822279706 -0.390204860644231 0.0743075183674643 1 BRAF|B-RAF 0.0285754405120431 -0.400408096567308 0.127592664611913 1 EGFR|EGFR_PY1068 0.0332152020366197 -0.402591028596154 0.138637365022413 1 CDH1|E-CADHERIN 0.0264545033531287 -0.481392169423077 0.125264005285997 1 TSC2|TUBERIN 0.0182174900616787 -0.503679518192308 0.119610472279099 1 ACACA ACACB|ACC_PS79 0.00266517809949787 -0.522653300394231 0.0639642743879489 1 TP53BP1|53BP1 0.0218670345712495 -0.576398489173077 0.119610472279099 1 EEF2K|EEF2K 0.0260454062962908 -0.581938557576923 0.125264005285997 1 GATA3|GATA3 0.0135887969023375 -0.733770383519231 0.118593136602218 1 FASN|FASN 0.000557402060207108 -1.00068692125962 0.0214042391119529 1 FASN|FASN 0.0272581270188909 1.0805192073101 0.123162832583141 2 GSK3A GSK3B|GSK3-ALPHA-BETA_PS21_S9 1.43184820336558e-05 0.953191755665865 0.000916382850153971 2 PDCD4|PDCD4 0.0108975110826303 0.891881090348558 0.0721490388918972 2 GSK3A GSK3B|GSK3_PS9 0.00010085664743189 0.789170998685096 0.00387289526138458 2 AKT1 AKT2 AKT3|AKT_PS473 0.00419241085951116 0.760832446704327 0.0390007629880453 2 CDKN1A|P21 0.000291830220946369 0.700257534665865 0.00560314024217028 2 AKT1 AKT2 AKT3|AKT 0.0311413419773747 0.602500100579327 0.132869725770132 2 ACACA ACACB|ACC_PS79 0.000266912153952946 0.586057138771635 0.00560314024217028 2 ACACA|ACC1 0.00501279701177452 0.585145016887019 0.041845957663509 2 MAPK14|P38_PT180_Y182 0.0232963183005017 0.562323949723558 0.123162832583141 2 YAP1|YAP_PS127 0.0275833427139326 0.543630147194711 0.123162832583141 2 PTEN|PTEN 0.00426570845181745 0.520152524146635 0.0390007629880453 2 PKC|PKC-PAN_BETAII_PS660 0.0162487833344384 0.495588532742788 0.0974927000066304 2 AKT1 AKT2 AKT3|AKT_PT308 0.0332428098218303 0.485724498012019 0.135800414591307 2 CTNNB2|BETA-CATENIN 0.036589830291041 0.47712127815625 0.143372396242446 2 TSC2|TUBERIN 0.0131230875301249 0.433124157329327 0.0839877601927994 2 BAD|BAD_PS112 7.87021463218735e-05 0.412033459838942 0.00377770302344993 2 RPS6|S6_PS240_S244 0.0212665848601603 0.339174006963942 0.120093655680905 2 PRKAA1|AMPK_ALPHA 0.00911816662233297 0.256556283733173 0.0625245711245689 2 AKT1S1|PRAS40_PT246 0.00396493508483089 0.244632280877404 0.0390007629880453 2 FRAP1|MTOR_PS2448 0.00188549004456987 0.24275306903125 0.0212949463857303 2 EEF2|EEF2 0.0348409212852018 0.219826603079327 0.139363685140807 2 TSC2|TUBERIN_PT1462 0.000211697037546096 0.219152853021635 0.00560314024217028 2 XRCC5|KU80 0.0286170605472222 0.153378038512019 0.124874446024242 2 CDKN1B|P27_PT198 0.0457419490978107 -0.0672567481899039 0.168893350514993 2 XRCC1|XRCC1 0.0268974057576772 -0.0713417611322116 0.123162832583141 2 MS4A1|CD20 0.0229790910170805 -0.0773342369495193 0.123162832583141 2 RAF1|C-RAF_PS338 0.0169934693015718 -0.0830664794206731 0.0988710941182359 2 BECN1|BECLIN 0.0144479064260729 -0.105005756084135 0.0894838075421289 2 MAP2K1|MEK1_PS217_S221 0.0275329710893514 -0.118127486295673 0.123162832583141 2 STK11|LKB1 0.00832480043138985 -0.118440835911058 0.0591985808454389 2 MRE11A|MRE11 0.000532861133122116 -0.121708073689904 0.00852577812995386 2 ACVRL1|ACVRL1 0.0259217792950331 -0.13773122071875 0.123162832583141 2 YWHAB|14-3-3_BETA 0.00169711688485279 -0.145460865824519 0.0203654026182335 2 BRCA2|BRCA2 0.00237446606029024 -0.147978182516827 0.0253276379764292 2 PGR|PR 0.00106128805169399 -0.147998557305288 0.014554807566089 2 SMAD3|SMAD3 0.000172121179702602 -0.15869629859375 0.00550787775048326 2 BAK1|BAK 0.00527877081563423 -0.160426247161058 0.0422301665250738 2 INPP4B|INPP4B 0.0420903787148987 -0.162424712689904 0.161627054265211 2 CDH2|N-CADHERIN 0.0260415076025234 -0.180085884564904 0.123162832583141 2 ETS1|ETS-1 1.47146040713457e-06 -0.196084437612981 0.000168010732903146 2 CHEK2|CHK2_PT68 0.000326555901444341 -0.201431468295673 0.00569988482521032 2 CDH3|P-CADHERIN 0.0329514882773312 -0.203813108795673 0.135800414591307 2 CHEK1|CHK1 0.0445839667729368 -0.221396034151442 0.167845521968703 2 CASP7|CASPASE-7_CLEAVEDD198 0.000247248736106161 -0.241491213439904 0.00560314024217028 2 BIRC2 |CIAP 0.0267627735930673 -0.243549075334135 0.123162832583141 2 NRG1|HEREGULIN 0.00586026674828238 -0.273942214141827 0.0450068486268087 2 STMN1|STATHMIN 1.75011180107444e-06 -0.282270899132212 0.000168010732903146 2 TGM2|TRANSGLUTAMINASE 0.00483712852663299 -0.299959390141827 0.041845957663509 2 HSPA1A|HSP70 0.00658833756718309 -0.352572264805288 0.0486523389576597 2 LCK|LCK 0.0013494456121719 -0.379301795641827 0.0172729038358003 2 RAD51|RAD51 0.000918695673306547 -0.49550600859375 0.0135684284057582 2 PRKCA |PKC-ALPHA_PS657 0.000193303814018339 1.5291339588726 0.00742286645830422 3 PRKCA |PKC-ALPHA 0.000150837383509847 1.19006391932452 0.00724019440847266 3 CDH1|E-CADHERIN 0.00299469092592712 0.840832274055288 0.0258729137830744 3 PRKCD|PKC-DELTA_PS664 0.00086353083769485 0.744474542334135 0.013710759056133 3 VHL|VHL 0.00130393180595031 0.66590999459375 0.0144827297110801 3 RPS6KB1|P70S6K_PT389 0.00012489182344082 0.574179020478365 0.00724019440847266 3 STAT5A|STAT5-ALPHA 0.0407990138163224 0.561903446353365 0.146399061581793 3 TTF1|TTF1 0.00674568969943309 0.53314515046875 0.0462561579389698 3 TP53|P53 0.00340929921484192 0.479794744939904 0.0272743937187354 3 PRDX1|PRDX1 0.00135214998127741 0.450883390084135 0.0144827297110801 3 ESR1|ER-ALPHA 0.0133051664427263 0.435059508295673 0.0709608876945403 3 RAB25|RAB25 0.00964257842706611 0.427192272987981 0.0578554705623967 3 FOXO3|FOXO3A 0.00730687632047579 0.425030575430288 0.0483765604665983 3 PECAM1|CD31 0.0020539491535826 0.398848359997596 0.0195305451911616 3 CDH3|P-CADHERIN 0.0338234491347007 0.397903988661058 0.129882044677251 3 PREX1|PREX1 0.00861597528426209 0.309389009814904 0.0533634598251071 3 XBP1|XBP1 0.00484747572925705 0.307300395949519 0.0357967438468213 3 SCD1|SCD1 0.0021361533802833 0.303148413978365 0.0195305451911616 3 BCL2|BCL-2 0.0299366230241145 0.284209962103365 0.122294289800638 3 MYC|C-MYC 0.0147970989720024 0.27863358234375 0.0755400162746796 3 CDC2|CDK1 0.0493104260886819 0.267021031603365 0.16073694862776 3 SHC1|SHC_PY317 0.000999742847843033 0.246863382959135 0.013710759056133 3 ARHI|ARHI 0.029443604173119 0.226088005026442 0.122294289800638 3 NRAS|N-RAS 0.0117243058828886 0.20861629684375 0.064316192271846 3 CHEK1|CHK1_PS345 0.000621319474389449 0.167093969305288 0.0132548154536416 3 BAK1|BAK 0.0102912505088584 0.159438591997596 0.0598763665969943 3 YWHAB|14-3-3_BETA 0.000487453678587897 0.148481727007212 0.0116988882861095 3 PGR|PR 0.0356295497548796 0.138126895939904 0.134134775547782 3 MS4A1|CD20 0.0461145231605727 0.124836123747596 0.15533313064614 3 CDKN1B|P27_PT157 0.0151294670688548 0.121004850526442 0.0755400162746796 3 ESR1|ER-ALPHA_PS118 0.000957436206525333 0.0864993398725962 0.013710759056133 3 STK11|LKB1 0.0330391092279835 -0.140394236002404 0.129459366770874 3 MAP2K1|MEK1_PS217_S221 0.0153440658057943 -0.149677709223558 0.0755400162746796 3 EIF4EBP1|4E-BP1_PT70 0.0165786095643815 -0.15175601365625 0.0759169844758487 3 YAP1|YAP 0.0187168314310475 -0.164356961771635 0.0816734462445709 3 WWTR1|TAZ 0.00135775591041376 -0.179304926262019 0.0144827297110801 3 EIF4E|EIF4E 0.0308286267268714 -0.209844189694712 0.123314506907486 3 DVL3|DVL3 0.0158958822870717 -0.218645038012019 0.0759169844758487 3 BID|BID 0.00438603472301415 -0.221001179050481 0.0336847466727487 3 EIF4EBP1|4E-BP1_PS65 0.000248772682458125 -0.227793867175481 0.00796072583866 3 RPS6KB1|P70S6K 0.0280971219331012 -0.260021305002404 0.119881053581232 3 C12ORF5|TIGAR 0.0116121198268115 -0.286673472454327 0.064316192271846 3 GSK3A GSK3B|GSK3-ALPHA-BETA 0.0411747360698793 -0.289048224627404 0.146399061581793 3 RAF1|C-RAF 0.00660652046701515 -0.302236990060096 0.0462561579389698 3 TSC1|TSC1 0.0454087067725987 -0.312943711233173 0.15533313064614 3 KIT|C-KIT 0.0493931248387388 -0.320143699944712 0.16073694862776 3 RPS6|S6 0.0398260481058696 -0.327800365819712 0.146399061581793 3 COL6A1|COLLAGEN_VI 0.0170956895265872 -0.339415386060096 0.076334241607087 3 MYH9|MYOSIN-IIA-PS1943 0.0166068403540919 -0.406541766483173 0.0759169844758487 3 CCNB1|CYCLIN_B1 0.0449381541125844 -0.444447910973558 0.15533313064614 3 PTEN|PTEN 1.00467123435078e-05 -0.488908454060096 0.000964484384976749 3 MAPK1|ERK2 1.5948659365466e-06 -0.496675394262019 0.000306214259816947 3 RBM15|RBM15 0.00309935946359745 -0.530293692829327 0.0258729137830744 3 YAP1|YAP_PS127 0.0020166642441846 -0.670627713887019 0.0195305451911616 3 AKT1 AKT2 AKT3|AKT 0.00791902929468243 -0.755976867540865 0.0506817874859676 3 CTNNB2|BETA-CATENIN 0.00107220186426946 -0.793744013310096 0.0137241838626491 3 FASN|FASN 0.000839405982800196 -0.827883822194712 0.013710759056133 3 SERPINE1|PAI-1 0.000706592582826727 -0.934104162463942 0.0135665775902732 3 FN1|FIBRONECTIN 0.000316354634021243 -0.995400254877404 0.00867715567601124 3 CCNB1|CYCLIN_B1 0.0334499666783036 0.929752242425 0.176602294007692 4 CTNNB2|BETA-CATENIN 0.0070174105810806 0.761033002925 0.0863574661968371 4 CCNE1|CYCLIN_E1 0.000374324035910139 0.734075447658333 0.0239567382982489 4 FASN|FASN 0.0417752859237539 0.648311331325 0.183935738572702 4 RBM15|RBM15 0.0481595777560992 0.468968336325 0.183935738572702 4 EIF4G1|EIF4G 0.0478274536556864 0.423127105783333 0.183935738572702 4 TSC1|TSC1 0.0100829923904921 0.372722359483333 0.092036897328891 4 RPTOR|RAPTOR 0.0438910554251572 0.372531636358333 0.183935738572702 4 RPS6|S6 0.00448376358558267 0.369557017241667 0.0764045074945368 4 DVL3|DVL3 0.00689115772430874 0.364672795925 0.0863574661968371 4 GSK3A GSK3B|GSK3-ALPHA-BETA 0.00246161271137487 0.342703672491667 0.060049494898905 4 TSC2|TUBERIN 0.0308623868077056 0.334375949525 0.174281713737632 4 MAPK1|ERK2 0.0365246298088522 0.326177435566667 0.180905973334967 4 EEF2|EEF2 0.00196822363842608 0.300686229166667 0.060049494898905 4 YBX1|YB-1 0.0410714439324718 0.287415344466667 0.183935738572702 4 FRAP1|MTOR 0.0293537409625451 0.285328505066667 0.170785401963899 4 RPS6KB1|P70S6K 0.0175204405102234 0.280100230775 0.111301661947805 4 BAP1|BAP1C-4 0.00627179827301857 0.257170641616667 0.0863574661968371 4 RAF1|C-RAF 0.0378714640345659 0.227934067408333 0.180905973334967 4 CCNE2|CYCLIN_E2 0.0026832613128445 0.227699576175 0.060049494898905 4 SRC|SRC 0.045953871471374 0.192255444466667 0.183935738572702 4 EIF4EBP1|4E-BP1_PS65 0.0125037449876579 0.161643651258333 0.101091227902346 4 RAD50|RAD50 0.0481203107148008 0.122633348625 0.183935738572702 4 SMAD3|SMAD3 0.0105458944856021 0.11793958105 0.092036897328891 4 MET|C-MET_PY1235 0.00854579092572867 0.0796079799666667 0.0863574661968371 4 XRCC1|XRCC1 0.0496570272817418 0.0687428715583333 0.183935738572702 4 BRCA2|BRCA2 0.0328789856514133 -0.105524478125 0.176602294007692 4 RPS6KA1|P90RSK_PT359_S363 0.0340327337410657 -0.185360774366667 0.176602294007692 4 FRAP1|MTOR_PS2448 0.0164704135637183 -0.19670239705 0.111301661947805 4 PECAM1|CD31 0.0179705808353227 -0.203722541741667 0.111301661947805 4 ERBB2|HER2_PY1248 0.000239286582891095 -0.256760248016667 0.0229715119575451 4 PREX1|PREX1 0.0384335251151756 -0.265823776116667 0.180905973334967 4 BCL2|BCL-2 0.0154651215025885 -0.274752902508333 0.11035989824909 4 LCK|LCK 0.0083448760692046 -0.276651203075 0.0863574661968371 4 FOXO3|FOXO3A 0.00281482007338617 -0.29286113645 0.060049494898905 4 BAD|BAD_PS112 0.01707172356061 -0.301354280858333 0.111301661947805 4 MAPK1 MAPK3|MAPK_PT202_Y204 0.0155193606912783 -0.303001508316667 0.11035989824909 4 RPS6KB1|P70S6K_PT389 0.0015223161234128 -0.305230707266667 0.060049494898905 4 RAD51|RAD51 0.0425429368016909 -0.306963824483333 0.183935738572702 4 ESR1|ER-ALPHA 0.00376693632507995 -0.35697215 0.072325177441535 4 PRKCD|PKC-DELTA_PS664 0.0102559596819508 -0.370001543416667 0.092036897328891 4 SRC|SRC_PY416 0.00791042844906282 -0.381879529158333 0.0863574661968371 4 NFKB1|NF-KB-P65_PS536 0.00265588112456867 -0.409426068975 0.060049494898905 4 CDH1|E-CADHERIN 0.0083559211518399 -0.486837075816667 0.0863574661968371 4 MAPK14|P38_PT180_Y182 0.0386309630559044 -0.499504870741667 0.180905973334967 4 PKC|PKC-PAN_BETAII_PS660 0.0126364034877933 -0.518608896108333 0.101091227902346 4 ANXA1|ANNEXIN-1 3.74863267193757e-05 -0.541838433308333 0.00719737473012013 4 CDKN1A|P21 0.0276157243513961 -0.5915261818 0.165694346108377 4 SRC|SRC_PY527 0.0477938681372091 -0.605807355125 0.183935738572702 4 PRKCA |PKC-ALPHA_PS657 0.0140471752640564 -1.06068863085833 0.107882306027953 4 NDRG1|NDRG1_PT346 0.00477528171840855 -1.40632133545833 0.0764045074945368 4